mRNA_S-firma_F_contig10998.1313.1 (mRNA) Sphaerotrichia firma ET2_F female
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Overview
Homology
BLAST of mRNA_S-firma_F_contig10998.1313.1 vs. uniprot
Match: A0A024U1N5_9STRA (Uncharacterized protein n=3 Tax=Aphanomyces TaxID=100860 RepID=A0A024U1N5_9STRA) HSP 1 Score: 132 bits (331), Expect = 1.790e-33 Identity = 63/125 (50.40%), Postives = 85/125 (68.00%), Query Frame = 1
Query: 7 GSKMVFFGGWDG-KKSFNDLWVYDTDAKTWIKPKVSGSPPSPRHGHSSQLTSDGRILVYGGWAWNEEGSPTFCSDVRQLDTETMIWGRCRITGDLPSAGRYAH-GTCMLGDLMVMFGGFTGADRK 375
G+K+V FGGWDG K+F DLWV+DT++ WIKPKV+G+PP+PRHGH+ L DGRILV+GG+ + +DV LDTETM+W R R TGD P G + H T + G + + GG++G +R
Sbjct: 111 GNKLVIFGGWDGTNKTFKDLWVFDTESFAWIKPKVTGTPPTPRHGHTMVLLEDGRILVFGGYV-----DTHYFNDVYTLDTETMVWTRPRTTGDFP-VGTFGHTATVVDGCKLYVVGGWSGTERS 229
BLAST of mRNA_S-firma_F_contig10998.1313.1 vs. uniprot
Match: A0A8K1FKE0_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FKE0_PYTOL) HSP 1 Score: 126 bits (317), Expect = 6.410e-31 Identity = 54/124 (43.55%), Postives = 77/124 (62.10%), Query Frame = 1
Query: 1 IQGSKMVFFGGWDGKKSFNDLWVYDTDAKTWIKPKVSGSPPSPRHGHSSQLTSDGRILVYGGWAWNEEGSPTFCSDVRQLDTETMIWGRCRITGDLPSAGRYAHGTCMLGDLMVMFGGFTGADR 372
+ M+FFGGWDGKKS NDLW +DT+ TW KPK +G PP+PR HS + ++VYGG+ E P + D+ LDTET+ W R R+TG+ P G + C+ +L ++ GG++G +R
Sbjct: 170 VDDQNMLFFGGWDGKKSMNDLWSFDTNTFTWHKPKCTGKPPTPRQDHSMLPIATDLVMVYGGYTVLPEALPAYNKDIFLLDTETLSWSRPRLTGEYP-LGTFGQTVCLQNELALLLGGWSGTER 292
BLAST of mRNA_S-firma_F_contig10998.1313.1 vs. uniprot
Match: A0A7S1UIK9_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UIK9_9STRA) HSP 1 Score: 124 bits (311), Expect = 1.620e-30 Identity = 58/120 (48.33%), Postives = 77/120 (64.17%), Query Frame = 1
Query: 1 IQGSKMVFFGGWDGK-KSFNDLWVYDTDAKTWIKPKVSGSPPSPRHGHSSQLTSDGRILVYGGWAWNEEGSPTFCSDVRQLDTETMIWGRCRITGDLPSAGRYAHGTCMLGDLMVMFGGF 357
+ G K+V GGWDG + D WV+DT TWI+P++SG PPSPRHGH+ L DGRI+ +GG + G P + D RQLD E M W + R +G LPSA R H +LG+ +V+FGG+
Sbjct: 141 LVGRKIVLHGGWDGNTRCMGDTWVFDTATFTWIQPRISGLPPSPRHGHTLNLLPDGRIVCFGGAGVDNMGVPLYYDDFRQLDPEKMQWSKVRSSGMLPSA-RMGHTCVLLGNRLVLFGGW 259
BLAST of mRNA_S-firma_F_contig10998.1313.1 vs. uniprot
Match: A0A067BWJ1_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067BWJ1_SAPPC) HSP 1 Score: 124 bits (311), Expect = 3.480e-30 Identity = 58/126 (46.03%), Postives = 85/126 (67.46%), Query Frame = 1
Query: 7 GSKMVFFGGWDGK-KSFNDLWVYDTDAKTWIKPKVSGSPPSPRHGHSSQLTSDGRILVYGGWAWNE--EGSPTFCSDVRQLDTETMIWGRCRITGDLPSAGRYAHGTCMLGDLMVMFGGFTGADRK 375
G+K+VFFGGWDG+ K+F DLWV+DT+ W++P V+G+PP+ R+GHS L DGRI++YGG + E + +D+ LDTETM W R R+TGD P ++H M+G + + GG++G +R
