mRNA_S-firma_F_contig11085.1440.1 (mRNA) Sphaerotrichia firma ET2_F female
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Overview
Homology
BLAST of mRNA_S-firma_F_contig11085.1440.1 vs. uniprot
Match: A0A3M6VFA8_9STRA (Uncharacterized protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VFA8_9STRA) HSP 1 Score: 176 bits (447), Expect = 1.250e-46 Identity = 114/315 (36.19%), Postives = 165/315 (52.38%), Query Frame = 1
Query: 280 TSVTHSIRAHTTEVNACCMNDSGALVYTASSDGTCRIWDVVTGKLK-----GTLRGAAD-QPVMSVFAKGDR--VLGGCNDHKLRLWDSNTERVQATMTGHSGKIYGCQLLP--EHNLAVSCSTDRSIKLWDVGRGHCVRTIASTSIVNSL----GASADGSMIVTGHQXXXXXXXXARKGQRLAENRTAHTAAVTSSTFSLGLGMAPIILTASRDNMLRVFDGFTLMESARLSNESFMLRYNWSHATFSPDAEHAACGAASGEVLVWNTKSHELEATLSA----HKAAVSCTAWSLDGRHMASCDGEGFLALYQ 1170
T VTHSIRAH TEVN+ C N SG ++++ SSDGT R W+ G L G RG P++ V A D VLG D K +W T RV T+TGH GK+ + P H + ++ S+DRS+++WDV RG ++TI+ S N + GA+A + HQ R + + E + HT TS +F +LT SRD+ LRV D T L ++ + ++WS A+ SPD +A G ASG + VWN ++ +LE L + H A++C W DG+ +A+CD G + L++
Sbjct: 225 THVTHSIRAHATEVNSVCFNTSGKILFSGSSDGTVRAWEAEAGALSSPRALGEYRGVGTAHPLLCVRASEDGALVLGTGCDRKCFVWRVGTGRVMQTLTGHKGKVLAAEFSPVLPHEV-ITGSSDRSLRVWDVMRGVRLQTISCVSSCNDIAAPSGANATFVQFASAHQDGAVRFWDTRTRRCVQELQGVHTEQTTSVSFG-----GNELLTNSRDHSLRVIDPRTYGVLRELRHKDYQCGFDWSQASLSPDGLYALAGGASGILFVWNARTGKLEKQLKSGPTGHYGAIACCVWRPDGQGVATCDKNGVVVLWE 533
BLAST of mRNA_S-firma_F_contig11085.1440.1 vs. uniprot
Match: A0A833S375_PHYIN (WD domain G-beta repeat n=14 Tax=Phytophthora TaxID=4783 RepID=A0A833S375_PHYIN) HSP 1 Score: 176 bits (445), Expect = 1.460e-46 Identity = 134/414 (32.37%), Postives = 203/414 (49.03%), Query Frame = 1
Query: 1 QLARHRTLLQDREAECTKMRAENETYVSRMLDDKLKMVDEMNRMNALVAELERKLAVAEAGRGKPARRAGAGAATDD------LRDLAGTMPASSCAVPTSVTHSIRAHTTEVNACCMNDSGALVYTASSDGTCRIWDVVTGKLK-----GTLRGAAD-QPVMSVFAKGDR--VLGGCNDHKLRLWDSNTERVQATMTGHSGKIYGCQLLP--EHNLAVSCSTDRSIKLWDVGRGHCVRTIASTSIVNSLGA--SADGSMI--VTGHQXXXXXXXXARKGQRLAENRTAHTAAVTSSTFSLGLGMAPIILTASRDNMLRVFDGFTLMESARLSNESFMLRYNWSHATFSPDAEHAACGAASGEVLVWNTKSHELEATL----SAHKAAVSCTAWSLDGRHMASCDGEGFLALYQ 1170
+LAR R LL+ EAE +++R N + R + +K NAL+ E + + ++G PA A A + L + G + T VTHSIRAH TEVN+ C N SG ++++ SSDGT R W+ L G RG P++ V A D +LG D K +W T RV T+TGH GK+ + P H + ++ S+DRS+++WDV RG ++T++ S N + A AD + + HQ R + + E R HT TS +F +LT SRD+ L+V D T L ++ + ++W A+ SPD +A G ASG + +W+ ++ +LE L + H AV+C W DG+ +ASCD G + L++
