mRNA_S-firma_F_contig1110.1458.1 (mRNA) Sphaerotrichia firma ET2_F female
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Overview
Homology
BLAST of mRNA_S-firma_F_contig1110.1458.1 vs. uniprot
Match: A0A6H5JSC7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSC7_9PHAE) HSP 1 Score: 244 bits (624), Expect = 1.150e-68 Identity = 152/383 (39.69%), Postives = 226/383 (59.01%), Query Frame = 2
Query: 50 TEVELARQLLSHVHRGNRRGAESALAAGASVDGSWELDYRPILDASAYGNGNMVKFLITTGCNVNLGAPRDVKTASGEQMMLAGQRALHTAIDSYHLEVFRMLLKHGADPNAPTDCGVTPLMCACKVREGESQAKKHLVMARELLEAGADPVVAERVASRTALHSAAGLGSPELVELVLSKSPPTSWNHADKAGRTALVYAALEGRLAEAKLLVSAGVMQPSSSPAGVQCPLAAAAQGGHAGIVQLLLEDR-MRVVGGTRKLPQAIFSAIAF--SRVSVLQTLISAGGEEQLAHWAGLSWDNRPMLNWASTVAHLPTISVLLTAGAREDARDFRGRLAFDVIGSDKSVVADMDACRRAAVRRMLQRGPAFRAKSWAWPGSDEA 1189
T+ +LA QLL+++ + N G E LAAGASVDGS ELD+RPI+ A+A G+ M LI NV+LG+ D++ + G +++ G RALH AI+ YH++VFR+LLK GADP++ G+TPLM C + E ++ ++ VMARE +TAL AA +L++++L K+P T+ N A G T L AA+ G+ L+SAG QP +S CPL AA + H +V++LL DR M + G +P+A+ +A + R S+++ L+SA G E+ HWA + P+L+ A + ++ VLL AGA E A + GR A +V+G + + D ++ A+ RML RGPA+RA+SWAWP + A
Sbjct: 114 TKPQLAAQLLAYIRQRNEAGVERTLAAGASVDGSSELDWRPIIAAAASGSVGMADLLIKRQANVDLGSLNDLRCSDGLEVLGKGVRALHVAINHYHVDVFRLLLKAGADPDSANGKGLTPLMLTC-ILEDSARGEQRAVMAREXXXXXXXXXXXXXX-XKTALGFAAARDQTDLIDILLQKAP-TTLNRATPDGLTPLYAAAMSGKGKAVSHLLSAGARQPPASAEKDMCPLVAAVRENHQEVVRVLLTDRGMEAIDGPDVIPRAVGAAASARKGRASIVRMLLSAEGHEREGHWARCRYKEDPVLHCAVSFGNISATRVLLAAGADETAENEDGRPAREVVGFNAPSL-QRDPAKKGAIVRMLARGPAYRARSWAWPATARA 492
BLAST of mRNA_S-firma_F_contig1110.1458.1 vs. uniprot
Match: D8LSK8_ECTSI (Ankyrin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSK8_ECTSI) HSP 1 Score: 241 bits (614), Expect = 2.690e-67 Identity = 150/383 (39.16%), Postives = 227/383 (59.27%), Query Frame = 2
Query: 50 TEVELARQLLSHVHRGNRRGAESALAAGASVDGSWELDYRPILDASAYGNGNMVKFLITTGCNVNLGAPRDVKTASGEQMMLAGQRALHTAIDSYHLEVFRMLLKHGADPNAPTDCGVTPLMCACKVREGESQAKKHLVMARELLEAGADPVVAERVASRTALHSAAGLGSPELVELVLSKSPPTSWNHADKAGRTALVYAALEGRLAEAKLLVSAGVMQPSSSPAGVQCPLAAAAQGGHAGIVQLLLEDR-MRVVGGTRKLPQAIFSAIAF--SRVSVLQTLISAGGEEQLAHWAGLSWDNRPMLNWASTVAHLPTISVLLTAGAREDARDFRGRLAFDVIGSDKSVVADMDACRRAAVRRMLQRGPAFRAKSWAWPGSDEA 1189
