mRNA_S-firma_F_contig11004.1345.1 (mRNA) Sphaerotrichia firma ET2_F female
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Overview
Homology
BLAST of mRNA_S-firma_F_contig11004.1345.1 vs. uniprot
Match: G4YQV2_PHYSP (Uncharacterized protein n=6 Tax=Phytophthora TaxID=4783 RepID=G4YQV2_PHYSP) HSP 1 Score: 212 bits (540), Expect = 1.760e-62 Identity = 118/279 (42.29%), Postives = 164/279 (58.78%), Query Frame = 1
Query: 16 VFSVPASLLLSVSTAEES--LPEVFALREELSLTEDDLLAIHLMHEKHVVGDGSRWKPHIDLLPAGEDVHNAFYFTDDEKRLLAGSNIAHLAQVMQNQVRMDYARIFPTLFRKCALTVLCVVDAAPPRSTFSMNEYRWAIAMIWSRFVSIPLGKASFKAMVPFFDMLNHSPTARTRHEFDATTSSFRLVTDVKIKAGEQVHLNYGPLGNQRLLQYKGFVIPGNPFDHVDVYLGMDPSADNY--EAKQAVFTRCSQMPTVPFPLIADRLNDRFIATLRVQ 840
VFS+P +LSV + +E+ L + ++ EDD LAI L++EK V G S+W HI+LLP HNA YF +E R L GSN+ +AQ M+ +V DYAR+ ++ + V ++ FS+ Y+WA++ IWSRF +P+ K SFKAMVP FDMLNH P A H FD +T F+LV+ AG Q+ +NYGPL N +LL GFVI GNPFD V+++L MD ++ + E +Q + T T PF L+AD ND + R+Q
Sbjct: 59 VFSIPLDSVLSVKSLQENAVLQSIAFFQQLTPEREDDQLAIALLYEKFVRGSKSKWAKHIELLP--RTYHNALYFGPEELRALEGSNVYFIAQQMEEKVAHDYARLKESVLLELFENVPEGINVDLFDEFFSLENYKWALSTIWSRFGDVPVAKQSFKAMVPVFDMLNHDPEAEMSHFFDMSTQRFKLVSHQHWNAGAQMFINYGPLSNHKLLALYGFVIIGNPFDAVEMWLPMDEASTKFFQEKEQLLLTNGLDHATNPFELVADESNDLLLMAARIQ 335
BLAST of mRNA_S-firma_F_contig11004.1345.1 vs. uniprot
Match: A0A485L3E1_9STRA (Aste57867_15011 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L3E1_9STRA) HSP 1 Score: 202 bits (513), Expect = 1.530e-58 Identity = 120/288 (41.67%), Postives = 163/288 (56.60%), Query Frame = 1
Query: 16 VFSVPASLLLSVSTAEESLPEVFALREELSLT--EDDLLAIHLMHEKHVVGDGSRWKPHIDLLPAGEDVHNAFYFTDDEKRLLAGSNIAHLAQVMQNQVRMDYARIFPTLFRKCALTVLCVVDAAPPRSTFSMNEYRWAIAMIWSRFVSIPLGKASF-KAMVPFFDMLNHSPTARTRHEFDATTSSFRLVTDVKIKAGEQVHLNYGPLGNQRLLQYKGFVIPGNPFDHVDVYLGMDPSADNYEAKQAVFTR---CSQMPTVPFPLIADRLNDRFIATLRVQRATKAEL 861
V S+PA LL+V T +S L++ LSL EDD+LA LM+E + S+WK H+D+LP + HN YFT DE +L GSN+ ++A +Q QV D+A + TL + A FSMN Y+WA+++IWSRFVS+ L + K+MVP FDM NH PTA+ H FD TT+SF L T AG Q+ +NYG L N +LL GFV+ NPFD V++Y M A ++ K + + VPF L AD +ND +A LR+QR +L
