mRNA_S-firma_F_contig1102.1366.1 (mRNA) Sphaerotrichia firma ET2_F female
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Overview
Homology
BLAST of mRNA_S-firma_F_contig1102.1366.1 vs. uniprot
Match: D8LS83_ECTSI (Putative hydrolase of the alpha/beta fold superfamily n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS83_ECTSI) HSP 1 Score: 433 bits (1113), Expect = 1.260e-141 Identity = 199/277 (71.84%), Postives = 228/277 (82.31%), Query Frame = 1
Query: 592 LQVREESTISSTRPGLRTFLDGKKDGPTIVFVHGWPDDHSMWDKQVAHLKDRYRCITTDLPGFGMDGDDRDVKAEKLGYSIDEIVERLETTIEEVGNGSPVTIIAHDWGCTYSFLVEKRRPELVKKMVAIDVGGAVEPSLAGLVAIVSYHMWLIAAFRVGGAVGNAMARAFAWLVGAPDAARVATATSCYPYYHWWKRRLDKSQVQIKALVPEAPVLFLYGTAGYKSYLMFHADWWAKTIDAREGSFSVPMTGSKHWVTRDQPDDLNRRIDAFLDKE 1422
+ R ST +ST P LR F DGK DGP ++FVHGWPDDH MWDKQVAHLKDRYRC+TTDLPGFG D D+ D EK GYSIDEIV RLE TIE+ GNG PVT+IAHDWGCT+SFLVEK RPELVK+MVAIDVGGAVEP L L+ I+SYH+WLIAAFRVGG +G+ MAR+FA LVGAP ARVATA SCYPYYH+WKR+LDKSQ + L+P AP+LF YGTAGYK + FHADWWAK ++ +EGS SV MT SKHWVT DQPDDLNR++DAFL+K+
Sbjct: 33 IAARSRSTAASTTPALRMFSDGKDDGPVLLFVHGWPDDHQMWDKQVAHLKDRYRCVTTDLPGFGADSDEYDADVEKNGYSIDEIVRRLERTIEKAGNGEPVTLIAHDWGCTFSFLVEKNRPELVKRMVAIDVGGAVEPGLGSLIIIMSYHLWLIAAFRVGGPIGDVMARSFARLVGAPAGARVATARSCYPYYHYWKRKLDKSQGPMGNLMPGAPLLFAYGTAGYKRVMPFHADWWAKKVNDKEGSLSVAMTRSKHWVTVDQPDDLNRKLDAFLEKK 309
BLAST of mRNA_S-firma_F_contig1102.1366.1 vs. uniprot
Match: D8LS82_ECTSI (AB hydrolase-1 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LS82_ECTSI) HSP 1 Score: 335 bits (858), Expect = 1.870e-104 Identity = 146/268 (54.48%), Postives = 202/268 (75.37%), Query Frame = 1
Query: 610 STISSTRPGLRTFLDGKKDGPTIVFVHGWPDDHSMWDKQVAHLKDRYRCITTDLPGFGMDGDDRDVKAEKLGYSIDEIVERLETTIEEVGNGSPVTIIAHDWGCTYSFLVEKRRPELVKKMVAIDVGGAVEPSLAGLVAIVSYHMWLIAAFRVGGAVGNAMARAFAWLVGAPDAARVATATSCYPYYHWWKRRLDKSQVQIKALVPEAPVLFLYGTAGYKSYLMFHADWWAKTIDAREGSFSVPMTGSKHWVTRDQPDDLNRRIDAFL 1413
+ I +PGLRTF GK+DGP I+FVHGWPDDH +WD QV HLKDR+RC+TTDLPGF D D + EK GYS +E+V+R+E T E VGNG P+ ++AHD+GC YSF E +RP+LV+KMVAIDVGGA++PS+ G + +V+Y +WL AAF +G +G+ +AR+FAWL+G+P AR+A A++CYPYYH WK L + +++ ++P+ P++FL+GTAG K + FHA WA+ + +EGS S + + HWVTRDQP+++NRR+D FL
Sbjct: 6 NAIVDDQPGLRTFASGKEDGPVILFVHGWPDDHLLWDAQVTHLKDRFRCVTTDLPGFSGD----DARVEKWGYSTEEVVKRIERTAERVGNGQPIILVAHDFGCMYSFKFEAKRPDLVRKMVAIDVGGAMKPSICGAMLMVTYQLWLCAAFLLGRPIGDGIARSFAWLMGSPSGARIARASTCYPYYHTWKHILCSGE-KVRPMMPQCPLMFLHGTAGVKKIMTFHAARWAEKVQEKEGSSSQGIPQASHWVTRDQPEEVNRRLDEFL 268
