mRNA_S-firma_F_contig1108.1433.1 (mRNA) Sphaerotrichia firma ET2_F female
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Overview
Homology
BLAST of mRNA_S-firma_F_contig1108.1433.1 vs. uniprot
Match: A0A2I6RJN1_SACJA (GDP-L-fucose synthase n=3 Tax=Phaeophyceae TaxID=2870 RepID=A0A2I6RJN1_SACJA) HSP 1 Score: 604 bits (1557), Expect = 3.340e-213 Identity = 291/313 (92.97%), Postives = 303/313 (96.81%), Query Frame = 1
Query: 1 MVTGGTGLVGSGIKEFVASDAEAQENEEYVFLSSKDGDLRDMESTKAIFEKYKPTHVIHLAARVGGLFSNLKYKVEFFRENILINDNVMECCKIYKVVKLVSCLSTCIFPDKTTYPIDETMVHNGPPHTSNEGYAYAKRMIDVLNRCYKDEYGCNFTSVIPTNIYGKGDNFSIDNGHVLPGLIHKCYKAKQQAGEDLHVWGTGSPLRQFIYNVDLGALMIWTMRSYHEVDPIILSVGEEDEVSIADAAKMIASAMEFEGNVVFDTDKSDGQFKKTACNDLLKKKNPDFKFTSMQDGLKAACDWFCENYETARK 939
MVTGGTGLVG GIKEFV SDAEA+E EEY+FLSSKDGD+R+ME TK IFEKYKPTHVIHLAARVGGLFSNLKYKVEFFRENILINDNVMECC+IYKV KLVSCLSTCIFPDKTTYPIDETMVHNGPPH SNEGYAYAKRMIDVLNRCYK+EYGCNFTSVIPTNIYGKGDNFSIDNGHVLPGLIHKCYKAKQ AGEDLHVWGTGSPLRQFIYNVDLGALMIWTMR+YHEVDPIILSVGEEDEVSIADAAKMIASAM+FEGNVVFDTDKSDGQFKKTACNDLLK+KNPDFKFT M++GLK AC+WFCENYETARK
Sbjct: 16 MVTGGTGLVGCGIKEFVESDAEAKEKEEYIFLSSKDGDIRNMEETKLIFEKYKPTHVIHLAARVGGLFSNLKYKVEFFRENILINDNVMECCRIYKVEKLVSCLSTCIFPDKTTYPIDETMVHNGPPHVSNEGYAYAKRMIDVLNRCYKEEYGCNFTSVIPTNIYGKGDNFSIDNGHVLPGLIHKCYKAKQ-AGEDLHVWGTGSPLRQFIYNVDLGALMIWTMRNYHEVDPIILSVGEEDEVSIADAAKMIASAMDFEGNVVFDTDKSDGQFKKTACNDLLKQKNPDFKFTPMKEGLKQACEWFCENYETARK 327
BLAST of mRNA_S-firma_F_contig1108.1433.1 vs. uniprot
Match: A0A836C923_9STRA (GDP-L-fucose synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C923_9STRA) HSP 1 Score: 486 bits (1251), Expect = 6.070e-167 Identity = 233/312 (74.68%), Postives = 264/312 (84.62%), Query Frame = 1
Query: 1 MVTGGTGLVGSGIKEFVASDAEAQENEEYVFLSSKDGDLRDMESTKAIFEKYKPTHVIHLAARVGGLFSNLKYKVEFFRENILINDNVMECCKIYKVVKLVSCLSTCIFPDKTTYPIDETMVHNGPPHTSNEGYAYAKRMIDVLNRCYKDEYGCNFTSVIPTNIYGKGDNFSIDNGHVLPGLIHKCYKAKQQAGEDLHVWGTGSPLRQFIYNVDLGALMIWTMRSYHEVDPIILSVGEEDEVSIADAAKMIASAMEFEGNVVFDTDKSDGQFKKTACNDLLKKKNPDFKFTSMQDGLKAACDWFCENYETAR 936
