mRNA_S-firma_F_contig11087.1442.1 (mRNA) Sphaerotrichia firma ET2_F female
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Overview
Homology
BLAST of mRNA_S-firma_F_contig11087.1442.1 vs. uniprot
Match: D7G854_ECTSI (Cysteine--tRNA ligase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G854_ECTSI) HSP 1 Score: 847 bits (2187), Expect = 4.310e-303 Identity = 429/553 (77.58%), Postives = 467/553 (84.45%), Query Frame = 1
Query: 184 SARAATTAAATGREAGHPTVWNAVNRCLDPFPDPSTGVLKWYSCGPTVYDSAHLGHARTYVSLDVIRRILTDYFRFDITFALGITDVDDKIIARARERGLRDWPEIAEMAAEFERQFMEDMSELGVRPPDAVTRVTDHVPEIIGYIQRIVDNGMAYEADGGVYFDVEGMGTDYGKLGVQASSSTTPEEEGGSELRGKKSHKDFALWKKAKPDEPSWESPFGRGRPGWHIECSAMTHSLFGPNLDVHSGGIDLKFPHHTNEIAQCEAHGSCGGILATAMAAGDQGPAEMGGGSGGVMRKPWVRHWIHTGHLNIEGLKMSKSLKNFVTVREYLDGHSAGREAAAEDFRMFCLMHKYSSNVTFSGDRMEEASVVRARFQRFLALADATIRAARKDRPAAAALRWGQKEKWLAEETSNCRREVRLALSDDFDTPRAVRHLVSLCSLISPHLKELTEGDLGPVVSATNFTAETLSLLGVGSSAGXXXXXXXXXXXXXXXLRQDSADVGGDGGGLAGGDGLPPAREFAAAMVEFRRLVRKHVLARSLTKIGPA-RLMKR 1839
S+ A+ T R P VWN VN CL+P PDPSTG+LKWYSCGPTVYDSAHLGHARTYVSLDVIRR+LTDYFRFD+T+ALGITDVDDKIIARARE GLR+WPE+AEMAAEFERQF+EDMS+LGVRPPDA+TRVTDH+P+I+ YIQRI++NGM YEA GGVYFDVEGMG YGKLGV+ASSSTTPEEEGGSELRGK+SHKDFALWK AK DEPSWESPFGRGRPGWHIECSAMTHSLFGPNLDVHSGG+DLKFPHHTNEIAQCEAH +CGG+ ATA A GD GG GG RKPWVRHWIHTGHLNIEGLKMSKSLKNFVT+REYL+GHSAG+EAAAEDFRMFCLMHKYSSNVTFS DRMEEASVVR R QRFLALAD TI AARK+RPA A+RWG+KEKWL EETS CRREVRLALSDDFDTPRAVRHL SLC+LISPHLKELT+GDLGPVVSA NF AETL+LLGVG S+ + GG+ GGL G DGLPPARE AMVEFRR+ RKHVL R+L K + +LMKR
Sbjct: 28 SSSASATTPTAARAPVQPAVWNTVNGCLEPLPDPSTGMLKWYSCGPTVYDSAHLGHARTYVSLDVIRRVLTDYFRFDVTYALGITDVDDKIIARARENGLREWPEVAEMAAEFERQFLEDMSDLGVRPPDALTRVTDHIPDIVAYIQRILENGMGYEAAGGVYFDVEGMGGAYGKLGVKASSSTTPEEEGGSELRGKRSHKDFALWKTAKADEPSWESPFGRGRPGWHIECSAMTHSLFGPNLDVHSGGVDLKFPHHTNEIAQCEAH-ACGGVAATAAATGD-------GGVGGE-RKPWVRHWIHTGHLNIEGLKMSKSLKNFVTIREYLEGHSAGQEAAAEDFRMFCLMHKYSSNVTFSEDRMEEASVVRGRLQRFLALADVTIGAARKNRPADTAVRWGKKEKWLVEETSTCRREVRLALSDDFDTPRAVRHLASLCALISPHLKELTQGDLGPVVSARNFAAETLALLGVGESSTGAAAAGGGLG--------EMKGGGGERGGLVGNDGLPPAREVVDAMVEFRRMARKHVLERNLKKNPVSGKLMKR 563
BLAST of mRNA_S-firma_F_contig11087.1442.1 vs. uniprot
