mRNA_S-firma_F_contig1102.1370.1 (mRNA) Sphaerotrichia firma ET2_F female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-firma_F_contig1102.1370.1
Unique NamemRNA_S-firma_F_contig1102.1370.1
TypemRNA
OrganismSphaerotrichia firma ET2_F female (Sphaerotrichia firma ET2_F female)
Homology
BLAST of mRNA_S-firma_F_contig1102.1370.1 vs. uniprot
Match: A0A6H5L4A6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4A6_9PHAE)

HSP 1 Score: 494 bits (1271), Expect = 6.030e-170
Identity = 271/407 (66.58%), Postives = 303/407 (74.45%), Query Frame = 2
Query:  119 MERIINGEQEPQSWAQSIQAYQRGKKELPWNPAEVPPPTYVKQFEVSRRSRDMDPILMRHRNPDVEAKRKRREEERLRIALNNAKSRQLRVEQNYDIVTHSSFLTETQASHCSDPPARPARHPDTKTSYDILNHVPREKAHSVALIYPDGEGPEVMPQKVVTVEGGKKPHSHKKRDVDVLSNRFLEKHEERMVEEKRFLREAAEEKYRRTHDYNIIAGAYYDQNKERNFVKSREQLGTMQGRAQQYRLPPSIRYGEGNGYNIINQQPKKTVVKNDS-SVADRGLSKRSRGRQVHEENIRQHERAAAISEQRTLNRPSHQRYVEVLRTGHNVISNRVFTGREGKPPPQPRAKPPVPVWDRLSRQPGQPEAVAAASRPTRE-QEGNQREK----VGSTAATTAPGSGGR 1321
            M+R+ING QEPQ+WA+SIQAY+RGK  LPWNPA+VPPPTYVKQF+VSR+SR+MDP+LMR+                                                           +RHPDT+TSYDILNHVP+EKAHSVALIYP+ +GPEV+PQKVVTVEGGKKPHSH +RDVDVLSNRFLEKHEERM EEKRFLRE AEEKYRRTHDYNIIAGAYYDQ+KER FV SRE+L TMQGRAQQYRLPPSIRYGEGNGYNIINQQPK TVV   S SV DRGLSKR+RGRQ +E+NIRQHERAAA SEQ+ LNRPSH R+VEVLRTGHNVISN+ F GREGKPPPQPRAKPP+PVWDRL  + G PEA A  SRPT E  +G Q+      +G T +  A GS GR
Sbjct:    2 MQRVINGGQEPQTWAESIQAYERGKTHLPWNPADVPPPTYVKQFDVSRKSREMDPVLMRY-----------------------------------------------------------SRHPDTRTSYDILNHVPKEKAHSVALIYPNDKGPEVLPQKVVTVEGGKKPHSHLRRDVDVLSNRFLEKHEERMTEEKRFLRERAEEKYRRTHDYNIIAGAYYDQDKEREFVNSREKLLTMQGRAQQYRLPPSIRYGEGNGYNIINQQPKTTVVDMTSASVQDRGLSKRTRGRQTYEDNIRQHERAAAASEQQILNRPSHMRHVEVLRTGHNVISNQDFAGREGKPPPQPRAKPPMPVWDRLKGEHGMPEAAALGSRPTAETNDGGQQHGNVTGLGQTDSRNADGSSGR 349          
BLAST of mRNA_S-firma_F_contig1102.1370.1 vs. uniprot
Match: D8LS80_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS80_ECTSI)

HSP 1 Score: 330 bits (845), Expect = 1.100e-106
Identity = 215/430 (50.00%), Postives = 238/430 (55.35%), Query Frame = 2
Query:  176 AYQRGKKELPWNPAEVPPPTYVKQFEVSRRSRDMDPILMRHRNPDVEAKRKRREEERLRIALNNAKSRQLRVEQNYDIVTHSSFLTETQASHCSDPPARPARHPDTKTSYDILNHVPREKAHSVALIYPDGEGPEVMPQKVVTVEGGKKPHSHKKRDVDVLSNRFLEKHEERMVEEKRFLREAAEEKYRRTHDYNIIAGAYYDQNKERNFVKSREQLGTMQGRAQQYRLPPSIRYGEGNGYNIINQQPKKTVVKNDS-SVADRGLSKRSRGRQVHEENIRQHERAAAISEQRTLNRPSHQRYVEVLRTGHNVISNRVFTGREGKPPPQPRAKPPVPVWDRLSRQPGQPEAVAAASRPTRE-QEGNQREK----VGSTAATTAPGSGGRDLKERGGNGDSSRRSRCAGE----DNGDRGDEQGRSRRQLPP 1435
            AY+RGK  LPWNPA+VPPPTYVKQF+VSR+SR+MDP+LMRHR                                                                                                                          FLEKHEERM EEKRFLRE AEEKYRRTHDYNIIAGAYYDQ+KER FV SR++L TMQGRAQQYRLPPSIRYGEGNGYNIINQQPKKTVV   S SV DRGLSKR+RGRQ +E+NIRQHERAAA SEQRTLNRPSH R+VEVLRTGHNVISN+ F GREGKPPPQPRAKPP+PVWDRL  +   PEA A  S PT E  +G Q+      +G T +  A GS GR                C G+      G RG EQ  +RR+ PP
Sbjct:    5 AYERGKTHLPWNPADVPPPTYVKQFDVSRKSREMDPVLMRHR--------------------------------------------------------------------------------------------------------------------------FLEKHEERMTEEKRFLRERAEEKYRRTHDYNIIAGAYYDQDKERKFVNSRDKLLTMQGRAQQYRLPPSIRYGEGNGYNIINQQPKKTVVDMTSASVQDRGLSKRTRGRQTYEDNIRQHERAAAASEQRTLNRPSHMRHVEVLRTGHNVISNQDFAGREGKPPPQPRAKPPMPVWDRLKGKHEMPEAAAIGSMPTAETNDGGQQHGDVTGLGQTNSRDAGGSSGR----------------CGGQVPASPGGARGTEQPGTRREAPP 296          
