mRNA_S-firma_F_contig1100.1340.1 (mRNA) Sphaerotrichia firma ET2_F female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-firma_F_contig1100.1340.1
Unique NamemRNA_S-firma_F_contig1100.1340.1
TypemRNA
OrganismSphaerotrichia firma ET2_F female (Sphaerotrichia firma ET2_F female)
Homology
BLAST of mRNA_S-firma_F_contig1100.1340.1 vs. uniprot
Match: B5LWC7_9PHYC (Putative nosD copper-binding protein n=1 Tax=Feldmannia species virus TaxID=39420 RepID=B5LWC7_9PHYC)

HSP 1 Score: 503 bits (1294), Expect = 2.340e-170
Identity = 262/498 (52.61%), Postives = 336/498 (67.47%), Query Frame = 1
Query:    7 LFRFLLVLGLRLHAECATISVTPKGSIQEALNEAQPGDTVVLGDGEYSQDFRSVRDGTPDKRITITGSRKAVVHGTKRESRMIQIFHSYITLDGFTASGLAPSSQGNLVDDYVDKCVYILGTSPPKVVRENGVEYESSLDGVVVRNMHIKDCGGECLRLRSFITNAEVVGNKIEGCGRHDFKFESTSKNGEAIYVGTSSNQWDDGKNSRAGPDLSKYIWIHKNIIDAQGNECVDVKEGTTDVLVEYNACSDQRDPNSGCLDSRTDDIIFRYNRISDCEGAGIRIGGHTINGKTYGVNNEIYGNVFKNTTHSSIKVQTGDDHNLCGNTCDE--CVLKSKSPALT-GIEDTCQTMRDIKWI---------VKPTNNCKLAKITESSASNHDGNLPGNAVDGDADTRWSARGDGEWLSVKLQKAVRVESLQMSFYQGDNRQQFFDVYADGKPLLLNAKSSGKTTGLQSFPVPDPTTVTTVTIVFRGNSKDAWNSVTEVMVC 1464
            +FR L+ L L L     T  ++PK SIQ  L++A+PGDT+VLGDGEY QD +SV  GTPD+RIT+ GSR+AVV G    SR+++I HSYITL+GFT SG     +G   ++Y DKCV+ILGT+ P+++RENG EY+SSLDGVVV+ M I+DCGGECLR+RSF TN E+ GN+IEGCGR DF    +SKNGEAIY+GTSSNQW DGKNSR GPD +KY+W+H N ID+QGNECV+VKEG +DVLVEYN C+DQ+D NS  + SRTDD+ FRYN ISDC GAGIRIGGHTI  KTYG NNE+YGNVF +T +SS+KV+TG +H  C N+C +  C ++     L   I   C T+RD  W          +     C  +KI + S S  +G+    + DG A   ++      W+S+  +   R  SL+M F  GD     FDVY DG+PLLL+ KSSG T   ++F    P  ++ ++I   GNS+D     TEV VC
Sbjct:    1 MFRVLIWLSLLLPCFGKTTDLSPKDSIQAHLDKARPGDTIVLGDGEYEQDLKSVTHGTPDQRITVKGSRRAVVRGAD-SSRVVEINHSYITLEGFTVSG----KRGG--EEYADKCVFILGTAKPRIIRENGGEYQSSLDGVVVKGMQIQDCGGECLRVRSFATNVEIYGNRIEGCGRDDFHLGGSSKNGEAIYIGTSSNQWHDGKNSRDGPDYTKYVWVHDNTIDSQGNECVEVKEGASDVLVEYNVCTDQQDSNSAGMGSRTDDVTFRYNDISDCLGAGIRIGGHTIGDKTYGENNEVYGNVFHDTEYSSVKVETGKNHVFCENSCGDGSCTVRGNRVELVESIVGPCGTLRDFPWASSKQSDRRALSANEGCSSSKIRDLSFS--EGSTGLKSADGKAVASFTGHVPDAWVSLNFEGRTRFNSLEMEFPGGDRVVYSFDVYGDGEPLLLDQKSSGTTLTGETFVFEKPVEISELSIFGHGNSEDDETRFTEVRVC 489          
BLAST of mRNA_S-firma_F_contig1100.1340.1 vs. uniprot
Match: Q6XM06_9PHYC (FirrV-1-B30 n=1 Tax=Feldmannia irregularis virus a TaxID=231992 RepID=Q6XM06_9PHYC)

HSP 1 Score: 452 bits (1163), Expect = 5.110e-150
Identity = 237/481 (49.27%), Postives = 315/481 (65.49%), Query Frame = 1
Query:   25 VLGLRLHAECAT---ISVTPKGSIQEALNEAQPGDTVVLGDGEYSQDFRSVRDGTPDKRITITGSRKAVVHGTKRESRMIQIFHSYITLDGFTASGLAPSSQGNLVDDYVDKCVYILGTSPPKVVRENGVEYESSLDGVVVRNMHIKDCGGECLRLRSFITNAEVVGNKIEGCGRHDFKFESTSKNGEAIYVGTSSNQWDDGKNSRAGPDLSKYIWIHKNIIDAQGNECVDVKEGTTDVLVEYNACSDQRDPNSGCLDSRTDDIIFRYNRISDCEGAGIRIGGHTINGKTYGVNNEIYGNVFKNTTHSSIKVQTGDDHNLCGNTCDE--CVLKSKSPALTG--IEDTCQT--MRDIKW--------IVKPTNNCKLAKITESSASNHDGNLPGNAVDGDADT--RWSARGDGEWLSVKLQ-KAVRVESLQMSFYQGDNRQQFFDVYADGKPLLLNAKSSGKTTGLQSFPVPDPTTVTTVTI 1407