Match: A0A836CJU0_9STRA (Cysteine--tRNA ligase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJU0_9STRA) HSP 1 Score: 447 bits (1149), Expect = 7.910e-145 Identity = 245/482 (50.83%), Postives = 308/482 (63.90%), Query Frame = 1
Query: 235 PTVWNAVNRCLDPFPDPSTGVLKWYSCGPTVYDSAHLGHARTYVSLDVIRRILTDYFRFDITFALGITDVDDKIIARARERGLR--DWPEIAEMAAEFERQFMEDMSELGVRPPDAVTRVTDHVPEIIGYIQRIVDNGMAYEADG---GVYFDVEGMGTDYGKLG------VQASSSTTPEEEGGSELRGKKSHKDFALWKKAKPDEPSWESPFGRGRPGWHIECSAMTHSLFGPNLDVHSGGIDLKFPHHTNEIAQCEAHGSCGGILA-------TAMAA------GDQGPAEMGGGSGGVMRKPWVRHWIHTGHLNIEGLKMSKSLKNFVTVREYLDGHSAGREAAAEDFRMFCLMHKYSSNVTFSGDRMEEASVVRARFQRFLALADATIRAARKDRPAAAALRWGQKEKWLAEETSNCRREVRLALSDDFDTPRAVRHLVSLCSLISPHLKELTEGDLG-PVVSATNFTAETLSLLGV 1605
P + ++ L+ P PS G LKWY+CGPTVYD+AHLGHARTYVSLDV+RR+LTD+F + I +A+G+TDVDDKIIARARE G DW A +A +E FMEDM LGV+ PDAV RVT+H+ I Y++R++ G AY+ +G GVYF V +G YGKLG V AS+ P K+ DFALWK AK EPSW+SPFGRGRPGWHIECSAMTH+LFG +LDVH+GGIDLKFPHHTNEIAQC+AH S G A T AA G G SGG W RHW+HTGH++IEGLKMSKSLKNF+TV+EY++ H G A++DFR+FCLMH+Y++ VTFS ++ EA VRARFQRF ++A A AAA RWG +E L + ++C ++V AL D DTP A+R L L + + + PV+S + LS +G+
Sbjct: 121 PRLHTSLTGDLEQLPPPSRGPLKWYNCGPTVYDAAHLGHARTYVSLDVLRRLLTDHFGYRILYAMGVTDVDDKIIARAREGGATGADWGPYASLARRWEASFMEDMDTLGVQRPDAVLRVTEHMDAIHDYVERLLHLGAAYKVEGPQGGVYFSVTSLGAGYGKLGNSGTVEVDASAPAVPASSAAPTESAKRDPADFALWKAAKEGEPSWDSPFGRGRPGWHIECSAMTHALFGSDLDVHTGGIDLKFPHHTNEIAQCDAHASRGLCCAPPPSPPHTGTAAEPPNTRGIIGAPNPDARSGGQQGGEWCRHWLHTGHVHIEGLKMSKSLKNFITVKEYIEAHGGGAVQASQDFRIFCLMHRYTAPVTFSYTKIAEAGAVRARFQRFFSMA------AHVGANAAALRRWGAEEADLHAKLADCTQQVHGALGCDADTPAALRLLQELSAAACKYADVRGASAVPEPVLSCARYVERVLSAMGL 596
BLAST of mRNA_S-firma_F_contig11087.1442.1 vs. uniprot
Match: A0A5D6Y496_9STRA (Cysteine--tRNA ligase n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y496_9STRA) HSP 1 Score: 380 bits (976), Expect = 6.860e-120 Identity = 212/469 (45.20%), Postives = 288/469 (61.41%), Query Frame = 1
Query: 241 VWNAVNRCLDPFPDPSTGVLKWYSCGPTVYDSAHLGHARTYVSLDVIRRILTDYFRFDITFALGITDVDDKIIARARERGLRDWPEIAEMAAEFERQFMEDMSELGVRPPDAVTRVTDHVPEIIGYIQRIVDNGMAYEA-DG-GVYFDVEGMGTDYGKL-------GVQASSSTTPEEEGGSELRG----KKSHKDFALWKKAK-PDEPSWESPFGRGRPGWHIECSAMTHSLFGPNLDVHSGGIDLKFPHHTNEIAQCEAHGSCGGILATAMAAGDQGPAEMGGGSGGVMRKPWVRHWIHTGHLNIEGLKMSKSLKNFVTVREYLDGHSAGREAAAEDFRMFCLMHKYSSNVTFSGDRMEEASVVRARFQRFLALADATIRAARKDRPAAAALRWGQKEKWLAEETSNCRREVRLALSDDFDTPRAVRHLVSLCSLISPHLKELTEGDLGPVVSATNFTAETLSLLGV 1605
