prot_S-firma_F_contig10131.231.1 (polypeptide) Sphaerotrichia firma ET2_F female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_F_contig10131.231.1
Unique Nameprot_S-firma_F_contig10131.231.1
Typepolypeptide
OrganismSphaerotrichia firma ET2_F female (Sphaerotrichia firma ET2_F female)
Sequence length217
Homology
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BLAST of mRNA_S-firma_F_contig10131.231.1 vs. uniprot
Match: D7G3Z9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3Z9_ECTSI)

HSP 1 Score: 259 bits (662), Expect = 7.040e-85
Identity = 146/215 (67.91%), Postives = 164/215 (76.28%), Query Frame = 0 
Query:    1 MSTDLSASATPAKDGTSAASAPAXXXXXXXXXXRPKAASTVANTANQILFKNELYTSMKQKTMDNELMTKINRGAQEKEQRKFEHAKAAVARLETKQKVLIGVGDMLGPPGCDPSAYSSASIAVALSPLDTVRDVKKKLIAAAGWEDELPSDFGLFDDVSEEPLKDGQAIEAAMAPGKPLSAGKAASRRGGGGGRAVSSIRMPRPYVGVLWAARL 215
            MSTD SASA   KD     + PA              A++VA+TANQILFKNELYTSMKQKTMD ELM + NR A E+E+RKFE A+A VARLE K+KVLIGVGDM+GPPGCDPS  SSAS+AV L   DTVRDVKK+LIA AGW DELPSDFGLF+DVSEEPL DGQ+I+AA+AP KP SA K  SRRGG    A +SIR+PRPYVGVLWAARL
Sbjct:    1 MSTDASASAPVVKDAAPVNAVPALAAGTPAATG----ANSVASTANQILFKNELYTSMKQKTMDQELMARFNREAHEEEKRKFEKARAKVARLENKRKVLIGVGDMVGPPGCDPSECSSASVAVDLGLQDTVRDVKKRLIAEAGWRDELPSDFGLFNDVSEEPLMDGQSIDAALAPSKPSSAKKGVSRRGGSRATAAASIRLPRPYVGVLWAARL 211
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BLAST of mRNA_S-firma_F_contig10131.231.1 vs. uniprot
Match: A0A6H5K1B8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1B8_9PHAE)

HSP 1 Score: 177 bits (449), Expect = 1.170e-53
Identity = 87/118 (73.73%), Postives = 101/118 (85.59%), Query Frame = 0 
Query:   98 KVLIGVGDMLGPPGCDPSAYSSASIAVALSPLDTVRDVKKKLIAAAGWEDELPSDFGLFDDVSEEPLKDGQAIEAAMAPGKPLSAGKAASRRGGGGGRAVSSIRMPRPYVGVLWAARL 215
            +VLIGVGDM+GPPGCDPS YSSAS+AV + P DTV DVKK+LIA AGW DELPSDFGLF+DVS+EPL DGQ+++AA+AP KP S+ KA SRRGG    A +SIR+PRPYVGVLWAARL
Sbjct:   15 QVLIGVGDMVGPPGCDPSEYSSASVAVDVGPQDTVWDVKKRLIAVAGWTDELPSDFGLFNDVSDEPLMDGQSVDAALAPNKPSSSKKAVSRRGGSRATAAASIRLPRPYVGVLWAARL 132
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10131.231.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G3Z9_ECTSI7.040e-8567.91Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K1B8_9PHAE1.170e-5373.73Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 76..96

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_F_contig10131contigS-firma_F_contig10131:3767..5245 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma female2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma ET2_F female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_F_contig10131.231.1mRNA_S-firma_F_contig10131.231.1Sphaerotrichia firma ET2_F femalemRNAS-firma_F_contig10131 3759..5245 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_F_contig10131.231.1 ID=prot_S-firma_F_contig10131.231.1|Name=mRNA_S-firma_F_contig10131.231.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=217bp
MSTDLSASATPAKDGTSAASAPAAAAGPPAAVERPKAASTVANTANQILF
KNELYTSMKQKTMDNELMTKINRGAQEKEQRKFEHAKAAVARLETKQKVL
IGVGDMLGPPGCDPSAYSSASIAVALSPLDTVRDVKKKLIAAAGWEDELP
SDFGLFDDVSEEPLKDGQAIEAAMAPGKPLSAGKAASRRGGGGGRAVSSI
RMPRPYVGVLWAARLT*
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