Sbjct: 108 ELARQRALLEGSEAEGSRLRKRN-AELERQVQEK----------NALLHEWIQSNSGEKSGEPSPALVAMATQEAAESLTHLLLNEEEGLSKEGVAKLVTHVTHSIRAHATEVNSVCFNTSGKILFSGSSDGTVRAWEAEAASLSPPRALGEYRGVGTAHPLLCVRASEDGALILGTGCDRKCFVWRVGTGRVMQTLTGHKGKVLAAEFSPVTPHEV-ITGSSDRSLRVWDVVRGVRLQTVSCVSSCNDIAAPSGADSGFVQFASAHQDGAVRFWDTRTRRCVQELRGLHTEQTTSVSFG-----GSELLTNSRDHTLKVIDPRTYGVLRELHHKDYQCGFDWGQASLSPDGRYALAGGASGVLFIWSARTGKLERQLKPGPTGHHGAVACCVWRPDGQGVASCDKNGVVVLWE 504
BLAST of mRNA_S-firma_F_contig11085.1440.1 vs. uniprot
Match: A0A484EA28_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484EA28_BRELC) HSP 1 Score: 175 bits (443), Expect = 5.620e-46 Identity = 142/422 (33.65%), Postives = 206/422 (48.82%), Query Frame = 1
Query: 1 QLARHRTLLQDREAECTKMRAENETYVSRMLDDKLKMVDEMNRMNALVAE-LERKLAVAEAGR--GKPARRAGAGAATDDLR----------DLAGTMPASSCAVPTSVTHSIRAHTTEVNACCMNDSGALVYTASSDGTCRIWDVVTGKLK-----GTLRGAAD-QPVMSVFAKGDR--VLGGCNDHKLRLWDSNTERVQATMTGHSGKIYGCQLLP--EHNLAVSCSTDRSIKLWDVGRGHCVRTIASTSIVNSLGA--SADGSMI--VTGHQXXXXXXXXARKGQRLAENRTAHTAAVTSSTFSLGLGMAPIILTASRDNMLRVFDGFTLMESARLSNESFMLRYNWSHATFSPDAEHAACGAASGEVLVWNTKSHELEATLSA-----HKAAVSCTAWSLDGRHMASCDGEGFLALYQ 1170
+LARHR LL+ EAE +++R N +++L+ NAL+ E LE A +G GK A AT + D GT + S V T THSIRAH TEVN C N SG ++++ SSDGT R W+ L G RG P++ V A D VLG D K +W T RV T+TGH GK+ + P H + ++ S+DRS+++W+V RG V+TI+ S N + A A G+ + + HQ R + + E R HT TS +F +LT SRD+ L+V D T L + + ++W+ A+ SPD+ +A G SG + +WN ++ +LE L + H AV+C W DG+ +ASCD G + L++
Sbjct: 146 ELARHRALLEQSEAEGSRLRRRNTELETQVLEK-----------NALLHEWLE-----ANSGENIGKSPSPALVAMATQEAAERMSHLTLNGDDGGTAHSPSKLV-TLATHSIRAHATEVNCVCFNTSGKILFSGSSDGTVRAWEAEAASLSLPRALGEYRGVGTAHPLLCVRASEDGALVLGTGCDRKCFVWRVGTGRVMQTLTGHKGKVLAAEFSPVAPHEV-ITGSSDRSLRVWNVVRGARVQTISCVSSCNDIAAPSGASGAFVQFASAHQDGGVRFWDTRTRRCVHELRNLHTEQTTSVSFG-----GTYLLTNSRDHSLKVIDPRTYGVLRELRHLDYHCGFDWAQASLSPDSRYALAGGVSGALFIWNVRTGKLEKQLKSVNSMGHHGAVACCVWRPDGQGVASCDKNGVVVLWE 544
BLAST of mRNA_S-firma_F_contig11085.1440.1 vs. uniprot
Match: A0A225VRZ7_9STRA (Uncharacterized protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225VRZ7_9STRA) HSP 1 Score: 169 bits (429), Expect = 9.060e-46 Identity = 109/315 (34.60%), Postives = 159/315 (50.48%), Query Frame = 1
