prot_S-firma_F_contig10111.208.1 (polypeptide) Sphaerotrichia firma ET2_F female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_F_contig10111.208.1
Unique Nameprot_S-firma_F_contig10111.208.1
Typepolypeptide
OrganismSphaerotrichia firma ET2_F female (Sphaerotrichia firma ET2_F female)
Sequence length197
Homology
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BLAST of mRNA_S-firma_F_contig10111.208.1 vs. uniprot
Match: UPI001C4B070C (protein tyrosine phosphatase domain-containing protein 1 isoform X1 n=2 Tax=Sceloporus undulatus TaxID=8520 RepID=UPI001C4B070C)

HSP 1 Score: 61.6 bits (148), Expect = 1.110e-7
Identity = 50/181 (27.62%), Postives = 92/181 (50.83%), Query Frame = 0 
Query:    1 VLFFNFAWAENTLPDMDTMFSVCKTVVGILEDGHKVALHAHGYGGRASLAAACCLVFRTGMKPAEAVVRMRRAAPKAL-SKPSIGFLRAFAAAAADAKAVFSALPSPMAAA-----LTRQRKALVVSSSTRDLYHVPRVVHAVCHALNAVDPDRAV---DGILGVDWSTSLETQLRRLKSA 172
            + F+NF W +  +  + T+  + K +   L++G +VA+H H   GR  +  AC LVF T M   +A++ +R   P ++ ++  +  +R F+      + VF++    + A      L RQR  L+    +R+L HVP+++H VC  L  +  +R +   + +   D S  +E  + +L SA
Sbjct:  196 IYFYNFGWKDYGVASLTTILDMVKVMTFALQEG-RVAIHCHAGLGRTGVLIACYLVFATRMTADQAILFVRAKRPNSIQTRGQLLCVREFSQFLIPLRNVFASCEPKVHAVTLSQYLIRQRH-LLHGYESRNLKHVPKLIHLVCKLLLDLAENRQMIEQELVDLPDLSAEIEETVSQLSSA 374
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10111.208.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
UPI001C4B070C1.110e-727.62protein tyrosine phosphatase domain-containing pro... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR029021Protein-tyrosine phosphatase-likeGENE3D3.90.190.10coord: 1..98
e-value: 4.6E-9
score: 38.2
IPR029021Protein-tyrosine phosphatase-likeSUPERFAMILY52799(Phosphotyrosine protein) phosphatases IIcoord: 3..79
NoneNo IPR availablePANTHERPTHR23339TYROSINE SPECIFIC PROTEIN PHOSPHATASE AND DUAL SPECIFICITY PROTEIN PHOSPHATASEcoord: 2..150
NoneNo IPR availablePANTHERPTHR23339:SF94PROTEIN TYROSINE PHOSPHATASE DOMAIN-CONTAINING PROTEIN 1coord: 2..150

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_F_contig10111contigS-firma_F_contig10111:100..690 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma female2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma ET2_F female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_F_contig10111.208.1mRNA_S-firma_F_contig10111.208.1Sphaerotrichia firma ET2_F femalemRNAS-firma_F_contig10111 100..690 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_F_contig10111.208.1 ID=prot_S-firma_F_contig10111.208.1|Name=mRNA_S-firma_F_contig10111.208.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=197bp
VLFFNFAWAENTLPDMDTMFSVCKTVVGILEDGHKVALHAHGYGGRASLA
AACCLVFRTGMKPAEAVVRMRRAAPKALSKPSIGFLRAFAAAAADAKAVF
SALPSPMAAALTRQRKALVVSSSTRDLYHVPRVVHAVCHALNAVDPDRAV
DGILGVDWSTSLETQLRRLKSAVNDGQWGALNAAATALQAQLLLDWL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029021Prot-tyrosine_phosphatase-like