Sbjct: 49 VLSIPAESLLNVHTMAQS-----PLKDLLSLPLCEDDMLAWFLMYETFL-NPSSKWKRHLDVLP--KTFHNILYFTQDEIDMLEGSNVYYVAMQLQKQVASDFAALQQTLLPDTLRLLSADFSAETLLDAFSMNHYKWALSVIWSRFVSVALDEDILAKSMVPVFDMFNHDPTAQMTHGFDPTTNSFVLRTHQHWSAGSQIFINYGALPNHKLLPLYGFVLASNPFDAVELYAPMGEDAPDFSRKLELLEDHGLAEHVAGVPFELFADSVNDELLAYLRIQRLDGGDL 328
BLAST of mRNA_S-firma_F_contig11004.1345.1 vs. uniprot
Match: A0A0W8CD61_PHYNI (Ribosomal N-lysine methyltransferase set10 n=9 Tax=Phytophthora TaxID=4783 RepID=A0A0W8CD61_PHYNI) HSP 1 Score: 200 bits (509), Expect = 1.330e-57 Identity = 115/294 (39.12%), Postives = 164/294 (55.78%), Query Frame = 1
Query: 16 VFSVPASLLLSVSTAEE--SLPEVFALREELSLTEDDLLAIHLMHEKHVVGDGSRWKPHIDLLPAGEDVHNAFYFTDDEKRLLAGSNIAHLAQVMQNQVRMDYARIFPTLFRKCALTVLCVVDAAPPRSTFSMNEYRWAIAMIWSRFVS---------------IPLGKASFKAMVPFFDMLNHSPTARTRHEFDATTSSFRLVTDVKIKAGEQVHLNYGPLGNQRLLQYKGFVIPGNPFDHVDVYLGMDPSADNY--EAKQAVFTRCSQMPTVPFPLIADRLNDRFIATLRVQ 840
VFS+P +LSV + +E +L + ++ EDD LA+ L++EK V GD S+W HI+LLP + HNA YF +E + L GSN+ +AQ M+ +V DY + T+ + + + FS++ Y+WA++ IWSRFVS +P+ K SFKAMVP FDMLNH P A H FD T F+LV+ AG Q+ +NYGPL N +LL GFVI GNPFD V+++L MD ++ + E +Q + T PF L+A+ ND + R+Q
Sbjct: 63 VFSIPLDSVLSVKSLQEISALQNIAFFQQLTPEREDDQLALALLYEKFVQGDKSKWAKHIELLP--KTYHNALYFEQEEIKALEGSNLFFIAQQMEKKVAADYTSLKETVLLELFENITEGITVDLFDDFFSLDNYKWALSTIWSRFVSLRLDEAPSSKDSSSSVPVAKQSFKAMVPVFDMLNHDPEAEMSHFFDMDTQLFKLVSHQHWNAGTQMFINYGPLSNHKLLLLYGFVIIGNPFDAVEMWLPMDEASTKFYLEKEQFLLINGLDHATNPFELVAEETNDLLLMATRIQ 354
BLAST of mRNA_S-firma_F_contig11004.1345.1 vs. uniprot
Match: A0A2P4WYX0_9STRA (Histone-lysine N-methyltransferase n=2 Tax=Phytophthora TaxID=4783 RepID=A0A2P4WYX0_9STRA) HSP 1 Score: 199 bits (505), Expect = 3.440e-57 Identity = 115/280 (41.07%), Postives = 163/280 (58.21%), Query Frame = 1
Query: 16 VFSVPASLLLSVSTAEES--LPEVFALREELSLTEDDLLAIHLMHEKHVVGDGSRWKPHIDLLPAGEDVHNAFYFTDDEKRLLAGSNIAHLAQVMQNQVRMDYARIFPTLFRKCALTVLCVVDAAPPRSTFSMNEYRWAIAMIWSRFVS--IPLGKASFKAMVPFFDMLNHSPTARTRHEFDATTSSFRLVTDVKIKAGEQVHLNYGPLGNQRLLQYKGFVIPGNPFDHVDVYLGMDP-SADNYEAKQAVFTRCSQMPTVPFPLIADRLNDRFIATLRVQ 840