V+N++ L+P D S+ LKWY+CGPTVYD AHLGHAR YVS DV+RR+L F F + +G+TDVDDKII RA+ERG+ A +A + ER F DM+ L V+PP A+TRV++H+ +I+ Y+QRI NG AYEA DG GVYF +G YGKL G ++ ++ EE GG + K+ +DFALWK AK PDEP+W+SP+GRGRPGWHIECSAMTH + G LDVH+GGIDLKFPHH NEIAQCEAH C + A + A D W +H++H GHL I+GLKMSKSLKNF++++++L HSA + FR+FCL KY SN+ FS DR+ +A + R + F A + D A+ R + + L + + + V AL +DFDTP A+ L+ L S + +L +G +++ +++ E L L G+
Sbjct: 36 VFNSLRGALEPLDD-SSKQLKWYACGPTVYDRAHLGHARAYVSQDVLRRVLERRFGFHVRLVMGVTDVDDKIIQRAKERGVG----FAALARDEERAFFRDMAALNVQPPTAITRVSEHMSDIVAYVQRIQANGFAYEAPDGSGVYFHTRALGDAYGKLDPRRSTSGSNSADASQSEEHGGGDSEAAAGVKRDPRDFALWKTAKAPDEPAWDSPWGRGRPGWHIECSAMTHYVLGAKLDVHTGGIDLKFPHHNNEIAQCEAHSCCSPLPAGSAAGNDD---------------DWCKHFVHFGHLYIQGLKMSKSLKNFISIQDFLATHSA------DHFRLFCLQFKYRSNLHFSEDRVRDAVAIADRVKSFFRSVQAYGASGDDDDDVRASKRCERADLALLDALFDAKAGVDAALRNDFDTPHALSLLLELVSRSNEYLLGRPDGPSEVLLAVSSYVLEVLDLFGL 478
BLAST of mRNA_S-firma_F_contig11087.1442.1 vs. uniprot
Match: W4H874_9STRA (Cysteine--tRNA ligase n=6 Tax=Aphanomyces astaci TaxID=112090 RepID=W4H874_9STRA) HSP 1 Score: 356 bits (913), Expect = 4.090e-111 Identity = 202/462 (43.72%), Postives = 277/462 (59.96%), Query Frame = 1
Query: 247 NAVNRCLDPFPDPSTGVLKWYSCGPTVYDSAHLGHARTYVSLDVIRRILTDYFRFDITFALGITDVDDKIIARARERGLRDWPEIAEMAAEFERQFMEDMSELGVRPPDAVTRVTDHVPEIIGYIQRIVDNGMAYEADGGVYFDVEGMGTDYGKLGVQASSSTTPEE------EGGSELRGKKSHKDFALWKKAK-PDEPSWESPFGRGRPGWHIECSAMTHSLFGPNLDVHSGGIDLKFPHHTNEIAQCEA--HGSCGGILATAMAAGDQGPAEMGGGSGGVMRKPWVRHWIHTGHLNIEGLKMSKSLKNFVTVREYLDGHSAGREAAAEDFRMFCLMHKYSSNVTFSGDRMEEASVVRARFQRFLALADATIRAARKDRPAAAALRWGQKEKWLAEETSNCRREVRLALSDDFDTPRAVRHLVSLCSLISPHLKELTEGDLGPVVSATNFTAETLSLLGV 1605
N++ LD FP S+ LKWY CGPTVYDSAHLGHAR+YVS D++RRI+T +F DI +G+TDVDDKIIA A + +A +A E F+ +++ L V ++TRV++H+PEIIGYIQ + NG AY GVYFD MG+ YGKL + +TP+E E G+ K++ +DFALWK +K PDEP WESP+GRGRPGWHIECSAMTH + G ++DVHSGG+DL+FPHH NEIAQC+A H G L + W +H++H GHL I+GLKMSKSLKNF+T+ L +SA + FR+FCL +KY+ NV FS DRM +A+ V RF F + ++A + A R + + + + C+ EV AL DFDTP A++HL+ L + + + + + + + +TL+L G+
