prot_S-firma_F_contig10039.102.1 (polypeptide) Sphaerotrichia firma ET2_F female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_F_contig10039.102.1
Unique Nameprot_S-firma_F_contig10039.102.1
Typepolypeptide
OrganismSphaerotrichia firma ET2_F female (Sphaerotrichia firma ET2_F female)
Sequence length374
Homology
BLAST of mRNA_S-firma_F_contig10039.102.1 vs. uniprot
Match: D8LB08_ECTSI (Miro-related GTP-ase 1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB08_ECTSI)

HSP 1 Score: 295 bits (754), Expect = 8.300e-89
Identity = 217/379 (57.26%), Postives = 248/379 (65.44%), Query Frame = 0
Query:    1 QVLALPAQKFLSQLFQQFSEE---SSGTSSPPTRLLTEAGQTEVFSVIPDPACAPWDAPRXXXXXXXXXXXXXXXXFGQDSGSGFHVPPFARLGRAPGAGRAMTVEAWMAHWQMLALHSPVLLRSHLFYVGFNGHAEDMLADKASP-SHRMVPSA-APPRRA----RQASAIEVFVLGSRGCGKSSLIEALRLGDDLRSPPARRASGGSFSVAEGPGAG---QDQDPEGLGVALGSEQKELQSQEALPGRRE--GPAAPXXXXXXXXXXXXXXEDGTWGEGEGGWEMVVDPEVPETCCGFARLQEEGAAGAXXXXXXXXXXXXXXXXXXXXXXXXXXXTEVPESYADSFADDQVWRCDLALLVFDPSSRESLDFVTPLL 365
            QVL+  A KFL +LF+QFSEE     G  + P RLL E GQ +VFSVIPDP CAPWD PR     XXXXXXXXXXX      + F +PPFARLGRAPGAGRA+T E W+AHWQMLALHSPVLLRSHLFYVGF GHAE+ML DK+S  ++R   +    PRR+    RQ S +EVFVLGSRGCGKS LI+ LRLGDDLRS   + +SGG+   A    +G    +Q P   GV L +E+ E    EA P      GP   XXXXXXXXXX    ED         WEMV + EVPETCCGFA L +  AAG+         XXXXXXX           TEVPESY D+F +DQ WRCDLALLVFDPSSRES+DF+ PLL
Sbjct:  321 QVLSPQAHKFLLELFKQFSEEREGGDGLDASPPRLLAEEGQAKVFSVIPDPTCAPWDPPRSLGEEXXXXXXXXXXXXXXXXXAVFSMPPFARLGRAPGAGRALTAEGWIAHWQMLALHSPVLLRSHLFYVGFGGHAEEMLVDKSSQLTYRAAATTETSPRRSGARGRQPSVMEVFVLGSRGCGKSRLIKGLRLGDDLRSNQ-QPSSGGNVPRASATASGGQASEQGPSESGVGLDTEEGE----EASPEDEAFLGPGGXXXXXXXXXXXSGGEED---------WEMVAEAEVPETCCGFAVLAD--AAGSPSAAGFSGSXXXXXXXYGSSLSVAV--TEVPESYTDTFVEDQAWRCDLALLVFDPSSRESIDFIMPLL 681          
BLAST of mRNA_S-firma_F_contig10039.102.1 vs. uniprot
Match: A0A6H5JAM1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAM1_9PHAE)

HSP 1 Score: 243 bits (620), Expect = 1.090e-70
Identity = 180/303 (59.41%), Postives = 203/303 (67.00%), Query Frame = 0
Query:    1 QVLALPAQKFLSQLFQQFSEESSG---TSSPPTRLLTEAGQTEVFSVIPDPACAPWDAPRXXXXXXXXXXXXXXXXFGQDSGSGFHVPPFARLGRAPGAGRAMTVEAWMAHWQMLALHSPVLLRSHLFYVGFNGHAEDMLADKASP-SHRMVPSA-APPRRA----RQASAIEVFVLGSRGCGKSSLIEALRLGDDLRSPPARRASGGSFSVAEGPGAG---QDQDPEGLGVALGSEQKELQSQEALPGRREGPAAPXXXXXXXXXXXXXXEDGTWGEGEGGWEMVVDPEVPETCCGFARLQE 291
            QVL+  A KFL +LF+QFSEE  G     + PTRLLTE GQ EVFSVIPDP CAPWD PR     XXXXXXXXXXX     G  F +PPFARLGRAPGAGRA+T E W+AHWQMLALHSPVLLRSHLFYVGF GHAE+ML DK+S  ++R   +    PRR+    RQ S +EVFVLGSRGCGKS LI+ LRLGDDLRS   + +SGG+   A    +G    +Q P    V L +E+ E    EA P   E  A      XXXXXXXXXX  G    GEG WEMV + EVPETCCGFA L E
Sbjct:  321 QVLSPKAHKFLLELFKQFSEEREGGGVLDASPTRLLTEEGQAEVFSVIPDPTCAPWDPPRSRGEEXXXXXXXXXXXXXXXXGV-FSMPPFARLGRAPGAGRALTAEGWIAHWQMLALHSPVLLRSHLFYVGFKGHAEEMLVDKSSQLAYRAAATTETSPRRSGARGRQPSVMEVFVLGSRGCGKSRLIKGLRLGDDLRSKQ-QPSSGGNVPRASATASGGQASEQGPSESAVGLDTEEGE----EASP---EDEAFLGPGGXXXXXXXXXXVSG----GEGDWEMVAEAEVPETCCGFAVLAE 610          
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10039.102.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LB08_ECTSI8.300e-8957.26Miro-related GTP-ase 1 n=1 Tax=Ectocarpus siliculo... [more]
A0A6H5JAM1_9PHAE1.090e-7059.41Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.238.10coord: 2..205
e-value: 1.4E-18
score: 69.1

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_F_contig10039contigS-firma_F_contig10039:1039..5135 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma female2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma ET2_F female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_F_contig10039.102.1mRNA_S-firma_F_contig10039.102.1Sphaerotrichia firma ET2_F femalemRNAS-firma_F_contig10039 1039..5135 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_F_contig10039.102.1 ID=prot_S-firma_F_contig10039.102.1|Name=mRNA_S-firma_F_contig10039.102.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=374bp
QVLALPAQKFLSQLFQQFSEESSGTSSPPTRLLTEAGQTEVFSVIPDPAC
APWDAPRPREAEGQGTSSSSSSSFGQDSGSGFHVPPFARLGRAPGAGRAM
TVEAWMAHWQMLALHSPVLLRSHLFYVGFNGHAEDMLADKASPSHRMVPS
AAPPRRARQASAIEVFVLGSRGCGKSSLIEALRLGDDLRSPPARRASGGS
FSVAEGPGAGQDQDPEGLGVALGSEQKELQSQEALPGRREGPAAPAAAAR
SGSGGAGGGEDGTWGEGEGGWEMVVDPEVPETCCGFARLQEEGAAGAGGE
SGSGAGGSSGSSSSCGCASVSVTVTEVPESYADSFADDQVWRCDLALLVF
DPSSRESLDFVTPLLVGGTRTHT*
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