prot_S-firma_F_contig10187.290.1 (polypeptide) Sphaerotrichia firma ET2_F female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_F_contig10187.290.1
Unique Nameprot_S-firma_F_contig10187.290.1
Typepolypeptide
OrganismSphaerotrichia firma ET2_F female (Sphaerotrichia firma ET2_F female)
Sequence length159
Homology
BLAST of mRNA_S-firma_F_contig10187.290.1 vs. uniprot
Match: D8LH69_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH69_ECTSI)

HSP 1 Score: 202 bits (514), Expect = 4.770e-63
Identity = 149/151 (98.68%), Postives = 149/151 (98.68%), Query Frame = 0
Query:    8 DEGGAGRGRDRLQLLLKEQGDVNLDDVKKYDDAXXXXXXXXXXXXXXXXXXXXXXXALEKELEKIRKEREXXXXXXXXXXXXXXXXRKQEAAMTGNILLTQSNSSSQVKRRWNDDVVFKGQARTEPETKKRFVNDTIRNDFHRRFLTKYIK 158
            DEGGAGRGRDRLQLLLKEQGDVNLDDVKKYDD  XXXXXXXXXXXXXXXXXXXXXXALEKELEKIRKEREXXXXXXXXXXXXXXXXRKQEAAMTGNILLTQSNSSSQVKRRWNDDVVFKGQARTEPETKKRFVNDTIRNDFHRRFLTKYIK
Sbjct:   85 DEGGAGRGRDRLQLLLKEQGDVNLDDVKKYDDEDXXXXXXXXXXXXXXXXXXXXXXALEKELEKIRKEREXXXXXXXXXXXXXXXXRKQEAAMTGNILLTQSNSSSQVKRRWNDDVVFKGQARTEPETKKRFVNDTIRNDFHRRFLTKYIK 235          
BLAST of mRNA_S-firma_F_contig10187.290.1 vs. uniprot
Match: A0A836C8J3_9STRA (Pre-mRNA-splicing factor Cwf15/Cwc15 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8J3_9STRA)

HSP 1 Score: 114 bits (286), Expect = 1.150e-28
Identity = 75/95 (78.95%), Postives = 85/95 (89.47%), Query Frame = 0
Query:   64 ALEKELEKIRKEREXXXXXXXXXXXXXXXXRKQEAAMTGNILLTQSNSSSQVKRRWNDDVVFKGQARTEPETKKRFVNDTIRNDFHRRFLTKYIK 158
            AL+KELEKIR+   XXXXXXXXXXXXXXXX  QEAAM+GN+LL+ + S+SQVKRRWNDDVVFKGQARTEP+ KKRFVNDTIR+DFHR FL KY+K
Sbjct:  141 ALQKELEKIRRXXXXXXXXXXXXXXXXXXXXXQEAAMSGNVLLSMAQSTSQVKRRWNDDVVFKGQARTEPQVKKRFVNDTIRSDFHRSFLKKYVK 235          
BLAST of mRNA_S-firma_F_contig10187.290.1 vs. uniprot
Match: A0A7S2FJV3_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FJV3_9STRA)

HSP 1 Score: 105 bits (263), Expect = 2.930e-25
Identity = 55/94 (58.51%), Postives = 64/94 (68.09%), Query Frame = 0
Query:   65 LEKELEKIRKEREXXXXXXXXXXXXXXXXRKQEAAMTGNILLTQSNSSSQVKRRWNDDVVFKGQARTEPETKKRFVNDTIRNDFHRRFLTKYIK 158
            L++ELEKI+ ERE                   +AA+ GN L+  +  SSQVKR+WNDDVVFK QARTEPE KKRFVNDTIRNDFHRRFL K+ K
Sbjct:  140 LQRELEKIKAEREKVRLEKEAEEAAIAEKTASDAALLGNPLMLGATKSSQVKRKWNDDVVFKNQARTEPEAKKRFVNDTIRNDFHRRFLAKFAK 233          
BLAST of mRNA_S-firma_F_contig10187.290.1 vs. uniprot
Match: A0A0W8DQM5_PHYNI (Uncharacterized protein n=1 Tax=Phytophthora nicotianae TaxID=4790 RepID=A0A0W8DQM5_PHYNI)

HSP 1 Score: 100 bits (249), Expect = 1.040e-23
Identity = 64/93 (68.82%), Postives = 77/93 (82.80%), Query Frame = 0
Query:   65 LEKELEKIRKEREXXXXXXXXXXXXXXXXRKQEAAMTGNILLTQSNSSSQVKRRWNDDVVFKGQARTEPETKKRFVNDTIRNDFHRRFLTKYI 157
            L +ELEKI++EREXXXXXXXXXXXXX   + +E  + GN L  Q+  S+++KRRWNDDVVFK Q+R EPE KKRF+NDTIRNDFHRRFL+KYI
Sbjct:   88 LMRELEKIKQEREXXXXXXXXXXXXXAEQQSREEILQGNPLTQQAADSAKMKRRWNDDVVFKNQSRNEPEVKKRFINDTIRNDFHRRFLSKYI 180          
BLAST of mRNA_S-firma_F_contig10187.290.1 vs. uniprot
Match: A0A484DTU6_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DTU6_BRELC)