T+ +LA QLL+++ + N G E LAAGASVDGS ELD+RPI+ A+A M + LI +V+LG+ D++ + G +++ G RALH AI+ Y+++VFR+LLK GADP++ G+TPLM C + E ++ ++ VMARE +TAL AA L++++L K+P T+ N A G T L AA+ G+ L+SAG QP +S CPL AA + H +V++LL DR M+ +GG +P+A+ +A + R S+++ L+SA G E+ HWA + P+L+ A + ++ VLL AGA E A + GR A +V+G + + D ++ A+ RML+RGPA+RA+SWAWP + A
Sbjct: 106 TKPQLAAQLLAYIRQRNEAGVERTLAAGASVDGSSELDWRPIIAAAASCKVGMAELLIKRKADVDLGSLNDLRCSDGLEVLGKGVRALHVAINHYNVDVFRLLLKAGADPDSANGKGLTPLMLTC-ILEDSARGEQRAVMAREXXXXXXXXXXXXXX-XKTALGFAAARDQTNLIDILLQKAP-TTLNRATPDGLTPLYAAAMSGKGKAVSHLLSAGARQPPASAEKDMCPLVAAVRENHQEVVRVLLTDRGMKAIGGADVIPRAVGAAASARKGRASIVRMLLSAEGHEREGHWARCRYKEDPVLHSAVSFGNISATRVLLAAGADETAENEDGRPAREVVGFNAPSL-QRDPAKKGAIVRMLERGPAYRARSWAWPATARA 484
BLAST of mRNA_S-firma_F_contig1110.1458.1 vs. uniprot
Match: D8LSK4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LSK4_ECTSI) HSP 1 Score: 200 bits (509), Expect = 2.720e-54 Identity = 145/396 (36.62%), Postives = 207/396 (52.27%), Query Frame = 2
Query: 74 LLSHVHRGNRRGAESALAAGASVDGSWEL--DYRPILDASAYGNGNMVKFLITTGCNVNLGAPRDVKTASGEQMMLAGQRALHTAIDSYH---LEVFRMLLKHGADPNAPTDCGVTPLMCACKVREGESQAKKHLVMARELLEAGADPVVAERVASRTALHSAAGLGSPELVELVLSKSPPTSWNHADKAGRTALVYAALEGRLAEAKLLVSAGVMQPSSSPAGVQCPLAAAAQGGHAGIVQLLLEDRMR--VVGGTRKLPQAIFSAIAFSRVSVLQTLISAGGEEQLAHWAGLSWD-NRPMLNWASTVAHLPTISVLLTAGAREDARDFRGRLAFDVIGSDKSVVADMDACRRAAVRRMLQRGPAFRAKSWAWPGSDEAASVSDAGVDAVAVWRG 1237
LL V GN+RG E LAAGAS+DGS ++ P++ A+A G+ +M+KFL+ G ++N R SG RA+H A+ S + L+ R L+K GAD N G TPLM AC+V + + + + +ARELL+AG D + + R ALH AA G+ L++ +LSK ++ N A + G+T L A LL+SAG Q CP +AA G+ I+++L +R V GG LP ++ A + +L+ L++A G+E+ HWA RP++ A+ L + VLL AGA E D G A +VIG +D AA+ R LQRGPA+RA+SWAWP ++A DAG A RG
Sbjct: 9 LLVEVQNGNKRGVERYLAAGASIDGSPHSGEEFPPVVFAAAVGSASMIKFLVDKGADINSSTWRPGAFPSGS-------RAIHVAVSSGYAGALDALRELIKAGADLNGRNYQGCTPLMMACRV---DKEGAERVELARELLKAGVDTTLVD-ADGRAALHYAAYSGNEALIQALLSKGSLSTLNLATQDGKTPLCVAVEFVHCGVVSLLLSAGASQRGLQEGNYPCPFRSAAALGYESILRILCSERGMDAVGGGAAVLPNSLACATRRGKARILRLLLAAEGQERQEHWARRRLVLGRPLVYLAAAYGILANVKVLLAAGADETETDPDGYAAPEVIGGQLPS-GTLDPLEAAAIGRELQRGPAYRARSWAWPVGEDAPVAGDAG--AAGALRG 390
BLAST of mRNA_S-firma_F_contig1110.1458.1 vs. uniprot
Match: A0A6H5JK53_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK53_9PHAE) HSP 1 Score: 192 bits (489), Expect = 1.440e-51 Identity = 150/423 (35.46%), Postives = 217/423 (51.30%), Query Frame = 2