BLAST of mRNA_S-firma_F_contig1102.1370.1 vs. uniprot
Match: A0A836CLH1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLH1_9STRA)

HSP 1 Score: 174 bits (440), Expect = 9.100e-46
Identity = 119/349 (34.10%), Postives = 189/349 (54.15%), Query Frame = 2
Query:  155 SWAQSIQAYQRGKKELPWNPAEVPPPTYVKQFEVSRRSRDMDPILMRHRNPDVEAKRKRREEERLRIALNNAKSRQLRVEQNYDIVTHSSFLTETQASHCSDPPARPARHPDTKTSYDILNHVPREKAHSVALIYPDGEGPEVMPQKVVTVEGGKKPHSHK-KRDVDVLSNRFLEKHEERMVEEKRFLREAAEEKYRRTHDYNIIAGAYYDQNKERNFVKSREQLGTMQGRAQQYRLPPSIRYGEGNGYNIINQQPKKTVVKND-SSVADRGLSKRSRGRQVHEENIRQHERAAAISEQRTLNRPSHQRYVEVLRTGHNVISNRVFTGREGKPPPQPRAKPPVPVWDRL 1195
            +W + +Q Y   K +LPWNP  VPP TYV  ++VSR++R++DP+L ++R+ D EA + R+E  + +  L    ++Q + +Q +DI+T++S L+   A    D   R  + PD++T Y+I+++   EKA            P          +  K   +H  +RD +VLSN ++  H  R   E+     AA+  Y RTHD+N + G YYD NKE  +  +   L   QG AQ  RLP S+ Y EG  Y+II+++PK  V +++  SV D GLSKR+ GR   E ++ +     A +    LNR S++R VE    G + ++N  + GR  +  P+ R + P   ++ L
Sbjct:    5 TWGEDLQLYAAAKSQLPWNPESVPPVTYVNTYDVSRKARELDPVLGKYRDADKEAAQARKEIAKCQQLLQAGMTKQAKTQQQFDILTNAS-LSRAPAQQTHDDYRRQRKEPDSRTPYNIISNT--EKAPGSRSAQQQSRRPN---NDRTENQRAKPSRAHAIQRDFNVLSNCYVANHSARTRSEQEAALTAAKAAYARTHDFNALEGRYYDANKESAYQAAVSSLKPAQGLAQARRLPRSVVYSEGQLYDIISKKPKDPVRESEMDSVPDPGLSKRAAGRAFLERSLERRRAKEAAATAAALNRVSYKREVEASGKGFDPLTNEGYAGRCARALPRGRNRTPRKAFETL 347          
BLAST of mRNA_S-firma_F_contig1102.1370.1 vs. uniprot
Match: A0A7S1CID5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CID5_9STRA)

HSP 1 Score: 139 bits (350), Expect = 2.270e-33
Identity = 106/349 (30.37%), Postives = 174/349 (49.86%), Query Frame = 2
Query:  155 SWAQSIQAYQRGKKELPWNPAEVPPPT-YVKQFEVSRRSRDMDPILMRHRNPDVEAKRKRREEERLRIALNNAKSRQLRVEQNYDIVTHSSFLTETQASHCSDPPA--RPARHPDTKTSYDILNHVPREKAHSVALIYPDGEGPEVMPQKVVTVEGGKKPHSHKKRDVDVLSNRFLEKHEERMVEEKRFLREAAEEKYRRTHDYNIIAGAYYDQNKERNFVKSREQLGTMQGRAQQYRLPPSIRYGEGNGYNIINQQPKKTVVKNDSSVADRGLSKRSRGRQVHEENIRQHERAAAISEQRTLNRPSHQRYVEVLRTGHNVISNRVFTGREGKPPPQPRAKPPVPVWDR 1192
            +W   I+ Y+  K +  WN  EV     +V ++E SR  R+ DPIL  +R+   E+ +   +  +  +ALN A+ +QLR  Q YDI+   +F+  T+     +PPA  RP    D++T+Y+I+ ++   + H +    P G+ P   P                KRD D++SNR++E HEE+   ++   R+AA E++ +T  +N +  AYYD+ KE  F ++  +     G  Q  RLPPS++  EG  YN+++ + +               SK   G +V      + E+   I EQRTL+R S+QR  E  + G+N+++N  F G       + R+  P   W R
Sbjct:   21 NWGDDIRRYKAAKTDAAWNVTEVAKSIKHVTRYEKSREEREFDPILQHYRDDGKESAKVTLDATKKLVALNRARDKQLRYTQTYDII---NFVPRTK-----EPPAQERPPPRADSRTNYNIITNMGLHEHHYL----PPGQRP---PXXXXXXPKETLASRTTKRDFDLISNRYMEAHEEKDAVDREMQRQAAAERFWQTRSFNPVTCAYYDEKKEDAFKQTVAEETRTWGSKQFARLPPSVKVSEGVAYNVLSMEERNAEAMRARDRIKAKASKARIGPEVEARVKARAEKVEDIMEQRTLHRVSYQRDREARKHGYNLLTNAPFQGLNSTTVFESRSAKPTSAWAR 354          
BLAST of mRNA_S-firma_F_contig1102.1370.1 vs. uniprot
Match: A0A833SVY2_PHYIN (Uncharacterized protein n=2 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833SVY2_PHYIN)

HSP 1 Score: 125 bits (315), Expect = 5.170e-28
Identity = 101/355 (28.45%), Postives = 175/355 (49.30%), Query Frame = 2