VFS+P +LSV + +E+ L + ++ EDD LAI L++EK V+G S+W HI+LLP + +NA Y + +LL GSN+ +AQ M+ +V +DYAR+ ++ + V ++ FS Y+WA++ IWSRFV P+ K SFKAMVP FDMLNH P A H FD T F+LV+ AG Q+ +NYG L N +LL GFVI GNPFD V+++L MD SA +E +Q + + + PF L+AD ND + R+Q
Sbjct: 59 VFSIPLDSVLSVKSLQENAVLQGIEFFQQLTPEREDDQLAIALLYEKFVLGSKSKWSKHIELLP--QTYYNALYIEQEVLKLLEGSNLFFIAQQMEQKVALDYARLKESVLLELFENVTEGINFDLFDEYFSFENYKWALSTIWSRFVKSDAPVAKQSFKAMVPVFDMLNHDPEAEMSHFFDMDTQRFKLVSHQHWNAGAQMFINYGALSNHKLLSLYGFVIIGNPFDAVEMWLPMDEGSAFFHEKEQLLLSNGLDHASNPFELVADETNDLLLMATRIQ 336
BLAST of mRNA_S-firma_F_contig11004.1345.1 vs. uniprot
Match: W2KAV5_PHYPR (Uncharacterized protein n=1 Tax=Phytophthora parasitica TaxID=4792 RepID=W2KAV5_PHYPR) HSP 1 Score: 199 bits (506), Expect = 3.690e-57 Identity = 114/294 (38.78%), Postives = 164/294 (55.78%), Query Frame = 1
Query: 16 VFSVPASLLLSVSTAEE--SLPEVFALREELSLTEDDLLAIHLMHEKHVVGDGSRWKPHIDLLPAGEDVHNAFYFTDDEKRLLAGSNIAHLAQVMQNQVRMDYARIFPTLFRKCALTVLCVVDAAPPRSTFSMNEYRWAIAMIWSRFVS---------------IPLGKASFKAMVPFFDMLNHSPTARTRHEFDATTSSFRLVTDVKIKAGEQVHLNYGPLGNQRLLQYKGFVIPGNPFDHVDVYLGMDPSADNY--EAKQAVFTRCSQMPTVPFPLIADRLNDRFIATLRVQ 840
VFS+P +LSV + +E +L + ++ EDD LA+ L++EK V GD S+W HI+LLP + HNA YF +E + L GSN+ +AQ M+ +V DY + T+ + + + FS++ Y+WA++ IWSRFVS +P+ K SFKAMVP FDMLNH P A H FD T F+LV+ AG Q+ +NYGPL N +LL GFVI GNPFD V+++L MD ++ + E +Q + T P+ L+A+ ND + R+Q
Sbjct: 63 VFSIPLDSVLSVKSLQEISALQNIAFFQQLTPEREDDQLALALLYEKFVQGDKSKWAKHIELLP--KTYHNALYFEQEEIKALEGSNLFFIAQQMEKKVAADYTSLKETVLLELFENITEGITVDLFDDFFSLDNYKWALSTIWSRFVSLRLDEAPSSKDSSSSVPVAKQSFKAMVPVFDMLNHDPEAEMSHFFDMDTQLFKLVSHQHWNAGTQMFINYGPLSNHKLLLLYGFVIIGNPFDAVEMWLPMDEASTKFYLEKEQFLLINGLDHATNPYELVAEETNDLLLMATRIQ 354
BLAST of mRNA_S-firma_F_contig11004.1345.1 vs. uniprot
Match: W4G0U4_9STRA (Uncharacterized protein n=6 Tax=Aphanomyces astaci TaxID=112090 RepID=W4G0U4_9STRA) HSP 1 Score: 196 bits (498), Expect = 3.490e-56 Identity = 116/302 (38.41%), Postives = 170/302 (56.29%), Query Frame = 1
Query: 1 QSSKVVFSVPASLLLSVSTAEESLPEVFALRE--ELSLTEDDLLAIHLMHEKHVVGDGSRWKPHIDLLPAGEDVHNAFYFTDDEKRLLAGSNIAHLAQVMQNQVRMDYARIFPTLFRKCALTVLCVVDAAPPRSTFSMNEYRWAIAMIWSRFVSIPL----------GKASFKAMVPFFDMLNHSPTARTRHEFDATTSSFRLVTDVKIKAGEQVHLNYGPLGNQRLLQYKGFVIPGNPFDHVDVYLGMDPSADNYEAKQAVFTR---CSQMPTVPFPLIADRLNDRFIATLRVQRATKAEL 861
