mRNA_S-firma_F_contig11020.1371.1 (mRNA) Sphaerotrichia firma ET2_F female
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Overview
Homology
BLAST of mRNA_S-firma_F_contig11020.1371.1 vs. uniprot
Match: D8LDM2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LDM2_ECTSI) HSP 1 Score: 533 bits (1372), Expect = 1.570e-186 Identity = 312/415 (75.18%), Postives = 338/415 (81.45%), Query Frame = 1
Query: 16 VAVLALLACVP--ASGFVPSARFLGTSTTAGLTRAQQRSS-TTPMPLRMAAAGDSDNNKTPWEALTTDFAKKFAVAATVAAVAFSAPGDALAARSGGRMGGRSFSSPSXXXXXXXXXXAPSRSY----GGGSTTILPVPVPMGGMGYGYGSPFGSPFGFSPFGRPGVAFYGGGFGVNPVDLLVLGGVAYGVTQLVKGGGPSFGNLDDSPPSSLGEGVDVLKLQVAINCRDRSSNSILGVLEDVSSRGDTESRSGLAEVVSEVSLALARRSADWVASSSELEHFNNRNAERAEATFSQYSVQLRTKIERETKAVVGGKNVSAERSGGRSGASGGPTVAVVSLVIALRGDAMKRLGLDRSVSSMSGLQSALQTIASGSLSDGGENVLAAEVLWTPEEPWEVLSREDAIADFPELMDL 1239
+A A LA P FV S++ L A L ++ S+ T+ +PL MA + PW+A TTD AKK AVAATVAAVAFS PG+ALAARSGGRMGGRSFSSPS APSRSY GGGSTT++P SPFGFSPFGRPGV+FYGGGFGVNPVDLLVLGGVAYGV+QLVKGGG SFGNLDDSPPSSLGEGVDVLKLQVAINCRDRSSNSILGVLEDVSSRGDTESRSGLAEVVSEVSLALARRS DWVAS+SELEHFNNRN ERAEATFSQYS+QLRTKIERET AV+GGKN+SAERSGG SGGPTVAVVSLV+ALRGDAMKRLGLDRSVS++SGL++ALQTIASGSLSDGG+NVLAAEVLWTPEEPWEVL+REDAIADFPELMDL
Sbjct: 8 LAATAALASTPHDVEAFVASSKTLRVGQPARLVASRSASAATSSLPLSMAG-------EAPWKAFTTDVAKKVAVAATVAAVAFSTPGEALAARSGGRMGGRSFSSPSRSYSAPS---APSRSYAPSYGGGSTTVVPXXXXX--XXXXXXXXXXSPFGFSPFGRPGVSFYGGGFGVNPVDLLVLGGVAYGVSQLVKGGGTSFGNLDDSPPSSLGEGVDVLKLQVAINCRDRSSNSILGVLEDVSSRGDTESRSGLAEVVSEVSLALARRSLDWVASASELEHFNNRNVERAEATFSQYSIQLRTKIERETNAVIGGKNISAERSGGGGIGSGGPTVAVVSLVVALRGDAMKRLGLDRSVSNISGLKTALQTIASGSLSDGGDNVLAAEVLWTPEEPWEVLTREDAIADFPELMDL 410
BLAST of mRNA_S-firma_F_contig11020.1371.1 vs. uniprot
Match: A0A835ZEJ7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEJ7_9STRA) HSP 1 Score: 239 bits (609), Expect = 1.920e-71 Identity = 181/423 (42.79%), Postives = 243/423 (57.45%), Query Frame = 1
Query: 22 VLALLACVPASGFVPSARFLGTSTTAGLTRAQQRSSTTPMPLRMAAAGDSDNNKTPWEALTTDFAKKFAVAATVAAVAFSAPGDALAARSGGRMGGRSFSSPSXXXXXXXXXXAPSR-----SYGGGSTTILP-------VPVPMGGMGYGYGSPFGSPFGFSPFGRPGVAFYGGGFGVNP--VDLLVLGGVAYGVTQLVKGGGPSFG-NLDDSPPSSLGEGVDVLKLQVAINCRDRSSNSILGVLEDVSSRGDTESRSGLAEVVSEVSLALARRSADWVASSSELEHFNNRNAERAEATFSQYSVQLRTKIERETKAVVGGKNVSAER--SGGRSGASGGPTVAVVSLVIALRGDAMKRLGLDRSVSSMSGLQSALQTIASGSLSDGGENVLAAEVLWTPEEPWEVLSREDAIADFPELMDL 1239