            V+G  L A  A      +TP  SIQ  L++A+PGDT+ L +G+Y+QD ++VR G     ITI GS+KAVV G+  E R++++ HSY TL GFT SG    + GN   DYVDKC++++G S P++ R +G+EYESS+ GV++ +M ++DCGGEC+RLRSF+T+AEV GN+IE CGRHD+ F+   KNGEAIYVGTSSNQW+DGKNS++GPD +KYIWIH N+ID Q NECVDVKEG+TDVLVEYNACS+Q D NS   DSRTDD+ FRYN +S+C GAGIRIGGH I+GKTYG NNE YGNV +N  +S+IKV+TG  H  C N C +  C +K       G   +DTC T  +R   W        ++    +C    + + + SN        AV  D  T  RWS   +G W+S+K   + V V  + + F  GD     F +Y DG P+LL+  SSG T   + F + D T ++ +T+
Sbjct:   31 VVGALLCASAAVGEIFKLTPSDSIQRVLDKARPGDTLRLAEGKYAQDIQTVRSG-----ITIEGSKKAVVMGSGHEHRIVEVNHSYTTLRGFTVSG--KRNSGNDPSDYVDKCIFVMGISSPEIERTSGIEYESSITGVIIEDMEVEDCGGECIRLRSFVTHAEVTGNRIERCGRHDYLFDGAGKNGEAIYVGTSSNQWNDGKNSKSGPDKTKYIWIHDNVIDTQANECVDVKEGSTDVLVEYNACSNQLDTNSAGFDSRTDDVTFRYNEVSNCAGAGIRIGGHKIDGKTYGENNEAYGNVMRNNAYSAIKVETGKQHVFCQNDCGKEGCTVKGNRAESVGGDPDDTCITRDLRQFDWTDHQPGRVLLAVGRDCHRIPLQDVAFSNSSHG----AVSADTYTLTRWSTAEEGGWVSMKFGGETVTVTGIALRFADGDTSTYQFHLYGDGNPVLLDQTSSGSTLEAERFDLEDDTALSELTL 500          
BLAST of mRNA_S-firma_F_contig1100.1340.1 vs. uniprot
Match: D8LPI3_ECTSI (EsV-1-164 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPI3_ECTSI)

HSP 1 Score: 402 bits (1033), Expect = 4.480e-130
Identity = 226/523 (43.21%), Postives = 307/523 (58.70%), Query Frame = 1
Query:   64 SVTPKGSIQEALNEAQPGDTVVLGDGEYSQDFRSVRDGTPDKRITITGSRKAVVHGTKRESRMIQIFHSYITLDGFTASGLAPSSQGNLVDDYVDKCVYILGTSPPKVVRENGVEYESSLDGVVVRNMHIKDCGGECLRLRSFITNAEVVGNKIEGCGRHDFKFEST-SKNGEAIYVGTSSNQWDDGKNSRAGPDLSKYIWIHKNIIDAQGNECVDVKEGTTDVLVEYNACSDQRDPNSGCLDSRTDDIIFRYNRISDCEGAGIRIGGHTINGKTYGVNNEIYGNVFKNTTHSSIKVQTGDDHN--LCGNTCDE-C-VLKSKSPALTGIEDTCQTMRDIKWI-------------------------------------------------VKPTNNCKLAKITESSASNHDGNLPGNA-VDGDADTRWSARGDGEWLSVKLQKAVRVESLQMSFYQGDNRQQFFDVYADGKPLLLNAKSSGKTTGLQSFPVPDPTTVTT-VTIVFRGNSKDAWNSVTEVMVC 1464
            +V+P  SIQEA+  AQPGDTV L DGEY++D  +VRDG PDKRIT++G R AV+ GT +ESR+ QI HSY T+DGF   G     +G+  + YVDK +Y  G    +V+R+ G E+ S++DG+++ NM I + GGEC R R F+TN E  G+ +E CG +DF F    S NGE IY+GTSSNQ  DGKN     D +++I IH N+     NE VD KEG   +LVE N CS Q+DPNSGC+DSR+D ++FRYN+I   +GAG+RIGGH +NGK +G+NNE+YGN F      ++K+QTG   +  LC NTC   C V  S S     +E  C  +  I W+                                                  K +  C    I +  AS+ DG    +A +DG A TRWS+ G GEWL + L    ++++++MSF++GD R Q F+V  DGK +L N +S+GKT  L+ FP P     ++ VTI   GNS++ WNS+TEV+VC
Sbjct:   23 TVSPGESIQEAIELAQPGDTVELKDGEYTEDLVTVRDGEPDKRITLSGGRGAVLKGTGKESRLFQIHHSYTTVDGFVLDGKI--GKGDKAEHYVDKGIYAHGNRETRVIRQYGEEFRSAIDGLIISNMKIINFGGECTRFRYFVTNLEFFGSHLENCGVYDFVFNGMKSVNGETIYLGTSSNQISDGKNPSDEIDQTRFIHIHHNVFKGLSNE-VDAKEGAQYILVEENQCSTQKDPNSGCVDSRSDYVVFRYNQIHSNDGAGVRIGGHEVNGKQWGLNNEVYGNTFYGNKEGALKLQTGQKEHPHLCENTCKGGCEVSGSASEGNEDMEKKCSDLMPIFWVDDTKAAPDAVSVGAEASSIGGEPDDAADADTREHEPEADFDAAVEGRAEPKQSGKCFPVPIADVKASSEDGKHTVHAAIDGKALTRWSSLGKGEWLEIDLASPQKIDAIEMSFFKGDERTQSFEVAVDGKNILQNQESNGKTLALERFPFPKAVDASSSVTIEGGGNSQNDWNSMTEVIVC 542          
BLAST of mRNA_S-firma_F_contig1100.1340.1 vs. uniprot
Match: Q8QKV2_ESV1K (EsV-1-164 n=1 Tax=Ectocarpus siliculosus virus 1 (isolate New Zealand/Kaikoura/1988) TaxID=654926 RepID=Q8QKV2_ESV1K)

HSP 1 Score: 374 bits (960), Expect = 3.160e-119
Identity = 213/520 (40.96%), Postives = 293/520 (56.35%), Query Frame = 1