Query:  155 SWAQSIQAYQRGKKELPWNPAEVPPPTYVKQFEVSRRSRDMDPILMRHRNPDVEAKRKRREEERLRIALNNAKSRQLRVEQNYDIVTHSSFLTETQASHCSDPPAR-PARHPDTKTS---YDILNHVPREKAHSVALIYPDGEGPEVMPQKVVTVEGGKKPHSHKKRDVDVLSNRFLEKHEERMVEEKRFLREAAEEKYRRTHDYNIIAGAYYDQNKERNFVKSREQLGTMQGRAQQYRLPPSIRYGEGNGYNIINQQ---PKKTVVKNDSSVADRGLSK-RSRGRQVHEENIRQHERAAAISEQRTLNRPSHQRYVEVLRTGHNVISNRVFTGREGKPPPQPRAKPPVPVWDRL 1195
            +WA+ +Q Y+  K  LPW P +  P  YV ++E SR  R+ D +L R R+ D E   ++RE   L+  L   +++QLR  Q ++++++     E       DP  + P  HP+ K S   Y+I+ + P    H+     P   G               KPH    R+ ++L+N++ ++H+ R  +E    +  A +KY +T  ++ I   + D+ +E+ F+K R++   + G+ +   LPP  ++ EG  YNI+NQQ   P K    N+     R L+K +    +     + + +RA     Q  LNR +H+R+ E    G++V+SN+ + GR+ KP   PR    +  W  +
Sbjct:   39 TWAEDVQNYRAAKSVLPWQPGQQQPVKYVTRYEKSREEREYDALLGRFRSEDKEMGLQQRESTELKRNLEKGRAKQLRTIQRFNMISN-----EPMYPGAKDPTDKQPVAHPNRKNSAADYNIVTNFP----HNGTSASPPATGS----------SPSHKPH----REFNILTNKYFDRHDARFNKEAAEAKRIAAQKYFKTRTFDPIRITFLDEEREKEFLKRRQEQQQVHGKDRVLVLPPREQFSEGRVYNILNQQVINPNKLATINNKD--QRTLNKIKKTAFETKMREVGETQRARDTDLQ--LNRFAHERHTESHVHGYDVLSNQPYAGRDAKPLAHPRTHAALTPWQTI 366          
BLAST of mRNA_S-firma_F_contig1102.1370.1 vs. uniprot
Match: A0A485LLK6_9STRA (Aste57867_22233 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LLK6_9STRA)

HSP 1 Score: 105 bits (263), Expect = 3.320e-21
Identity = 100/357 (28.01%), Postives = 170/357 (47.62%), Query Frame = 2
Query:  152 QSWAQSIQAYQRGKKELPWNPAEVPPPTYVKQFEVSRRSRDMDPILMRHRNPDVEAKRKRREEERLRIALNNAKSRQLRVEQNYDIVTHSSFLTETQASHCSDPPARPARHPDTKTSYDILNHVPREKAHSVALIYPDGEGPEVMPQKVVTVEGGKKPHSHKKRDVDVLSNRFLEKHEERMVEEKRFLREAAEEKYRRTHDYNIIAGAYYDQNKERNFVKSREQLGTMQGRAQQYRLPPSIRYGEGNGYNIINQ---QPKKTVVKNDSSVADRGLSKRSRGRQVHEENIRQHERAAAI---SEQRTLNRPSHQRYVEV---LRTGHNVISNRVFTGREGKPPPQPRAKPPVPVWDRL 1195
            QSW + I+ Y+  K  +PW P +  P  ++ ++E SR  R+ D I  ++R+   E   K  E ++   AL +AK +Q R  Q ++++ HSS   E        P     R P+T+  Y+I+NH      H +A+       P+ + +K+V  +       H  R   V+SN++   H++R   E    +E A  K+ +TH +N +   YYD  KE  F+ +R+    + G  +   LP   ++     YN++N    +P+K   K  ++V +R L+     +  H+     H RA  +   +E R+LNR SH R  ++   +R   + ++N+ F GR  K     R  P   VW R+
Sbjct:   12 QSWGEDIRIYKASKAVVPWRPEQREPVRHITRYEKSREEREFDLIRAQYRDVQREGATKDLEIKQSMQALVDAKIKQSRYVQKFNLINHSSAEPE--------PVDVTLRPPNTRVRYNIVNH------HELAVAPVHEAPPDALGKKMVESQ-------HLGRPFSVISNKYHTDHDQRARAEAVHQKETATVKFNKTHTFNPLLVRYYDCEKEAAFLVARDAHAKLHGLDRDDLLPHGEQFCASRLYNLVNHTVLKPEK--FKTVTNVDNRRLNVMKATKINHDI----HARAQVLEDLTETRSLNRISHARNSQIADNIRASFDPVTNQPFEGRLRKARVPVRTHPKSNVWTRV 341          
BLAST of mRNA_S-firma_F_contig1102.1370.1 vs. uniprot
Match: W4G3P3_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4G3P3_9STRA)

HSP 1 Score: 105 bits (262), Expect = 4.210e-21
Identity = 95/353 (26.91%), Postives = 160/353 (45.33%), Query Frame = 2
Query:  155 SWAQSIQAYQRGKKELPWNPAEVPPPTYVKQFEVSRRSRDMDPILMRHRNPDVEAKRKRREEERLRIALNNAKSRQLRVEQNYDIVTHSSFLTETQASHCSDPPARPARHPDTKTSYDILNHVPREKAHSVALIYPDGEGPEVMPQKVVTVEGGKKPHSHKKRDVDVLSNRFLEKHEERMVEEKRFLREAAEEKYRRTHDYNIIAGAYYDQNKERNFVKSREQLGTMQGRAQQYRLPPSIRYGEGNGYNIINQQPKKTVVKNDSSVADRGLSKRS----RGRQVHEENIRQHERAAAI---SEQRTLNRPSHQRYVEVLRTGHNVISNRVFTGREGKPPPQPRAKPPVPVWDR 1192
