mRNA_S-firma_F_contig1102.1367.1 (mRNA) Sphaerotrichia firma ET2_F female
|
Overview
Homology
BLAST of mRNA_S-firma_F_contig1102.1367.1 vs. uniprot
Match: D8LS82_ECTSI (AB hydrolase-1 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LS82_ECTSI) HSP 1 Score: 526 bits (1356), Expect = 1.920e-182 Identity = 240/267 (89.89%), Postives = 253/267 (94.76%), Query Frame = 2
Query: 107 YDTIPDENPGLRTFIDGKEDGPVIVFVHGWPDDHALWDKQVAHLKDRFRCVTTDLPGFSGDDAHVEKWGYSTEEVVKRIESTVERVGDGKPIILVAHDFGCMYSFKFEAKRPDLVRKFVAIDVGGAMKPSVCGAMLMVTYQLWLCLAFVLGRPIGDGIARSFAWLLGSPSGGRIARASTCYPYYHTWKHVLCSGEKVRPMMPQCPLMFLHGTAGVKKIMTFHAARWAEKVQEREGSSSQGIPRASHWVTRDQPDEVNRKLDEFLADM 907
Y+ I D+ PGLRTF GKEDGPVI+FVHGWPDDH LWD QV HLKDRFRCVTTDLPGFSGDDA VEKWGYSTEEVVKRIE T ERVG+G+PIILVAHDFGCMYSFKFEAKRPDLVRK VAIDVGGAMKPS+CGAMLMVTYQLWLC AF+LGRPIGDGIARSFAWL+GSPSG RIARASTCYPYYHTWKH+LCSGEKVRPMMPQCPLMFLHGTAGVKKIMTFHAARWAEKVQE+EGSSSQGIP+ASHWVTRDQP+EVNR+LDEFLADM
Sbjct: 5 YNAIVDDQPGLRTFASGKEDGPVILFVHGWPDDHLLWDAQVTHLKDRFRCVTTDLPGFSGDDARVEKWGYSTEEVVKRIERTAERVGNGQPIILVAHDFGCMYSFKFEAKRPDLVRKMVAIDVGGAMKPSICGAMLMVTYQLWLCAAFLLGRPIGDGIARSFAWLMGSPSGARIARASTCYPYYHTWKHILCSGEKVRPMMPQCPLMFLHGTAGVKKIMTFHAARWAEKVQEKEGSSSQGIPQASHWVTRDQPEEVNRRLDEFLADM 271
BLAST of mRNA_S-firma_F_contig1102.1367.1 vs. uniprot
Match: D8LS83_ECTSI (Putative hydrolase of the alpha/beta fold superfamily n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS83_ECTSI) HSP 1 Score: 341 bits (874), Expect = 3.510e-109 Identity = 155/277 (55.96%), Postives = 205/277 (74.01%), Query Frame = 2
Query: 83 RNMSAPITYDTIPDENPGLRTFIDGKEDGPVIVFVHGWPDDHALWDKQVAHLKDRFRCVTTDLPGFSGD----DAHVEKWGYSTEEVVKRIESTVERVGDGKPIILVAHDFGCMYSFKFEAKRPDLVRKFVAIDVGGAMKPSVCGAMLMVTYQLWLCLAFVLGRPIGDGIARSFAWLLGSPSGGRIARASTCYPYYHTWKHVLCSGE-KVRPMMPQCPLMFLHGTAGVKKIMTFHAARWAEKVQEREGSSSQGIPRASHWVTRDQPDEVNRKLDEFL 898
R M A + T P LR F DGK+DGPV++FVHGWPDDH +WDKQVAHLKDR+RCVTTDLPGF D DA VEK GYS +E+V+R+E T+E+ G+G+P+ L+AHD+GC +SF E RP+LV++ VAIDVGGA++P + +++++Y LWL AF +G PIGD +ARSFA L+G+P+G R+A A +CYPYYH WK L + + +MP PL+F +GTAG K++M FHA WA+KV ++EGS S + R+ HWVT DQPD++NRKLD FL
Sbjct: 30 RGMIAARSRSTAASTTPALRMFSDGKDDGPVLLFVHGWPDDHQMWDKQVAHLKDRYRCVTTDLPGFGADSDEYDADVEKNGYSIDEIVRRLERTIEKAGNGEPVTLIAHDWGCTFSFLVEKNRPELVKRMVAIDVGGAVEPGLGSLIIIMSYHLWLIAAFRVGGPIGDVMARSFARLVGAPAGARVATARSCYPYYHYWKRKLDKSQGPMGNLMPGAPLLFAYGTAGYKRVMPFHADWWAKKVNDKEGSLSVAMTRSKHWVTVDQPDDLNRKLDAFL 306
BLAST of mRNA_S-firma_F_contig1102.1367.1 vs. uniprot