Query:   55 ATISVTPKGSIQEALNEAQPGDTVVLGDGEYSQDFRSVRDGTPDKRITITGSRKAVVHGTKRESRMIQIFHSYITLDGFTASGLAPSSQGNLVDDYVDKCVYILGTSPPKVVRENGVEYESSLDGVVVRNMHIKDCGGECLRLRSFITNAEVVGNKIEGCGRHDFKFES-TSKNGEAIYVGTSSNQWDDGKNSRAGPDLSKYIWIHKNIIDAQGNECVDVKEGTTDVLVEYNACSDQRDPNSGCLDSRTDDIIFRYNRISDCEGAGIRIGGHTINGKTYGVNNEIYGNVFKNTTHSSIKVQTGDD-HNLCGNTC-DECVLK-SKSPALTGIEDTCQTMRDIKWI---------------------------------------------VKPTNNCKLAKITESSASNHDG-NLPGNAVDGDADTRWSARGDGEWLSVKLQKAVRVESLQMSFYQGDNRQQFFDVYADGKPLLLNAKSSGKTTGLQSFPVPDPTTVTTVTIVFRGNSKDAWNSVTEVMVC 1464
            A ++V P  SIQ AL  AQPGDT+ L DGEY +D  +VRDG PDKRI ITGSR AV+ G  +E+R+ Q+ HSYITLDGFT  GL  S  G+   DY D  +YI      + + + G ++ S+ DGV++ NM ++   GEC+R R F++N E+ G +I  CG  DF F    +KNGE IYVGT+  Q  DGK+     D S YI IH N     GNEC   KEG    LVE+N+CS Q+DPNSGC+D+R D  I RYN I + +GAG+RIGGH ++   +G   E+YGN+F +    SI+VQTG++ H +C NTC   C +  S +     IE  C  +  + W+                                                ++ C    I +  AS+ DG +   +AVD  + TRWSA G GEWL +     V++ +++MSF++GD R Q F+V AD K +L   +S+GKT  ++ FP P     ++V I   GNS++ WNS+TEV+VC
Sbjct:   17 AVLTVDPGQSIQAALELAQPGDTIELKDGEYREDLTTVRDGEPDKRIIITGSRDAVLRGGGKEARLFQVMHSYITLDGFTIDGLL-SGNGDAETDYQDMLIYITAHRETREIEQYGTKFRSAQDGVIISNMKLERALGECVRARYFVSNLEIFGCEIADCGIGDFVFGGMAAKNGEVIYVGTAPGQTADGKSPTDEIDHSLYIHIHHNKFTGNGNEC-QFKEGVEYALVEHNSCSTQKDPNSGCVDARNDRTIVRYNEIFENDGAGVRIGGHVVDDHAFGSQCEVYGNIFHSNKEGSIRVQTGENTHKMCENTCRGGCEIGGSAAEGYQDIEGKCDGLMKVFWVDANKAAPLATSTKTATTAVDGGEPEDAEDASEPEFDAAISTQSKESTQSDKCYPVPIKDVDASSEDGKHTVHSAVDNKSLTRWSASGVGEWLQMDFGAKVKINAIEMSFFKGDQRTQDFEVAADDKTVLEKQQSNGKTLAMERFPFPRAVDASSVKITGGGNSENEWNSLTEVIVC 534          
BLAST of mRNA_S-firma_F_contig1100.1340.1 vs. uniprot
Match: UPI0019FF4931 (DUF1565 domain-containing protein n=1 Tax=Chloroflexi bacterium AL-N15 TaxID=2686370 RepID=UPI0019FF4931)

HSP 1 Score: 305 bits (780), Expect = 9.670e-95
Identity = 179/473 (37.84%), Postives = 251/473 (53.07%), Query Frame = 1
Query:   58 TISVTPKGSIQEALNEAQPGDTVVLGDGEYSQDFRSVRDGTPDKRITITGSRKAVVHGTKRESRMIQIFHSYITLDGFTASGLAPSSQGNLVDDYVDKCVYILGTSPPKVVRENGVEYESSLDGVVVRNMHIKDCGGECLRLRSFITNAEVVGNKIEGCGRHDF---KFESTSKNGEAIYVGTSSNQWDDGKNSRAGPDLSKYIWIHKNIIDAQGNECVDVKEGTTDVLVEYNACSDQRDPNSGCLDSRTDDIIFRYNRISDCEGAGIRIGGHTINGKTYGVNNEIYGNVFKNTTHSSIKVQTGDDHNLCGNTCDECVLKSKSPALTGIEDTCQTMRDIKWIVKPTNNCKLAKITESSASNHDGNLPGNAVDGDADTRWSARGDGEWLSVKLQKAVRVESLQMSFYQGDNRQQFFDVYADGKP----LLLNAKSSGKTTGLQSFPVPDPTTVTTVTIVFRGNSKDAWNSVTEV 1455
            T + +P  +IQ+A++ AQPGDT+ L  G Y+QD RS R+GT    IT+ G   A++ G    SR+ +I H Y+TLDGFT  G   SS       Y DK ++++GT           E    + G+ V NM  K+ GGECLRLR F  N E+  +    CG+ D+   ++    KNGEAIY+GTS+NQW DGKN    PD S   W+H N ++ QGNECVD+KEG T  +VEYN C+ Q+D NS  LDSR D   FRYN      G G+R+GG  ++G+ YG NN +Y N+  +     +K        +CGNT             TG +               + +    ++   +AS+ DGN   N +D + +TRWSA+GDG W+   L     V  + ++F++GD R   F +           +    S+G TT LQ+F   D T    V IV  GN+++ WNS+TEV
Sbjct:   48 TSAGSPFQTIQKAVDLAQPGDTINLASGTYNQDIRSRRNGTASAPITLIGPSNAIIKGGGN-SRIFEINHDYLTLDGFTIDGQVSSSL------YRDKLLFVIGT-----------EVRDGVSGLRVLNMTFKNAGGECLRLRYFAQNNEIAYSTFLNCGQDDYPGGEWAGGGKNGEAIYIGTSNNQWGDGKNPTNEPDQSNNNWVHNNFMNTQGNECVDIKEGATGNIVEYNECTGQKDENSAGLDSRGDGNTFRYNETYGNVGGGVRLGGALVDGEQYGKNNNVYDNIIYDNIAGGVKFMVTPQGKICGNTMWNN---------TGGDSFGDFANQFDPKASCSGSAGALEVAAVNASSDDGNGASNTLDNNLNTRWSAQGDGAWIRYDLGSTKTVSYVDVAFHRGDQRVADFQIQVSNNTSNWTTVFTGSSNGNTTALQTFDFAD-TDGRYVRIVGFGNTQNDWNSLTEV 492          