            SW + +Q Y+  K  +PW P +  P  ++ ++E SR  R+ D +  ++R+   E+  K +E +    AL +AK +Q R  Q ++++ H S   E        P     R P+T+  Y             V +  PD  G +++  +            H  R   V+SN++   HE R   +   L++ A  K+ +THD+N +   YYD+ KE  FV +R     M G  +  +LP   ++  G  YNI+N +    +++ D   A   +  R     +  Q+   N    ERA A    +++R LNR +H+R  +    G + ++N+ F GR  KP    R +P    W R
Sbjct:   13 SWGEDLQIYKASKTVIPWRPEQQQPVRHITRYEKSREEREYDLVRAQYRDVQRESATKDKEIKDQMQALVDAKVKQSRYVQKFNLINHHSAEVE--------PVESALRPPNTRAPYXXXXXX-XXXXXXVHVAPPDSLGKKMVDSQ------------HLGRPFSVISNKYHTNHESRSAADAVRLQDMARTKFNKTHDFNPLLVRYYDETKETAFVAARTVQNQMHGVDRDEKLPHGEQFSAGKLYNIVNHK----ILRPDKYEAVTNVGNRRLNCMKSTQI---NKAVRERADAFEDKTQERALNRIAHERNGQAYVHGFDPVTNQPFEGRLRKPKVPLRTQPKPAAWAR 337          
BLAST of mRNA_S-firma_F_contig1102.1370.1 vs. uniprot
Match: F0XZ19_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XZ19_AURAN)

HSP 1 Score: 103 bits (257), Expect = 2.700e-20
Identity = 93/357 (26.05%), Postives = 172/357 (48.18%), Query Frame = 2
Query:  155 SWAQSIQAYQRGKKELPWNP-AEVPPPTYVKQFEVSRRSRDMDPILMRHRNPDVEAKRKRREEERLRIALNNAKSRQLRVEQNYDIVTHSSFLTETQASHCSDPPARPARHPDTKTSYDILNHVPREKAHSVALIYPDGEGPEVMPQKVVT---VEGGKKPHSHKKRDVDVLSNRFLEKHEERMVEEKRFLREAAEEKYRRTHDYNIIAGAYYDQNKERNFVKSREQLGTMQGRAQQYRLPPSIRYGEGNGYNIINQQPK-KTVVKNDSSVADRGLSKR---SRGRQVHEENIRQHERAAAISEQRTLNRPSHQRYVEVLRTGHNVISNRVFTGREGKPPPQPRAKPPVPVWDRLSR 1201
            SW  ++++YQ  +    W+   E  PP   +     +RS+  +P+L RH +P  E   +    E     L  A  +Q      +DIVTH     +T A     P  +P   PD++TS++I+NH  ++              P   P+K V     E G  P S K+R+ D++SN+++  H+ R + ++   + +A++ +  THD++ + G YYD  KE +F K R  L ++ G+    RLPP+++Y EG  Y+I++   K +  ++  S V +R ++ +   S   ++ + ++++ +R  + +  R                G++V+++    GR  +P    R K P   W +LS+
Sbjct:   13 SWGDTLKSYQAERGLASWDKLGEAHPPKDHRVTHYEKRSK-FNPLLQRHYDPRRERSARNSAAEADGAKLAAALDKQ----PPFDIVTHEFRSGKTPAERA--PSNKP---PDSRTSWNIINHKAKD--------------PRAPPRKSVVDARAESGLLPASWKRREFDIVSNKYISDHKGRTLRDRTEAKHSAQKLFWETHDFDPLLGRYYDAGKEADFAKQRAVLSSIAGQGSVARLPPAVQYCEGAAYDIVSHAVKDQAKLEVASGVGNRAIASKKGPSVEAELRDRSVKRDDRDKSRALARFAKTVDFCEREGGRHHGYDVLTHESHVGRLARPMATMRIKKPDGPWQQLSK 345          
BLAST of mRNA_S-firma_F_contig1102.1370.1 vs. uniprot
Match: A0A7S3NS64_EUPCR (Hypothetical protein (Fragment) n=1 Tax=Euplotes crassus TaxID=5936 RepID=A0A7S3NS64_EUPCR)

HSP 1 Score: 100 bits (248), Expect = 4.490e-19
Identity = 98/359 (27.30%), Postives = 174/359 (48.47%), Query Frame = 2
Query:  158 WAQSIQAYQRGKKELPWNPAEVPPPTYVKQFEVSRRSRDMDPILMRHRNPDVEAKRKRREEERLRIALNNAKSRQLRVEQNYDIVTHSSFLT--ETQASHCSDPPARPARHPDTKT--SYDILNHVPREKAHSVALIYPDGEGPEVMPQKVVTVEGGKKPHSHKKRDVDVLSNRFLEKHEERMVEEKRFLREAAEEKYRRTHDYNIIAGAYYDQNKERNFVKSREQLGTMQGRAQQYRLPPSIRYGEGNGYNIINQQPKKTVVKNDSSVADRGLSKRSRGRQVHEE-NIRQHERAAAISEQR-----TLNRPSHQRYVEVLRTGHNVISNRVFTGR--EG-KPPPQPRAKPPVPVWDRL 1195
            W  ++Q Y   K  L +N   V    +V+  E+ +     +PIL ++ +  VE + K+ E + L   L   K R LR EQ +D++     L   E Q  +    P        TKT   Y+IL+++   + H +    P  E P+        V   KK      RD ++++NR+LE ++E++V +K   R  A +KY +THDY+ +   YYD +KE+ FV  RE    + G+    +LP S +  EG  YN IN +     ++++  + +R L ++++ ++  +  ++ +H R   + E       +LN+ + QR+ +    G ++++N+ F     EG K   +P  KPP   W ++