Query: 280 TSVTHSIRAHTTEVNACCMNDSGALVYTASSDGTCRIWDVVTGKLK-----GTLRGAAD-QPVMSVFAK--GDRVLGGCNDHKLRLWDSNTERVQATMTGHSGKIYGCQLLP--EHNLAVSCSTDRSIKLWDVGRGHCVRTIASTSIVNSLGA----SADGSMIVTGHQXXXXXXXXARKGQRLAENRTAHTAAVTSSTFSLGLGMAPIILTASRDNMLRVFDGFTLMESARLSNESFMLRYNWSHATFSPDAEHAACGAASGEVLVWNTKSHELEATL----SAHKAAVSCTAWSLDGRHMASCDGEGFLALYQ 1170
T VTHSIRAH TEVN+ C N SG ++++ SSDGT R W+ L G RG P++ V G VLG D K +W T RV T+TGH GK+ + P H + V+ S+DRS+++WDV RG ++T++ S N + A A + HQ R + + E HT TS +F +LT SRD+ L+V D T L ++ + ++W A+ SPD +A G ASG + +WN ++ +L+ L + H AV+C W DG+ +ASCD G + L++
Sbjct: 32 THVTHSIRAHATEVNSVCFNTSGKILFSGSSDGTVRAWEAEAASLTPPRALGEYRGVGTAHPLLCVRTSEDGSLVLGTGCDRKCFVWRVGTGRVMQTLTGHKGKVLAAEFSPVMPHEV-VTGSSDRSLRVWDVMRGVRLQTVSCVSSCNDIAAPTGYDAGFVQFASAHQDGAVRFWDTRTRRCVQELHGLHTEQTTSVSFG-----GNSLLTNSRDHSLKVVDPRTYGVLRELRHKDYQCGFDWGQASLSPDGRYALAGGASGVLFIWNVRTGKLQKQLQPGSTGHHGAVACCVWRPDGQGVASCDKNGMVVLWE 340
BLAST of mRNA_S-firma_F_contig11085.1440.1 vs. uniprot
Match: A0A0P1B442_PLAHL (WD40 repeat protein TipD n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1B442_PLAHL) HSP 1 Score: 169 bits (427), Expect = 1.080e-43 Identity = 112/315 (35.56%), Postives = 165/315 (52.38%), Query Frame = 1
Query: 280 TSVTHSIRAHTTEVNACCMNDSGALVYTASSDGTCRIWDVVTGKLK-----GTLRGAAD-QPVMSVFAKGDR--VLGGCNDHKLRLWDSNTERVQATMTGHSGKIYGCQLLP--EHNLAVSCSTDRSIKLWDVGRGHCVRTIASTSIVNSLGASA--DGSMI--VTGHQXXXXXXXXARKGQRLAENRTAHTAAVTSSTFSLGLGMAPIILTASRDNMLRVFDGFTLMESARLSNESFMLRYNWSHATFSPDAEHAACGAASGEVLVWNTKSHELEATLS----AHKAAVSCTAWSLDGRHMASCDGEGFLALYQ 1170
T VTHSIRAH TEVN+ C N SG ++++ SSDGT R W+ +L G RG P++ V A D VLG D K +W T RV T+TGH GK+ + P H + ++ S+DRS+++WD+ RG ++T++ S N + A + D + + + HQ R + + E HT +TS SLG +LT SRD+ L+V D T L ++ + ++W A+ SPD A G ASG + +WN S ++E L+ +H AV+C W DG+ ASCD G +AL++
Sbjct: 236 THVTHSIRAHATEVNSVCFNTSGKILFSGSSDGTVRAWEAERSQLTPPRALGEYRGVGTAHPLLCVRASEDGGFVLGTGCDRKCFVWRVGTGRVSQTLTGHKGKVLAAEFSPVVPHQV-ITGSSDRSLRVWDIMRGVRLQTVSCVSSCNDIAAPSGTDAAFVQFASAHQDGAVRFWDTRVVRCVQELPCVHTEQITS--VSLG---GNNLLTNSRDHTLKVIDPRTYGVLRELKHKEYQCGFDWGKASISPDGRFALAGGASGCIFIWNVGSGKVETQLAPGPTSHYGAVACCVWRPDGQGAASCDKNGMVALWE 544
BLAST of mRNA_S-firma_F_contig11085.1440.1 vs. uniprot
Match: A0A4D9D981_9STRA (ATG16 domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D981_9STRA) HSP 1 Score: 169 bits (427), Expect = 2.390e-43 Identity = 124/371 (33.42%), Postives = 176/371 (47.44%), Query Frame = 1