BLAST of mRNA_S-firma_F_contig1100.1340.1 vs. uniprot
Match: UPI00036AEC55 (right-handed parallel beta-helix repeat-containing protein n=1 Tax=Hahella ganghwensis TaxID=286420 RepID=UPI00036AEC55)

HSP 1 Score: 283 bits (725), Expect = 3.220e-88
Identity = 148/304 (48.68%), Postives = 188/304 (61.84%), Query Frame = 1
Query:   73 PKGSIQEALNEAQPGDTVVLGDGEYSQDFRSVRDGTPDKRITITGSRKAVVHGTKRESRMIQIFHSYITLDGFTASGLAPSSQGNLVDDYVDKCVYILGTSPPKVVRENGVEYESSLDGVVVRNMHIKDCGGECLRLRSFITNAEVVGNKIEGCGRHDFKFESTSKNGEAIYVGTSSNQWDDGKNSRAGPDLSKYIWIHKNIIDAQGNECVDVKEGTTDVLVEYNACSDQRDPNSGCLDSRTDDIIFRYNRISDCEGAGIRIGGHTINGKTYGVNNEIYGNVFKNTTHSSIKVQTGDDHNLCGN 984
            P  SI  AL+ AQ GD V L  G Y ++ RSVR G  D  I I GS+ AV+HG   + R+++I HSYI L  FT  G   S  GN ++D+ D  VY+ G  P           +    G V+R M +K+ GGEC+RLR ++T AE+  N    CG +DFKF +  KNGEAIYVGTSSNQWDDGKN   GPD S + WIH N     GNECVD+KEG    LVEYN CS Q+DPNS   DSR D  IFRYN   D +GAG+R+GG+T++G+ YGVNN++YGN+  N   + +K+       +CGN
Sbjct:   55 PLQSINMALSLAQAGDRVYLQPGHYYENVRSVRHGQADMPIIIHGSKSAVLHGA--QGRILEINHSYIHLRNFTIDGQVGS--GNTMEDFRDILVYVKGNEP-----------QQGPTGFVMRAMSLKNAGGECVRLRYYVTEAEIFDNTFYNCGVYDFKFNNGGKNGEAIYVGTSSNQWDDGKNPTGGPDPSNHNWIHHNKFLTNGNECVDIKEGAEYNLVEYNICSGQQDPNSAGFDSRGDHNIFRYNVSHDNKGAGVRLGGNTVDGRQYGVNNQVYGNLLYNNAQAGVKLMAAPQEKVCGN 343          
BLAST of mRNA_S-firma_F_contig1100.1340.1 vs. uniprot
Match: A0A0G0AZ49_9BACT (Secreted protein n=1 Tax=Parcubacteria group bacterium GW2011_GWC2_32_10 TaxID=1618918 RepID=A0A0G0AZ49_9BACT)

HSP 1 Score: 279 bits (714), Expect = 5.140e-84
Identity = 187/525 (35.62%), Postives = 255/525 (48.57%), Query Frame = 1
Query:   73 PKGSIQEALNEAQPGDTVVLGDGEYSQDFRSVRDGTPDKRITITGSRKAVVHGTKRESRMIQIFHSYITLDGFTASGLAPSSQGNLVDDYVDKCVYILGTSPPKVVRENGVEYESSLDGVVVRNMHIKDCGGECLRLRSFITNAEVVGNKIEGCGRHDFKFESTSKNGEAIYVGTSSNQWDDGKNSRAGPDLSKYIWIHKNIIDAQGNECVDVKEGTTDVLVEYNACSDQRDPNSGCLDSRTDDIIFRYNRISDCEGAGIRIGGHTINGKTYGVNNEIYGNVFKNTTHSSIKVQTGDDHNLCGN--------------------TCDECVLK-------------SKSPALTGIEDTCQTMR-------------------DIKWIVKPTNNCKLA---KITESSASNHDGN---LPGNAVDGDADTRWSARGDGEWLSVKLQKAVRVESLQMSFYQGDNRQQFFDVYADGKPL----LLNAKSSGKTTGLQSFPVPDPTTVTTVTIVFRGNSKDAWNSVTEVMV 1461
            P  +IQ+A+N AQPG T+ L  G+Y QD  S R+G+    I+I G + A++ G    SR+I+I H  I + GFT  GL      +    Y D  +Y +G            E ++ + G+ + +M+IK+ GGEC+RL+ F  N E+  N I+ CG +DFKF +  KNGE IY+GT+  Q    KN     D S   +IH N I   GNE VD+KEG+T  +VEYN    Q+D  SG LDSR D  IFRYN +++  GAGIR GG    G  YG NN  YGN   N    + K+Q     N+CGN                     CD  +LK             +  P +    DT  T                     D+ ++V    N ++     I    AS+ D N   +P NA+D + DTRWSA G GEW+  KL +   +  L+++FY+GD RQQ F V               +S G TTG Q F   D T    V I   GN+ + WNS+TEV +