Sbjct:   11 WRDTVQNYHMSKTNLQFNQEPV---KHVRHHEIKKIETMYNPILQKYSDSSVENQVKQAENDNLIDTLAKNKDRALRYEQTFDVINFDDKLKGLENQEGYPKPKPKNTNIVGGTKTFTEYNILSNLSFNEHHYL----PPEERPKAPSDDKEKVT--KKVTKTGLRDYNIITNRYLELNDEKVVVDKEIERLNAAKKYWKTHDYDPVNTQYYDPDKEQEFVDEREHNAKIHGQDWVQKLPKSWKE-EGGLYNPINGK-----IEDEKRLWERDLKEKNKRKRYEKRYDMERHARKVGLGEDERQQKISLNKVNIQRFRDTTERGFDILTNKQFNNPVDEGSKTLHEPFVKPPASTWTKI 354          
BLAST of mRNA_S-firma_F_contig1102.1370.1 vs. uniprot
Match: A0A024TUA9_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TUA9_9STRA)

HSP 1 Score: 97.8 bits (242), Expect = 1.890e-18
Identity = 90/334 (26.95%), Postives = 154/334 (46.11%), Query Frame = 2
Query:  155 SWAQSIQAYQRGKKELPWNPAEVPPPTYVKQFEVSRRSRDMDPILMRHRNPDVEAKRKRREEERLRIALNNAKSRQLRVEQNYDIVTHSSFLTETQASHCSDPPARPARHPDTKTSYDILNHVPREKAHSVALIYPDGEGPEVMPQKVVTVEGGKKPHSHKKRDVDVLSNRFLEKHEERMVEEKRFLREAAEEKYRRTHDYNIIAGAYYDQNKERNFVKSREQLGTMQGRAQQYRLPPSIRYGEGNGYNIINQQ---PKKTVVKNDSSVADRGLSKRSRGRQVHEENIRQHERAAAISEQRTLNRPSHQRYVEVLRTGHNVISNRVFTGREGKP 1147
            SW + +Q Y+  K  LPW P +  P  ++ ++E SR  R+ D I  ++R+   EA  K RE +    AL +AK++Q R  Q ++++ H +   E        P     R P+T+  Y               +   DG G +++  +            H  R  +V+SN++   H+ R   +   L E A  K+ +THD+N +   YYD  KE  FV++R     + G  +  +LP   ++  G  YNI+N +   P+K      ++V +R L    +  Q+++    + E       +R LNR +H+R  +    G + ++N+ F GR  KP
Sbjct:   13 SWGEDLQIYKASKAILPWRPDQQHPVRHITRYEKSREEREYDLIQAQYRDVQREAATKDREIKARMQALADAKAKQSRYVQKFNLINHHTAEVE--------PVESALRPPNTRAPYXXXXXX-XXXXXXXQIAPSDGLGKKMVDSQ------------HLGRPFNVISNKYHTNHDARSQADAARLHEHAIAKFNKTHDFNPLLVRYYDSTKEMAFVEARAAKERVHGIDRDDKLPHGEQFSAGKLYNILNHEILRPEKYEAV--TNVGNRRLHC-MKSTQMNKAIRARAEALEDAMHERALNRIAHERNAQAYVHGFDPVTNQPFEGRLRKP 322          
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig1102.1370.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L4A6_9PHAE6.030e-17066.58Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LS80_ECTSI1.100e-10650.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A836CLH1_9STRA9.100e-4634.10Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S1CID5_9STRA2.270e-3330.37Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
A0A833SVY2_PHYIN5.170e-2828.45Uncharacterized protein n=2 Tax=Phytophthora infes... [more]
A0A485LLK6_9STRA3.320e-2128.01Aste57867_22233 protein n=1 Tax=Aphanomyces stella... [more]
W4G3P3_9STRA4.210e-2126.91Uncharacterized protein n=2 Tax=Aphanomyces astaci... [more]
F0XZ19_AURAN2.700e-2026.05Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A7S3NS64_EUPCR4.490e-1927.30Hypothetical protein (Fragment) n=1 Tax=Euplotes c... [more]
A0A024TUA9_9STRA1.890e-1826.95Uncharacterized protein n=1 Tax=Aphanomyces invada... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_F_contig1102contigS-firma_F_contig1102:20454..23155 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef902022-09-19
OGS1.0 of Sphaerotrichia firma ET2_F female2021-02-24
Properties
Property NameValue
Seed ortholog4787.PITG_11222T0
Max annot lvl4776|Peronosporales
Evalue3.75e-30
EggNOG OGs2AXZZ@1|root,2S023@2759|Eukaryota,3QDTH@4776|Peronosporales
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-12_004500.1
Exons6
Model size1435
Cds size1317
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815650.4450026-CDS-S-firma_F_contig1102:20453..209721622815650.4450026-CDS-S-firma_F_contig1102:20453..20972Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig1102 20454..20972 -