Match: D8LK39_ECTSI (Short chain dehydrogenase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK39_ECTSI) HSP 1 Score: 308 bits (790), Expect = 3.290e-97 Identity = 143/265 (53.96%), Postives = 188/265 (70.94%), Query Frame = 2
Query: 137 LRTFIDGKEDGPVIVFVHGWPDDHALWDKQVAHLKDRFRCVTTDLPGFSGDD------AHVEKWGYSTEEVVKRIESTVERVGDGKPIILVAHDFGCMYSFKFEAKRPDLVRKFVAIDVGGAMK--PSVCGAMLMVTYQLWLCLAFVLGRPIGDGIARSFAWLLGSPSGGRIARASTCYPYYHTWKHVLCSGEKVRPMMPQCPLMFLHGTAGVKKIMTFHAARWAEKVQEREGSSSQGIPRASHWVTRDQP-DEVNRKLDEFLAD 904
LR+F +G E GP +VFVHGWPDDH LWD QVAHLKDR+RCVTTDLPGFSGD+ A KWGYS EEV KR+E T+E VG GKP+ +VAHD+GC Y+F E RPDLV+K VA+DVGG + PS+ + + YQ +L +AF++G IGD +AR FA L G+P+ +ARAS CYPY H WK + + + P MP+CP++F++G+AG+KK+M FHA W +K+ +R+GSS + ASHW+ R + D VN +LD F A+
Sbjct: 6 LRSFAEGNESGPTVVFVHGWPDDHTLWDAQVAHLKDRYRCVTTDLPGFSGDEDGDGGTASSSKWGYSFEEVAKRLERTIEDVGKGKPVFVVAHDWGCFYAFMLEKNRPDLVKKLVALDVGGGLSFWPSL-SLLSIALYQTYLMVAFLIGGRIGDAMARGFARLAGAPAASTVARASVCYPYIHFWKSQIQTCLGMGPFMPRCPVLFMYGSAGMKKLMRFHADWWVDKISKRKGSSVVEVTEASHWLMRGRGGDVVNARLDTFFAE 269
BLAST of mRNA_S-firma_F_contig1102.1367.1 vs. uniprot
Match: A0A4R6QMA9_9BURK (Pimeloyl-ACP methyl ester carboxylesterase n=1 Tax=Paucibacter toxinivorans TaxID=270368 RepID=A0A4R6QMA9_9BURK) HSP 1 Score: 183 bits (465), Expect = 1.850e-49 Identity = 92/262 (35.11%), Postives = 144/262 (54.96%), Query Frame = 2
Query: 134 GLRTFIDGKEDGPVIVFVHGWPDDHALWDKQVAHLKDRFRCVTTDLPGFSGDDAHVEKWGYSTEEVVKRIESTVERVGDGKPIILVAHDFGCMYSFKFEAKRPDLVRKFVAIDVGGAMKPSVCGAM------LMVTYQLWLCLAFVLGRPIGDGIARSFAWLLGSPSGGRIARASTCYPYYHTWKHVLCSGEKVRPMMPQCPLMFLHGTAGVKKIMTFHAARWAEKVQEREGSSSQGIPRASHWVTRDQPDEVNRKLDEFLA 901
G+ F++G+ + +V +HGWPD + LWD QVAHL+ RCV LPGF DA + EE++ + +E+V G+P++L+ HD+GC++ ++ + P+LV + +A+D+G A P+ A+ +++ YQLWL LA+ +G +G + R A + PS + A YPY TW K RP+ P CP+++L+GT +K FH+ WAE + R GS QG + HWV QP N + +L
Sbjct: 9 GVDVFVEGQGED-ALVMIHGWPDTYRLWDAQVAHLRASHRCVRFTLPGF---DAAQPRRACGLEEMIALFKRIIEQVSPGRPVVLMLHDWGCVFGYQLLMRHPELVARVIAVDIGDAGSPAHVRALGAKAKLMVLGYQLWLALAWRIGGRLGTWMTRYMAGAMQCPSDPQYIHADMNYPYDITWTGSHGGYRKARPIDPPCPMLYLYGT---RKPFMFHSQAWAEALAARPGSRVQGF-KTGHWVMSAQPQAFNEAVSAWLV 262
BLAST of mRNA_S-firma_F_contig1102.1367.1 vs. uniprot
Match: Q9RZM6_DEIRA (AB hydrolase-1 domain-containing protein n=2 Tax=Deinococcus radiodurans TaxID=1299 RepID=Q9RZM6_DEIRA) HSP 1 Score: 174 bits (441), Expect = 1.490e-45 Identity = 97/294 (32.99%), Postives = 147/294 (50.00%), Query Frame = 2