HSP 1 Score: 97.8 bits (242), Expect = 1.710e-22
Identity = 49/94 (52.13%), Postives = 64/94 (68.09%), Query Frame = 0
Query:   65 LEKELEKIRKEREXXXXXXXXXXXXXXXXRKQEAAMTGNILLTQSNSSSQVKRRWNDDVVFKGQARTEPETKKRFVNDTIRNDFHRRFLTKYIK 158
            L +ELEKI++ERE                + ++  + GN L  Q   S+++KRRWNDDVVFK Q+R EP+ KKRF+NDTIRNDFHRRFL+KYI+
Sbjct:  104 LMRELEKIKQEREAERLQKEEADRKVVEQQSRDEILQGNPLTQQGVGSAKMKRRWNDDVVFKNQSRNEPDVKKRFINDTIRNDFHRRFLSKYIQ 197          
BLAST of mRNA_S-firma_F_contig10187.290.1 vs. uniprot
Match: A0A7S2KSM4_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2KSM4_9STRA)

HSP 1 Score: 97.4 bits (241), Expect = 1.330e-21
Identity = 54/101 (53.47%), Postives = 68/101 (67.33%), Query Frame = 0
Query:   64 ALEKELEKIRKEREXXXXXXXXXXXXXXXXRKQEAAMTGNILLTQS-----NSSSQVKRRWNDDVVFKGQARTEPE-TKKRFVNDTIRNDFHRRFLTKYIK 158
            AL+ EL KIR+ER                 + +EAA+TGN LL  S     +SS +VKRRWNDDVVF+ QA+TEP+  KKRF+NDT+RNDFH+RFL K+IK
Sbjct:  180 ALQAELAKIRQERAAANAKEEAEAAAVEQAQMEEAALTGNPLLNSSAGATGSSSGRVKRRWNDDVVFRNQAKTEPDQNKKRFINDTVRNDFHKRFLNKFIK 280          
BLAST of mRNA_S-firma_F_contig10187.290.1 vs. uniprot
Match: D0NV69_PHYIT (Uncharacterized protein n=23 Tax=Peronosporaceae TaxID=4777 RepID=D0NV69_PHYIT)

HSP 1 Score: 95.5 bits (236), Expect = 3.330e-21
Identity = 51/94 (54.26%), Postives = 63/94 (67.02%), Query Frame = 0
Query:   65 LEKELEKIRKEREXXXXXXXXXXXXXXXXRKQEAAMTGNILLTQSNS-SSQVKRRWNDDVVFKGQARTEPETKKRFVNDTIRNDFHRRFLTKYI 157
            L +ELEKI++ERE                + +E  + GN L  Q  + S+++KRRWNDDVVFK Q+R EPE KKRF+NDTIRNDFHRRFL KYI
Sbjct:  145 LMRELEKIKQEREEERLRKEEEARKTVELQSREEILQGNPLTQQQAAGSAKMKRRWNDDVVFKNQSRNEPEVKKRFINDTIRNDFHRRFLNKYI 238          
BLAST of mRNA_S-firma_F_contig10187.290.1 vs. uniprot
Match: A0A067BVG0_SAPPC (Uncharacterized protein n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067BVG0_SAPPC)

HSP 1 Score: 94.4 bits (233), Expect = 8.680e-21
Identity = 79/149 (53.02%), Postives = 93/149 (62.42%), Query Frame = 0
Query:   14 RGRDRLQLLLK--EQGDVNLDDVKKYDDAXXXXXXXXXXXXXXXXXXXXXXXALEKELEKIRKEREXXXXXXXXXXXXXXXXRKQEAAMTGNILLTQSN--SSSQVKRRWNDDVVFKGQARTEPETKKRFVNDTIRNDFHRRFLTKYIK 158
            R +D   LLLK  E  D   D   KYDDA      XXXXXXXXXXXXXXX   L +ELEKI++ERE         XX     R ++  + GN L +      S+ +KR+WNDDVVFK Q+R EPE KKRF+NDTIRNDFHRRFL  YI+
Sbjct:   88 RLKDNKTLLLKGDEWEDRAKDVQTKYDDADDDVGDXXXXXXXXXXXXXXXEAELMRELEKIKREREEERLRKEQAXXDEEEKRAKDEVLMGNPLTSAMAPAGSATIKRKWNDDVVFKNQSRNEPELKKRFINDTIRNDFHRRFLKAYIQ 236          
BLAST of mRNA_S-firma_F_contig10187.290.1 vs. uniprot
Match: A0A024U4X4_9STRA (Uncharacterized protein n=5 Tax=Aphanomyces TaxID=100860 RepID=A0A024U4X4_9STRA)