Query: 68 RQLLSHVHRGNRRGAESALAAGASVDGSWELDYRPILDASAYGNGNMVKFLITTGCNVNLGAPRDVKTASGEQMMLAGQRALHTAIDSYHLEVFRMLLKHGADPNAPTDCGVTPLMCACKVREGESQAKKHLVMARELLEAGADPVVAERVASRTALHSAAGLGSPELVELVLSKSPPTSWNHADKAGRTALVYAALEGRLAEAKLLVSAGVMQPSSSPAGVQCPLAA---AAQGGHAGIVQLLLEDRMRVVGGTRKLPQAIFSAIAFSRVSVLQTLISAGGEEQLAHWAGLSWDNRPMLNWASTVAHLPTISVLLTAGAREDARDFRGRLAFDVIGSDKSVVADMDACRRAAVRRMLQRGPAFRAKSWAWPGSDEAASVSDAGVDAVAVWRGERQDPLRIRISRTRNRQYFVRLIFGRYPRK 1327
R+LL V +GN G + LA GA+VDGS EL+Y PI+ A+ GN M+K LI+ G D++T E AG RA+H AI + +LL+ GAD N+ G TPLM G ++AREL + GA P V + +A+H AAGLG+ E++ ++L+ +P ++ N D G T + AAL G+ L+SAG +S GV AA A GGH +V+++LE + VGG +P +I A+ + +L+ L+SA GEE WA + L+ A+ + I VLL+AGARE + G+LA + +G A + AAV RMLQRGPA+RA+S+ WP D SD + + R + ++I R ++F F RY K
Sbjct: 9 RRLLMEVEKGNLSGVKKLLAGGANVDGSRELEYPPIMGAARNGNAAMLKLLISKGA--------DLET---EARFPAGSRAIHAAISGENPTALSVLLEAGADFNSRDGAGETPLMLTALADTGA-------LLARELFKVGASPFV-KNADGMSAMHVAAGLGNLEVMTVILTNTP-SALNVLDNKGFTPMGIAALRGQRRAVFHLLSAG-----ASDLGVDEQNAAILWACDGGHPRMVRMMLEHGINRVGGLGAIPNSIGVAVQGRQAKILEMLVSAEGEENRRKWAECRLRDGTPLHLAAAWVSVRAIHVLLSAGARETLPNGYGKLASEEVGIALRPPARRSPRKEAAVVRMLQRGPAYRARSYGWPTLDGGNGTSDVTLSS----RTRGANSFGVQIFRPTGTRFFA-TRFARYANK 401
BLAST of mRNA_S-firma_F_contig1110.1458.1 vs. uniprot
Match: D8LDZ2_ECTSI (Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDZ2_ECTSI) HSP 1 Score: 163 bits (413), Expect = 1.070e-40 Identity = 145/429 (33.80%), Postives = 208/429 (48.48%), Query Frame = 2
Query: 71 QLLSHVHRGNRRGAESALAAGASVDGSWELDYRPILDASAYGNGNMVKFLITTGCNVNLGAPRDVKTASGEQMML---AGQRALHTAIDSYHLEVFRMLLKHGADPNAPTDCGVTPLMCACKVREGESQAKKHLVMARELLEAGADPVVAERVASRTALHSAAGLGSPELVELVLSKSPPTSWNHADKAGRTALVYAALEGRLAEAKLLVSAGVMQPSSSPAGVQCPLAAAAQGGHAGIVQLLLEDRMRVVGGTRKLPQAIFSAIAFSRVSVLQTLISAGGEEQLAHWAGLSW-DNRPMLNWASTVAHLPTISVLLTAGAREDARDFRGRLAFDVIGSDKSVVADMDACRR-----AAVRRMLQRGPAFRAKSWAWPGSDEAASVSDAGVDAVAVWRGERQDPLRIRISRTRNRQYFVRLIFGRYPRKK 1330
+LL HV +G+ +GA L AGA+ DG+ E P+ A+ G +++K LI G +++ + D K A G L G LH A+ +L+ R+LL GADPN G TPLM C +AK +++ A TALH AA +P+L+ L+LS++P T N +K G TAL YAA EG L+SAG S A L A + GH +V++LL+ ++ VGG + A+ +I +LQ L+ GE++ WA L D P L+ A+ L S+LL AGA E + + G+ V A + A ++ AAV R+L+RGPAFRA+SWAW S + A V +G R L +RI R Q+F F RY +K+
