prot_S-firma_F_contig10155.262.1 (polypeptide) Sphaerotrichia firma ET2_F female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_F_contig10155.262.1
Unique Nameprot_S-firma_F_contig10155.262.1
Typepolypeptide
OrganismSphaerotrichia firma ET2_F female (Sphaerotrichia firma ET2_F female)
Sequence length157
Homology
BLAST of mRNA_S-firma_F_contig10155.262.1 vs. uniprot
Match: A0A6H5JX21_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JX21_9PHAE)

HSP 1 Score: 169 bits (427), Expect = 4.140e-50
Identity = 88/157 (56.05%), Postives = 107/157 (68.15%), Query Frame = 0
Query:    1 LLAEGRQSRADKRVSGGSAKLHRCTGAVIVDKVKGATGCPVLIRACKQKTKEWRVTAVCLDHTACTGQSGATQRRPSRKVVAAEYGALVNGNHDISSAALSKTLKATGGGDFPERTANRMRHDVLGKSKKQIAEQYQYLHSYLESLKGTNGNIVECE 157
            +++  RQ R DKRVSGG  KLHRCTGAVI    K  +GCPVL RACK     W+VT V LDH ACTGQ+G  ++R +R+ V  E  ALV+ N  I+  AL+KTLKAT G D  ERTA RMR D+LGK K  IA++YQ L SY + L   NGN+VEC+
Sbjct:   47 MISTSRQCRLDKRVSGGRGKLHRCTGAVING--KATSGCPVLARACKLHDGTWKVTEVVLDHVACTGQAGNKKQRINRRCVEEEAAALVSSNRSITCPALAKTLKATSGVDISERTAGRMRADILGKGKDTIAKEYQLLQSYCDLLGRDNGNVVECK 201          
BLAST of mRNA_S-firma_F_contig10155.262.1 vs. uniprot
Match: D7FZQ7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZQ7_ECTSI)

HSP 1 Score: 165 bits (418), Expect = 2.510e-49
Identity = 85/157 (54.14%), Postives = 107/157 (68.15%), Query Frame = 0
Query:    1 LLAEGRQSRADKRVSGGSAKLHRCTGAVIVDKVKGATGCPVLIRACKQKTKEWRVTAVCLDHTACTGQSGATQRRPSRKVVAAEYGALVNGNHDISSAALSKTLKATGGGDFPERTANRMRHDVLGKSKKQIAEQYQYLHSYLESLKGTNGNIVECE 157
            ++++ RQ R DKRVSGG  KLHRCTGA+I    K  +GCPV  R CKQ    W+VT V LDH ACTGQ+G  ++R +R+ V  E  ALV+ NH I+  +L KTLKAT G D  ER+A+RMR D+LGK K  IA++YQ L S  + L   NGNIVEC+
Sbjct:    1 MISQSRQCRLDKRVSGGRGKLHRCTGAIING--KATSGCPVRARGCKQTDGTWKVTEVVLDHVACTGQAGNKKQRINRRCVEGEAAALVSANHSITCPSLVKTLKATSGVDVSERSASRMRADILGKGKDAIAKEYQLLQSSCDLLGRDNGNIVECQ 155          
BLAST of mRNA_S-firma_F_contig10155.262.1 vs. uniprot
Match: A0A6H5L4I0_9PHAE (SWIM-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4I0_9PHAE)

HSP 1 Score: 169 bits (427), Expect = 2.470e-46
Identity = 88/157 (56.05%), Postives = 107/157 (68.15%), Query Frame = 0
Query:    1 LLAEGRQSRADKRVSGGSAKLHRCTGAVIVDKVKGATGCPVLIRACKQKTKEWRVTAVCLDHTACTGQSGATQRRPSRKVVAAEYGALVNGNHDISSAALSKTLKATGGGDFPERTANRMRHDVLGKSKKQIAEQYQYLHSYLESLKGTNGNIVECE 157
            +++  RQ R DKRVSGG  KLHRCTGAVI    K  +GCPVL RACK     W+VT V LDH ACTGQ+G  ++R +R+ V  E  ALV+ N  I+  AL+KTLKAT G D  ERTA RMR D+LGK K  IA++YQ L SY + L   NGN+VEC+
Sbjct:   47 MISTSRQCRLDKRVSGGRGKLHRCTGAVING--KATSGCPVLARACKLHDGTWKVTEVVLDHVACTGQAGNKKQRINRRCVEEEAAALVSSNRSITCPALAKTLKATSGVDISERTAGRMRADILGKGKDTIAKEYQLLQSYCDLLGRDNGNVVECK 201          
BLAST of mRNA_S-firma_F_contig10155.262.1 vs. uniprot
Match: A0A6H5KQC0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQC0_9PHAE)