Sbjct: 31 NSLTGRLDTFPS-SSSPLKWYVCGPTVYDSAHLGHARSYVSQDILRRIVTQHFHQDIFLVMGMTDVDDKIIAAASAQQTS----MANVARHHETAFLRNLAALNVLRVSSITRVSEHIPEIIGYIQGLDSNGFAYATSDGVYFDTVAMGSSYGKL-----APSTPQEYTDIVLEDGAVGGEKRNVRDFALWKLSKTPDEPGWESPWGRGRPGWHIECSAMTHHVLGGSIDVHSGGVDLRFPHHNNEIAQCDAYHHHQAGRYLMVGSCVCFYSGVDH----------TWCQHFVHFGHLYIKGLKMSKSLKNFITIDALLANYSA------DAFRLFCLQYKYNVNVHFSHDRMRDANAVYHRFHSFFHTLQSHVKATEAGGASEHARRVDAADFRVLDALAQCKLEVDSALRLDFDTPGALQHLLELVTATNKAWTDRPAMSVEVLCAVATYVMDTLALFGL 466
BLAST of mRNA_S-firma_F_contig11087.1442.1 vs. uniprot
Match: A0A024UW95_9STRA (Cysteine--tRNA ligase n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UW95_9STRA) HSP 1 Score: 354 bits (909), Expect = 1.090e-110 Identity = 198/460 (43.04%), Postives = 277/460 (60.22%), Query Frame = 1
Query: 244 WNAVNRCLDPFPDPSTGVLKWYSCGPTVYDSAHLGHARTYVSLDVIRRILTDYFRFDITFALGITDVDDKIIARARERGLRDWPEIAEMAAEFERQFMEDMSELGVRPPDAVTRVTDHVPEIIGYIQRIVDNGMAYEADGGVYFDVEGMGTDYGKLGV---QASSSTTPEEEGGSELRGKKSHKDFALWKKAK-PDEPSWESPFGRGRPGWHIECSAMTHSLFGPNLDVHSGGIDLKFPHHTNEIAQCEA--HGSCGGILATAMAAGDQGPAEMGGGSGGVMRKPWVRHWIHTGHLNIEGLKMSKSLKNFVTVREYLDGHSAGREAAAEDFRMFCLMHKYSSNVTFSGDRMEEASVVRARFQRFLALADATIRAARKDRPAAAALRWGQKEKWLAEETSNCRREVRLALSDDFDTPRAVRHLVSLCSLISPHLKELTEGDLGPVVSATNFTAETLSLLGV 1605
+N++ LD FP S+ LKWY CGPTVYDSAHLGHAR+YVS D++RR+LT +F +I +G+TDVDDKIIA A + + +A E F+ ++++L V ++TRV++H+PEII YIQ + NG AY GVYFD MG YGKL Q + PE+ G+ K++ +DFALWK +K P+EP WESP+GRGRPGWHIECSAMTH + G +DVHSGG+DL+FPHH NEIAQC+A H +C W +H++H GHL I+GLKMSKSLKNF+T+ L+ +SA + FR+FCL +KY+ NV FS DRM +AS + RF FL + ++AA + R + + + C+++V +A+ DFDTPRA++HL+ L S + K+ + + + + +TL+L G+
Sbjct: 31 FNSLTGQLDAFPT-SSSPLKWYVCGPTVYDSAHLGHARSYVSQDILRRVLTQHFHQEIFLVMGMTDVDDKIIAAAASQQTT----MTNIARTNEAAFLRNLADLNVLRVSSITRVSEHIPEIIAYIQGLGANGFAYVTSDGVYFDTVAMGAKYGKLAPNTPQEYDNVVPED--GAVGGEKRNVRDFALWKLSKSPEEPGWESPWGRGRPGWHIECSAMTHHVLGDAIDVHSGGVDLRFPHHNNEIAQCDAYHHHACD--------------------------HTWCKHFVHFGHLYIKGLKMSKSLKNFITIDSLLETYSA------DTFRVFCLQYKYNMNVHFSEDRMRDASAIYQRFLSFLQTLQSHVKAAAHS---PLSRRVDGVDHTVLAALAQCKQDVDIAMRHDFDTPRALQHLLDLISHTNKTWKDHPSMSVEVLCTVATYIVDTLTLFGL 448
BLAST of mRNA_S-firma_F_contig11087.1442.1 vs. uniprot
Match: K3W8N7_GLOUD (Cysteine--tRNA ligase n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3W8N7_GLOUD) HSP 1 Score: 351 bits (900), Expect = 2.570e-109 Identity = 202/451 (44.79%), Postives = 277/451 (61.42%), Query Frame = 1
