prot_S-firma_F_contig10126.221.1 (polypeptide) Sphaerotrichia firma ET2_F female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_F_contig10126.221.1
Unique Nameprot_S-firma_F_contig10126.221.1
Typepolypeptide
OrganismSphaerotrichia firma ET2_F female (Sphaerotrichia firma ET2_F female)
Sequence length757
Homology
BLAST of mRNA_S-firma_F_contig10126.221.1 vs. uniprot
Match: A0A6H5KJ58_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJ58_9PHAE)

HSP 1 Score: 254 bits (648), Expect = 5.220e-71
Identity = 302/645 (46.82%), Postives = 342/645 (53.02%), Query Frame = 0
Query:    1 MFSSGSDCSPRPEREYARGLSALASTMGDIFESSGG---ATVPVMSPVHGQMTSSNSGLGEPTMLIDGEPASVSPPRHGEPA--------VEQPSKPFSEVEPP-----RSSRARVANGGVGVGAGGASGPTARGL--------------------ENAGGGAHTSASGDGXXXXXXXXXXXXXXLLPLPAGEIEIPGVPNGA-----------------GEEPLQGGSSSGNXXXXXXXXXXXXXXXGRPLPAEEPNAEFSKGFKSNKRRHVP-TPKHR-LPTAWGTLPGAAGDTANADGEDGQGEEGQQDAGDLRDSQSSSDFNSGSNKAVSDSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPAPPAPQVPIDFS-----NNDLPA-SDLLSEFDSNTTWAGASAISVATTRTGTGWGSVLDTSSALSQYPSSHLSTTAAKLDAAAVWTQQPLGKGGDLNGVSVTT-ANRRSRGRASPPHNLRVPGGTPARRGVRNRKQD----------------------KMS-AXXXXXXXXXXXXALAKPTTTSRRAAMSPHGVAMDAAIRIVEERGARLGIVREEKEDAAAQAAAA--------NSSDQAKDAAYANQIAAPAMTSLEQRRQRAKAWAKS 552
            MFSSGS+ SPR  R+Y RG S++ STM D FES+G    A  P+MSPV   + S+ SGL E  M++  E   + P   G+               + F  +EPP     RS+ AR  +G              RG                     ENA GGAH +                    LPLP   +  PGVP+G                  G            XXXXXXXXXXXXX  GRPL  E  N + S   K NKRRH P TP HR L  AWG L                                                XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX     AP VP +F+     N D+PA SDLLSEFDSNTTWAGASA+SVATTRT  G+ S+++TSSALSQYPSS+ STTAAKLD A VW ++  GK GDLNGVSVTT ANRRSRGRASP HNLRV GGTPARRGVR  K D                      KMS +             L +PT+T RRAAMSPHGVAMDAA+R+VEERGARLGIVREEKE                 N S++A++AAYANQIAAPAMTSLEQRRQRAKAWA S
Sbjct:    1 MFSSGSEGSPRNGRDYGRGTSSVTSTMDDAFESTGTVVRADGPLMSPVLRTLASAGSGLAE-GMMMPVEEVPILPDPAGDTKGLVVAALRAAGRGQQFVPLEPPDMEAPRSTAARAHHG--------------RGRLKQQXXXXXXXXXSDMSETSENAEGGAHLTGG------------------LPLPVDSVG-PGVPDGGVDGRRGFPQRKKKTSNIGGXXXXXXXXXXXXXXXXXXXXXXXXRRGRPLSEEPENDDASATVKGNKRRHAPPTPNHRVLSGAWGKLAAPERPAXXXXXXXXXXXXXX-----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPSVPNEFAGDADDNVDIPAASDLLSEFDSNTTWAGASALSVATTRTA-GYSSLIETSSALSQYPSSYRSTTAAKLDNAGVWCEESQGKNGDLNGVSVTTTANRRSRGRASPSHNLRVIGGTPARRGVRKAKPDNXXXXXXXXXRGTXXXGTRVNGKMSGSGGDSGSNSGRPRTLVRPTSTPRRAAMSPHGVAMDAALRMVEERGARLGIVREEKEGDGXXXXXXXXXXXXXXNRSEKAREAAYANQIAAPAMTSLEQRRQRAKAWALS 605          
BLAST of mRNA_S-firma_F_contig10126.221.1 vs. uniprot
Match: D7G4N6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4N6_ECTSI)