Sbjct: 151 GTKLVFFGGWDGQNKTFKDLWVFDTETFAWLQPHVAGTPPTARYGHSMALLDDGRIVLYGGQSVKTVPEVRVEYFNDLYTLDTETMAWMRPRVTGDQPIP-TFSHTMTMVGRTLYIVGGWSGTERS 275
BLAST of mRNA_S-firma_F_contig10998.1313.1 vs. uniprot
Match: A0A485L7W0_9STRA (Aste57867_17468 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L7W0_9STRA) HSP 1 Score: 122 bits (305), Expect = 3.650e-29 Identity = 63/150 (42.00%), Postives = 84/150 (56.00%), Query Frame = 1
Query: 7 GSKMVFFGG----------------------WDGK-KSFNDLWVYDTDAKTWIKPKVSGSPPSPRHGHSSQLTSDGRILVYGGWAWNEEG----SPTFCSDVRQLDTETMIWGRCRITGDLPSAGRYAHGTCMLGDLMVMFGGFTGADRK 375
G+K+V FGG WDG K++ DLWV+DT++ WIKPKV+G+PP+PRHGH+ L DGRILV+GG+ G S + DV LDTETM W R R GD P G + H T + G + + GG++G +R
Sbjct: 148 GTKLVIFGGYSPLNPSDSTSDSVSDSNGQRRWDGSSKTYKDLWVFDTESFAWIKPKVTGTPPTPRHGHTMSLLEDGRILVFGGYMLQTSGGGDISGEYHKDVYTLDTETMAWTRPRTMGDFP-LGTFGHTTSLDGQKLYVVGGWSGTERS 296
BLAST of mRNA_S-firma_F_contig10998.1313.1 vs. uniprot
Match: A0A1V9YGE9_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YGE9_9STRA) HSP 1 Score: 121 bits (303), Expect = 4.540e-29 Identity = 57/126 (45.24%), Postives = 84/126 (66.67%), Query Frame = 1
Query: 7 GSKMVFFGGWDGK-KSFNDLWVYDTDAKTWIKPKVSGSPPSPRHGHSSQLTSDGRILVYGGWAWN--EEGSPTFCSDVRQLDTETMIWGRCRITGDLPSAGRYAHGTCMLGDLMVMFGGFTGADRK 375
G+K+V+FGGWDG+ K++ DLWV+DT+ WI+PKV+G+PP+ R+GH+ L DGRI++YGG + + + +DV LDTETM W R RITGD P + H + G + + GG++G +R
Sbjct: 144 GTKLVYFGGWDGQNKTYKDLWVFDTETFAWIQPKVAGTPPTARYGHTMGLLDDGRIVLYGGQSVKMLPQVGVEYFNDVYMLDTETMAWTRPRITGDQP-VPTFGHRMIIDGRTVYVVGGWSGTERS 268
BLAST of mRNA_S-firma_F_contig10998.1313.1 vs. uniprot
Match: K3WMT4_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WMT4_GLOUD) HSP 1 Score: 115 bits (287), Expect = 1.380e-26 Identity = 54/127 (42.52%), Postives = 75/127 (59.06%), Query Frame = 1
Query: 1 IQGSKMVFFGGWDGKKSFNDLWVYDTDAKTWIKPKVSGSPPSPRHGHSSQLTSDGRILVYGGWA--WNEEGSPTFCSDVRQLDTETMIWGRCRITGDLPSAGRYAHGTCMLGDLMVMFGGFTGADRK 375
I ++MV FGGWDGKKS NDLW++DT+ TW KPK +G P+ RH HS S +LVYGG+ + P + DV LDT T+ W R R+ G+ P G + + +L +FGG++G +R
Sbjct: 167 IDDARMVLFGGWDGKKSMNDLWIFDTNTFTWTKPKCAGKFPTSRHNHSMVAISRETLLVYGGYTVLMPDVPLPVYNKDVYLLDTTTLTWSRPRLVGEYP-LGTFGQSVNVHDELAFVFGGWSGTERS 292
BLAST of mRNA_S-firma_F_contig10998.1313.1 vs. uniprot
Match: F0YHJ5_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YHJ5_AURAN) HSP 1 Score: 110 bits (276), Expect = 1.860e-25 Identity = 52/111 (46.85%), Postives = 73/111 (65.77%), Query Frame = 1
Query: 31 GWDGKKS-FNDLWVYDTDAKTWIKPKVSGSPPSPRHGHSSQLTSDGRILVYGGWAWN-EEGSPTFCSDVRQLDTETMIWGRCRITGDLPSAGRYAHGTCMLGDLMVMFGGF 357