MVTGGTGLVG GI+E+V++D AQ EEY+FLSSKDG+L +M +AIFEK+ PTHVIHLAA+VGGLF+NLKYKVEF+REN+LINDNVMECC+IYKV KLVSCLSTC+FPDKTTYPIDETMVH GPPH+SNEGYAYAKRMIDV+NRCY+DEYGCNFTSVIPTNIYGK DNFSID GHV+PGLIHKC+ A++ G +WG+GSPLRQFIYNVDLGALM+W +RSY VDPIILSVGEEDEVSIADAA+M+A M + G VVFDT K+DGQFKKTA N L+ PDFKFT M GL C WF N AR
Sbjct: 1 MVTGGTGLVGQGIEEWVSTDPTAQAEEEYIFLSSKDGNLLNMAECRAIFEKHAPTHVIHLAAKVGGLFNNLKYKVEFYRENMLINDNVMECCRIYKVQKLVSCLSTCVFPDKTTYPIDETMVHAGPPHSSNEGYAYAKRMIDVMNRCYRDEYGCNFTSVIPTNIYGKHDNFSIDGGHVIPGLIHKCFLAEKN-GTPFTIWGSGSPLRQFIYNVDLGALMVWVLRSYDSVDPIILSVGEEDEVSIADAARMVAKGMAYSGEVVFDTTKADGQFKKTASNARLRALRPDFKFTPMAQGLAETCAWFKANSAVAR 311
BLAST of mRNA_S-firma_F_contig1108.1433.1 vs. uniprot
Match: A0A6T7DWV8_9STRA (GDP-L-fucose synthase n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A6T7DWV8_9STRA) HSP 1 Score: 473 bits (1217), Expect = 8.400e-161 Identity = 224/314 (71.34%), Postives = 266/314 (84.71%), Query Frame = 1
Query: 1 MVTGGTGLVGSGIKEFVASDAEAQENEEYVFLSSKDGDLRDMESTKAIFEKYKPTHVIHLAARVGGLFSNLKYKVEFFRENILINDNVMECCKIYKVVKLVSCLSTCIFPDKTTYPIDETMVHNGPPHTSNEGYAYAKRMIDVLNRCYKDEYGCNFTSVIPTNIYGKGDNFSIDNGHVLPGLIHKCYKAKQQAGEDLHVWGTGSPLRQFIYNVDLGALMIWTMRSYHEVDPIILSVGEEDEVSIADAAKMIASAMEFE-GNVVFDTDKSDGQFKKTACNDLLKKKNPDFKFTSMQDGLKAACDWFCENYETARK 939
+VTGG+GLVG GIK F+A+DAEA NEE+VFLSSKDGDL+ T+AIF +YKPTHVIHLAA+VGGLF+N K+KVEF+R+NI+INDNVMECC+I+ V KLVSCLSTCIFPDKTTYPIDETMVH+GPPH SNEGYAYAKRMIDVLNRCY DEYGCN TS+IPTNIYG DNF+I+NGHV+PGLIHK + AKQ +GEDLH+WG+G+PLRQFI++ DL AL +WT+R YH+ +PIILSVGEE+EVSI D A M+A A VVFDTDKSDGQFKKTACN L+K P +KF +++G++ + DWF NYE ARK
Sbjct: 68 LVTGGSGLVGQGIKSFIATDAEAAANEEWVFLSSKDGDLKSRTDTEAIFRRYKPTHVIHLAAKVGGLFANQKFKVEFYRDNIIINDNVMECCRIFGVRKLVSCLSTCIFPDKTTYPIDETMVHDGPPHKSNEGYAYAKRMIDVLNRCYSDEYGCNMTSIIPTNIYGPHDNFNIENGHVIPGLIHKAFLAKQ-SGEDLHIWGSGTPLRQFIFSQDLAALTVWTLRDYHDPEPIILSVGEEEEVSIKDVALMVAEASGLPLERVVFDTDKSDGQFKKTACNKKLRKLQPSYKFKPIKEGIQESVDWFFANYEAARK 380
BLAST of mRNA_S-firma_F_contig1108.1433.1 vs. uniprot