BLAST of mRNA_S-firma_F_contig1102.1366.1 vs. uniprot
Match: D8LK39_ECTSI (Short chain dehydrogenase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK39_ECTSI) HSP 1 Score: 301 bits (771), Expect = 9.230e-92 Identity = 141/264 (53.41%), Postives = 188/264 (71.21%), Query Frame = 1
Query: 637 LRTFLDGKKDGPTIVFVHGWPDDHSMWDKQVAHLKDRYRCITTDLPGFG--MDGDDRDVKAEKLGYSIDEIVERLETTIEEVGNGSPVTIIAHDWGCTYSFLVEKRRPELVKKMVAIDVGGAVE--PSLAGLVAIVSYHMWLIAAFRVGGAVGNAMARAFAWLVGAPDAARVATATSCYPYYHWWKRRLDKSQVQIKALVPEAPVLFLYGTAGYKSYLMFHADWWAKTIDAREGSFSVPMTGSKHWVTRDQPDDL-NRRIDAFL 1413
LR+F +G + GPT+VFVHGWPDDH++WD QVAHLKDRYRC+TTDLPGF DGD + K GYS +E+ +RLE TIE+VG G PV ++AHDWGC Y+F++EK RP+LVKK+VA+DVGG + PSL+ L++I Y +L+ AF +GG +G+AMAR FA L GAP A+ VA A+ CYPY H+WK ++ + + +P PVLF+YG+AG K + FHADWW I R+GS V +T + HW+ R + D+ N R+D F
Sbjct: 6 LRSFAEGNESGPTVVFVHGWPDDHTLWDAQVAHLKDRYRCVTTDLPGFSGDEDGDGGTASSSKWGYSFEEVAKRLERTIEDVGKGKPVFVVAHDWGCFYAFMLEKNRPDLVKKLVALDVGGGLSFWPSLS-LLSIALYQTYLMVAFLIGGRIGDAMARGFARLAGAPAASTVARASVCYPYIHFWKSQIQTC-LGMGPFMPRCPVLFMYGSAGMKKLMRFHADWWVDKISKRKGSSVVEVTEASHWLMRGRGGDVVNARLDTFF 267
BLAST of mRNA_S-firma_F_contig1102.1366.1 vs. uniprot
Match: B5JVQ5_9GAMM (Putative hydrolase of the alpha/beta fold superfamily n=1 Tax=gamma proteobacterium HTCC5015 TaxID=391615 RepID=B5JVQ5_9GAMM) HSP 1 Score: 176 bits (445), Expect = 1.310e-45 Identity = 94/274 (34.31%), Postives = 145/274 (52.92%), Query Frame = 1
Query: 646 FLDGKKDGP-TIVFVHGWPDDHSMWDKQVAHLKDRYRCITTDLPGFGMDGDDRDVKAEKLGYSIDEIVERLETTI--EEVGNGSPVTIIAHDWGCTYSFLVEKRRPELVKKMVAIDVGGAV--EPSLAGLVAIVSYHMWLIAAF------RVGGAVGNAMARA-------FAWLVGAPDAARVATATSCYPYYHWWKRRLDKSQVQIKALVPEAPVLFLYGTAGYKSYLMFHADWWAKTIDAREGSFSVPMTGSKHWVTRDQPDDLNRRIDAFL 1413
+ G KD T+VF+HG+PDD SMWD QVA+ + R+RC+ +LP FG D + GY + ++ +L + P+T++ HDWG Y +L +R PE VK++VA+DVG A+ +P+ G + + +Y + L +AF +G VGN + + F P + YPYY++WK L Q+ + +P+ P F YGT G K +MFH + W K + + + V S HW+ RD+P+ LNR I++FL
Sbjct: 19 YDSGPKDAEETLVFLHGYPDDSSMWDLQVAYFEKRFRCLRPELPNFG------DRVEDPAGYDFESVIRQLGDALGAHSPKLKGPLTLVVHDWGAVYGYLFAERYPERVKRLVALDVGAAIKKQPNPIGYLMVPAYQLTLASAFLISRVPAIGPFVGNLLTKGILAGLGLFGSQYSGPTRRTPLSPALNYPYYYFWKGVLT-GQLPLSMKLPDIPFFFAYGTRGLKKVMMFHDEAWLKKVSQKATNKVVAFEQSSHWLMRDEPEKLNREIESFL 285
BLAST of mRNA_S-firma_F_contig1102.1366.1 vs. uniprot
Match: A0A3N4DD41_9GAMM (Alpha/beta hydrolase n=2 Tax=Shewanella TaxID=22 RepID=A0A3N4DD41_9GAMM) HSP 1 Score: 174 bits (442), Expect = 1.680e-45 Identity = 86/252 (34.13%), Postives = 146/252 (57.94%), Query Frame = 1