Sbjct:   66 PFKTIQKAVNLAQPGQTIYLLPGQYFQDIVSARNGSLQSPISILGRQDAIIKGAGA-SRVIEINHDNIIISGFTLDGLY--GDASKASGYRDMLIYAVGK-----------ESKNGVTGLKITDMNIKNSGGECIRLKYFAQNNEIANNVIQNCGIYDFKFSAGGKNGEGIYIGTAPEQL--SKNPTLDIDKSNNNYIHNNSIQTNGNEGVDIKEGSTGNIVEYNIIRGQKDSESGGLDSRGDSNIFRYNDVAESLGAGIRFGGDNYKGVQYGKNNIAYGNKITNNKFGAFKIQATPQGNICGNILSGNGSATGDYGSKINFTIACDASILKYDANLVGPKQIVDTTQPVVVDPIDTTTTTTVSTGQGTIDGKTEYYSSNPDVSYLVCSEKNIEVVPKLSINSVQASSFDANEGCVPQNALDDNLDTRWSASGLGEWIEFKLAEVKNIAFLKIAFYKGDLRQQKFYVEVSSNRTDWTKAYIGESRGDTTGFQKFDFTD-TLAKYVRIKGDGNTTNPWNSITEVQI 573          
BLAST of mRNA_S-firma_F_contig1100.1340.1 vs. uniprot
Match: D7G3L7_ECTSI (FirrV-1-B30 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3L7_ECTSI)

HSP 1 Score: 270 bits (689), Expect = 1.050e-82
Identity = 147/318 (46.23%), Postives = 196/318 (61.64%), Query Frame = 1
Query:   55 ATISVTPKGSIQEALNEAQPGDTVVLGDGEYSQDFRSVRDGTPDKRITITGSRK-AVVHGTK---RESRMIQIFHSYITLDGFTASGLAPSSQGNLVDDYVDKCVYIL----GTSPPKVVRENGVEYESSLDGVVVRNMHIKDCGGECLRLRSFITNAEVVGNKIEGCGRHDFKFESTSKNGEAIYVGTSSNQWDDGKNSRAGPDLSKYIWIHKNIIDAQGNECVDVKEGTTDVLVEYNACSDQRDPNSGCLDSRTDDIIFRYNRISDCEGAGIRIGGHTINGKTYGVNNEIYGNVFKNTTHSSIKVQTGDDHNLCGN 984
            ATISV P G +Q AL++A+PGDT+ L  GEY +   +   G  D  ITI G    A+V G +    +   ++I HSY  LD FT  G    S+ N    Y+DKC+Y+          K ++ NG ++ SS++G+V+ NM I +CGGEC+R+R F+T ++V  N+I  CG HDF  +  SKNGE IY+GTSSNQWDDGKN    PD S Y    KN  D QGNE +D+KEG+   +VE N C+ Q+DPNS CLD+R D  IFR+N   D  GAGIRIGGH I+G  YG NNE+Y N+ +N  ++ IK+       +C N
Sbjct:   30 ATISVKP-GGLQSALDKAKPGDTLRLAPGEYWETAVTKTAGREDAYITIEGETYGAIVKGDQDIDNDGYALKIEHSYYRLDRFTIDG--KHSKNN----YIDKCLYVQQNRDNDDKAKKIKFNGHKFRSSINGLVLSNMDINNCGGECVRMRYFVTYSQVYNNRITNCGTHDFVMDGGSKNGEGIYLGTSSNQWDDGKNPSDEPDESSYNHFFKNHFDTQGNEGIDIKEGSRYNIVEDNYCTGQKDPNSACLDARGDSNIFRFNTCEDNLGAGIRIGGHKIDGHQYGQNNEVYENLLENNDYAGIKITMSPQGAVCSN 340          
BLAST of mRNA_S-firma_F_contig1100.1340.1 vs. uniprot
Match: A0A261GHV7_9GAMM (DUF1565 domain-containing protein n=1 Tax=Hahella sp. CCB-MM4 TaxID=1926491 RepID=A0A261GHV7_9GAMM)

HSP 1 Score: 269 bits (688), Expect = 1.490e-82
Identity = 141/304 (46.38%), Postives = 187/304 (61.51%), Query Frame = 1
Query:   73 PKGSIQEALNEAQPGDTVVLGDGEYSQDFRSVRDGTPDKRITITGSRKAVVHGTKRESRMIQIFHSYITLDGFTASGLAPSSQGNLVDDYVDKCVYILGTSPPKVVRENGVEYESSLDGVVVRNMHIKDCGGECLRLRSFITNAEVVGNKIEGCGRHDFKFESTSKNGEAIYVGTSSNQWDDGKNSRAGPDLSKYIWIHKNIIDAQGNECVDVKEGTTDVLVEYNACSDQRDPNSGCLDSRTDDIIFRYNRISDCEGAGIRIGGHTINGKTYGVNNEIYGNVFKNTTHSSIKVQTGDDHNLCGN 984
            P  +I  AL  AQPGD V L +G+Y QD ++VR G   K I I G++ AV+ G +   R++QI H YI L  FT  GL    +GN  +DY    +++ GT           E++   +G V+R+M I++ GGEC+RLR  +T AE+ GN    CG +DF+F+   KNGEAIY+GTSS QWDDGKN  A PD S Y W+H N    +GNECVD+KEG    LVE N C+ Q+DP SG  D+R D  I RYN     +GAGIR+GG+ +NG+ YGV NE+YGN   +  +S IK+ T     +CGN
Sbjct:   60 PFKTINAALEYAQPGDRVYLLEGKYYQDVKTVRSGLRSKPILIQGTKSAVLKG-ENGGRVLQINHDYIHLRNFTIDGLV--GKGNGPEDYRKSLIFVQGT-----------EHKQGPEGFVMRSMRIRNAGGECVRLRYHVTRAEIFGNTFYNCGAYDFQFDGRGKNGEAIYIGTSSEQWDDGKNPSADPDHSNYNWVHHNYFLTRGNECVDIKEGAAHNLVENNICAGQQDPASGGFDARGDYNIIRYNVSYSNKGAGIRVGGNMVNGRQYGVFNEVYGNKIFDNDNSGIKIMTYPQRYVCGN 349          
BLAST of mRNA_S-firma_F_contig1100.1340.1 vs. uniprot
Match: A0A1Y0IFB0_9GAMM (Secreted protein n=2 Tax=Oleiphilus messinensis TaxID=141451 RepID=A0A1Y0IFB0_9GAMM)

HSP 1 Score: 269 bits (687), Expect = 4.170e-82