Match: A0A7S3H4T7_9STRA (GDP-L-fucose synthase n=2 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H4T7_9STRA) HSP 1 Score: 464 bits (1194), Expect = 3.230e-158 Identity = 221/313 (70.61%), Postives = 258/313 (82.43%), Query Frame = 1
Query: 1 MVTGGTGLVGSGIKEFVASDAEAQENEEYVFLSSKDGDLRDMESTKAIFEKYKPTHVIHLAARVGGLFSNLKYKVEFFRENILINDNVMECCKIYKVVKLVSCLSTCIFPDKTTYPIDETMVHNGPPHTSNEGYAYAKRMIDVLNRCYKDEYGCNFTSVIPTNIYGKGDNFSIDNGHVLPGLIHKCYKAKQQAGEDLHVWGTGSPLRQFIYNVDLGALMIWTMRSYHEVDPIILSVGEEDEVSIADAAKMIASAMEFEGNVVFDTDKSDGQFKKTACNDLLKKKNPDFKFTSMQDGLKAACDWFCENYETARK 939
+VTGGTGLVG I+ V + QE E + + SS D DLRD EST+ +FE+ KPTHVIHLAA VGGLF NLKYKVEF+REN+LINDNVMEC + + VVKLVSCLSTCIFPDKTTYPIDETMVH+GPPH+SN GYAYAKRMIDV+N+CY +EYGCN+TS+IPTNIYG DNF I++GHV+PGLIHKCYKAK+ G DL +WGTGSPLRQFIY+ DL L +W MR YH +PIILSVGEEDEVSIAD A+ +A AM+FEGN+VFDT KSDGQ+KKTA N L++ PDF+FT + GL+ ACDWF NYETARK
Sbjct: 10 LVTGGTGLVGKAIETVV--NKNPQEGETWFYASSSDADLRDRESTRKLFERVKPTHVIHLAAMVGGLFKNLKYKVEFYRENVLINDNVMECSREFNVVKLVSCLSTCIFPDKTTYPIDETMVHDGPPHSSNAGYAYAKRMIDVVNKCYNEEYGCNYTSIIPTNIYGPHDNFGIEDGHVIPGLIHKCYKAKRD-GTDLTIWGTGSPLRQFIYSEDLARLTVWVMREYHSPEPIILSVGEEDEVSIADVARAVAKAMKFEGNIVFDTTKSDGQYKKTASNKKLRELYPDFEFTPIDQGLQQACDWFVANYETARK 319
BLAST of mRNA_S-firma_F_contig1108.1433.1 vs. uniprot
Match: W7TZW1_9STRA (GDP-L-fucose synthase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TZW1_9STRA) HSP 1 Score: 474 bits (1220), Expect = 4.350e-158 Identity = 222/313 (70.93%), Postives = 264/313 (84.35%), Query Frame = 1
Query: 1 MVTGGTGLVGSGIKEFVASDAEAQENEEYVFLSSKDGDLRDMESTKAIFEKYKPTHVIHLAARVGGLFSNLKYKVEFFRENILINDNVMECCKIYKVVKLVSCLSTCIFPDKTTYPIDETMVHNGPPHTSNEGYAYAKRMIDVLNRCYKDEYGCNFTSVIPTNIYGKGDNFSIDNGHVLPGLIHKCYKAKQQAGEDLHVWGTGSPLRQFIYNVDLGALMIWTMRSYHEVDPIILSVGEEDEVSIADAAKMIASAMEFEGNVVFDTDKSDGQFKKTACNDLLKKKNPDFKFTSMQDGLKAACDWFCENYETARK 939