HSP 1 Score: 119 bits (297), Expect = 8.180e-28
Identity = 73/96 (76.04%), Postives = 78/96 (81.25%), Query Frame = 0
Query:  466 LAKPTTTSRRAAMSPHGVAMDAAIRIVEERGARLGIVREEKEDAAAQAAAA--------NSSDQAKDAAYANQIAAPAMTSLEQRRQRAKAWAKSR 553
            LA+PTTT RRAAMSPHGVAMDAAIRIVEERGARLGIVREEKE                 NSS++A++AAYANQIAAPAMTSLEQRRQRAKAWAKSR
Sbjct:   18 LARPTTTPRRAAMSPHGVAMDAAIRIVEERGARLGIVREEKEGDGXXXXXXXXXXXXXXNSSERAREAAYANQIAAPAMTSLEQRRQRAKAWAKSR 113          
BLAST of mRNA_S-firma_F_contig10126.221.1 vs. uniprot
Match: D7G4N7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4N7_ECTSI)

HSP 1 Score: 63.9 bits (154), Expect = 1.010e-6
Identity = 45/77 (58.44%), Postives = 48/77 (62.34%), Query Frame = 0
Query:  637 SSSGSEADIGGNPRYEGGVTPARSRRSAXXXXXXXXXXXXSYRSS---GGXXXXXXRAPPLPRGTARDRHATPARDR 710
            SSSGSE DIG NP  EG VTPARSRRS+            S RS    G       RAPPLPRGTARDRH+TPAR+R
Sbjct:   60 SSSGSEGDIG-NPSREG-VTPARSRRSSRSLSGTTPARHRSSRSITSIGSGGTAGGRAPPLPRGTARDRHSTPARER 134          
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10126.221.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5KJ58_9PHAE5.220e-7146.82Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G4N6_ECTSI8.180e-2876.04Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G4N7_ECTSI1.010e-658.44Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_F_contig10126contigS-firma_F_contig10126:662..5402 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma female2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma ET2_F female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_F_contig10126.221.1mRNA_S-firma_F_contig10126.221.1Sphaerotrichia firma ET2_F femalemRNAS-firma_F_contig10126 463..5402 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_F_contig10126.221.1 ID=prot_S-firma_F_contig10126.221.1|Name=mRNA_S-firma_F_contig10126.221.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=757bp
MFSSGSDCSPRPEREYARGLSALASTMGDIFESSGGATVPVMSPVHGQMT
SSNSGLGEPTMLIDGEPASVSPPRHGEPAVEQPSKPFSEVEPPRSSRARV
ANGGVGVGAGGASGPTARGLENAGGGAHTSASGDGHHRQQRHQPGGGGGL
LPLPAGEIEIPGVPNGAGEEPLQGGSSSGNGSSISPSSASARRRRGRPLP
AEEPNAEFSKGFKSNKRRHVPTPKHRLPTAWGTLPGAAGDTANADGEDGQ
GEEGQQDAGDLRDSQSSSDFNSGSNKAVSDSGGTTAATSAAGNNNKRAAA
AAAAAASADALLAPPPAPAPPAPQVPIDFSNNDLPASDLLSEFDSNTTWA
GASAISVATTRTGTGWGSVLDTSSALSQYPSSHLSTTAAKLDAAAVWTQQ
PLGKGGDLNGVSVTTANRRSRGRASPPHNLRVPGGTPARRGVRNRKQDKM
SAAGGGGDDSSKPRALAKPTTTSRRAAMSPHGVAMDAAIRIVEERGARLG
IVREEKEDAAAQAAAANSSDQAKDAAYANQIAAPAMTSLEQRRQRAKAWA
KSRAGGTSHQIRTGAMPNLDKKIPRPRHRRGDKRSSGDNNHRSGDTNNQQ
DPPSRERGRAENNAHRRSANGGSSGNANINGGGGEFSSSGSEADIGGNPR
YEGGVTPARSRRSARSTAGMTPARPRSYRSSGGSGGTGGRAPPLPRGTAR
DRHATPARDRHSSRNGGGGGGAATRAFPGGRARRPPRRPATAPTPRGGRP
LGGVAGP
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