VLAL+A A F PS+ +A RSS LR A + ++N++ F K A A+ +P DA AARSGGR+GGRSFSSP+ XXXX SYGGG+TTI+P +P+P FSPFG G +Y V+LL++GGV +QL++ S G + D SLG GV V+KLQVA+N DRSS IL L+ ++ R +T SR GL+ VSEV LAL RR DW+AS+S+ E+F R+AERAEA F+ Y++ RTK+ERET + GG+++S R G R G PT AVV++V+AL+G+++KR L+RS++S S L++ L +A + +D GENVL E+LWTPEEPWE L R+ + DFPELMDL
Sbjct: 9 VLALMAA--AQAFAPSSALTPR-------QAHARSS-----LRPALSMKAENSQ------IASFTKALATFTAAMAILAGSPHDAEAARSGGRVGGRSFSSPAPTRSYSXXXXXXXXXSYGGSYGGGATTIVPYRSSTTIIPMPX------------XXXMFSPFGYGGSVYYXXXXXXXXXLVNLLLVGGVVLTASQLLRTQVSSGGWSSVDVEGGSLGRGVGVVKLQVALNASDRSSRGILAQLKSIAERAETSSRGGLSTAVSEVCLALVRRQPDWIASASQYEYFAPRSAERAEAVFNTYAIAERTKVERETVSRFGGEDLSDSRRSDGVRPEDLGKPTQAVVTIVLALKGESLKRFQLERSINSASALRNVLTQVAGDATTDDGENVLGVELLWTPEEPWESLDRQAVLEDFPELMDL 399
BLAST of mRNA_S-firma_F_contig11020.1371.1 vs. uniprot
Match: A0A7S2XX02_9STRA (Hypothetical protein (Fragment) n=2 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XX02_9STRA) HSP 1 Score: 191 bits (484), Expect = 3.740e-53 Identity = 140/335 (41.79%), Postives = 197/335 (58.81%), Query Frame = 1
Query: 241 VAAVAFSAPGDALAARSGGRMGGRSFSSPSXXXXXXXXXXAPSRSYGGG--------STTILPVPVPMGGMGYGYGSPFGSPFGFSPFGRPGVAFYGGGFGVNPVDLLVLGGVAYGVTQLVKG--GGPSFGNLDDSP-PSSLGEGVDVLKLQVAINCRDRSSNSILGVLEDVSSRGDTESRSGLAEVVSEVSLALARRSADWVASSSELEHFNNRNAERAEATFSQYSVQLRTKIERETKAVVGGKNVSAERSGGRSGASGGPTVAVVSLVIALRGDAMKRLGLDRSVSSMSGLQSALQTIASGSLSDGGENVLAAEVLWTPEEPWEVLSREDAI 1212
+A F P + +AA+SGGR+GGRSFSS +P+R Y S I+PVP G SPFG GV+++ NP++ +VLG VAYGV ++ G +G LDD PSSLG+GV VLK Q+A+N +DR++ S+L L VS T SR GL+ VVSEV+L L RRSA+W A +SEL++F R+A +AE+ F + S R+K+++E+ V G +V + G T+AVV++ +ALRGD++K V+++S Q+AL+ I++ +DGGENVLAAEVLWTPE P EVLS++D I
Sbjct: 69 IAGSLFVTPQETIAAQSGGRVGGRSFSS------------SPTRQYASPPVQQQYAPSAGIVPVPXXXSXXXX-XXXXXGFXXXMSPFGF-GVSYF------NPINAIVLGAVAYGVISIIGGLTSSGQWGTLDDEEGPSSLGQGVSVLKFQLALNVKDRTAMSLLNDLRVVSESSSTSSRFGLSNVVSEVALTLLRRSAEWEAVASELQYFGPRDASKAESAFGRISTGERSKVQQES-GQVDGMSVGGFANQKVGAGDGDATLAVVTIALALRGDSLKSFD---GVNNISQAQAALRAISADVATDGGENVLAAEVLWTPENPSEVLSKQDVI 379
BLAST of mRNA_S-firma_F_contig11020.1371.1 vs. uniprot
Match: H6WBA9_VAULI (Uncharacterized protein n=1 Tax=Vaucheria litorea TaxID=109269 RepID=H6WBA9_VAULI) HSP 1 Score: 181 bits (460), Expect = 3.580e-50 Identity = 108/246 (43.90%), Postives = 160/246 (65.04%), Query Frame = 1