Query: 295 VLKWYSCGPTVYDSAHLGHARTYVSLDVIRRILTDYFRFDITFALGITDVDDKIIARARERGLRDWPEIAEMAAEFERQFMEDMSELGVRPPDAVTRVTDHVPEIIGYIQRIVDNGMAYEA-DG-GVYFDVEGMGTDYGKLG------VQAS---SSTTPEEEGGSELRGKKSHKDFALWKKAK-PDEPSWESPFGRGRPGWHIECSAMTHSLFGPNLDVHSGGIDLKFPHHTNEIAQCEAHGSCGGILATAMAAGDQGPAEMGGGSGGVMRKP-WVRHWIHTGHLNIEGLKMSKSLKNFVTVREYLDGHSAGREAAAEDFRMFCLMHKYSSNVTFSGDRMEEASVVRARFQRFLALADATIRAARKDRPAAA-ALRWGQKEKWLAEETSNCRREVRLALSDDFDTPRAVRHLVSLCSLISPHLKELTEGDLGPVVSATNFTAETLSLLGV 1605
VLKWY+CGPTVYD AHLGHAR YVS D++RRIL FR+++ +G+TDVDDKII RA+ER + AE+A + ER F EDM L V+PP+ +TRV++H+ EII Y+++I NG AYE+ DG GVYF + +G YGKL V AS +S +++ S + KK +DFALWK +K P EPSW+SP+G GRPGWHIECSAMTH + G LD+HSGGIDL+FPHH NEIAQCEAH +CG P W +H++H GHL I+GLKMSKSLKNF++++E+L+ H+A + FR+FCL KY SN+ +S DR+ +A V+ R + F +I A +R +A+ + + + L + + AL DDF+TP + L+ L S + +L + + + S + E L LLG+
Sbjct: 15 VLKWYACGPTVYDRAHLGHARAYVSQDILRRILEKRFRYNVFLVMGVTDVDDKIIKRAQERKIH----FAELARDEERAFFEDMEALYVQPPNTITRVSEHMSEIIEYVEKIQKNGFAYESSDGSGVYFHTKELGDAYGKLDPMRNAHVSASDVQASDVEDDDAASMVTAKKDRRDFALWKASKEPGEPSWDSPWGPGRPGWHIECSAMTHHVLGDKLDLHSGGIDLRFPHHNNEIAQCEAH-NCG--------------------VDHYHHHPEWCKHFVHFGHLYIQGLKMSKSLKNFISIKEFLEDHTA------DQFRLFCLQFKYRSNLHYSEDRIRDAVVLSDRIKSFFK----SIHAYGSERSSASKSKKCDDMDLNLLNTLFATKGSIDAALRDDFNTPLVLTLLLELISRTNQYLLDRLDAPSEVLGSVAKYVLEMLDLLGL 430
BLAST of mRNA_S-firma_F_contig11087.1442.1 vs. uniprot
Match: A0A1W0AC21_9STRA (Cysteine--tRNA ligase (Fragment) n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0AC21_9STRA) HSP 1 Score: 358 bits (918), Expect = 4.240e-108 Identity = 207/460 (45.00%), Postives = 279/460 (60.65%), Query Frame = 1
Query: 247 NAVNRCLDPFPDPSTGVLKWYSCGPTVYDSAHLGHARTYVSLDVIRRILTDYFRFDITFALGITDVDDKIIARARERGLRDWPEIAEMAAEFERQFMEDMSELGVRPPDAVTRVTDHVPEIIGYIQRIVDNGMAYEADGGVYFDVEGMGTDYGKLGVQASSSTTPE--EEG-GSELRGKKSHKDFALWKKAKP-DEPSWESPFGRGRPGWHIECSAMTHSLFGPNLDVHSGGIDLKFPHHTNEIAQCEAHGSCGGILATAMAAGDQGPAEMGGGSGGVMRKPWVRHWIHTGHLNIEGLKMSKSLKNFVTVREYLDGHSAGREAAAEDFRMFCLMHKYSSNVTFSGDRMEEASVVRARFQRFLALADATIRAARKDRPAAAALRWGQKEKWLAEETSNCRREVRLALSDDFDTPRAVRHLVSLCSLISPHLKELTEGDLGPVVSATNFTAETLSLLGVGSS 1614