Sbjct: 9 RLLHHVEKGSLQGAIEMLKAGANADGTSEAATSPLFLAANRGRIDILKLLIDNGADLDGTSSLD-KFADGFTGNLPFEGGTTPLHGALAGENLDALRLLLLAGADPNLADGKGCTPLMMTCLKY---FRAKNYVLTAXXXXXXXXXXXXXXXXXXXTALHVAATFNAPDLLGLLLSRAPSTV-NLPNKKGVTALCYAASEGMEVAVSCLLSAGARDNPSLFANGIGSLLIAVELGHEQVVRVLLDRGVQAVGGELAMSYALRRSILKRFPRILQMLLDVEGEQKRVKWARLRHTDGTPALHLAAACESLVAASILLQAGADEGTANGLDK------GASCCVGAALPANKKNPDTSAAVCRLLERGPAFRARSWAWAAES---SEAPAASGTVCSMKGGRAT-LDVRIFRPTGNQFFS-ARFSRYCKKR 421
BLAST of mRNA_S-firma_F_contig1110.1458.1 vs. uniprot
Match: A0A6H5L2Q3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2Q3_9PHAE) HSP 1 Score: 154 bits (390), Expect = 1.370e-37 Identity = 138/429 (32.17%), Postives = 204/429 (47.55%), Query Frame = 2
Query: 56 VELARQLLSHVHRGNRRGAESALAAGASVDGSWELDYRPILDASAYGNGNMVKFLITTGCNVNLGAPRDVKTASGEQMMLAGQRALHTAIDSYHLEVFRMLLKHGADPNAPTDCGVTPLMCACKVREGESQAKKHLVMARELLEAGADPVVAERVASRTALHSAAGLGSPELVELVL----SKSPPTSWNHADKAGRTALVYAALEGRLAEAKLLVSAGVMQPSSSPAGVQCPLAAAAQGGHAGIVQLLLEDRMRVVGGT-RKLPQAIFSAIAFSRVSVLQTLISAG-GEEQLAHWAGLSWDNRPMLNWASTVAHLPTISVLLTAGAREDARDFRGRLAFDVIGS-----DKSVVADMDACRRAAVRRMLQRGPAFRAKSWAWPGSDEAASVSDAGVDAVAVWRGERQD-PLRIRISRTRNRQYFVRLI 1306
L +LL +G+ ++A+AAGA GS RP++ AS G+ +V FL+ G A + +T + G RA H A+ S L+ +LLK GA +A G T LM AC ++ + MA+ LL+AGADP++ +R + ALH AA G+P +++L+L S +H + T L A ++ L+S G + + G L A IV++L E + VGG R +P ++ SA R +L+ L++ G G+ +WA P+LN A+ A + + VLL AGA E D + A D+IG KS D +AA+RR L RGPA+RA+SW WP ++ DAVA G + PL + I R R + VRLI
Sbjct: 4 TSLENRLLRGAQKGDLPAVQAAIAAGADPSGSSNSRLRPLMVASGSGSVEVVNFLLQNG------AEMEHQTWGDDDHRFLGMRATHWAVTSGKLDTLLVLLKAGAVYDAVNAQGETCLMNACMT---DASPPTCVAMAKALLDAGADPLIEDRE-GQVALHHAAAQGNPNMIDLLLQAKGSSLSKKLLSHVSRWEHTPLQSALESNQVQAVAHLLSLGA-RATVDREGRGNLLRRAVVKNSEPIVRVLFEAGLESVGGAARVMPDSLASAAKAGRTRLLKLLLTVGRGDRTTGYWANYYVWGGPLLNVAAGYATVDCVGVLLAAGADERVPDDERQTAGDMIGDLLASGSKSASFRSD---KAAIRRTLLRGPAYRARSWTWP------PLAAGADDAVAFPSGHPEKVPLGVHIFRRRGEKLVVRLI 412
BLAST of mRNA_S-firma_F_contig1110.1458.1 vs. uniprot
Match: D7G4M4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4M4_ECTSI) HSP 1 Score: 152 bits (383), Expect = 2.680e-36 Identity = 129/383 (33.68%), Postives = 188/383 (49.09%), Query Frame = 2