Identity = 137/304 (45.07%), Postives = 189/304 (62.17%), Query Frame = 1
Query:   73 PKGSIQEALNEAQPGDTVVLGDGEYSQDFRSVRDGTPDKRITITGSRKAVVHGTKRESRMIQIFHSYITLDGFTASGLAPSSQGNLVDDYVDKCVYILGTSPPKVVRENGVEYESSLDGVVVRNMHIKDCGGECLRLRSFITNAEVVGNKIEGCGRHDFKFESTSKNGEAIYVGTSSNQWDDGKNSRAGPDLSKYIWIHKNIIDAQGNECVDVKEGTTDVLVEYNACSDQRDPNSGCLDSRTDDIIFRYNRISDCEGAGIRIGGHTINGKTYGVNNEIYGNVFKNTTHSSIKVQTGDDHNLCGN 984
            P   I  AL+ A+PG+ V L  GEY +D ++VR GTPD+ I I GS+KA+V G ++ +R+ QIFHSYI L  F+  G      GN ++D+ D  V++            G E +S   GVV+R+M +++ GGEC+RL+ F+T AE+ GN I  CG +DF+F +  KNGE IY+GT+  QWD+GKN  A PD S   W+  N     GNECVD+KEG    L+EYNAC +Q DPNSG  D+R D+ IFRYN      GAG+R+GG    G+ YG+NN++YGN+     H+ +KV +     +C N
Sbjct:   76 PLRYINTALSYAEPGERVYLMPGEYFEDIKTVRSGTPDQPILIYGSKKAIVKGAQK-NRIFQIFHSYIHLRNFSIDGKV--GAGNAIEDFRDILVWV-----------QGQEIKSGPKGVVLRSMILQNAGGECVRLKYFVTQAEIFGNLIRNCGVYDFQFAAGGKNGEGIYIGTAPEQWDNGKNPSADPDHSNGNWVWGNKFYTYGNECVDIKEGAEYNLIEYNACQNQLDPNSGGFDARGDNNIFRYNIAHTNTGAGVRLGGDLHQGRQYGINNQVYGNIIYGNGHAGVKVMSYPQDQICSN 365          
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig1100.1340.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
B5LWC7_9PHYC2.340e-17052.61Putative nosD copper-binding protein n=1 Tax=Feldm... [more]
Q6XM06_9PHYC5.110e-15049.27FirrV-1-B30 n=1 Tax=Feldmannia irregularis virus a... [more]
D8LPI3_ECTSI4.480e-13043.21EsV-1-164 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
Q8QKV2_ESV1K3.160e-11940.96EsV-1-164 n=1 Tax=Ectocarpus siliculosus virus 1 (... [more]
UPI0019FF49319.670e-9537.84DUF1565 domain-containing protein n=1 Tax=Chlorofl... [more]
UPI00036AEC553.220e-8848.68right-handed parallel beta-helix repeat-containing... [more]
A0A0G0AZ49_9BACT5.140e-8435.62Secreted protein n=1 Tax=Parcubacteria group bacte... [more]
D7G3L7_ECTSI1.050e-8246.23FirrV-1-B30 n=1 Tax=Ectocarpus siliculosus TaxID=2... [more]
A0A261GHV7_9GAMM1.490e-8246.38DUF1565 domain-containing protein n=1 Tax=Hahella ... [more]
A0A1Y0IFB0_9GAMM4.170e-8245.07Secreted protein n=2 Tax=Oleiphilus messinensis Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_F_contig1100contigS-firma_F_contig1100:19442..20905 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef902022-09-19
OGS1.0 of Sphaerotrichia firma ET2_F female2021-02-24
Properties
Property NameValue
Seed ortholog1121935.AQXX01000136_gene4114
PFAMsBeta_helix,DUF1565
Max annot lvl1236|Gammaproteobacteria
Evalue5.28e-89
EggNOG OGsCOG3420@1|root,COG3420@2|Bacteria,1NHJ7@1224|Proteobacteria,1SHNB@1236|Gammaproteobacteria
DescriptionParallel beta-helix repeats
COG categoryP
Hectar predicted targeting categorysignal peptide
Exons1
Model size1464
Cds size1464
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815647.8150568-CDS-S-firma_F_contig1100:19441..209051622815647.8150568-CDS-S-firma_F_contig1100:19441..20905Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig1100 19442..20905 -
1696949477.365975-CDS-S-firma_F_contig1100:19441..209051696949477.365975-CDS-S-firma_F_contig1100:19441..20905Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig1100 19442..20905 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_F_contig1100.1340.1prot_S-firma_F_contig1100.1340.1Sphaerotrichia firma ET2_F femalepolypeptideS-firma_F_contig1100 19442..20905 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-firma_F_contig1100.1340.1

