prot_S-firma_F_contig10188.292.1 (polypeptide) Sphaerotrichia firma ET2_F female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_F_contig10188.292.1
Unique Nameprot_S-firma_F_contig10188.292.1
Typepolypeptide
OrganismSphaerotrichia firma ET2_F female (Sphaerotrichia firma ET2_F female)
Sequence length187
Homology
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BLAST of mRNA_S-firma_F_contig10188.292.1 vs. uniprot
Match: A0A6H5JTZ9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTZ9_9PHAE)

HSP 1 Score: 53.1 bits (126), Expect = 7.640e-5
Identity = 56/139 (40.29%), Postives = 72/139 (51.80%), Query Frame = 0 
Query:   11 DGTGGGSGGTSLYSDQESGRGDLSTPSSKSSMSTGYESSAMGKPPSTAADSNRGDSAWERGSERQKSMGVGPAPAAADDSPSQDG--GAEDDGSYAYPPPSPSSSFSVPLAGGRKSDESMTQLERSALERKAYYEAHAA 147
            DG+GG S  TS+YSD+E   GDLS  SS+ S+STGYESSA GK                 GS+ ++     P     +D    DG  G  D  S  Y PPSP+     P  G +  D  +++LE SA+ +KAYYE  AA
Sbjct:  870 DGSGGSSACTSMYSDEEE-DGDLS--SSRFSISTGYESSARGK-----------------GSQPRQ-----PGTPTGEDQSQHDGDAGGRDRASDTYAPPSPAWPLQHPPVG-QTPDAVLSELEISAVTKKAYYEIQAA 982
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10188.292.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JTZ9_9PHAE7.640e-540.29Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_F_contig10188contigS-firma_F_contig10188:187..5351 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma female2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma ET2_F female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_F_contig10188.292.1mRNA_S-firma_F_contig10188.292.1Sphaerotrichia firma ET2_F femalemRNAS-firma_F_contig10188 187..5353 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_F_contig10188.292.1 ID=prot_S-firma_F_contig10188.292.1|Name=mRNA_S-firma_F_contig10188.292.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=187bp
GDGSGGEVWSDGTGGGSGGTSLYSDQESGRGDLSTPSSKSSMSTGYESSA
MGKPPSTAADSNRGDSAWERGSERQKSMGVGPAPAAADDSPSQDGGAEDD
GSYAYPPPSPSSSFSVPLAGGRKSDESMTQLERSALERKAYYEAHAAPAA
AAVTETARTVATASAVRTPSNAGSELQPTSSVPSGST
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