GWDG+ DLWV+++D TW++PK +G PSPR+GH+ L SDGRIL YGG + ++ P + +D+RQLDTETMIW + I G P + RY H T + + +FGG+
Sbjct: 139 GWDGRTHCMGDLWVFNSDTFTWVQPKSAGILPSPRYGHTLDLLSDGRILCYGGCNVSLKDPVPEYYNDLRQLDTETMIWTKPAIGGSCPPSKRYGHATAHMDFGLALFGGW 249
BLAST of mRNA_S-firma_F_contig10998.1313.1 vs. uniprot
Match: A0A7S2V314_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V314_9STRA) HSP 1 Score: 107 bits (267), Expect = 1.940e-25 Identity = 52/114 (45.61%), Postives = 73/114 (64.04%), Query Frame = 1
Query: 58 DLWVYDTDAKTWIKPKVSGSPPSPRHGHSSQLTSDGRILVYGGWAWNEEGS--PTFCSDVRQLDTETMIWGRCRITGDLPSAGRYAHGTCM--LGDLMVMFGGFTGADRKDAAE 387
DLWV+DTD+ TW+KP+V G P PR+GH+ L DGR+LV+GG E+G P + SD+RQLDTETM W + R TG + +GR H + +G +V+FGG+ +D +
Sbjct: 8 DLWVFDTDSFTWVKPRVGGLAPEPRYGHTLNLLPDGRLLVFGGMGLVEDGGFLPVYHSDLRQLDTETMQWSKPRRTG-VSVSGRMGHSATLAGIGSTVVVFGGWGLGGVQDRTQ 120
BLAST of mRNA_S-firma_F_contig10998.1313.1 vs. uniprot
Match: A0A8J2SKS0_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SKS0_9STRA) HSP 1 Score: 109 bits (273), Expect = 5.300e-25 Identity = 51/120 (42.50%), Postives = 77/120 (64.17%), Query Frame = 1
Query: 31 GWDGK-KSFNDLWVYDTDAKTWIKPKVSGSPPSPRHGHSSQLTSDGRILVYGGWAWNEEGS-PTFCSDVRQLDTETMIWGRCRITGDLPSAGRYAHGTCMLGDLMVMFGGFTGADRKDAA 384
GWDG + DLWV+++D TW++P+ +G PSPR+GHS L +DGRIL +GG + P + +D+RQLDTETMIW + I G P + R+ H T +G+ +++FGG+ ++ A
Sbjct: 147 GWDGHMQCMGDLWVFNSDTFTWVQPRCAGIQPSPRYGHSLSLLTDGRILCFGGCTVSSIFPVPQYHNDLRQLDTETMIWTKSTIQGGEPPSKRHGHTTTKVGNGLIVFGGWGSGGLQNRA 266 The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10998.1313.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-firma_F_contig10998.1313.1 >prot_S-firma_F_contig10998.1313.1 ID=prot_S-firma_F_contig10998.1313.1|Name=mRNA_S-firma_F_contig10998.1313.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=176bp MVFFGGWDGKKSFNDLWVYDTDAKTWIKPKVSGSPPSPRHGHSSQLTSDGback to top mRNA from alignment at S-firma_F_contig10998:3995..4795- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-firma_F_contig10998.1313.1 ID=mRNA_S-firma_F_contig10998.1313.1|Name=mRNA_S-firma_F_contig10998.1313.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=801bp|location=Sequence derived from alignment at S-firma_F_contig10998:3995..4795- (Sphaerotrichia firma ET2_F female)back to top Coding sequence (CDS) from alignment at S-firma_F_contig10998:3995..4795- >mRNA_S-firma_F_contig10998.1313.1 ID=mRNA_S-firma_F_contig10998.1313.1|Name=mRNA_S-firma_F_contig10998.1313.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=1056bp|location=Sequence derived from alignment at S-firma_F_contig10998:3995..4795- (Sphaerotrichia firma ET2_F female)back to top |