N+++ LDP P S+ LKWY CGPTVYDSAHLGHARTYVS D++RRILT+YFR DI +G+TDVDDKIIA A+ R + E+A E F++D++ L V ++TRV++H+PEII YI+ + NG AY G+YFD +G++YGKL A++ E EEG GSE K++ +DFALWK++K DEP WESPFGRGRPGWHIECSAMTH + G ++DVHSGGIDL FPHH NE+AQC+ + + P + W +H+IH GHL I+GLKMSKSLKNF+++ E+L SA +A FR+FCL +KY++NV FS DRM +A+V+ RF F +A R R + + + ++ AL +DFDTP + L +L SL++ +K + + V F E LLG+ S
Sbjct: 33 NSLSGTLDPLPQ-SSEPLKWYVCGPTVYDSAHLGHARTYVSQDILRRILTNYFRQDINMVMGMTDVDDKIIATAQ----RLKKSMTEVAGAHEDAFLKDLAALNVLRASSITRVSEHIPEIIQYIETLKQNGFAYATSDGMYFDTVALGSEYGKLAPNAATIEDNEVVEEGIGSE---KRNARDFALWKRSKTEDEPGWESPFGRGRPGWHIECSAMTHHVLGGSIDVHSGGIDLCFPHHNNEVAQCDGYHH-------------KTPGHV-----------WCKHFIHFGHLYIKGLKMSKSLKNFISIEEFLKEPSASSDA----FRLFCLQYKYNTNVHFSLDRMRDANVLLQRFVSFFQTVLTMTKAGNTSR------RLESADDIILVSLYQTKVKIDQALRNDFDTPEVLLQLTNLMSLVNREIK-VRHIPIEAVCQVATFVLEMCQLLGLKDS 449
BLAST of mRNA_S-firma_F_contig11087.1442.1 vs. uniprot
Match: A0A8K1CC06_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CC06_PYTOL) HSP 1 Score: 348 bits (893), Expect = 7.010e-108 Identity = 211/492 (42.89%), Postives = 286/492 (58.13%), Query Frame = 1
Query: 172 AAGRSARAATTAAATGREAGHPTVWNAVNRCLDPFPDPST---GVLKWYSCGPTVYDSAHLGHARTYVSLDVIRRILTDYFRFDITFALGITDVDDKIIARARERGLRDWPEIAEMAAEFERQFMEDMSELGVRPPDAVTRVTDHVPEIIGYIQRIVDNGMAYEA-DG-GVYFDVEGMGTDYGKLGVQASSSTTPEEEGGSELR-------GKKSHKDFALWKKAKP-DEPSWESPFGRGRPGWHIECSAMTHSLFGPNLDVHSGGIDLKFPHHTNEIAQCEAHGSCGGILATAMAAGDQGPAEMGGGSGGVMRKPWVRHWIHTGHLNIEGLKMSKSLKNFVTVREYLDGHSAGREAAAEDFRMFCLMHKYSSNVTFSGDRMEEASVVRARFQRFLALADATIRAARKDRPAAAALRWGQKEKWLAEETSNCRREVRLALSDDFDTPRAVRHLVSLCSLISPHLKELTEGDLGPVV-SATNFTAETLSLLGV 1605
A G +A A +++ T AG WN+++ +P P ++ VLKWY+CGPTVYD AHLGHAR YVS D++RR+L F+ + +G+TDVDDKII RA ERG+R E+A E ER+F DM +L V PP+A+TRV++H+ EII YIQ+I NG AY A DG GVYF+ + +G YGKL + T +E + K +DFALWK K +EPSW SP+G GRPGWHIECSAMTH + G LDVHSGGIDLKFPHH NEIAQCEAH +C + AE W RH++H GHL I GLKMSKSLKNF++++E+L HSA + FR+FCL +KY N+ +S DR+ +A VV R + FL + +++ R ++ + + + AL DDFDTP A+ ++ L + + +L + E V+ S F + L + G+
Sbjct: 16 ARGLTATRAFSSSITQTSAGDVLAWNSLSGRQEPLPRATSVTPHVLKWYACGPTVYDRAHLGHARAYVSQDILRRVLEKRFQHHVFLVMGVTDVDDKIIKRANERGMR----FDELAREEEREFFSDMEQLHVLPPNAITRVSEHMDEIIAYIQQIEQNGFAYAATDGSGVYFNTQRLGDAYGKLDPMRQTKTAGHQEYEQQTEFEDTDGFHKHDRRDFALWKATKDANEPSWPSPWGPGRPGWHIECSAMTHRVLGDRLDVHSGGIDLKFPHHNNEIAQCEAH-NCSHLH----------DAE------------WCRHFVHFGHLYIRGLKMSKSLKNFISIKEFLATHSA------DHFRLFCLQYKYRVNIHYSEDRIRDAVVVADRLRNFLR--NLHTYTSQRHTVHDVEKRCEAQDLHMLTTLFDAKVAFDAALRDDFDTPAALHGVLELIARANAYLLQHRESAPTEVLASVAAFVLDVLDVFGL 472