Query: 68 PVHRLRNMSA-PITYDTIPDENP-----------GLRTFIDGKEDGP-VIVFVHGWPDDHALWDKQVAHLKDRFRCVTTDLPGFSGDDAHVEKWGYSTEEVVKRIESTVERVGDGKPIILVAHDFGCMYSFKFEAKRPDLVRKFVAIDVGGAMKPSVCGAMLMVTYQLWLCLAFVLGRPIGDGIARSFAWLLGSPSGGRIARASTCYPYYHTW---KHVLCSGEKVRPMMPQCPLMFLHGTAGVKKIMTFHAARWAEKVQEREGSSSQGIPRASHWVTRDQPDEVNRKLDEFLA 901
P R+R +A P P E P +I+G GP I+ VHGWPD + LWD QV LK R+RCV LPGF +A Y+ +E+ + VE++ +P+IL+ HD+GCM+ ++F + P V K + +DVG + + + YQ WL LA+ +G +G+ + R L+ P R A YPY+ W K + + P CP++F++G +K + FH RW +KV+ G G+P HWV QPD +NR++ ++LA
Sbjct: 35 PPRRIRTPAAGPFKLPRGPQEKPMRQEHQQICVDDTTLYIEGS--GPETILMVHGWPDTYRLWDAQVEALKGRYRCVRLTLPGFEEPNARKV---YTLDELTGLLSRVVEQISPDRPVILLLHDWGCMFGYQFARRFPQRVSKIIGVDVGDRFEQTPKALAFTIAYQWWLALAWWIGGGLGNLMTRVLMRLMHVPKKTREVTAGMNYPYFQMWFGGKEAY--SRQAKSFSPSCPVLFVYGE---RKPVMFHTPRWVQKVERLPGGKVVGLP-TGHWVMVQQPDRLNREILDWLA 317
BLAST of mRNA_S-firma_F_contig1102.1367.1 vs. uniprot
Match: UPI001669EC1E (alpha/beta hydrolase n=1 Tax=Undibacterium terreum TaxID=1224302 RepID=UPI001669EC1E) HSP 1 Score: 172 bits (436), Expect = 2.420e-45 Identity = 87/260 (33.46%), Postives = 141/260 (54.23%), Query Frame = 2
Query: 134 GLRTFIDGKEDGPVIVFVHGWPDDHALWDKQVAHLKDRFRCVTTDLPGFSGDDAHVEKWGYSTEEVVKRIESTVERVGDGKPIILVAHDFGCMYSFKFEAKRPDLVRKFVAIDVGGA----MKPSVCGAMLMVTYQLWLCLAFVLGRPIGDGIARSFAWLLGSPSGGRIARASTCYPYYHTWKHVLCSGEKVRPMMPQCPLMFLHGTAGVKKIMTFHAARWAEKVQEREGSSSQGIPRASHWVTRDQPDEVNRKLDEFLA 901
G+ +++G+ IV +HGWPD H LWD+QVA L+DR+RCV LPGF DA + YS EE ++ +++V G +IL+ HD+GC++ ++F + P +V + V +D+G +P++ +++V+YQLWL A+ LG IGD + R A + + R + CYPY W + + P CP+++++G K FH+ W ++ E GS GI + HWV ++QP N + +L
Sbjct: 23 GIDVYMEGRG-RETIVMIHGWPDTHRLWDEQVAALRDRYRCVRFTLPGF---DAGKPRRAYSLEETMEIFRRIIDKVCHGHKVILMLHDWGCVFGYQFYMRHPSMVSRIVGVDIGDVDSPDYQPTLKARLMIVSYQLWLAAAWRLGGRIGDAMTRGMARAARAYARPRDIGSRMCYPYDIFWTGSHGGYKNTQLFKPACPMLYIYGK---HKPFMFHSPAWLLELAEHPGSEVLGID-SGHWVMKEQPHAFNEAVAYWLT 274
BLAST of mRNA_S-firma_F_contig1102.1367.1 vs. uniprot
Match: UPI0004CFF67F (alpha/beta hydrolase n=2 Tax=Burkholderiaceae TaxID=119060 RepID=UPI0004CFF67F) HSP 1 Score: 170 bits (431), Expect = 8.560e-45 Identity = 87/264 (32.95%), Postives = 141/264 (53.41%), Query Frame = 2
Query: 134 GLRTFIDGKEDGPVIVFVHGWPDDHALWDKQVAHLKDRFRCVTTDLPGFSGDDAHVEKWGYSTEEVVKRIESTVERVGDGKPIILVAHDFGCMYSFKFEAKRPDLVRKFVAIDVGGAMKPS--------VCGAMLMVTYQLWLCLAFVLGRPIGDGIARSFAWLLGSPSGGRIARASTCYPYYHTWKHVLCSGEKVRPMMPQCPLMFLHGTAGVKKIMTFHAARWAEKVQEREGSSSQGIPRASHWVTRDQPDEVNRKLDEFLA 901