Query: 514 FGVNPVDLLVLGGVAYGVTQLVKGGGP----SFGNLDDSPPSSLGEGVDVLKLQVAINCRDRSSNSILGVLEDVSSRGDTESRSGLAEVVSEVSLALARRSADWVASSSELEHFNNRNAERAEATFSQYSVQLRTKIERETKAVVGGKNVSAERSGGRSGASGGPTVAVVSLVIALRGDAMKRLGLDRSVSSMSGLQSALQTIASGSLSDGGENVLAAEVLWTPEEPWEVLSREDAIADFPELMDL 1239
F + VD+ ++G V + ++Q++ G +GN DD SSLG GV VLKLQ+ ++C+DR+ N +LG + +++ T +GL+ + SE LAL R S +W+++SS+ E+F+ RN+ +AE+ F+ YSV R+K E+ET +N S G PT AVVSLV+A+ G+ ++ LD+SV+S+S L++AL I+S SL+D G NVLAAE++WTPE+ EVL RE I DFPELMDL
Sbjct: 101 FAPSLVDVAIVGVVIFAISQVLNSGSSLTQNRWGNFDDDYFSSLGNGVSVLKLQICLDCKDRTENGVLGQIRNIA---QTSQNTGLSYMTSEACLALLRNSDNWISASSKFEYFDPRNSNKAESAFNAYSVAERSKFEKETT-----ENFSQNEIGV-------PTKAVVSLVLAINGETLRPFDLDKSVNSVSALKNALSKISSDSLTDDGMNVLAAELIWTPEDAREVLDRESIIQDFPELMDL 331
BLAST of mRNA_S-firma_F_contig11020.1371.1 vs. uniprot
Match: A0A6U4YZC0_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A6U4YZC0_HEMAN) HSP 1 Score: 143 bits (360), Expect = 4.500e-35 Identity = 119/347 (34.29%), Postives = 178/347 (51.30%), Query Frame = 1
Query: 244 AAVAFSAPGDALAARSGGRMGGRSFSSPSXXXXXXXXXXA-PSRSYGGGSTTILPVPVPMGGM-------------GYGYGSPFGSPFGFSPFGRPGVAFYGGGFGVNPVDLLVLGGVAYGVTQLVKGGGPSFGNLDDSPPSSLGEGVDVLKLQVAINCRDRSSNSILGVLEDVSSRGDTESRSGLAEVVSEVSLALARRSADWVASSSELEHFNNRNAERAEATFSQYSVQLRTKIERETKAVVGGKNVSAERSG-GRSGASGGPTVAVVSLVIALRGDAMKRLGLDRSVSSMSGLQSALQTIASGSLSDGGENVLAAEVLWTPEEPWEVLSREDAIADFPELMDL 1239
A++A + P DA AA+SGGR+GG SF + YGGG TTI+ P P G YGYG+P +G FG L+++G + + T L G G D+ E + V K+QVA NC DR NS+LGV+ ++ DT+ LA +VS+V+LAL R+ DW+ S+++E + EATFSQ S++ R KIERET V G + S R G G+ G T AV++L++ L+G + + M+ L+ +L ++ S + G +++LAAEV+WTPEEPWE ++ ++ I D+P+ + L
Sbjct: 85 ASLALAFPTDAFAAKSGGRIGGGSFKRTQMSAPRSTGASSYGGAQYGGGGTTII-APSPRVGXXXXXXXXXXXVYSSYGYGAPM---------------LFGPSFG----SLVLVGSMLFMATSLFGGWGQ-----DEE------EALSVCKVQVATNCPDRGPNSVLGVIARLADEVDTDDEDSLASMVSDVALALLRKEGDWI--SAKIESVDXXXXXXXEATFSQMSLKERAKIERETINRVRGNDKSDAREGEGKLEDIGKATSAVITLILCLQGRKIPE------ANDMASLRKSLSSVGSDVV--GNDSLLAAEVMWTPEEPWETMTPDEVILDYPDHIPL 390
BLAST of mRNA_S-firma_F_contig11020.1371.1 vs. uniprot
Match: L1J5N6_GUITC (Uncharacterized protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1J5N6_GUITC) HSP 1 Score: 132 bits (331), Expect = 1.070e-31 Identity = 115/347 (33.14%), Postives = 177/347 (51.01%), Query Frame = 1