1696949478.9778674-CDS-S-firma_F_contig1102:20453..209721696949478.9778674-CDS-S-firma_F_contig1102:20453..20972Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig1102 20454..20972 -
1622815650.4598458-CDS-S-firma_F_contig1102:21308..215581622815650.4598458-CDS-S-firma_F_contig1102:21308..21558Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig1102 21309..21558 -
1696949478.995221-CDS-S-firma_F_contig1102:21308..215581696949478.995221-CDS-S-firma_F_contig1102:21308..21558Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig1102 21309..21558 -
1622815650.473422-CDS-S-firma_F_contig1102:21809..220181622815650.473422-CDS-S-firma_F_contig1102:21809..22018Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig1102 21810..22018 -
1696949479.0153327-CDS-S-firma_F_contig1102:21809..220181696949479.0153327-CDS-S-firma_F_contig1102:21809..22018Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig1102 21810..22018 -
1622815650.4861813-CDS-S-firma_F_contig1102:22314..224711622815650.4861813-CDS-S-firma_F_contig1102:22314..22471Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig1102 22315..22471 -
1696949479.028817-CDS-S-firma_F_contig1102:22314..224711696949479.028817-CDS-S-firma_F_contig1102:22314..22471Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig1102 22315..22471 -
1622815650.5010805-CDS-S-firma_F_contig1102:22696..228211622815650.5010805-CDS-S-firma_F_contig1102:22696..22821Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig1102 22697..22821 -
1696949479.0377147-CDS-S-firma_F_contig1102:22696..228211696949479.0377147-CDS-S-firma_F_contig1102:22696..22821Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig1102 22697..22821 -
1622815650.5111182-CDS-S-firma_F_contig1102:22980..230371622815650.5111182-CDS-S-firma_F_contig1102:22980..23037Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig1102 22981..23037 -
1696949479.0499623-CDS-S-firma_F_contig1102:22980..230371696949479.0499623-CDS-S-firma_F_contig1102:22980..23037Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig1102 22981..23037 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815650.5203664-UTR-S-firma_F_contig1102:23037..231551622815650.5203664-UTR-S-firma_F_contig1102:23037..23155Sphaerotrichia firma ET2_F femaleUTRS-firma_F_contig1102 23038..23155 -
1696949479.0582192-UTR-S-firma_F_contig1102:23037..231551696949479.0582192-UTR-S-firma_F_contig1102:23037..23155Sphaerotrichia firma ET2_F femaleUTRS-firma_F_contig1102 23038..23155 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_F_contig1102.1370.1prot_S-firma_F_contig1102.1370.1Sphaerotrichia firma ET2_F femalepolypeptideS-firma_F_contig1102 20454..23037 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-firma_F_contig1102.1370.1

>prot_S-firma_F_contig1102.1370.1 ID=prot_S-firma_F_contig1102.1370.1|Name=mRNA_S-firma_F_contig1102.1370.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=439bp
MERIINGEQEPQSWAQSIQAYQRGKKELPWNPAEVPPPTYVKQFEVSRRS
RDMDPILMRHRNPDVEAKRKRREEERLRIALNNAKSRQLRVEQNYDIVTH
SSFLTETQASHCSDPPARPARHPDTKTSYDILNHVPREKAHSVALIYPDG
EGPEVMPQKVVTVEGGKKPHSHKKRDVDVLSNRFLEKHEERMVEEKRFLR
EAAEEKYRRTHDYNIIAGAYYDQNKERNFVKSREQLGTMQGRAQQYRLPP
SIRYGEGNGYNIINQQPKKTVVKNDSSVADRGLSKRSRGRQVHEENIRQH