>prot_S-firma_F_contig1100.1340.1 ID=prot_S-firma_F_contig1100.1340.1|Name=mRNA_S-firma_F_contig1100.1340.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=488bp
MHLFRFLLVLGLRLHAECATISVTPKGSIQEALNEAQPGDTVVLGDGEYS
QDFRSVRDGTPDKRITITGSRKAVVHGTKRESRMIQIFHSYITLDGFTAS
GLAPSSQGNLVDDYVDKCVYILGTSPPKVVRENGVEYESSLDGVVVRNMH
IKDCGGECLRLRSFITNAEVVGNKIEGCGRHDFKFESTSKNGEAIYVGTS
SNQWDDGKNSRAGPDLSKYIWIHKNIIDAQGNECVDVKEGTTDVLVEYNA
CSDQRDPNSGCLDSRTDDIIFRYNRISDCEGAGIRIGGHTINGKTYGVNN
EIYGNVFKNTTHSSIKVQTGDDHNLCGNTCDECVLKSKSPALTGIEDTCQ
TMRDIKWIVKPTNNCKLAKITESSASNHDGNLPGNAVDGDADTRWSARGD
GEWLSVKLQKAVRVESLQMSFYQGDNRQQFFDVYADGKPLLLNAKSSGKT
TGLQSFPVPDPTTVTTVTIVFRGNSKDAWNSVTEVMVC
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mRNA from alignment at S-firma_F_contig1100:19442..20905-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-firma_F_contig1100.1340.1 ID=mRNA_S-firma_F_contig1100.1340.1|Name=mRNA_S-firma_F_contig1100.1340.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=1464bp|location=Sequence derived from alignment at S-firma_F_contig1100:19442..20905- (Sphaerotrichia firma ET2_F female)
ATGCACTTGTTCAGGTTTCTTCTCGTTCTCGGACTTCGACTCCACGCAGA ATGCGCAACGATCAGTGTCACACCCAAGGGCTCCATCCAGGAAGCTCTAA ACGAAGCACAACCGGGCGACACCGTCGTCCTGGGGGATGGCGAATACTCG CAGGACTTCAGGTCTGTCCGGGACGGGACCCCGGACAAGAGGATCACGAT CACGGGGTCTCGGAAGGCTGTGGTACACGGGACGAAGAGAGAGTCTCGTA TGATTCAGATCTTTCACTCGTACATCACGCTCGACGGGTTCACGGCAAGC GGTTTGGCCCCGTCGTCTCAAGGCAACCTTGTCGACGACTATGTGGACAA GTGCGTCTACATCCTGGGCACGAGTCCACCCAAAGTTGTCCGTGAGAATG GCGTGGAGTACGAATCCTCTCTCGACGGCGTCGTCGTGCGCAACATGCAC ATCAAGGACTGCGGGGGGGAATGCCTGCGCCTCCGCAGCTTCATCACCAA CGCCGAGGTGGTCGGGAACAAGATTGAGGGGTGCGGCCGCCACGACTTCA AGTTCGAGTCGACCTCCAAGAACGGCGAGGCCATCTACGTCGGGACAAGC TCCAACCAGTGGGACGACGGCAAGAACTCCAGGGCGGGCCCAGACCTGTC CAAGTATATCTGGATCCACAAGAACATCATCGACGCACAGGGAAACGAGT GTGTGGACGTCAAGGAGGGCACCACGGACGTGCTCGTCGAGTACAACGCG TGCTCGGACCAGAGGGACCCGAACTCGGGGTGCCTGGACTCTAGGACGGA CGACATCATCTTCCGCTACAACCGGATTTCCGACTGCGAAGGGGCCGGGA TTCGCATCGGGGGTCACACCATCAACGGTAAAACCTACGGTGTCAACAAC GAGATTTATGGCAACGTCTTCAAAAATACGACCCACTCTTCCATCAAGGT CCAGACCGGGGACGACCACAACCTGTGTGGGAACACGTGCGATGAGTGCG TCTTGAAGTCCAAGTCTCCCGCTCTGACGGGAATCGAGGATACATGCCAG ACCATGAGAGACATCAAGTGGATTGTGAAGCCGACTAACAACTGTAAGCT GGCCAAGATCACAGAATCCTCTGCTTCCAATCACGACGGAAACTTACCTG GCAATGCCGTCGACGGGGATGCTGACACACGCTGGTCAGCCAGGGGGGAT GGGGAGTGGTTGTCGGTGAAGTTGCAGAAGGCTGTCAGGGTGGAATCCCT CCAGATGAGCTTCTACCAAGGAGACAACCGACAGCAATTCTTCGATGTGT ACGCCGACGGAAAACCGCTCCTGCTCAACGCCAAGTCTTCCGGGAAAACC ACCGGACTCCAGTCGTTCCCCGTACCCGACCCCACGACAGTGACGACGGT GACCATCGTCTTCCGGGGAAATTCGAAAGACGCTTGGAACAGCGTCACGG AAGTCATGGTTTGC
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Coding sequence (CDS) from alignment at S-firma_F_contig1100:19442..20905-

>mRNA_S-firma_F_contig1100.1340.1 ID=mRNA_S-firma_F_contig1100.1340.1|Name=mRNA_S-firma_F_contig1100.1340.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=2928bp|location=Sequence derived from alignment at S-firma_F_contig1100:19442..20905- (Sphaerotrichia firma ET2_F female)