Query: 673 TIVFVHGWPDDHSMWDKQVAHLKDRYRCITTDLPGFGMDGDDRDVKAEKLGYSIDEIVERLETTIEEVGNGSPVTIIAHDWGCTYSFLVEKRRPELVKKMVAIDVG--GAVEPSLAGLVAIV--SYHMWLIAAFRVGGAVGNAMARAFAWLVGAPDAARVATATSCYPYYHWWKRRLDKSQVQIKALVPEAPVLFLYGTAGYKSYLMFHADWWAKTIDAREGSFSVPMTGSKHWVTRDQPDDLNRRIDAFLD 1416
TIV +HGWPD + +WDKQV LKD+YRC+ LPG+ +D + + YS++EI+ ++ + ++ V +G PVT++ HDWGC + + R V +++ +D+G G++E L+ V + SY MWL A+++GG++G+AM R A ++ AP ++ T++ Y YY W + L + LV P+LF+YG MFH+ W + G+ VP ++HW+ ++P++ NR + +L+
Sbjct: 21 TIVMIHGWPDTYRLWDKQVEVLKDKYRCVRFTLPGYELDSN-------RGMYSLEEIISKINSVVDAVSDGQPVTLLLHDWGCFFGYQFYLRNEIKVNRIIGVDIGDAGSIEHELSLKVKLFMFSYQMWLALAWKLGGSLGDAMTRKMAKMLKAPGDQKLITSSMTYSYYWKWSKTLTGKPLGNLPLVVNCPLLFMYGE---NKPGMFHSKEWEHKMACIPGNKVVPFN-TRHWIMAEEPEEFNRVMLEWLE 261
BLAST of mRNA_S-firma_F_contig1102.1366.1 vs. uniprot
Match: UPI001669EC1E (alpha/beta hydrolase n=1 Tax=Undibacterium terreum TaxID=1224302 RepID=UPI001669EC1E) HSP 1 Score: 170 bits (431), Expect = 7.870e-44 Identity = 93/267 (34.83%), Postives = 141/267 (52.81%), Query Frame = 1
Query: 625 TRPGLRTFLDGKKDGPTIVFVHGWPDDHSMWDKQVAHLKDRYRCITTDLPGFGMDGDDRDVKAEKLGYSIDEIVERLETTIEEVGNGSPVTIIAHDWGCTYSFLVEKRRPELVKKMVAIDVGGA----VEPSLAGLVAIVSYHMWLIAAFRVGGAVGNAMARAFAWLVGAPDAARVATATSCYPYYHWWKRRLDKSQVQIKALVPEAPVLFLYGTAGYKSYLMFHADWWAKTIDAREGSFSVPMTGSKHWVTRDQPDDLNRRIDAFL 1413
T G+ +++G+ TIV +HGWPD H +WD+QVA L+DRYRC+ LPGF D + YS++E +E I++V +G V ++ HDWGC + + R P +V ++V +D+G +P+L + IVSY +WL AA+R+GG +G+AM R A A R + CYPY +W + P P+L++YG +K + MFH+ W + GS V S HWV ++QP N + +L
Sbjct: 20 TVEGIDVYMEGRG-RETIVMIHGWPDTHRLWDEQVAALRDRYRCVRFTLPGF-------DAGKPRRAYSLEETMEIFRRIIDKVCHGHKVILMLHDWGCVFGYQFYMRHPSMVSRIVGVDIGDVDSPDYQPTLKARLMIVSYQLWLAAAWRLGGRIGDAMTRGMARAARAYARPRDIGSRMCYPYDIFWTGS-HGGYKNTQLFKPACPMLYIYGK--HKPF-MFHSPAWLLELAEHPGS-EVLGIDSGHWVMKEQPHAFNEAVAYWL 273
BLAST of mRNA_S-firma_F_contig1102.1366.1 vs. uniprot
Match: A0A6I3SYR5_9BURK (Alpha/beta fold hydrolase n=2 Tax=Massilia buxea TaxID=1949069 RepID=A0A6I3SYR5_9BURK) HSP 1 Score: 168 bits (426), Expect = 3.320e-43 Identity = 90/280 (32.14%), Postives = 146/280 (52.14%), Query Frame = 1
Query: 634 GLRTFLDGKKDGP-TIVFVHGWPDDHSMWDKQVAHLKDRYRCITTDLPGFGMDGDDRDVKAEKLGYSIDEIVERLETTIEEVGNGSPVTIIAHDWGCTYSFLVEKRRPELVKKMVAIDVGGA------VEPSLAGLVAIVSYHMWLIAAFRVGGAVGNAMARAFAWLVGAPDAARVATATSCYPYYHWWKRRLDKSQVQIKALVPEAPVLFLYGTAGYKSYLMFHADWWAKTIDAREGSFSVPMTGSKHWVTRDQPDDLNRRIDAFLDKE*TCLPQTPSL 1452