ERAAAISEQRTLNRPSHQRYVEVLRTGHNVISNRVFTGREGKPPPQPRAK
PPVPVWDRLSRQPGQPEAVAAASRPTREQEGNQREKVGSTAATTAPGSGG
RDLKERGGNGDSSRRSRCAGEDNGDRGDEQGRSRRQLPP
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mRNA from alignment at S-firma_F_contig1102:20454..23155-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-firma_F_contig1102.1370.1 ID=mRNA_S-firma_F_contig1102.1370.1|Name=mRNA_S-firma_F_contig1102.1370.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=2702bp|location=Sequence derived from alignment at S-firma_F_contig1102:20454..23155- (Sphaerotrichia firma ET2_F female)
AGATCACACTTTTTTATTTCTTCCAACGAGGAGAGAGAGTCGTTGCGCGC GAGCATCCCCGGCAACCTGTGTTCCTCGCTCATTTTTCCCATCATTCCTC AAAGCTTCGTAAACAACAATGGAAAGGATTATCAATGGCGAGCAAGAGCC GCAGAGCTGGGCGCAATCAATTCAGGTGCGCGACTCCTCCTTGCGTCCTC AACTTCATCATTGAGCAACAAACTTGTTAGCCAGCATACACATATTTCTA CCGCAGGGCTTGTGTCGTACAACATGATTGTGCAACCTACGTATCGCCCA CTCAATATTGACGCCCGCGGACTGGATCAACCAGGCGTATCAACGAGGCA AGAAGGAGCTGCCATGGAACCCTGCAGAAGTTCCGCCGCCAACTTACGTC AAGCAATTCGAGGTTTCGCGAAGAAGCAGGGACATGGACCCTATTCTCAT GCGGCATAGGTGAGAGTCTACAATAGTGTGCGGTAGTGAACTCATACCTT TAGTCTCTGTATTGAACGTTCTGGAAAAGCGCCTACTTGCATCTATGTTG CTCTGGCGGCAAGGCGTTGCACACGTTCGTACATGTTTATCCTCCGCACA CGCCCGCTTTAGCATATCAATACTAGCTCCTCTCTCCTCAATCTTAGTGC TGCTCGCTGTTCTCATGTTTCATTGATCTTACAGGAATCCAGATGTCGAG GCAAAGAGGAAGCGGCGCGAGGAGGAGCGCTTGCGAATCGCTCTGAACAA CGCCAAAAGCCGGCAGCTGAGAGTCGAACAAAACTACGATATTGTGACCC ACTCTTCGTTCCTGACAGAAACGCAGGCGAGCCACTGCAGTGTAGCAATT TTACGTCACAGACATCTAGACTGCGACGAATGCATAGATGAGACCGGTAC AGCAATTCAGGGCAGAGGTGGTATTTCGTTTTTTTAGTACTTGACAGTCT CGTGCATCGTTGCCCAAGTGAATGTGTTGTGTCTCAAGGTGCCCAGCCTC TCCAATGCTGGTATTATTGCACTTTTAGGTATAGACTAGGATGCAAGCAA GATAATCCCAGCGTTCAACTCGACATCCCTCTGGGCAAATCAATGTCCGA ATGCGTCTAAACCCGACAATTCGAATCTTCAAAACAGGACCCTCCCGCAA GACCTGCTCGGCATCCTGACACGAAGACTTCTTACGACATCCTCAACCAC GTGCCGAGGGAGAAGGCTCATTCGGTGGCATTGATATACCCGGACGGTGA GGGGCCGGAGGTGATGCCCCAGAAAGTGGTGACTGTGGAAGGGGGCAAGA AACCCCACAGCCACAAGAAACGAGATGTGGACGTCTTGAGCAACAGGTGA GGTTGTGTGTAGACTATGGCTCTGCAAGCACCCTATTTAGACATGTGTGA TGAGGGGCGGCCGTTGAAAACCTATTGCCGACGAGCAAGGGCTGGTAGAA AAACTGCGTGGAAAGCGGGCGGGGAAAGAAGGGCCAACTGTGCCGGCAGG GGTTTCCGGTGAAGTATGGCCTGCGCATACGTTTTACACCTATGTAAGGC AAGCTTGCTCCCGCCCCACCCGTTGATTCCCGTCCGCGCGACACCAGGTT CTTGGAGAAGCACGAAGAGCGCATGGTCGAAGAGAAGCGGTTCCTGCGAG AGGCGGCCGAGGAAAAATACCGCCGTACACACGACTACAACATTATTGCG GGGGCGTACTACGACCAGAACAAGGAGCGGAATTTCGTCAAGTCCAGGGA ACAACTCGGGACGATGCAAGGGCGAGCGCAGCAGTACCGCTTGCCGCCGA GCATACGGTACGGTGAAGGAAATGGTTATAATATCATCAACCAGCAGGTA TGAACAAGGGCTCGAAAGTCTTTGTTACGAGCTCGGATACCGACAGTCTA AGTTTGTGGCTGAGAATACGAATAGAGAGGAAGTGATGAAGCAAGTGACG ACAACACCCATGCCTCCCTCCGATCGAAGCCCTAAATATCCCTTTGCAGG GAAAAACCTCTTTCTGAAATACCGCTCCGAGCACAATAGACCAAAAATGT TTTTTTCTCTACGCTGCGCCGCTGGTGTCGCTGGCGTCATTCTTCCTACA CCAACGAAGCGCTCTCCCGTCCTTTGTGTCCATACCACACCGTCACTCAC GACGCGGAACAATTCCCGGGTGGACAACAACAGCCGAAGAAAACGGTCGT CAAAAACGACTCTTCCGTGGCGGATCGCGGCCTCTCCAAGCGCTCGCGGG GCCGCCAGGTGCACGAGGAAAACATCCGCCAGCACGAACGCGCCGCCGCC ATCAGCGAGCAGCGGACCCTCAACCGCCCATCCCACCAGCGGTACGTCGA AGTGCTCCGGACCGGGCACAACGTCATCTCCAACCGAGTCTTCACGGGGC GGGAGGGCAAGCCGCCCCCGCAGCCTCGCGCGAAACCGCCGGTGCCTGTC TGGGACAGGCTTTCGAGACAGCCGGGGCAGCCGGAGGCGGTCGCGGCAGC GTCGAGGCCGACACGCGAACAGGAGGGGAATCAACGAGAAAAAGTCGGTA GCACTGCCGCAACGACGGCCCCTGGTAGCGGTGGACGAGATTTGAAAGAG CGGGGTGGCAATGGCGACAGTAGCAGGCGTAGCAGATGCGCGGGGGAGGA CAACGGGGATCGCGGCGACGAGCAGGGACGGAGTCGTCGCCAGCTGCCAC CG