BLAST of mRNA_S-firma_F_contig11087.1442.1 vs. uniprot
Match: A0A6G0XXR9_9STRA (Cysteine--tRNA ligase n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XXR9_9STRA) HSP 1 Score: 347 bits (889), Expect = 1.160e-107 Identity = 198/462 (42.86%), Postives = 270/462 (58.44%), Query Frame = 1
Query: 247 NAVNRCLDPFPDPSTGVLKWYSCGPTVYDSAHLGHARTYVSLDVIRRILTDYFRFDITFALGITDVDDKIIARARERGLRDWPEIAEMAAEFERQFMEDMSELGVRPPDAVTRVTDHVPEIIGYIQRIVDNGMAYEADGGVYFDVEGMGTDYGKLGVQASSS---TTPEEEGGSELRGKKSHKDFALWKKAK-PDEPSWESPFGRGRPGWHIECSAMTHSLFGPNLDVHSGGIDLKFPHHTNEIAQCEAHGSCGGILATAMAAGDQGPAEMGGGSGGVMRKP---WVRHWIHTGHLNIEGLKMSKSLKNFVTVREYLDGHSAGREAAAEDFRMFCLMHKYSSNVTFSGDRMEEASVVRARFQRFLALADATIRAARKDRPAAAALRWGQKEKWLAEETSNCRREVRLALSDDFDTPRAVRHLVSLCSLISPHLKELTEGDLGPVVSATNFTAETLSLLGVGS 1611
N++ LDPFP T + KWY CGPTVYDSAHLGHAR+YVS D++RRILT +F ++ +G+TDVDDKIIA A ++ ++A +E F+ D++ L V A+TRV++H+ +II Y+Q + N AY GVYFD MG+ YGKL A+++ + E GS K++ +DFALWK +K P+EP W SP+GRGRPGWHIECSAMTH + G ++DVHSGGIDL+FPHH NEIAQC+ G KP W H++H GHL I+GLKMSKSLKNF+T+ L +E A+ FR+FCL +KY+ NV FS DRM +A+ V RF FL + +RA + + R +++ L + C+ V AL DFDTP A++ L+ L S + KE + + S + + L L G+ S
Sbjct: 34 NSLTGQLDPFPSSPTAI-KWYVCGPTVYDSAHLGHARSYVSQDILRRILTKHFGQEVFLVMGMTDVDDKIIASAAQKN----QPFEQVARHYEAAFLRDLASLNVLRVSAITRVSEHISDIIAYVQGLEANNFAYTTSDGVYFDTVAMGSAYGKLAPSAATADDYADADVEEGSVGSEKRNVRDFALWKFSKTPEEPGWTSPWGRGRPGWHIECSAMTHHVLGDSIDVHSGGIDLRFPHHNNEIAQCD---------------------------GFHHHKPGHNWCGHFVHFGHLYIKGLKMSKSLKNFITIDALL------KEYTADAFRLFCLQYKYNVNVHFSDDRMRDANAVLQRFHSFLQTIQSHLRA--NEATFEVSKRMEEEDYELLAALAQCKASVDAALRQDFDTPTALQALLDLISTTNKAWKERPQIPDEVLSSIATYVMQVLDLFGIES 455
BLAST of mRNA_S-firma_F_contig11087.1442.1 vs. uniprot
Match: A0A835Z463_9STRA (Cysteine--tRNA ligase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z463_9STRA) HSP 1 Score: 348 bits (892), Expect = 1.280e-107 Identity = 191/450 (42.44%), Postives = 262/450 (58.22%), Query Frame = 1