Q+ + S+PA+ LL+V T +S+ LR+ L L EDD LA L++E+ V S+WK H+D++P + HN YFT+DE +L GSN+ ++A ++ QV D+ + TL + A F++ Y+WA+++IWSRFVSI + A+ K+MVP FDM NH P A+ H FD TT+SF L + AG QV++NYG L N +LL GFV+P NPFD V+++ M +Y+ K A+ T + PF L +D +ND +A+LR+QR T EL
Sbjct: 44 QAQTTILSIPAASLLNVHTMAQSV-----LRDLVSLPLREDDCLAWFLIYERFV-NPQSKWKRHLDVMP--QAFHNILYFTEDEINMLQGSNVYYVALQLKQQVASDFGELQRTLLPTTLRLLHADHSADDLIRVFTIENYKWALSVIWSRFVSIAIHATAADXXXXXXAAVKSMVPVFDMFNHDPFAQMSHGFDPTTNSFVLRSHQHWPAGSQVYMNYGALPNHKLLTLYGFVLPSNPFDVVELWAPMHEDVPSYDRKLALLTAHGLAEHATSTPFDLYSDSVNDELLASLRIQRLTDTEL 337
BLAST of mRNA_S-firma_F_contig11004.1345.1 vs. uniprot
Match: A0A024UBV8_9STRA (SET domain-containing protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UBV8_9STRA) HSP 1 Score: 193 bits (491), Expect = 3.010e-55 Identity = 117/289 (40.48%), Postives = 160/289 (55.36%), Query Frame = 1
Query: 16 VFSVPASLLLSVSTAEESLPEVFALRE--ELSLTEDDLLAIHLMHEKHVVGDGSRWKPHIDLLPAGEDVHNAFYFTDDEKRLLAGSNIAHLAQVMQNQVRMDYARIFPTLFRKCALTVLCVVDAAPPRSTFSMNEYRWAIAMIWSRFVSIPLGKAS--FKAMVPFFDMLNHSPTARTRHEFDATTSSFRLVTDVKIKAGEQVHLNYGPLGNQRLLQYKGFVIPGNPFDHVDVYLGMDPSADNYEAKQAVFTR---CSQMPTVPFPLIADRLNDRFIATLRVQRATKAEL 861
+ S+PA LL+V T +S ALR+ L L EDD LA L++E+ V S+WK H+D+LP HN YFT+DE +L GSN+ ++A ++ QV D+A + TL + A + F++ Y+WA+++IWSRFVS+ L K+MVP FDM NH P A+ H FD TT++F L + AG QV +NYG L N +LL GFV+P NPFD V+++ M A Y K A+ T PF L D LND +A LR+QR EL
Sbjct: 49 ILSIPAESLLNVHTMTQS-----ALRDLASLPLREDDCLAWFLIYERFV-NPQSKWKRHLDVLP--HSFHNILYFTEDEINMLQGSNVYYVALQLKQQVVSDFAELQQTLLPDTLRLLHAEHSADVLMAVFTLENYKWALSVIWSRFVSVALDAEDNLAKSMVPVFDMFNHDPHAQMSHGFDPTTNAFVLRSHQHWTAGSQVCINYGALPNHKLLTLYGFVLPSNPFDVVELWAPMSDDAPYYNRKLALMTGHGLADHATAAPFELYPDSLNDELLAYLRIQRLDVGEL 329
BLAST of mRNA_S-firma_F_contig11004.1345.1 vs. uniprot
Match: A0A833SR06_PHYIN (Rubisco LSMT substrate-binding n=2 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833SR06_PHYIN) HSP 1 Score: 192 bits (487), Expect = 4.450e-54 Identity = 113/298 (37.92%), Postives = 163/298 (54.70%), Query Frame = 1