HSP 1 Score: 158 bits (399), Expect = 6.730e-45
Identity = 81/156 (51.92%), Postives = 103/156 (66.03%), Query Frame = 0
Query:    1 LLAEGRQSRADKRVSGGSAKLHRCTGAVIVDKVKGATGCPVLIRACKQKTKEWRVTAVCLDHTACTGQSGATQRRPSRKVVAAEYGALVNGNHDISSAALSKTLKATGGGDFPERTANRMRHDVLGKSKKQIAEQYQYLHSYLESLKGTNGNIVEC 156
            ++++ RQ R DKR SGG +KLHRCTGA+I    K  +GCPV  R CKQ    W+VT   LDH ACTGQ+G  ++  +R+ V  +  ALV+ NH I+  +L KTLKAT G D  ERTA RMR D+LGK    IA++YQ L +Y + L   NGNIVEC
Sbjct:    1 MISQSRQCRLDKRDSGGRSKLHRCTGAIING--KATSGCPVRARGCKQTDGTWKVTEAVLDHVACTGQAGNKKQGINRRCVEKQAAALVSANHSITCPSLVKTLKATSGVDISERTAGRMRVDILGKGNDAIAKEYQLLQNYCDLLGRDNGNIVEC 154          
BLAST of mRNA_S-firma_F_contig10155.262.1 vs. uniprot
Match: A0A6H5J5Y0_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J5Y0_9PHAE)

HSP 1 Score: 154 bits (390), Expect = 1.660e-43
Identity = 80/151 (52.98%), Postives = 101/151 (66.89%), Query Frame = 0
Query:    1 LLAEGRQSRADKRVSGGSAKLHRCTGAVIVDKVKGATGCPVLIRACKQKTKEWRVTAVCLDHTACTGQSGATQRRPSRKVVAAEYGALVNGNHDISSAALSKTLKATGGGDFPERTANRMRHDVLGKSKKQIAEQYQYLHSYLESLKGTNG 151
            ++A+ RQ R DKR+ GG  KLHRCTGA++    K  +GCPVL R CKQ    W+VT V LDH ACTGQ+   ++R +R+ V  E  ALV+ NH I+  +L KTLKAT G D  ERTA+RMR D+LGK K  IA++YQ L SY + L   NG
Sbjct:  155 MIAQSRQCRLDKRIIGGRGKLHRCTGAIVNG--KATSGCPVLARGCKQTDGTWKVTEVVLDHVACTGQASNKKQRINRRCVEREAAALVSANHRITCPSLVKTLKATSGVDVSERTASRMRADILGKGKDAIAKEYQLLQSYCDLLGRDNG 303          
BLAST of mRNA_S-firma_F_contig10155.262.1 vs. uniprot
Match: A0A6H5L768_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L768_9PHAE)

HSP 1 Score: 129 bits (323), Expect = 2.160e-33
Identity = 70/139 (50.36%), Postives = 88/139 (63.31%), Query Frame = 0
Query:   19 AKLHRCTGAVIVDKVKGATGCPVLIRACKQKTKEWRVTAVCLDHTACTGQSGATQRRPSRKVVAAEYGALVNGNHDISSAALSKTLKATGGGDFPERTANRMRHDVLGKSKKQIAEQYQYLHSYLESLKGTNGNIVECE 157
            A  H CTGA++    K  +GCPV  R CKQ    W+V  V LDH A TGQ+G  ++R +R+ V  E   LV+ NH I+  +L KTLKAT G D  ERTA+RMR D+LGK K  IA++YQ L SY + L   N NIVEC+
Sbjct:   16 AARHYCTGAIVNG--KATSGCPVRARGCKQTDGTWKVMDVVLDHVARTGQAGNKKQRINRRCVEGEATGLVSANHRITCPSLVKTLKATSGVDVSERTASRMRADILGKGKDAIAKEYQLLQSYGDLLGRDNRNIVECK 152          
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10155.262.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A6H5JX21_9PHAE4.140e-5056.05Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FZQ7_ECTSI2.510e-4954.14Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L4I0_9PHAE2.470e-4656.05SWIM-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5KQC0_9PHAE6.730e-4551.92Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5J5Y0_9PHAE1.660e-4352.98Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5L768_9PHAE2.160e-3350.36Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_F_contig10155contigS-firma_F_contig10155:534..1004 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma female2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma ET2_F female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_F_contig10155.262.1mRNA_S-firma_F_contig10155.262.1Sphaerotrichia firma ET2_F femalemRNAS-firma_F_contig10155 534..1004 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_F_contig10155.262.1 ID=prot_S-firma_F_contig10155.262.1|Name=mRNA_S-firma_F_contig10155.262.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=157bp
LLAEGRQSRADKRVSGGSAKLHRCTGAVIVDKVKGATGCPVLIRACKQKT
KEWRVTAVCLDHTACTGQSGATQRRPSRKVVAAEYGALVNGNHDISSAAL
SKTLKATGGGDFPERTANRMRHDVLGKSKKQIAEQYQYLHSYLESLKGTN
GNIVECE
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