Query: 241 VWNAVNRCLDPFPDPSTGVLKWYSCGPTVYDSAHLGHARTYVSLDVIRRILTDYFRFDITFALGITDVDDKIIARARERGLRDWPEIAEMAAEFERQFMEDMSELGVRPPDAVTRVTDHVPEIIGYIQRIVDNGMAYEADGGVYFDVEGM----GTDYGKLGVQASSSTTPEEEGGSELRG-----KKSHKDFALWKKAKPDEPSWESPFGRGRPGWHIECSAM---THSLFGPN-LDVHSGGIDLKFPHHTNEIAQCEAHGSCGGILATAMAAGDQGPAEMGGGSGGVMRKPWVRHWIHTGHLNIEGLKMSKSLKNFVTVREYLDGHSAGREAAAEDFRMFCLMHKYSSNVTFSGDRMEEASVVRARFQRFLALADATIRAARKDRPAAAALRWGQKEKWLAEETSNCRREVRLALSDDFDTPRAVRHLVS-LCSLISPHLKELTEGDL 1548
V N++ R PF + WY CGPTVYD +H+GHARTY+ D++RRI+ DYF +++ + ITD+DDKII RA +R L ++A+ FE +MEDM LGVRPP+ +TRV++ VPE++ YI++++ NG AYE++G VYFDV+ G YGKL + + EG L KKS DFALWKK+K EP WESP+G GRPGWHIECS M T L+G +D+HSGG+DL+FPHH NEIAQ EAH +C WV +++HTGHL+I+G KMSKSLKNF+T+++ L H+A RM L+HKY+ + + + M A + F F + +RAA A LR G+ E L + C+ VR AL DDFDTP A++ L S L ++ +++E T+ L
Sbjct: 34 VTNSLTRTKIPFIPKEGQRVLWYMCGPTVYDGSHMGHARTYLHFDILRRIMADYFNYNVVLVMNITDIDDKIILRANQRNLN----FRDLASHFEADYMEDMKALGVRPPEHITRVSEFVPEVVAYIEQVIANGYAYESNGSVYFDVQAFHKHKGHHYGKLLPEGLGNAELMAEGEGALTSCGAGDKKSQSDFALWKKSKEGEPQWESPWGGGRPGWHIECSVMASKTFELYGDGCMDIHSGGVDLRFPHHDNEIAQAEAHYNCA---------------------------QWVNYFLHTGHLHIKGFKMSKSLKNFITIKQALQTHTA------RQIRMCFLLHKYNDPMDYGDNTMAGALAIERTFVEFFHAVKSVVRAA----TAVDELRLGEGEIALYRKLEECKSGVRAALCDDFDTPTAIKLLASDLVRTVNKYIQEKTDAGL 442 The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig11087.1442.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-firma_F_contig11087.1442.1 >prot_S-firma_F_contig11087.1442.1 ID=prot_S-firma_F_contig11087.1442.1|Name=mRNA_S-firma_F_contig11087.1442.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=614bp PPFSSARQRGQHAVMGPISCFARAVPGNCRPIGVKLSRTTALGTLRPDGIback to top mRNA from alignment at S-firma_F_contig11087:473..3885- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-firma_F_contig11087.1442.1 ID=mRNA_S-firma_F_contig11087.1442.1|Name=mRNA_S-firma_F_contig11087.1442.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=3413bp|location=Sequence derived from alignment at S-firma_F_contig11087:473..3885- (Sphaerotrichia firma ET2_F female)back to top Coding sequence (CDS) from alignment at S-firma_F_contig11087:473..3885- >mRNA_S-firma_F_contig11087.1442.1 ID=mRNA_S-firma_F_contig11087.1442.1|Name=mRNA_S-firma_F_contig11087.1442.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=3684bp|location=Sequence derived from alignment at S-firma_F_contig11087:473..3885- (Sphaerotrichia firma ET2_F female)back to top |