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Coding sequence (CDS) from alignment at S-firma_F_contig1102:20454..23155-

>mRNA_S-firma_F_contig1102.1370.1 ID=mRNA_S-firma_F_contig1102.1370.1|Name=mRNA_S-firma_F_contig1102.1370.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=2634bp|location=Sequence derived from alignment at S-firma_F_contig1102:20454..23155- (Sphaerotrichia firma ET2_F female)
ATGGAAAGGATTATCAATGGCGAGCAAGAGCCGCAGAGCTGGGCGCAATC
AATTCAGATGGAAAGGATTATCAATGGCGAGCAAGAGCCGCAGAGCTGGG
CGCAATCAATTCAGGCGTATCAACGAGGCAAGAAGGAGCTGCCATGGAAC
CCTGCAGAAGTTCCGCCGCCAACTTACGTCAAGCAATTCGAGGTTTCGCG
AAGAAGCAGGGACATGGACCCTATTCTCATGCGGCATAGGCGTATCAACG
AGGCAAGAAGGAGCTGCCATGGAACCCTGCAGAAGTTCCGCCGCCAACTT
ACGTCAAGCAATTCGAGGTTTCGCGAAGAAGCAGGGACATGGACCCTATT
CTCATGCGGCATAGGAATCCAGATGTCGAGGCAAAGAGGAAGCGGCGCGA
GGAGGAGCGCTTGCGAATCGCTCTGAACAACGCCAAAAGCCGGCAGCTGA
GAGTCGAACAAAACTACGATATTGTGACCCACTCTTCGTTCCTGACAGAA
ACGCAGGCGAGCCACTGCAGTGAATCCAGATGTCGAGGCAAAGAGGAAGC
GGCGCGAGGAGGAGCGCTTGCGAATCGCTCTGAACAACGCCAAAAGCCGG
CAGCTGAGAGTCGAACAAAACTACGATATTGTGACCCACTCTTCGTTCCT
GACAGAAACGCAGGCGAGCCACTGCAGTGACCCTCCCGCAAGACCTGCTC
GGCATCCTGACACGAAGACTTCTTACGACATCCTCAACCACGTGCCGAGG
GAGAAGGCTCATTCGGTGGCATTGATATACCCGGACGGTGAGGGGCCGGA
GGTGATGCCCCAGAAAGTGGTGACTGTGGAAGGGGGCAAGAAACCCCACA
GCCACAAGAAACGAGATGTGGACGTCTTGAGCAACAGGACCCTCCCGCAA
GACCTGCTCGGCATCCTGACACGAAGACTTCTTACGACATCCTCAACCAC
GTGCCGAGGGAGAAGGCTCATTCGGTGGCATTGATATACCCGGACGGTGA
GGGGCCGGAGGTGATGCCCCAGAAAGTGGTGACTGTGGAAGGGGGCAAGA
AACCCCACAGCCACAAGAAACGAGATGTGGACGTCTTGAGCAACAGGTTC
TTGGAGAAGCACGAAGAGCGCATGGTCGAAGAGAAGCGGTTCCTGCGAGA
GGCGGCCGAGGAAAAATACCGCCGTACACACGACTACAACATTATTGCGG
GGGCGTACTACGACCAGAACAAGGAGCGGAATTTCGTCAAGTCCAGGGAA
CAACTCGGGACGATGCAAGGGCGAGCGCAGCAGTACCGCTTGCCGCCGAG
CATACGGTACGGTGAAGGAAATGGTTATAATATCATCAACCAGCAGGTTC
TTGGAGAAGCACGAAGAGCGCATGGTCGAAGAGAAGCGGTTCCTGCGAGA
GGCGGCCGAGGAAAAATACCGCCGTACACACGACTACAACATTATTGCGG
GGGCGTACTACGACCAGAACAAGGAGCGGAATTTCGTCAAGTCCAGGGAA
CAACTCGGGACGATGCAAGGGCGAGCGCAGCAGTACCGCTTGCCGCCGAG
CATACGGTACGGTGAAGGAAATGGTTATAATATCATCAACCAGCAGCCGA
AGAAAACGGTCGTCAAAAACGACTCTTCCGTGGCGGATCGCGGCCTCTCC
AAGCGCTCGCGGGGCCGCCAGGTGCACGAGGAAAACATCCGCCAGCACGA
ACGCGCCGCCGCCATCAGCGAGCAGCGGACCCTCAACCGCCCATCCCACC
AGCGGTACGTCGAAGTGCTCCGGACCGGGCACAACGTCATCTCCAACCGA
GTCTTCACGGGGCGGGAGGGCAAGCCGCCCCCGCAGCCTCGCGCGAAACC
GCCGGTGCCTGTCTGGGACAGGCTTTCGAGACAGCCGGGGCAGCCGGAGG
CGGTCGCGGCAGCGTCGAGGCCGACACGCGAACAGGAGGGGAATCAACGA
GAAAAAGTCGGTAGCACTGCCGCAACGACGGCCCCTGGTAGCGGTGGACG
AGATTTGAAAGAGCGGGGTGGCAATGGCGACAGTAGCAGGCGTAGCAGAT
GCGCGGGGGAGGACAACGGGGATCGCGGCGACGAGCAGGGACGGAGTCGT
CGCCAGCTGCCACCGCCGAAGAAAACGGTCGTCAAAAACGACTCTTCCGT
GGCGGATCGCGGCCTCTCCAAGCGCTCGCGGGGCCGCCAGGTGCACGAGG
AAAACATCCGCCAGCACGAACGCGCCGCCGCCATCAGCGAGCAGCGGACC
CTCAACCGCCCATCCCACCAGCGGTACGTCGAAGTGCTCCGGACCGGGCA
CAACGTCATCTCCAACCGAGTCTTCACGGGGCGGGAGGGCAAGCCGCCCC
CGCAGCCTCGCGCGAAACCGCCGGTGCCTGTCTGGGACAGGCTTTCGAGA
CAGCCGGGGCAGCCGGAGGCGGTCGCGGCAGCGTCGAGGCCGACACGCGA
ACAGGAGGGGAATCAACGAGAAAAAGTCGGTAGCACTGCCGCAACGACGG
CCCCTGGTAGCGGTGGACGAGATTTGAAAGAGCGGGGTGGCAATGGCGAC
AGTAGCAGGCGTAGCAGATGCGCGGGGGAGGACAACGGGGATCGCGGCGA
CGAGCAGGGACGGAGTCGTCGCCAGCTGCCACCG
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