HSP 1 Score: 94.4 bits (233), Expect = 9.980e-21
Identity = 51/98 (52.04%), Postives = 63/98 (64.29%), Query Frame = 0
Query:   65 LEKELEKIRKEREXXXXXXXXXXXXXXXXRKQEAAMTGNILLTQSNS----SSQVKRRWNDDVVFKGQARTEPETKKRFVNDTIRNDFHRRFLTKYIK 158
            L +ELEKI+KERE                 ++E  + GN L +Q +     S+ +KR+WNDDVVFK Q R EPETKKRF+NDTIRNDFHRRFL  YI+
Sbjct:  146 LMRELEKIKKEREEERLKKEAADRDAEESLRKEEILLGNPLTSQQSKNPTGSATIKRKWNDDVVFKNQTRHEPETKKRFINDTIRNDFHRRFLKTYIQ 243          
BLAST of mRNA_S-firma_F_contig10187.290.1 vs. uniprot
Match: A0A3F2RN91_9STRA (Uncharacterized protein n=4 Tax=Peronosporaceae TaxID=4777 RepID=A0A3F2RN91_9STRA)

HSP 1 Score: 94.0 bits (232), Expect = 1.290e-20
Identity = 80/126 (63.49%), Postives = 93/126 (73.81%), Query Frame = 0
Query:   34 VKKYDDAXXXXXXXXXXXXXXXXXXXXXXXALEKELEKIRKEREXXXXXXXXXXXXXXXXRKQEAAMTGNILLTQSNS-SSQVKRRWNDDVVFKGQARTEPETKKRFVNDTIRNDFHRRFLTKYIK 158
              KYDDA        XXXXXXXXXXXXXX  L +ELEKI++E  XXXXXXXXXXXX    + +E  + GN L  Q  + S+++KRRWNDDVVFK Q+R EPE KKRF+NDTIRNDFHRRFL KYI+
Sbjct:  114 ASKYDDADDGGDSDGXXXXXXXXXXXXXXAELMRELEKIKQEXXXXXXXXXXXXXXVAEQQSREEVLQGNPLTQQQTAGSAKMKRRWNDDVVFKNQSRNEPEVKKRFINDTIRNDFHRRFLNKYIQ 239          
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10187.290.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LH69_ECTSI4.770e-6398.68Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A836C8J3_9STRA1.150e-2878.95Pre-mRNA-splicing factor Cwf15/Cwc15 n=1 Tax=Tribo... [more]
A0A7S2FJV3_9STRA2.930e-2558.51Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A0W8DQM5_PHYNI1.040e-2368.82Uncharacterized protein n=1 Tax=Phytophthora nicot... [more]
A0A484DTU6_BRELC1.710e-2252.13Uncharacterized protein n=1 Tax=Bremia lactucae Ta... [more]
A0A7S2KSM4_9STRA1.330e-2153.47Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]
D0NV69_PHYIT3.330e-2154.26Uncharacterized protein n=23 Tax=Peronosporaceae T... [more]
A0A067BVG0_SAPPC8.680e-2153.02Uncharacterized protein n=3 Tax=Saprolegniaceae Ta... [more]
A0A024U4X4_9STRA9.980e-2152.04Uncharacterized protein n=5 Tax=Aphanomyces TaxID=... [more]
A0A3F2RN91_9STRA1.290e-2063.49Uncharacterized protein n=4 Tax=Peronosporaceae Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 55..101
IPR006973Pre-mRNA-splicing factor Cwf15/Cwc15PFAMPF04889Cwf_Cwc_15coord: 15..158
e-value: 1.8E-45
score: 155.6
IPR006973Pre-mRNA-splicing factor Cwf15/Cwc15PANTHERPTHR12718CELL CYCLE CONTROL PROTEIN CWF15coord: 29..158

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_F_contig10187contigS-firma_F_contig10187:608..1952 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma female2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma ET2_F female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_F_contig10187.290.1mRNA_S-firma_F_contig10187.290.1Sphaerotrichia firma ET2_F femalemRNAS-firma_F_contig10187 258..2479 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_F_contig10187.290.1 ID=prot_S-firma_F_contig10187.290.1|Name=mRNA_S-firma_F_contig10187.290.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=159bp
MCSKQLEDEGGAGRGRDRLQLLLKEQGDVNLDDVKKYDDADDADSGDDLD
SSDSDDDSDDDEEALEKELEKIRKEREEARKKKEREEAEDEEKRKQEAAM
TGNILLTQSNSSSQVKRRWNDDVVFKGQARTEPETKKRFVNDTIRNDFHR
RFLTKYIK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006973Cwf_Cwc_15