Query: 16 VFSVPASLLLSVSTAEE--SLPEVFALREELSLTEDDLLAIHLMHEKHVVGDGSRWKPHIDLLPAGEDVHNAFYFTDDEKRLLAGSNIAHLAQVMQNQVRMDYARIFPTLFRKCALTVLCVVDAAPPRSTFSMNEYRWAIAMIWSRFVSI-------------------PLGKASFKAMVPFFDMLNHSPTARTRHEFDATTSSFRLVTDVKIKAGEQVHLNYGPLGNQRLLQYKGFVIPGNPFDHVDVYLGMDPSADNY--EAKQAVFTRCSQMPTVPFPLIADRLNDRFIATLRVQ 840
VFS+P +LSV + ++ +L + ++ EDD LAI L++EK++ GD S+W HI+LLP + HNA YF E + L GSN+ +AQ M+ +V DYA + ++ + + + FS++ Y+WA++ IWSRFVS+ P+ K SFKAMVP FDMLNH P A H FD T F+LV+ AG Q+ +NYG L N +LL GFVI GN FD VD++L MD ++ + E +Q + T PF L+A+ ND + R+Q
Sbjct: 89 VFSIPLDSVLSVKSLQDISALQSITFFQQLTPEREDDQLAIALLYEKYMQGDKSKWAKHIELLP--KTYHNALYFEAGEIKALEGSNLFFIAQQMEEKVASDYAVLKESVLFELFENITEGITVDLFDEIFSLDNYKWALSTIWSRFVSLRLDEAPSEREIEELKGSSLPVAKQSFKAMVPVFDMLNHDPEAEMSHFFDMETQCFKLVSHQHWNAGAQMFINYGALSNHKLLSLYGFVIIGNLFDAVDMWLPMDEASTKFYHEKEQLLLVNGLDHATNPFELVAEETNDLLLMATRIQ 384
BLAST of mRNA_S-firma_F_contig11004.1345.1 vs. uniprot
Match: A0A8K1C412_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C412_PYTOL) HSP 1 Score: 189 bits (479), Expect = 3.120e-53 Identity = 112/276 (40.58%), Postives = 155/276 (56.16%), Query Frame = 1
Query: 40 LLSVSTAEESLPEVFALREELSLTEDDLLAIHLMHEKHVVGDGSRWKPHIDLLPAGEDVHNAFYFTDDEKRLLAGSNIAHLAQVMQNQVRMDYARIFPTLFRKCALTVLCVVDAAPPRST------FSMNEYRWAIAMIWSRFVSIPLGKASF-KAMVPFFDMLNHSPTARTRHEFDATTSSFRLVTDVKIKAGEQVHLNYGPLGNQRLLQYKGFVIPGNPFDHVDVYLGMDPSADN-YEAKQAVFTRCS-QMPTVPFPLIADRLNDRFIATLRVQ 840
+LS A+ES PE + EDD+LA L++E+ + D S+W H+ LLP HNA YFTD E +L GS + ++AQ M+ V +AR+ TLF A V V P RS FS+ Y+WA++ IWSRFVS+ + A+F KAM P FDMLNH P A H FD T +F+L + AG Q+ +NYG L N +LL GFV+P NPFD V+++L MDPS+ + +E K + PF L D L++ + +R+Q
Sbjct: 85 VLSWVEAQESSPE------DGVDVEDDVLATTLLYERFIARDKSKWWRHLQLLPT--TYHNALYFTDKEVEMLQGSTVCYIAQQMKTNVDAGFARLKQTLFADIADAV---VTHHPERSIEQVEACFSLENYKWALSTIWSRFVSLQIASATFRKAMAPVFDMLNHDPDAEMSHHFDTETQTFQLTSYQHWSAGSQLCINYGALSNHKLLTLYGFVLPENPFDAVEMWLPMDPSSTSEFETKVKLLEEIDVDHEVTPFELTVDELDELLLIVMRIQ 349
BLAST of mRNA_S-firma_F_contig11004.1345.1 vs. uniprot
Match: H3GMD8_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GMD8_PHYRM) HSP 1 Score: 188 bits (478), Expect = 4.990e-53 Identity = 117/303 (38.61%), Postives = 161/303 (53.14%), Query Frame = 1