G+ ++G E IV +HGWPD + LWD+QV + +RCV LPGF D + +S ++ + VE+ G+ IIL+ HD+GC++ ++F K P LV K + +D+G A PS V ++V YQ+WL +A+ +G +GD + S A L +P+ + +S YPYY W V S + ++P+CP++F++G+ ++ FH+ +WAE + REG HWV R++P N + +L
Sbjct: 9 GIDVLVEG-EGSQTIVMIHGWPDTYRLWDEQVEFFRAHYRCVRFTLPGF---DIDKPRQAFSLAHLIGTFKQVVEKTCPGEKIILMLHDWGCVFGYQFYMKHPSLVSKIIGVDIGDA--PSRRYVKSLPVKAKAMIVRYQVWLAIAWRIGGRLGDRMTTSMAHWLRAPADPQFICSSMNYPYYIQWTGVHGSYRHLAEVVPRCPMLFIYGS---RRPFIFHSPQWAEDLAAREGCQVLAFD-TGHWVMREEPQRFNATVQVWLT 262
BLAST of mRNA_S-firma_F_contig1102.1367.1 vs. uniprot
Match: A0A4U1BTJ1_9GAMM (Alpha/beta hydrolase n=1 Tax=Ferrimonas aestuarii TaxID=2569539 RepID=A0A4U1BTJ1_9GAMM) HSP 1 Score: 167 bits (422), Expect = 1.640e-43 Identity = 83/261 (31.80%), Postives = 143/261 (54.79%), Query Frame = 2
Query: 137 LRTFIDGKEDGPVIVFVHGWPDDHALWDKQVAHLKDRFRCVTTDLPGFSGDDAHVEKWGYSTEEVVKRIESTVERVGDGKPIILVAHDFGCMYSFKFEAKRPDLVRKFVAIDVGGAMKP----SVCGAMLMVTYQLWLCLAFVLGRPIGDGIARSFAWLLGSPSGGRIARASTCYPYYHTWKHVLCSGEKVR--PMMPQCPLMFLHGTAGVKKIMTFHAARWAEKVQEREGSSSQGIPRASHWVTRDQPDEVNRKLDEFLA 901
+ ++G D +V +HGWPD+H LWD QV LK FRC LPG+ D HV K + +++V +I V+ V KP+ L+ HD+G ++ +++ + D V++ V++D+G A S + + YQ+WL A+ +G +GD + R A ++ +P + Y Y+ W H +G+ + P+ +CPL+F++G K +FH+ W +++ E G+ +G+P HWV RD+P++ NR + E+L
Sbjct: 10 MEVHLEGSGD-ETVVMIHGWPDNHTLWDPQVEMLKGHFRCARFTLPGY--DPNHVRKL-HDVDDLVLQISRVVDAVSPDKPVTLLIHDWGSVWGYQYYLRNQDRVKRIVSVDIGDAGSKHHELSTKAKLFIFGYQMWLATAWKIGGNLGDRMTRYMAGVVKAPGAPETIHSGMTYSYFWKW-HSTFTGKPLNMLPLKVECPLLFIYGA---DKKASFHSEHWQQQMAEIPGNRVEGLP-TGHWVMRDEPEQFNRIVFEWLT 261
BLAST of mRNA_S-firma_F_contig1102.1367.1 vs. uniprot
Match: A0A1B8Q8T3_9GAMM (AB hydrolase-1 domain-containing protein n=3 Tax=Moraxella atlantae TaxID=34059 RepID=A0A1B8Q8T3_9GAMM) HSP 1 Score: 167 bits (422), Expect = 1.830e-43 Identity = 87/261 (33.33%), Postives = 136/261 (52.11%), Query Frame = 2
Query: 134 GLRTFIDGKEDGPVIVFVHGWPDDHALWDKQVAHLKDRFRCVTTDLPGFSGDDAHVEKWGYSTEEVVKRIESTVERVGDGKPIILVAHDFGCMYSFKFEAKRPDLVRKFVAIDVGGAMKPS------VCGAMLMVTYQLWLCLAFVLGRPIGDGIARSFAWLLGSPSGGRIARASTCYPYYHTWKHVLCSGEKVRPMMPQCPLMFLHGTAGVKKIMTFHAARWAEKVQEREGSSSQGIPRASHWVTRDQPDEVNRKLDEFL 898
G+ I+G + +V +HGWPD ALW +QVA KD +RCVT LP F DA +S +EV+ I ++ V +P+IL+ HD+GCMY +++ + P V + + +DVG A + + +++ YQL L AF + IGD IA + +LG+P+ R A+ YPYY W + ++P+ CP +F + T +K FH+ W V + + G + SHWVT D+P+ N + +L
