prot_S-firma_F_contig10055.119.1 (polypeptide) Sphaerotrichia firma ET2_F female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_F_contig10055.119.1
Unique Nameprot_S-firma_F_contig10055.119.1
Typepolypeptide
OrganismSphaerotrichia firma ET2_F female (Sphaerotrichia firma ET2_F female)
Sequence length363
Homology
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BLAST of mRNA_S-firma_F_contig10055.119.1 vs. uniprot
Match: D7FVV8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FVV8_ECTSI)

HSP 1 Score: 251 bits (640), Expect = 4.920e-78
Identity = 174/268 (64.93%), Postives = 204/268 (76.12%), Query Frame = 0 
Query:  100 TPSYLRAFQAGVANNVRAMCELPDPREDREEEELEAEILQFGDDVQAARKRISATRARIARLSADTDRDALRASAAAEERACSVLEARTGHARKEKDVGGPLPLASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGAFSGIDPNVMEPKLSALIGKLTELPGPLKAVRQEIPELTASLAVSVQNAESVLEKMESRTEALLGKAPPTPLPSKKRRAAGAIGS---ADDPGGER--PEEVRSAAREARVEQARKEWEAGGLGVAGSFFN 362
            T +YLRAFQA VA+ VR +CE+ D RE REE+EL  EI QF  D++AAR R+ ATRAR+ARLSADT RDALR S AA++RAC+VLEA T HAR+E + GGPLPL          XXXXXXXXXXXXXXXXXXXXX G F G++  V+EPK+SALIGK+ ELPGPLK+V QEIPELTASLAVSVQ AE+ ++  +SRTEALLGKAPPTPL SKK + A        A+    ER  PE+ R+AAREARV+QARKEWEA G+GV G  FN
Sbjct:   39 TTAYLRAFQAAVADKVRDLCEVQDARESREEDELVGEIFQFSHDLRAARSRLYATRARVARLSADTCRDALRVSEAADDRACAVLEASTAHARRESETGGPLPLR----IDDAAXXXXXXXXXXXXXXXXXXXXXXGIFQGLETGVVEPKVSALIGKMAELPGPLKSVLQEIPELTASLAVSVQEAEAAIKAGQSRTEALLGKAPPTPLSSKKGKGAXXXXXXXXANVVEDERYPPEDARAAAREARVQQARKEWEAIGVGVVGGIFN 302
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10055.119.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FVV8_ECTSI4.920e-7864.93Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 282..302
NoneNo IPR availableCOILSCoilCoilcoord: 35..62
NoneNo IPR availableCOILSCoilCoilcoord: 130..164

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_F_contig10055contigS-firma_F_contig10055:3960..5048 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma female2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma ET2_F female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_F_contig10055.119.1mRNA_S-firma_F_contig10055.119.1Sphaerotrichia firma ET2_F femalemRNAS-firma_F_contig10055 3845..5341 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_F_contig10055.119.1 ID=prot_S-firma_F_contig10055.119.1|Name=mRNA_S-firma_F_contig10055.119.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=363bp
MSSSRKRKAADAAPAVAQASSNSAAGSTRNEQPLVRATNALLEELRRRIR
SMADEAVAKKLAGSASPTGSGTSAGSRNKSGGGTAAAAAEPPAADNNPTT
PSYLRAFQAGVANNVRAMCELPDPREDREEEELEAEILQFGDDVQAARKR
ISATRARIARLSADTDRDALRASAAAEERACSVLEARTGHARKEKDVGGP
LPLASAANGGGGDDDDGDGDGDGDGDGDGDGDGDAGAFSGIDPNVMEPKL
SALIGKLTELPGPLKAVRQEIPELTASLAVSVQNAESVLEKMESRTEALL
GKAPPTPLPSKKRRAAGAIGSADDPGGERPEEVRSAAREARVEQARKEWE
AGGLGVAGSFFN*
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