Query: 194 GNGN--MVKFLITTGCNVNLGAPRDVKTASGEQMMLAGQRALHTAIDSYHLEVFRMLLKHGADPNAPTDCGVTPLMCACKVREGESQAKKHLVMARELLEAGADPVVAERVASRTALHSAAGLGSPELVELVLSKSPPTSWNHADKAGRTALVYAALEGRLAEAKLLVSAGVMQPSSSPAGVQCPLAA---AAQGGHAGIVQLLLEDRMRVVGGTRKLPQAIFSAIAFSRVSVLQTLISAGGEEQLAHWAGLSWDNRPMLNWASTVAHLPTISVLLTAGAREDARDFRGRLAFDVIGSDKSVVADMDACRRAAVRRMLQRGPAFRAKSWAWPGSDEAASVSDAGVDAVAVWRGERQDPLRIRISRTRNRQYFVRLIFGRYPRK 1327
GNGN M+K LI+ G N+ E AG RA+H AI + +LL+ GAD N+ G TPLM G ++AREL + GA P V + +A+H AAGLG+ E++ ++L+ +P N D G T + AAL G+ L+SAG +S GV AA A GGH +V+++LE + VGG +P +I A+ + +L+ L+SA GE+ WA + L+ A+ + + VLL+AGARE + G+LA + +G A + AAV RMLQRGPA+RA+S+ WP D SD + + RG + ++I R ++F F RY K
Sbjct: 104 GNGNTAMLKLLISKGANLET-----------EARFPAGSRAIHAAISGENPTALCVLLEAGADFNSRDGAGETPLMLTALADTGA-------LLARELFKVGASPFV-KNADGMSAMHVAAGLGNLEVMTVILTNTPSVL-NVLDNKGFTPMGIAALRGQRRAVFHLLSAG-----ASDLGVDEQNAAIFWACDGGHPRMVRMMLEHGINRVGGLGAIPNSIGVAVQGRQAKILEMLVSAEGEDNRRKWAECRLRDGTPLHLAAAWVSVRVMHVLLSAGARETLPNRYGKLAGEEVGIALGPPARRSPRKEAAVVRMLQRGPAYRARSYGWPTLDGGNGTSDVALSSRT--RGAKS--FGVQIYRPTGTRFFA-TRFARYANK 456
BLAST of mRNA_S-firma_F_contig1110.1458.1 vs. uniprot
Match: D8LME6_ECTSI (Inversin protein alternative isoform n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LME6_ECTSI) HSP 1 Score: 148 bits (373), Expect = 3.330e-35 Identity = 142/439 (32.35%), Postives = 210/439 (47.84%), Query Frame = 2
Query: 68 RQLLSHVHRGNRRGAESALAAGASVDGSWELDYRPILDASAYGNGNMVKFLITTGCNVNLGAPRDVKTASGEQMMLAGQRALHTAIDSYHLEV--FRMLLKHGADPNAPTDCGVTPLMCACKVREGESQAKKHLVMARELLEAGADPVVAERVASRTALHSAAGLGSPELVELVLSKSPPTSWNHADKAGRTALVYAALEGRLAEAKLLVSAGVMQPS--SSPAGVQCPLAAAAQGGHAGIVQLLLE--DRMRVVGGTRKLPQAIFSAIAFSRVSVLQTLISAGGE-----EQLAHWAGLSWDNR---PMLNWASTVAHLPTISVLLTAGAREDARDFRGRLAFDVIGSDKSVV--ADMDACRRAAVRRMLQRGPAFRAKSWAWPGSDEAASV---SDAGVDAVAVWRGERQDPLRIRISRTRNRQYFVRLIFGRYPRK 1327
++LL V GN +G + ALAAGA+V+GS L RP++ A+ +GN + K LI G N+ L + + G ALH A+ S+ +EV R+LL GA+P+A G T L AC V + + + L M RELL GA ++ + H AA G L+EL+LS++P NH + T + +AA G+ LVSAG + S G L A G +V++LL + ++ GG ++ A+ A+ + L+ LIS GG+ QL G DN+ P L A + + +LL AGA D R D++G+ ++ D D + A + R+L+R PAFRA+SW WPG+ V SD G DA PL +I R +F + F +Y +K