Sbjct: 9 GVNGSIEGDGE-QTLVMIHGWPDTKALWQQQVAFFKDHYRCVTFTLPAFDQPDARPRV--FSLQEVIDTIRQVIDHVSPERPVILMTHDWGCMYGYQYTLRHPKRVSRLIGVDVGDAYSAAFNQSLTLKDKLVIAGYQLPLVAAFRINGRIGDSIAETVGKVLGAPAPARSIHANMGYPYYSAWTKAKGGFKNLKPLDFACPFLFAYAT---QKPTMFHSEAWLINVAKNPDNQVSGF-KTSHWVTVDEPELFNYTVLSWL 262
BLAST of mRNA_S-firma_F_contig1102.1367.1 vs. uniprot
Match: A8FVT6_SHESH (AB hydrolase-1 domain-containing protein n=3 Tax=Shewanella TaxID=22 RepID=A8FVT6_SHESH) HSP 1 Score: 166 bits (421), Expect = 2.210e-43 Identity = 90/261 (34.48%), Postives = 141/261 (54.02%), Query Frame = 2
Query: 137 LRTFIDGKEDGPVIVFVHGWPDDHALWDKQVAHLKDRFRCVTTDLPGFSGDDAHVEKWGYSTEEVVKRIESTVERVGDGKPIILVAHDFGCMYSFKFEAKRPDLVRKFVAIDVGGA-MKPSVCGAML---MVTYQLWLCLAFVLGRPIGDGIARSFAWLLGSPSGGRIARASTCYPYYHTWKHVLCSGEKVR--PMMPQCPLMFLHGTAGVKKIMTFHAARWAEKVQEREGSSSQGIPRASHWVTRDQPDEVNRKLDEFLA 901
+ +++G D IV VHGWPD + +WDKQV LKDR+RCV LPG+ D + Y +E+V+ I + V+ VG+GKP+ L+ HD+GC + ++F + V + + +D+G A K V A + M YQ+WL A+ +G +GD + R A LL +P +S Y YY W HVL +G + P+ CPL+F++G K FH+ W EK+ + + + + HWV + P+ N + ++L
Sbjct: 10 VDVYVEGMGD-ETIVMVHGWPDTYRVWDKQVEVLKDRYRCVRFTLPGY---DKSKPRRAYDLKEIVQLINTIVDTVGNGKPVTLMLHDWGCFFGYQFYMNYREKVTRIIGVDIGDAGSKEHVLSAKVKAFMFGYQMWLAAAWKIGGKLGDAMTRKMAKLLHAPGEPGSITSSMTYSYYWKWSHVL-TGRSLDHLPLEITCPLLFMYGE---NKPGMFHSTPWVEKIASDKRNRVEPF-QTRHWVMIEAPERFNNIMLDWLG 261 The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig1102.1367.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-firma_F_contig1102.1367.1 >prot_S-firma_F_contig1102.1367.1 ID=prot_S-firma_F_contig1102.1367.1|Name=mRNA_S-firma_F_contig1102.1367.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=275bp MSAPITYDTIPDENPGLRTFIDGKEDGPVIVFVHGWPDDHALWDKQVAHLback to top mRNA from alignment at S-firma_F_contig1102:11012..14681- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-firma_F_contig1102.1367.1 ID=mRNA_S-firma_F_contig1102.1367.1|Name=mRNA_S-firma_F_contig1102.1367.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=3670bp|location=Sequence derived from alignment at S-firma_F_contig1102:11012..14681- (Sphaerotrichia firma ET2_F female)back to top Coding sequence (CDS) from alignment at S-firma_F_contig1102:11012..14681- >mRNA_S-firma_F_contig1102.1367.1 ID=mRNA_S-firma_F_contig1102.1367.1|Name=mRNA_S-firma_F_contig1102.1367.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=1650bp|location=Sequence derived from alignment at S-firma_F_contig1102:11012..14681- (Sphaerotrichia firma ET2_F female)back to top |