G ++G GP TI+ +HGWPD+ ++W+ QVA K YRC+ PGF + A + +S+D ++ E + EV PV ++ HDWGC + + +R P+LV ++V +D+G A + + G + IV+Y +WL AA+R+GG++G +M + A + P T YPYY W + + + P P+LF+YGT + MFH+ WA+ +D++ GS +V M + HW Q D N+ + +L T +T +L
Sbjct: 8 GTEVLIEGS--GPETILLLHGWPDNRALWEGQVAAFKSHYRCVRFTWPGF-------EPGAPRGEHSLDSLIALCEAVVREVSPQRPVILLVHDWGCLFGYQFAQRHPDLVARIVGVDIGDAGSKDHLTDIGIKGKLGIVAYQLWLAAAWRIGGSIGESMTHSMARRMHVPAPPEALTVQKNYPYYSTWTGKYKSA----RTFRPACPMLFIYGT---RKPFMFHSSAWARELDSKPGSRAVAMD-TDHWPMLRQTDAFNQLVLDWLGST-TVTEKTDAL 269
BLAST of mRNA_S-firma_F_contig1102.1366.1 vs. uniprot
Match: A0A2N8ZDB0_9VIBR (AB hydrolase-1 domain-containing protein n=1 Tax=Vibrio tapetis subsp. tapetis TaxID=1671868 RepID=A0A2N8ZDB0_9VIBR) HSP 1 Score: 167 bits (423), Expect = 8.900e-43 Identity = 89/272 (32.72%), Postives = 141/272 (51.84%), Query Frame = 1
Query: 613 TISSTRPGLRTFLDGKKDGPTIVFVHGWPDDHSMWDKQVAHLKDRYRCITTDLPGFGMDGDDRDVKAEKLGYSIDEIVERLETTIEEVGNGSPVTIIAHDWGCTYSFLVEKRRPELVKKMVAIDVGGAVEPSLA----GLVAIVSYHMWLIAAFRVGGAVGNAMARAFAWLVGAPDAARVATATSCYPYYHWWKRRLDKSQVQIKALVPEAPVLFLYGTAGYKSYLMFHADWWAKTIDAREGSFSVPMTGSKHWVTRDQPDDLNRRIDAFLD 1416
T + T G F+DG + TIV +HGWPD + +W QV HLK +YRC+ LPG+ + + Y +D ++ +++ +E V NG PVT++ HDWGC Y + R VK+++ +DVG A P + + +VSY +WL+AA+ +GG VG+ M R A L AP + + + Y Y+ W + + K L + P LF+YG + FH+ W + EG+ + + + HWV +QPD N + +L+
Sbjct: 2 TETITVNGNDVFIDGSGE-ETIVMLHGWPDTYRLWQPQVEHLKSQYRCVRFSLPGY-------EKHHPRNYYDLDAVLSVIDSVVETVSNGKPVTLLLHDWGCVYGYQYYMRNQAKVKRIIGVDVGDAGSPDMTLSTKAKLVLVSYQLWLMAAWNIGGGVGDWMTRKVATLFNAPAPSELVHSGMTYSYHWRWSSTFMRRPLGTKPLDIQVPFLFIYGGNKVGN---FHSKPWQTKMANIEGNQVIELP-THHWVMVEQPDAFNEAVMDWLN 261
BLAST of mRNA_S-firma_F_contig1102.1366.1 vs. uniprot
Match: A0A161JJ08_9GAMM (AB hydrolase-1 domain-containing protein n=1 Tax=Dyella thiooxydans TaxID=445710 RepID=A0A161JJ08_9GAMM) HSP 1 Score: 166 bits (421), Expect = 1.440e-42 Identity = 90/257 (35.02%), Postives = 137/257 (53.31%), Query Frame = 1
Query: 664 DGP-TIVFVHGWPDDHSMWDKQVAHLKDRYRCITTDLPGFGMDGDDRDVKAEKLGYSIDEIVERLETTIEEVGNGSPVTIIAHDWGCTYSFLVEKRRPELVKKMVAIDVG--GAV----EPSLAGLVAIVSYHMWLIAAFRVGGAVGNAMARAFAWLVGAPDAARVATATSCYPYYHWWKRRLDKSQVQIKALVPEAPVLFLYGTAGYKSYLMFHADWWAKTIDAREGSFSVPMTGSKHWVTRDQPDDLNRRIDAFL 1413
+GP ++V +HGWPD H +WD V L DRYRC+ DLPGFG + Y+IDE+VE + + E G V ++ HDWGC + + R P LV +++ +D+G G+V E L+G+ A+V+Y +WL A+R+GG +G+AMAR A ++ P R TA YPY W S + + P P+L++YG + H+ W + I A GS ++ + G HWV D + + ++L