Query: 16 VFSVPASLLLSV-STAEESLPEVFALREELSLT-EDDLLAIHLMHEKHVVGDGSRWKPHIDLLPAGEDVHNAFYFTDDEKRLLAGSNIAHLAQVMQNQVRMDYARIFPTLFRKCALTVLCVVDAAPPRSTFSMNEYRWAIAMIWSRFVSI------------------------PLGKASFKAMVPFFDMLNHSPTARTRHEFDATTSSFRLVTDVKIKAGEQVHLNYGPLGNQRLLQYKGFVIPGNPFDHVDVYLGMDPSADNY--EAKQAVFTRCSQMPTVPFPLIADRLNDRFIATLRVQ 840
VFS+P +LSV S E+++ + ++LS EDD LAI L++EK V G S+W HI+LLP +NA Y E L GSN+ +AQ M+ +V DYAR+ ++ + V ++ FS Y+WA++ IWSRFVS+ P+ K SFKAMVP FDMLNH P A H FD + F+LV+ AG Q+ +NYG L N +LL GFVI GNPFD V+++L MD ++ E +Q + T T PF L+AD ND + R+Q
Sbjct: 54 VFSIPLDSVLSVKSLQEDAVLQSMEFFQQLSPEREDDQLAIALLYEKFVRGAQSKWAQHIELLP--RTYYNALYLDQSELNALTGSNVFFVAQQMEKKVAQDYARLKESVLLELFENVTEGINFDLFDEFFSFENYKWALSTIWSRFVSLRVDETVSFAEDDKPAEENAKKSDAPVAKQSFKAMVPVFDMLNHDPEAEMSHFFDMASQRFKLVSHQHWNAGAQMFINYGALSNHKLLSLYGFVILGNPFDAVEMWLPMDEASTKLFQEKEQLLLTNGLDHATSPFELVADESNDLLLMAARIQ 354 The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig11004.1345.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-firma_F_contig11004.1345.1 >prot_S-firma_F_contig11004.1345.1 ID=prot_S-firma_F_contig11004.1345.1|Name=mRNA_S-firma_F_contig11004.1345.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=287bp QSSKVVFSVPASLLLSVSTAEESLPEVFALREELSLTEDDLLAIHLMHEKback to top mRNA from alignment at S-firma_F_contig11004:329..1232+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-firma_F_contig11004.1345.1 ID=mRNA_S-firma_F_contig11004.1345.1|Name=mRNA_S-firma_F_contig11004.1345.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=904bp|location=Sequence derived from alignment at S-firma_F_contig11004:329..1232+ (Sphaerotrichia firma ET2_F female)back to top Coding sequence (CDS) from alignment at S-firma_F_contig11004:329..1232+ >mRNA_S-firma_F_contig11004.1345.1 ID=mRNA_S-firma_F_contig11004.1345.1|Name=mRNA_S-firma_F_contig11004.1345.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=1722bp|location=Sequence derived from alignment at S-firma_F_contig11004:329..1232+ (Sphaerotrichia firma ET2_F female)back to top |