Query: 1 QLARHRTLLQDREAECTKMRAENETYVSRMLDDKLKMVDEMNRMNALVA-----------ELERKLAVAEAGRGKPARRAGAGAATDDLRDLAGTMPASSCAVPTSVTHSIRAHTTEVNACCMNDSGALVYTASSDGTCRIWDVVTGKLKGTLRGAADQPVMSVFAKGDRVLGGCNDHKLRLWDSNTERVQATMTGHSGKIYGCQLLPEHNLAV-SCSTDRSIKLWDVGRGHCVRTIASTSIVNSLGASADGSMIVTGHQXXXXXXXXARKGQRLAENRTAHTAAVTSSTFSLGLGMAPIILTASRDNMLRVFDGFTLMESARLSNESFMLRYNWSHATFSPDAEHAACGAASGEVLVWNTKSHELEATLS 1077
+L R R L E EC +R +NE V RM+ +K +EMNRM LV E+E AV A + + A +G TD+L P+ + RAH +VN ++G + TA DG R+W+ +G+LK TL G ++ + +GD V+GG +DH +LW + R+ T GHSG IY +L+ AV + DR+I+LWDVGR C + + S S N L DG V+ HQ R G N T A + S+ G L SRDN L++ D T L +E + NWS A FSP + + A G+A+G++ VW T S E ++ LS
Sbjct: 176 ELKRVRARLDTVEKECLDVRRQNEELVRRMVGEKSHNAEEMNRMTELVERMRAQLKARNLEIESTQAVVAAVKIEAAPSSGL--RTDEL--------------PSHCSQQFRAHAADVNDLVYCETGQWLATAGGDGKVRVWEAESGRLKATLHG--QDVMLGLDFRGDFVVGGSSDHTCKLWSLASGRLHRTFVGHSGNIYAVKLIAGDLRAVLTGGADRTIRLWDVGRASCRQVLRSGSTCNGLDIGLDGHAPVSAHQDGGLRFWDLRAG-----NPTMIVRAFETQATSVQYGQNFTALANSRDNALKIIDTRTFETLHVLRHEDYRTFLNWSRACFSPSSSYVAAGSATGQLFVWETASGETKSILS 523
BLAST of mRNA_S-firma_F_contig11085.1440.1 vs. uniprot
Match: A0A7S2XSX3_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XSX3_9STRA) HSP 1 Score: 163 bits (412), Expect = 6.940e-43 Identity = 100/305 (32.79%), Postives = 158/305 (51.80%), Query Frame = 1
Query: 274 VPTSVTHSIRAHTTEVNACCMNDSGA-LVYTASSDGTCRIWDVVTGKLKGTLRGAADQPVMSVFAKGDRVLGGCNDHKLRLWDSNTERVQATMTGHSGKIYGCQLLPEHNLAVSCSTDRSIKLWDVGRG--HCVRTIASTSIVNSLGASADGSMIVTGHQXXXXXXXXARKGQRLAENRTAHTAAVTSSTFSLGLGMAPIILTASRDNMLRVFDGFTLMESARLSNESFMLRYNWSHATFSPDAEHAACGAAS-GEVLVWNTKSHELEATLSAHKAAVSCTAWSLDG---RHMASCDGEGFLALY 1167
+PT H I+AH++EV + + G+ LV T+S+D T R+WD +G ++ TLRG + +M G V+G +D R+W +T+R+ + GH K+ +L+ ++ S DRSIKLWD+ R T+ +S N L S D +V+GH R G++ AE T HT VT + G ILT RD++L++ D + ++++ F +NWS ++SPD +AA G+ + G++++W S E LS H+A V AW G + +AS D G L L+
Sbjct: 76 IPTEAKHVIQAHSSEVTSVRYDGVGSDLVATSSNDSTVRVWDTSSGAMRATLRGGSGHAMMGCDIVGGLVVGCASDKSCRVWKLSTQRMIHQLVGHGNKVTCARLISGGKEVLTASADRSIKLWDISRNTYRQTTTLRHSSTANCLDVSYDTKTVVSGHMDGGVRFWDIRSGEKTAEIETLHTGGVTCAHLHPTNGTQ--ILTNGRDSVLKLVDIRMGSVISTMTHKDFRTPFNWSACSYSPDGVYAAAGSGTTGDIMIWRVDSGEFIKKLSTHRAGVGGFAWGKGGSCGQQVASVDTSGKLVLW 378
BLAST of mRNA_S-firma_F_contig11085.1440.1 vs. uniprot
Match: G4ZY83_PHYSP (Uncharacterized protein n=4 Tax=Phytophthora TaxID=4783 RepID=G4ZY83_PHYSP) HSP 1 Score: 162 bits (411), Expect = 1.890e-41 Identity = 109/311 (35.05%), Postives = 154/311 (49.52%), Query Frame = 1