Query: 208 DFAKKFAVAATVAAVAFSAPGDALAARSGGRMGGRSFSSPSXXXXXXXXXXAPSRSYGGGSTTILPVPVPMGGMGYGYGSPFGSPFGFSPFGRPGVAFYGGGFGVNPV--DLLVLGGVAYGVTQLVKGGGPSFGNLDDSPPSSLGEGVDVLKLQVAINCRDRSSNSILGVLEDVSSRGDTESRSGLAEVVSEVSLALARRSADWVASSSELEHFNNRNAERAEATFSQYSVQLRTKIERETKAVVGGKNVSAERSGGRSGAS-GGPTVAVVSLVIALRGDAMKRLGLDRSVSSMSGLQSALQTIASGSLSDGGENVLAAEVLWTPEEPWEVLSREDAIADFPELMDL 1239
D K+ AV A +PGDA AA+SGGR+ G F + A +RS S +G SPFG PF FYG P+ D++V+GGVAY G N+ ++ G+++ K+QVA+ C +R NS+LG + ++ D+ S+ +A +VS+VSLAL RR DWV S+ +E ++ E FSQ S R K+ERET +V GK+ S RS G T+AV+++V+A+ G + + +S L+ AL ++ + +L++ ++++AAE+LW PEEPWE L+ +D I ++P L+ L
Sbjct: 7 DSFKRVAVIALATVALLLSPGDAFAAKSGGRVAGSGFRA-----------GAAARSSMKASXXXXXXXSAQRQIGL-------SPFGVRPF------FYG------PLLTDVVVIGGVAYA--------GAMAYNMFENARQGRTSGINIAKVQVAVCCDNRGPNSLLGTVARLARDCDSRSQRSMASLVSDVSLALLRREVDWV--SAAVETKTVKDITEGENIFSQMSFTERAKVERETFNLVAGKDKSEARSSETKLEDIGKSTMAVITMVVAMEGKKLPEIRDSKS------LKEALMSLGTEALNE--DSLVAAELLWVPEEPWESLTADDVILEYPNLLSL 305
BLAST of mRNA_S-firma_F_contig11020.1371.1 vs. uniprot
Match: A0A7S4P475_GUITH (Hypothetical protein n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4P475_GUITH) HSP 1 Score: 133 bits (335), Expect = 1.740e-31 Identity = 118/351 (33.62%), Postives = 182/351 (51.85%), Query Frame = 1
Query: 208 DFAKKFAVAATVAAVAFSAPGDALAARSGGRMGGRSFS------SPSXXXXXXXXXXAPSRSYGGGSTTILPVPVPMGGMGYGYGSPFGSPFGFSPFGRPGVAFYGGGFGVNPVDLLVLGGVAYGVTQLVKGGGPSFGNLDDSPPSSLGEGVDVLKLQVAINCRDRSSNSILGVLEDVSSRGDTESRSGLAEVVSEVSLALARRSADWVASSSELEHFNNRNAERAEATFSQYSVQLRTKIERETKAVVGGKNVSAERSGGRSGAS-GGPTVAVVSLVIALRGDAMKRLGLDRSVSSMSGLQSALQTIASGSLSDGGENVLAAEVLWTPEEPWEVLSREDAIADFPELMDL 1239
D K+ AV A +PGDA AA+SGGR+ G F S XXXXXXX+ R GGG ++ P P+ SP G+ +G D++V+GGVAY G N+ ++ G+++ K+QVA+ C +R NS+LG + ++ D+ S+ +A +VS+VSLAL RR DWV S+ +E ++ E FSQ S R K+ERET +V GK+ S RS G T+AV+++V+A+ G + + +S L+ AL ++ + +L++ ++++AAE+LW PEEPWE L+ +D I ++P L+ L
Sbjct: 79 DSFKRVAVIALATVALLLSPGDAFAAKSGGRVAGSGFRAGAAARSSMKASXXXXXXXSAQRQIGGG---VIVAPPPL------------SPLGYXXXXXXXXXXXXXFYGPLLTDVVVIGGVAYA--------GAMAYNMFENARQGRTSGINIAKVQVAVCCDNRGPNSLLGTVARLARDCDSRSQRSMASLVSDVSLALLRREVDWV--SAAVETKTVKDITEGENIFSQMSFTERAKVERETFNLVAGKDKSEARSSETKLEDIGKSTMAVITMVVAMEGKKLPEIRDSKS------LKEALMSLGTEALNE--DSLVAAELLWVPEEPWESLTADDVILEYPNLLSL 396
BLAST of mRNA_S-firma_F_contig11020.1371.1 vs. uniprot