Sbjct: 5 KRLLQEVQNGNLKGVDEALAAGANVNGSSRLSCRPLICAARWGNCKIAKRLIEKGANLELAVTDETGFGGISPLYPVGSNALHAAV-SFGVEVGMIRVLLDGGANPDAQDIDGCTALANACSVLDPDER----LAMVRELLRGGAT-AFSKTFKGTSPAHFAASKGDCRLLELLLSEAPAMI-NHVNDDFGTPMAFAASTGQDKAVSFLVSAGASDEAVLSHERG---SLFMALCRGFTNVVRVLLSSPEALKAAGGYDEIRHAMCWAMQQGQPESLRLLISVGGKTRYWSNQLVLVPGRLSDNQVEVPALQCAVCYQCVESTKLLLEAGA--DERFLTNHKPADLLGAVGLLLDAEDRDLQKAAEIVRVLRRAPAFRARSWRWPGATATPPVDAGSDPGDDAAT--------PLGAQIFWPAGRNFFTKR-FEKYAKK 422
BLAST of mRNA_S-firma_F_contig1110.1458.1 vs. uniprot
Match: D7FLL0_ECTSI (Ankyrin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLL0_ECTSI) HSP 1 Score: 141 bits (355), Expect = 6.640e-33 Identity = 125/416 (30.05%), Postives = 192/416 (46.15%), Query Frame = 2
Query: 182 ASAYGNGNMVKFLITTGCNVNLGAPRDV-----KTASGEQMMLAGQRALHTAID-SYHLEVFRMLLKHGADPNAPTDCGVTPLMCACKVREGESQAKKHLVMARE-LLEAGADPVVAERVASRTALHSAAGLGSPELVELVLSKSPPT----SWNHADKAGRTALVYAALEGRLAEAKLLVSAGVMQPSSSPAGVQCPLAAAAQGGHAGIVQLLLEDRMRVVGGTRKLPQAIFSAIAFSRVSVLQTLISAGGEEQLAHWAGLSWDNRPMLNWASTVAHLP-TISVLLTAGAREDARDFRGRLAFDVIGS------------DKSVVADMDACRRAAVRRMLQRGPAFRAKSWAWPGSDEAASVSDAGVDAVAVWRG---------ERQDPLRIRISRTRNRQYFVRLIFGRYPRKK 1330
A+ + + + LI G +VN G + + + + G+ A H AI + +++ +LL+ GADP+A G+TPLMC + E L A E L++AG +P + LH A +G+PE + +L+ SP +W+ G +AL A EG L+ L+S G P ++ CPLA A GH IV++LL + V G A+ AI SR +L+ +++ GEE A WA W L S LP ++S LL AGA E+A D G+ DVIG+ ++ D + A +RR ++R PAFRA+SWAWP + A + A + + G + + PL ++I R R + I RY +K+
Sbjct: 2 AAVHAQTEIAQLLIERGAHVNAGVTNPSMGTRERVVNSTFLPMQGENAFHAAICFAKKMDLVDLLLRAGADPSAGNKLGITPLMCLAR----EEPPGPWLECALEVLIKAGVNPDQVDAEGWTAFLH-AVEVGNPEKIRRILALSPAALGRIAWD-----GMSALYVACNEGHLSVVSCLLSLGAKHPRTTIRD-HCPLAVAIIKGHEDIVKILLANLSAVGGVELAAEMALTCAITQSRGKILRMMLNITGEENAARWADSDWGLAGSLLHYSCGYILPASVSALLAAGANENATDQAGQRPIDVIGTMDLQNPPLSPLHPRTPTRFRDPVKEAEIRRTVERAPAFRARSWAWPAFEWAGCSTTAAICGSSTCNGLTKASGQGRKTRTPLVVQIHRP-ERNKLLSGILTRYQQKR 405
BLAST of mRNA_S-firma_F_contig1110.1458.1 vs. uniprot
Match: D8LMA6_ECTSI (Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMA6_ECTSI) HSP 1 Score: 121 bits (304), Expect = 7.870e-26 Identity = 116/414 (28.02%), Postives = 178/414 (43.00%), Query Frame = 2