Sbjct: 13 EGPASVVMIHGWPDTHRLWDASVDALSDRYRCVRFDLPGFGR-------AHPRRAYAIDEVVEAIHRVVVEACPGERVCLLLHDWGCYFGYKFAMRHPHLVARVIGVDIGDAGSVDHRRELGLSGIAAVVAYQLWLALAWRIGGRIGDAMARGMARVLHCPGDPRAVTAQMGYPYAVSWLGVAGGSHDR-RVFAPHCPMLYVYGE---RKPFTLHSTRWIEAIAALPGSRALGLPGG-HWVMIDCRHAFHDAVRSWL 257
BLAST of mRNA_S-firma_F_contig1102.1366.1 vs. uniprot
Match: A8FVT6_SHESH (AB hydrolase-1 domain-containing protein n=3 Tax=Shewanella TaxID=22 RepID=A8FVT6_SHESH) HSP 1 Score: 166 bits (419), Expect = 2.260e-42 Identity = 93/263 (35.36%), Postives = 141/263 (53.61%), Query Frame = 1
Query: 646 FLDGKKDGPTIVFVHGWPDDHSMWDKQVAHLKDRYRCITTDLPGFGMDGDDRDVKAEKLGYSIDEIVERLETTIEEVGNGSPVTIIAHDWGCTYSFLVEKRRPELVKKMVAIDVG--GAVEPSLAGLVA--IVSYHMWLIAAFRVGGAVGNAMARAFAWLVGAPDAARVATATSCYPYYHWWKRRLDKSQVQIKALVPEAPVLFLYGTAGYKSYLMFHADWWAKTIDAREGSFSVPMTGSKHWVTRDQPDDLNRRIDAFLDKE 1422
+++G D TIV VHGWPD + +WDKQV LKDRYRC+ LPG+ D + Y + EIV+ + T ++ VGNG PVT++ HDWGC + + E V +++ +D+G G+ E L+ V + Y MWL AA+++GG +G+AM R A L+ AP T++ Y YY W L + L P+LF+YG MFH+ W + I + + + P ++HWV + P+ N + +L K+
Sbjct: 13 YVEGMGD-ETIVMVHGWPDTYRVWDKQVEVLKDRYRCVRFTLPGY-------DKSKPRRAYDLKEIVQLINTIVDTVGNGKPVTLMLHDWGCFFGYQFYMNYREKVTRIIGVDIGDAGSKEHVLSAKVKAFMFGYQMWLAAAWKIGGKLGDAMTRKMAKLLHAPGEPGSITSSMTYSYYWKWSHVLTGRSLDHLPLEITCPLLFMYGE---NKPGMFHSTPWVEKIASDKRNRVEPFQ-TRHWVMIEAPERFNNIMLDWLGKK 263 The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig1102.1366.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-firma_F_contig1102.1366.1 >prot_S-firma_F_contig1102.1366.1 ID=prot_S-firma_F_contig1102.1366.1|Name=mRNA_S-firma_F_contig1102.1366.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=325bp MALLTQTLSPLHLASTANLVQVRAFFHASRTLRRSCVDHGSRIMKRSLQVback to top mRNA from alignment at S-firma_F_contig1102:5760..10970- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-firma_F_contig1102.1366.1 ID=mRNA_S-firma_F_contig1102.1366.1|Name=mRNA_S-firma_F_contig1102.1366.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=5211bp|location=Sequence derived from alignment at S-firma_F_contig1102:5760..10970- (Sphaerotrichia firma ET2_F female)back to top Coding sequence (CDS) from alignment at S-firma_F_contig1102:5760..10970- >mRNA_S-firma_F_contig1102.1366.1 ID=mRNA_S-firma_F_contig1102.1366.1|Name=mRNA_S-firma_F_contig1102.1366.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=1950bp|location=Sequence derived from alignment at S-firma_F_contig1102:5760..10970- (Sphaerotrichia firma ET2_F female)back to top |