ATGCACTTGTTCAGGTTTCTTCTCGTTCTCGGACTTCGACTCCACGCAGA
ATGCGCAACGATCAGTGTCACACCCAAGGGCTCCATCCAGGAAGCTCTAA
ACGAAGCACAACCGGGCGACACCGTCGTCCTGGGGGATGGCGAATACTCG
CAGGACTTCAGGTCTGTCCGGGACGGGACCCCGGACAAGAGGATCACGAT
CACGGGGTCTCGGAAGGCTGTGGTACACGGGACGAAGAGAGAGTCTCGTA
TGATTCAGATCTTTCACTCGTACATCACGCTCGACGGGTTCACGGCAAGC
GGTTTGGCCCCGTCGTCTCAAGGCAACCTTGTCGACGACTATGTGGACAA
GTGCGTCTACATCCTGGGCACGAGTCCACCCAAAGTTGTCCGTGAGAATG
GCGTGGAGTACGAATCCTCTCTCGACGGCGTCGTCGTGCGCAACATGCAC
ATCAAGGACTGCGGGGGGGAATGCCTGCGCCTCCGCAGCTTCATCACCAA
CGCCGAGGTGGTCGGGAACAAGATTGAGGGGTGCGGCCGCCACGACTTCA
AGTTCGAGTCGACCTCCAAGAACGGCGAGGCCATCTACGTCGGGACAAGC
TCCAACCAGTGGGACGACGGCAAGAACTCCAGGGCGGGCCCAGACCTGTC
CAAGTATATCTGGATCCACAAGAACATCATCGACGCACAGGGAAACGAGT
GTGTGGACGTCAAGGAGGGCACCACGGACGTGCTCGTCGAGTACAACGCG
TGCTCGGACCAGAGGGACCCGAACTCGGGGTGCCTGGACTCTAGGACGGA
CGACATCATCTTCCGCTACAACCGGATTTCCGACTGCGAAGGGGCCGGGA
TTCGCATCGGGGGTCACACCATCAACGGTAAAACCTACGGTGTCAACAAC
GAGATTTATGGCAACGTCTTCAAAAATACGACCCACTCTTCCATCAAGGT
CCAGACCGGGGACGACCACAACCTGTGTGGGAACACGTGCGATGAGTGCG
TCTTGAAGTCCAAGTCTCCCGCTCTGACGGGAATCGAGGATACATGCCAG
ACCATGAGAGACATCAAGTGGATTGTGAAGCCGACTAACAACTGTAAGCT
GGCCAAGATCACAGAATCCTCTGCTTCCAATCACGACGGAAACTTACCTG
GCAATGCCGTCGACGGGGATGCTGACACACGCTGGTCAGCCAGGGGGGAT
GGGGAGTGGTTGTCGGTGAAGTTGCAGAAGGCTGTCAGGGTGGAATCCCT
CCAGATGAGCTTCTACCAAGGAGACAACCGACAGCAATTCTTCGATGTGT
ACGCCGACGGAAAACCGCTCCTGCTCAACGCCAAGTCTTCCGGGAAAACC
ACCGGACTCCAGTCGTTCCCCGTACCCGACCCCACGACAGTGACGACGGT
GACCATCGTCTTCCGGGGAAATTCGAAAGACGCTTGGAACAGCGTCACGG
AAGTCATGGTTTGCATGCACTTGTTCAGGTTTCTTCTCGTTCTCGGACTT
CGACTCCACGCAGAATGCGCAACGATCAGTGTCACACCCAAGGGCTCCAT
CCAGGAAGCTCTAAACGAAGCACAACCGGGCGACACCGTCGTCCTGGGGG
ATGGCGAATACTCGCAGGACTTCAGGTCTGTCCGGGACGGGACCCCGGAC
AAGAGGATCACGATCACGGGGTCTCGGAAGGCTGTGGTACACGGGACGAA
GAGAGAGTCTCGTATGATTCAGATCTTTCACTCGTACATCACGCTCGACG
GGTTCACGGCAAGCGGTTTGGCCCCGTCGTCTCAAGGCAACCTTGTCGAC
GACTATGTGGACAAGTGCGTCTACATCCTGGGCACGAGTCCACCCAAAGT
TGTCCGTGAGAATGGCGTGGAGTACGAATCCTCTCTCGACGGCGTCGTCG
TGCGCAACATGCACATCAAGGACTGCGGGGGGGAATGCCTGCGCCTCCGC
AGCTTCATCACCAACGCCGAGGTGGTCGGGAACAAGATTGAGGGGTGCGG
CCGCCACGACTTCAAGTTCGAGTCGACCTCCAAGAACGGCGAGGCCATCT
ACGTCGGGACAAGCTCCAACCAGTGGGACGACGGCAAGAACTCCAGGGCG
GGCCCAGACCTGTCCAAGTATATCTGGATCCACAAGAACATCATCGACGC
ACAGGGAAACGAGTGTGTGGACGTCAAGGAGGGCACCACGGACGTGCTCG
TCGAGTACAACGCGTGCTCGGACCAGAGGGACCCGAACTCGGGGTGCCTG
GACTCTAGGACGGACGACATCATCTTCCGCTACAACCGGATTTCCGACTG
CGAAGGGGCCGGGATTCGCATCGGGGGTCACACCATCAACGGTAAAACCT
ACGGTGTCAACAACGAGATTTATGGCAACGTCTTCAAAAATACGACCCAC
TCTTCCATCAAGGTCCAGACCGGGGACGACCACAACCTGTGTGGGAACAC
GTGCGATGAGTGCGTCTTGAAGTCCAAGTCTCCCGCTCTGACGGGAATCG
AGGATACATGCCAGACCATGAGAGACATCAAGTGGATTGTGAAGCCGACT
AACAACTGTAAGCTGGCCAAGATCACAGAATCCTCTGCTTCCAATCACGA
CGGAAACTTACCTGGCAATGCCGTCGACGGGGATGCTGACACACGCTGGT
CAGCCAGGGGGGATGGGGAGTGGTTGTCGGTGAAGTTGCAGAAGGCTGTC
AGGGTGGAATCCCTCCAGATGAGCTTCTACCAAGGAGACAACCGACAGCA
ATTCTTCGATGTGTACGCCGACGGAAAACCGCTCCTGCTCAACGCCAAGT
CTTCCGGGAAAACCACCGGACTCCAGTCGTTCCCCGTACCCGACCCCACG
ACAGTGACGACGGTGACCATCGTCTTCCGGGGAAATTCGAAAGACGCTTG
GAACAGCGTCACGGAAGTCATGGTTTGC
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