++TGGTGLVG GI++F++SD AQE+E YVFLSSKDGDLRD T AIFEK++P +V+HLAA VGGLF N+ KVEF+REN+LINDNVME CK +KV KLVSCLSTCIFPDKTTYPIDETM+HNGPPH SNEGYAYAKRM+DV++RCYK+EYGCNFTS+IPTNIYG DNF+I +GHV+PGL+HKCY A +QAG D +WG+G PLRQFIY+ DL L+IWTMR YH DP+ILSVGEEDEVSI A+ +A AMEF+GNVVFDT K+DGQ+KKTA N L+ PDF+FTS+++GL+ C WF ENY TARK
Sbjct: 285 LITGGTGLVGKGIEDFISSDPIAQESESYVFLSSKDGDLRDKAQTYAIFEKHRPAYVVHLAALVGGLFRNMAQKVEFYRENMLINDNVMEACKDFKVEKLVSCLSTCIFPDKTTYPIDETMIHNGPPHASNEGYAYAKRMLDVMSRCYKEEYGCNFTSIIPTNIYGPHDNFNIQDGHVIPGLVHKCYLA-EQAGTDFTIWGSGKPLRQFIYSRDLAELIIWTMREYHSADPLILSVGEEDEVSIGTLAETVAKAMEFKGNVVFDTSKADGQYKKTASNLKLRSLRPDFRFTSIEEGLEKTCAWFKENYATARK 596
BLAST of mRNA_S-firma_F_contig1108.1433.1 vs. uniprot
Match: A0A7S4EAF3_9STRA (GDP-L-fucose synthase n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4EAF3_9STRA) HSP 1 Score: 457 bits (1177), Expect = 1.170e-155 Identity = 223/313 (71.25%), Postives = 256/313 (81.79%), Query Frame = 1
Query: 1 MVTGGTGLVGSGIKEFVASDAEAQENEEYVFLSSKDGDLRDMESTKAIFEKYKPTHVIHLAARVGGLFSNLKYKVEFFRENILINDNVMECCKIYKVVKLVSCLSTCIFPDKTTYPIDETMVHNGPPHTSNEGYAYAKRMIDVLNRCYKDEYGCNFTSVIPTNIYGKGDNFSIDNGHVLPGLIHKCYKAKQQAGEDLHVWGTGSPLRQFIYNVDLGALMIWTMRSYHEVDPIILSVGEEDEVSIADAAKMIASAMEFEGNVVFDTDKSDGQFKKTACNDLLKKKNPDFKFTSMQDGLKAACDWFCENYETARK 939
MVTGG+GL G I+ V S AE +++ +VFLSSKDGDLRD ++T+AIFE+ +PTHVIHLAA VGGLF+N+ KVEF+REN+L+NDNVMECC+IYKV KLVSCLSTCIFPDKTTYPIDETM+H+G PH SNEGYAYAKRMIDV+NRCYKDEYGCNFTSVIPTNIYG DN+SI GHV+PGLIHKCY AK+ G VWGTGSPLRQFIY+ DL AL +W +RSY DPIILSV EE EV+I D A MI AMEF+G V F TDK+DGQ+KKTA N+ L PDF+FT M +GLK ACDWFC NYET RK
Sbjct: 11 MVTGGSGLYGMAIRAHVDSSAE-EKDATWVFLSSKDGDLRDRKATEAIFERVRPTHVIHLAAMVGGLFANMSKKVEFYRENMLMNDNVMECCRIYKVQKLVSCLSTCIFPDKTTYPIDETMIHDGAPHLSNEGYAYAKRMIDVMNRCYKDEYGCNFTSVIPTNIYGPHDNYSIQGGHVVPGLIHKCYLAKKN-GTPFEVWGTGSPLRQFIYSGDLAALTVWVLRSYDSTDPIILSVPEEKEVTIKDVALMIRDAMEFKGEVKFLTDKADGQYKKTASNEKLAGLRPDFQFTPMAEGLKKACDWFCANYETCRK 321
BLAST of mRNA_S-firma_F_contig1108.1433.1 vs. uniprot
Match: F0YA35_AURAN (GDP-L-fucose synthase n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YA35_AURAN) HSP 1 Score: 456 bits (1173), Expect = 4.530e-155 Identity = 221/313 (70.61%), Postives = 256/313 (81.79%), Query Frame = 1