Match: A0A7S0ECJ8_9CRYP (Hypothetical protein n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0ECJ8_9CRYP) HSP 1 Score: 132 bits (331), Expect = 6.580e-31 Identity = 108/351 (30.77%), Postives = 176/351 (50.14%), Query Frame = 1
Query: 208 DFAKKFAVAATVAAVAFSAPGDALAARSGGRMGGRSFS------SPSXXXXXXXXXXAPSRSYGGGSTTILPVPVPMGGMGYGYGSPFGSPFGFSPFGRPGVAFYGGGFGVNPVDLLVLGGVAYGVTQLVKGGGPSFGNLDDSPPSSLGEGVDVLKLQVAINCRDRSSNSILGVLEDVSSRGDTESRSGLAEVVSEVSLALARRSADWVASSSELEHFNNRNAERAEATFSQYSVQLRTKIERETKAVVGGKNVSAER-SGGRSGASGGPTVAVVSLVIALRGDAMKRLGLDRSVSSMSGLQSALQTIASGSLSDGGENVLAAEVLWTPEEPWEVLSREDAIADFPELMDL 1239
D K+ + A F +PGDALAA+SGGR+ G F S +P++ GG + P P+ SP G+ + D++VLGGVAY G N+ ++ G+++ K+QVA+ C +R +S+LG +E ++ D+ S+S +A +VS+VSLAL RR DWV+++ E + + E SQ S + R K+ERET +V GK+ S R S + G T+AV+++V+A+ G + + +S L+ AL ++ + +L + + ++AAE+LW PEEPWE L+ +D + ++P L+ L
Sbjct: 80 DSFKRGVIMALAVVALFLSPGDALAAKSGGRVAGSGFRAGVAARSSMKSSSVRSAVKSPAQRQIGGGVIVAPPPL--------------SPLGYXXXXXXXXXXXXXFYAPLLTDVVVLGGVAYA--------GAMAYNMFENARQGRTSGINIAKVQVAVCCDNRGPSSLLGTVERLARECDSRSQSSMANLVSDVSLALLRREVDWVSAAVETKTVTD--ITEGENICSQMSFKERMKVERETFNLVAGKDKSEARGSEAKLDDIGKSTIAVITMVVAMEGKKLPEIRDSKS------LKEALMSLGTEALHE--DTLVAAELLWVPEEPWESLTPDDIMLEYPNLLSL 398
BLAST of mRNA_S-firma_F_contig11020.1371.1 vs. uniprot
Match: A0A7S3L727_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3L727_9STRA) HSP 1 Score: 121 bits (303), Expect = 1.090e-26 Identity = 124/357 (34.73%), Postives = 182/357 (50.98%), Query Frame = 1
Query: 247 AVAFSAPGDALAARSGGRMGGRSFSSPSXXXXXXXXXXAPSRSYGGGS-------TTILPVPVPMGGMGYGYGSPFGSPFG--------FSPFG-RPGVAFYGGGFGVNPVDLLVLGGVAYGVTQLVKGGGPS----FGNLDD---SPPSSLGEGVDVLKLQVAINCRDRSS-NSILGVLEDVSSRGDTESRSGLAEVVSEVSLALARRSADWVASSSELEHFNNRNAERAEATFSQYSVQLRTKIERETKAVVGGKN--VSAERSGGRSGASGGPTVAVVSLVIALRGDAMKRLGLDRSVSSMSGLQSALQTIASGSLSDGGENVLAAEVLWTPEEPWEVLSREDAIADFPELMDL 1239
A FSA ALAA SGGR+GG + S AP+R+Y GG T I P P +PF FSPFG GVA G + D+L G VA + V+G G S + + D + + LG G V K+ VA+ +R SIL VL +S TE R+GL + S+++L L RR + V++S+ +HF +R +AE F + S++ R+K E+E+ + G + S R G S A G T+AVV+L+I + GDA K ++SS++ ++ AL+ IAS S GE + +AE+LWTPE+ E+L+ + +AD+PEL +