Query: 280 TSVTHSIRAHTTEVNACCMNDSGALVYTASSDGTCRIWDVVTGKLK-----GTLRGAAD-QPVMSVFAKGDR--VLGGCNDHKLRLWDSNTERVQATMTGHSGKIYGCQLLP--EHNLAVSCSTDRSIKLWDVGRGHCVRTIASTSIVNSL----GASADGSMIVTGHQXXXXXXXXARKGQRLAENRTAHTAAVTSSTFSLGLGMAPIILTASRDNMLRVFDGFTLMESARLSNESFMLRYNWSHATFSPDAEHAACGAASGEVLVWNTKSHELEATLSAHKAAVSCTAWSLDGRHMASCDGEGFLALYQ 1170
T VTHSIRAH TEVN+ C N SG ++++ SSDGT R W+ G G RG P++ V A D VLG D K +W T RV T+TGH GK+ + P H + ++ S+DRS+++WDV RG ++T+ S N + GA A + HQ R + + E R HT TS +F +LT SRD+ LR+ D T L ++ + ++WS A+ SPD +A G ASG L+ + H AV+C W DG+ +ASCD G + L++
Sbjct: 247 THVTHSIRAHATEVNSVCFNTSGKILFSGSSDGTVRAWEAEAGSASPPRALGEYRGVGTAHPLLCVRASEDGALVLGTGCDRKCFVWRVGTGRVMQTLTGHKGKVLAAEFSPVVPHEV-ITGSSDRSLRVWDVMRGVRLQTVGCVSSCNDIAAPTGADAGFVQFASAHQDGAVRFWDTRTRRCVQEMRGLHTEQATSVSFG-----GNELLTNSRDHSLRIIDPRTYGVLRELRHKDYQCGFDWSQASLSPDGRYALAGGASG-----------LKPGPTGHHGAVACCVWRPDGQGVASCDKNGVVVLWE 540
BLAST of mRNA_S-firma_F_contig11085.1440.1 vs. uniprot
Match: A0A024GCZ8_9STRA (Uncharacterized protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GCZ8_9STRA) HSP 1 Score: 154 bits (388), Expect = 2.280e-38 Identity = 98/304 (32.24%), Postives = 157/304 (51.64%), Query Frame = 1
Query: 274 VPTSVTHSIRAHTTEVNACCMNDSGALVYTASSDGTCRIWDVVTG-KLKGTLRGAADQ-PVMSVFAK--GDRVLGGCNDHKLRLWDSNTERVQATMTGHSGKIYGCQLLPEH-NLAVSCSTDRSIKLWDVGRGHCVRTIASTSIVNSLGASADGSMIVTGHQXXXXXXXXARKGQRLAENRTAHTAAVTSSTFSLGLGMAPIILTASRDNMLRVFDGFTLMESARLSNESFMLRYNWSHATFSPDAEHAACGAASGEVLVWNTKSHELEA-TLSAHKAAVSCTAWSLDGRHMASCDGEGFLALY 1167
V + +T +RAH TEVN+ C N S ++++ASSDGT R WD+ + + G RG P++ V G+ V+G +D K +W T RV T+TGH GK+ E ++ S+DRS+++WD+ +G + T++ TS N L G MIV+ HQ R + + + HT AVTS +F+ ++T S+D+ L++ D T + ++ ++W+ A + D A G A G + +WN + ELE + A+V+C W DG+ +A CD GF+ L+
Sbjct: 214 VVSQLTKVVRAHATEVNSICFNASDKVLFSASSDGTIRAWDLASNFRSIGEYRGLGTAYPLLCVRVSKDGEFVVGTGSDRKSFVWRVGTARVFQTLTGHKGKVVAAAFSSESVREVITGSSDRSLRIWDIVKGSSIHTLSCTSSCNDL--EMTGGMIVSAHQDGSVRFWDRRTKLCVKQLESVHTEAVTSVSFTPS---GTHLVTNSKDHTLKLVDPRTYEIVRCFQHATYKCGFDWNKAAITQDGRLVAAGGALGSIHIWNAWTGELEQENQNQCPASVACCVWRADGQQLACCDKNGFVTLW 512
BLAST of mRNA_S-firma_F_contig11085.1440.1 vs. uniprot
Match: A0A6V2HHW2_9STRA (Hypothetical protein n=3 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2HHW2_9STRA) HSP 1 Score: 154 bits (389), Expect = 5.200e-38 Identity = 129/387 (33.33%), Postives = 186/387 (48.06%), Query Frame = 1