Query: 1 MVTGGTGLVGSGIKEFVASDAEAQENEEYVFLSSKDGDLRDMESTKAIFEKYKPTHVIHLAARVGGLFSNLKYKVEFFRENILINDNVMECCKIYKVVKLVSCLSTCIFPDKTTYPIDETMVHNGPPHTSNEGYAYAKRMIDVLNRCYKDEYGCNFTSVIPTNIYGKGDNFSIDNGHVLPGLIHKCYKAKQQAGEDLHVWGTGSPLRQFIYNVDLGALMIWTMRSYHEVDPIILSVGEEDEVSIADAAKMIASAMEFEGNVVFDTDKSDGQFKKTACNDLLKKKNPDFKFTSMQDGLKAACDWFCENYETARK 939
MVTGGTGL GS IK +V A Q +VFLSSKDGDLRD T+AIFE+ KPTHV+HLAA VGGLF+N+ KVEF+REN+L+NDNVMECC+IYKV KLVSCLSTCIFPDKT+YPIDE+MVH+G PH+SNEGYAYAKRMI+V+NRCY +EYGC FT+VIPTNIYG DNFS++ GHV+PGLIHKCY AK+ G VWG+G+PLRQFIY+VDL AL +W MRSY D IILSVGEEDEVSI D A MI AM+FEG V+FDTDK+DGQ+KKTA ND LK PDFKFT M++GL+ A DWF NY+T RK
Sbjct: 10 MVTGGTGLYGSAIKTYVEQTASEQ-GATWVFLSSKDGDLRDRAQTEAIFERVKPTHVVHLAAMVGGLFANMAKKVEFYRENMLMNDNVMECCRIYKVEKLVSCLSTCIFPDKTSYPIDESMVHDGAPHSSNEGYAYAKRMIEVMNRCYAEEYGCKFTAVIPTNIYGPHDNFSVNGGHVVPGLIHKCYVAKRD-GTPFTVWGSGTPLRQFIYSVDLAALTVWVMRSYDSADSIILSVGEEDEVSIKDVALMIRDAMKFEGEVIFDTDKADGQYKKTASNDKLKGLRPDFKFTPMREGLQKAVDWFVANYDTCRK 320
BLAST of mRNA_S-firma_F_contig1108.1433.1 vs. uniprot
Match: A0A7S1UTT3_9STRA (GDP-L-fucose synthase n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1UTT3_9STRA) HSP 1 Score: 453 bits (1166), Expect = 5.580e-154 Identity = 216/313 (69.01%), Postives = 256/313 (81.79%), Query Frame = 1
Query: 1 MVTGGTGLVGSGIKEFVASDAEAQENEEYVFLSSKDGDLRDMESTKAIFEKYKPTHVIHLAARVGGLFSNLKYKVEFFRENILINDNVMECCKIYKVVKLVSCLSTCIFPDKTTYPIDETMVHNGPPHTSNEGYAYAKRMIDVLNRCYKDEYGCNFTSVIPTNIYGKGDNFSIDNGHVLPGLIHKCYKAKQQAGEDLHVWGTGSPLRQFIYNVDLGALMIWTMRSYHEVDPIILSVGEEDEVSIADAAKMIASAMEFEGNVVFDTDKSDGQFKKTACNDLLKKKNPDFKFTSMQDGLKAACDWFCENYETARK 939
MVTGG+GLVG GI+ FV A+ENEE+V+LSSKDGDLRD +ST+AIFEKYKPTHVIHLAA+VGGLF+N+ KVEFFRENILINDN+MEC +IYKV KLVS LSTCIFPDKT+YPIDETM+H+GPPH SNEGYAYAKR+ID +NR Y +EY CNFTS++PTNIYG DNFSI NGHV+PGLIHKCY AK+ +WG+G+PLRQFIY+VDL L +W MR YH DPI LSV E EV I D A +A AM+F+G ++FDT K+DGQFKKTA N L+K PD+KFTSM+DG++ + DWF NY+TARK