Query: 53 EVELARQLLSHVHRGNRRGAESALAAGASVDGSWELDYRPILDASAYGNGNMVKFLITTGCNVNLGAPRDVKT------ASGEQMMLAGQRALHTAIDSYHLEVFRMLLKHGADPNAPTDCGVTPLMCACK-VREGESQAKKHLVMARELLEAGADPVVAERVASRTALHSAAGLGSPELVELVLSKSPPTSWNHADKAGRTALVYAALEGRLAEAKLLVSAGVMQPSSSPAGVQCPLAAAAQGGHAGIVQLLLEDRMRVVGGTRKLPQAIFSAIAFSRVSVLQTLISAGGEEQLAHWA-------------GLSWDNR--------------PMLNWASTVAHLPTISVLLTAGAREDARDFRGRLAFDVIGSDKSVVADMDACRRAAVRRMLQRGPAFRAKSWAWPGSDEAA 1192
E + QL++ + G + LAAGAS+ S E + P+ A+A+G+ +++K L+ +G + VK+ + L G ALH A + +LL+ GA+PN+ GVTP+M AC+ VR M LL+AGAD V E A+H AA ++VEL+LSK+P T NHA G T L ++ VGG + A+ +++ + + +L L++ G+E+ WA GL+ P+L+ A+ +P I VLL+AGA D++G++A D IG + + AAVR +L +GPAFRA+SWAWP + AA
Sbjct: 4 EARKSGQLMNALVHGRLKDVTRMLAAGASLRASREENIHPMAVAAAHGHVHIIKALVRSGAEIEATCTSRVKSDGYCCETNPNWPYLNGFTALHIAAILGKVRAMLVLLQLGANPNSSDTRGVTPVMMACQGVRCCRPSTPNQAEMLNSLLKAGAD-VELEDGTGLLAIHFAASHCETQVVELLLSKAPSTL-NHATHKGFTPLAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKNGFEAVGGKPAIADAMRTSVQYGHIDMLTILLNVEGDEKQEVWANQFVYCSHETVDVGLAPARDFPSTHAIMAIAFGCPLLHTAAKYCAIPAIRVLLSAGALAGKADYQGKVAEDAIGVYHH---ERNGSVEAAVRALLLKGPAFRARSWAWPATMNAA 412 The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig1110.1458.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90) Total hits: 18
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The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-firma_F_contig1110.1458.1 >prot_S-firma_F_contig1110.1458.1 ID=prot_S-firma_F_contig1110.1458.1|Name=mRNA_S-firma_F_contig1110.1458.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=433bp MPSPPTEVELARQLLSHVHRGNRRGAESALAAGASVDGSWELDYRPILDAback to top mRNA from alignment at S-firma_F_contig1110:1242..4223- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-firma_F_contig1110.1458.1 ID=mRNA_S-firma_F_contig1110.1458.1|Name=mRNA_S-firma_F_contig1110.1458.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=2982bp|location=Sequence derived from alignment at S-firma_F_contig1110:1242..4223- (Sphaerotrichia firma ET2_F female)back to top Coding sequence (CDS) from alignment at S-firma_F_contig1110:1242..4223- >mRNA_S-firma_F_contig1110.1458.1 ID=mRNA_S-firma_F_contig1110.1458.1|Name=mRNA_S-firma_F_contig1110.1458.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=2598bp|location=Sequence derived from alignment at S-firma_F_contig1110:1242..4223- (Sphaerotrichia firma ET2_F female)back to top |