Query: 67 NETYVSRMLDDKLKMVDEMNRMNALVAELE------RKLAVAEAGR-------GKPARRAGAGAATDDLRDLAGTMPASSCAVPTSVTHSIRAHTTEVNACCMNDSGA-LVYTASSDGTCRIWDVVTGKLKGTLRGAADQPVMSVFAKGDRVLGGCNDHKLRLWDSNTERVQATMTGHSGKIYGCQLLPEHNLAVSCSTDRSIKLWDVGRGHCVRTIA--STSIVNSLGASADGSMIVTGHQXXXXXXXXARKGQRLAENRTAHTAAVTSSTFSLGLGMAPIILTASRDNMLRVFDGFTLMESARLSNESFMLRYNWSHATFSPDAEHAACGAAS-GEVLVWNTKSHELEATLSAHKAAVSCTAWSL---DGRHMASCDGEGFLALY 1167
N V R++ +K KMVDE+N+MN R L EA R G GAG + D R A+ +PT+ H I+AH E + + +G L+ T SSD T ++WD G++K TLRG + P++ V G V+G D R+W+ T+R+ + GHS K+ +LL ++ S DRSIK+WD+ R +T +S N + S D + XXXXXXXX R G+R+ + + H VTS G ILT RD++LRV D T L +E F +N+S SPD +A G+ + GEV VW +++ L AH V AW +G+ +A+ D G L L+
Sbjct: 227 NAQLVERVVSEKEKMVDEINKMNXXXXXXXXXXXXLRTLHKQEAQRKEGLDLVGNQRSHIGAGGGSSDRR-----FGATGVFLPTTPKHVIQAHPIEATSVRYDGTGLDLIATGSSDSTVKVWDTNNGQVKATLRGGSGHPMLGVDLSGGLVVGCGADKTCRVWNIRTQRMIHQLAGHSTKVTCVRLLNNEKGVITGSADRSIKVWDISRSTYKQTTTFRHSSTSNCMDVSLDSLTVFXXXXXXXXXXXXVRSGKRVLDVLSMHEGGVTSVQCHPMNGNQ--ILTNGRDSVLRVVDVRTCTAVQSLGHEDFRTAFNYSSCGISPDGAYALAGSGTTGEVFVWGLTDGKVKKKLKAHNVGVGGVAWGRGGSNGQQVATVDRNGVLMLW 606 The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig11085.1440.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-firma_F_contig11085.1440.1 >prot_S-firma_F_contig11085.1440.1 ID=prot_S-firma_F_contig11085.1440.1|Name=mRNA_S-firma_F_contig11085.1440.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=391bp QLARHRTLLQDREAECTKMRAENETYVSRMLDDKLKMVDEMNRMNALVAEback to top mRNA from alignment at S-firma_F_contig11085:2178..3854- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-firma_F_contig11085.1440.1 ID=mRNA_S-firma_F_contig11085.1440.1|Name=mRNA_S-firma_F_contig11085.1440.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=1677bp|location=Sequence derived from alignment at S-firma_F_contig11085:2178..3854- (Sphaerotrichia firma ET2_F female)back to top Coding sequence (CDS) from alignment at S-firma_F_contig11085:2178..3854- >mRNA_S-firma_F_contig11085.1440.1 ID=mRNA_S-firma_F_contig11085.1440.1|Name=mRNA_S-firma_F_contig11085.1440.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=2346bp|location=Sequence derived from alignment at S-firma_F_contig11085:2178..3854- (Sphaerotrichia firma ET2_F female)back to top |