Sbjct: 12 MVTGGSGLVGQGIRAFVEQSG-AKENEEWVYLSSKDGDLRDRKSTEAIFEKYKPTHVIHLAAKVGGLFANMAQKVEFFRENILINDNIMECSRIYKVEKLVSMLSTCIFPDKTSYPIDETMLHDGPPHPSNEGYAYAKRLIDTMNRAYAEEYNCNFTSIVPTNIYGPHDNFSIQNGHVIPGLIHKCYLAKKN-NTPFTIWGSGTPLRQFIYSVDLAELTVWVMREYHSPDPITLSVDEAAEVPIKDVALAVAKAMKFDGEIIFDTSKADGQFKKTASNLKLRKHRPDYKFTSMEDGIQKSVDWFLANYDTARK 322
BLAST of mRNA_S-firma_F_contig1108.1433.1 vs. uniprot
Match: A0A1E7EWI6_9STRA (GDP-L-fucose synthase n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7EWI6_9STRA) HSP 1 Score: 451 bits (1160), Expect = 5.590e-153 Identity = 213/315 (67.62%), Postives = 253/315 (80.32%), Query Frame = 1
Query: 1 MVTGGTGLVGSGIKEFVASDAEAQ--ENEEYVFLSSKDGDLRDMESTKAIFEKYKPTHVIHLAARVGGLFSNLKYKVEFFRENILINDNVMECCKIYKVVKLVSCLSTCIFPDKTTYPIDETMVHNGPPHTSNEGYAYAKRMIDVLNRCYKDEYGCNFTSVIPTNIYGKGDNFSIDNGHVLPGLIHKCYKAKQQAGEDLHVWGTGSPLRQFIYNVDLGALMIWTMRSYHEVDPIILSVGEEDEVSIADAAKMIASAMEFEGNVVFDTDKSDGQFKKTACNDLLKKKNPDFKFTSMQDGLKAACDWFCENYETARK 939
MVTGG+GLVG IKE+V + E ++FLSSKDGDLRD ++T+A+FEK+KPTHVIHLAA+VGGLF+N+ KVEF+RENIL+NDN+MEC +IYKV KLV LSTCIFPDKTTYPIDETM+HNGPPH SNEGYAYAKRMID +NR Y +EY CNFTS+IPTNIYGK DNFSI+ GHV+PGLIHKCYKAKQ G +WG+G+PLRQF+Y+ DL L +W R Y+E DPIILSV E+DEV+I D A +A A FEG + FDT KSDGQ+KKTACN L+K PD+KFTSM DG++ + DWF NYET RK
Sbjct: 15 MVTGGSGLVGQAIKEYVTENDNENTLSGETWIFLSSKDGDLRDRKATEAVFEKFKPTHVIHLAAKVGGLFANMAEKVEFYRENILMNDNIMECSRIYKVQKLVGMLSTCIFPDKTTYPIDETMIHNGPPHHSNEGYAYAKRMIDTMNRAYNEEYNCNFTSIIPTNIYGKSDNFSIETGHVIPGLIHKCYKAKQD-GTPFCIWGSGTPLRQFVYSRDLAELTVWVTREYNEADPIILSVDEDDEVTIKDVALAVAKAHNFEGKIEFDTSKSDGQYKKTACNMKLRKYRPDYKFTSMPDGIQKSVDWFVANYETCRK 328
BLAST of mRNA_S-firma_F_contig1108.1433.1 vs. uniprot
Match: A0A7S3PXQ5_9STRA (GDP-L-fucose synthase n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PXQ5_9STRA) HSP 1 Score: 449 bits (1156), Expect = 1.520e-152 Identity = 214/313 (68.37%), Postives = 258/313 (82.43%), Query Frame = 1