Sbjct: 121 ATIFSASNPALAAMSGGRVGGGGYGRSSYSRP------APTRTYSGGGSYGYTPRTNIYVNPGPR------IVAPFXXXXXXXXXXVVPFSPFGFGAGVAV---ARGPSFFDILFFGAVAMVIANTVRGFGQSTMDQWSDTDSDYATMATPLGRGTTVAKISVALQVPNRDDPQSILNVLPRLSQSAQTERRAGLQNLTSQIALELLRRKSQIVSASTSSQHFRDRT--KAEQAFGEQSIRERSKFEKESFSRFRGADWSTSTRRMVG-SDADGKATMAVVTLLIEIDGDATKL----PNISSINSVEEALRKIASDSRV--GECLQSAEILWTPEDRSEILTEREVVADYPELRSV 453
BLAST of mRNA_S-firma_F_contig11020.1371.1 vs. uniprot
Match: B7FQ47_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FQ47_PHATC) HSP 1 Score: 113 bits (283), Expect = 5.870e-25 Identity = 88/236 (37.29%), Postives = 131/236 (55.51%), Query Frame = 1
Query: 544 LGGVAYGVTQLVKGGGPSFGNLD----DSPPSSLGEGVDVLKLQVAINCRDRSSNSILGVLEDVSSRGDTESRSGLAEVVSEVSLALARRSADWVASSSELEHFNNRNAERAEATFSQYSVQLRTKIERETKAVVGGKNVSAERSGGRSGASGGPTVAVVSLVIALRGDAMKRLGLDRSVSSMSGLQSALQTIASGSLSDGGENVLAAEVLWTPEEPWEVLSREDAIADFPELMDL 1239
LGG++ TQ++ PSF D D P LG+G+ V K+QVA+ DRS +SILG+LE +R D +S GLA +V +AL R+ DWV + S+ + F ++ +AE+TF+ ++ + K E+E E S GG T VVS++I ++GDA + D + + + L IAS + + G+NV A E+ WTP +P EVLS+ D I DFPEL+D+
Sbjct: 86 LGGISR-KTQII----PSFHMFDKVFEDEGP--LGKGITVGKIQVALTAGDRSPSSILGLLER-KARADDDSSYGLARSAYDVCMALLRKEDDWVGACSQSQWFKGGDSGKAESTFNTWADKEGAKFEKE---------YIPESS--NDDKVGGSTTVVVSMIIEIQGDATE---FDGAGYTREATKKVLSNIASDCMVEEGDNVNAVEIFWTPSDPEEVLSKNDMIIDFPELIDM 299 The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig11020.1371.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-firma_F_contig11020.1371.1 >prot_S-firma_F_contig11020.1371.1 ID=prot_S-firma_F_contig11020.1371.1|Name=mRNA_S-firma_F_contig11020.1371.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=414bp MNRRSVAVLALLACVPASGFVPSARFLGTSTTAGLTRAQQRSSTTPMPLRback to top mRNA from alignment at S-firma_F_contig11020:11..4314- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-firma_F_contig11020.1371.1 ID=mRNA_S-firma_F_contig11020.1371.1|Name=mRNA_S-firma_F_contig11020.1371.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=4304bp|location=Sequence derived from alignment at S-firma_F_contig11020:11..4314- (Sphaerotrichia firma ET2_F female)back to top Coding sequence (CDS) from alignment at S-firma_F_contig11020:11..4314- >mRNA_S-firma_F_contig11020.1371.1 ID=mRNA_S-firma_F_contig11020.1371.1|Name=mRNA_S-firma_F_contig11020.1371.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=2484bp|location=Sequence derived from alignment at S-firma_F_contig11020:11..4314- (Sphaerotrichia firma ET2_F female)back to top |