Query: 1 MVTGGTGLVGSGIKEFVASDAEAQENEEYVFLSSKDGDLRDMESTKAIFEKYKPTHVIHLAARVGGLFSNLKYKVEFFRENILINDNVMECCKIYKVVKLVSCLSTCIFPDKTTYPIDETMVHNGPPHTSNEGYAYAKRMIDVLNRCYKDEYGCNFTSVIPTNIYGKGDNFSIDNGHVLPGLIHKCYKAKQQAGEDLHVWGTGSPLRQFIYNVDLGALMIWTMRSYHEVDPIILSVGEEDEVSIADAAKMIASAMEFEGNVVFDTDKSDGQFKKTACNDLLKKKNPDFKFTSMQDGLKAACDWFCENYETARK 939
MVTGG+GLVGS I++FV +A +ENEE+VFLSSKDGDLRD ++T+AIFEKYKPTHVIHLAA+VGGLF+N+ KVEF+REN+LINDN+ME C+I KV KLVS LSTCIFPDKT+YPIDETM+H+GPPH SNEGYA AKR+ID +NR Y +EYGCNFTS+IPTNIYG DNFSI NGHV+PGLIHKC+ AK+ +WG+G+PLRQFIY++DL L +W MR YH DPI LSV E EVSI D A +A AM+F+G VVFDTDK+DGQFKKTACN L+ PD++FT+M+DG++ A DWF NY+T RK
Sbjct: 8 MVTGGSGLVGSAIRDFV--EANPKENEEWVFLSSKDGDLRDRKATEAIFEKYKPTHVIHLAAKVGGLFANMAQKVEFYRENVLINDNIMELCRITKVQKLVSFLSTCIFPDKTSYPIDETMLHDGPPHPSNEGYALAKRLIDTMNRAYSEEYGCNFTSIIPTNIYGPHDNFSIQNGHVIPGLIHKCFIAKRDK-TPFAIWGSGTPLRQFIYSLDLAELTVWVMRDYHSPDPITLSVDEASEVSIKDVALAVAKAMKFDGEVVFDTDKADGQFKKTACNKKLRGLRPDYQFTNMEDGVQKAVDWFVANYDTCRK 317 The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig1108.1433.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-firma_F_contig1108.1433.1 >prot_S-firma_F_contig1108.1433.1 ID=prot_S-firma_F_contig1108.1433.1|Name=mRNA_S-firma_F_contig1108.1433.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=314bp MVTGGTGLVGSGIKEFVASDAEAQENEEYVFLSSKDGDLRDMESTKAIFEback to top mRNA from alignment at S-firma_F_contig1108:16463..21595- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-firma_F_contig1108.1433.1 ID=mRNA_S-firma_F_contig1108.1433.1|Name=mRNA_S-firma_F_contig1108.1433.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=5133bp|location=Sequence derived from alignment at S-firma_F_contig1108:16463..21595- (Sphaerotrichia firma ET2_F female)back to top Coding sequence (CDS) from alignment at S-firma_F_contig1108:16463..21595- >mRNA_S-firma_F_contig1108.1433.1 ID=mRNA_S-firma_F_contig1108.1433.1|Name=mRNA_S-firma_F_contig1108.1433.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=1884bp|location=Sequence derived from alignment at S-firma_F_contig1108:16463..21595- (Sphaerotrichia firma ET2_F female)back to top |