mRNA_S-firma_F_contig10995.1311.1 (mRNA) Sphaerotrichia firma ET2_F female
|
Overview
Homology
BLAST of mRNA_S-firma_F_contig10995.1311.1 vs. uniprot
Match: D8LQP1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQP1_ECTSI) HSP 1 Score: 239 bits (610), Expect = 8.370e-73 Identity = 149/175 (85.14%), Postives = 159/175 (90.86%), Query Frame = 1
Query: 1 QINVKIEEIKELRSAHRAKLDQWYNSRRERNKFKKALLKAEWVERVAAKTARTKALEEEEAKKIPYESEMVLCDTLVQYLETTFLKAS-DAPKAAAVAAPQAATNAEFGGMKMVMKKRQDEEFIVMGGGKKKGXXXXXXXXXXXXXXXXTIVHAIDTMESFSMLSIAPPANKVSL 522
+INVKIEEIK+LRSAHRAKLD WYN RRER KFK+AL KAEW+ERVAAK A TKALEEEEAKKIPYESE+VLCDTLV YLETTF+ +APKAAAV APQAATN EF GMKMVMKKRQDEEFIVMGGG+KKGXXXXXXXXXXXXXXXXTIVHAIDTMESFSMLSIAPP NK ++
Sbjct: 227 EINVKIEEIKDLRSAHRAKLDHWYNCRRERTKFKRALHKAEWLERVAAKNAHTKALEEEEAKKIPYESEIVLCDTLVSYLETTFMNVKGEAPKAAAVVAPQAATNDEFKGMKMVMKKRQDEEFIVMGGGRKKGXXXXXXXXXXXXXXXXTIVHAIDTMESFSMLSIAPPPNKAAV 401
BLAST of mRNA_S-firma_F_contig10995.1311.1 vs. uniprot
Match: A0A835Z8L9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8L9_9STRA) HSP 1 Score: 76.6 bits (187), Expect = 4.160e-13 Identity = 55/134 (41.04%), Postives = 81/134 (60.45%), Query Frame = 1
Query: 1 QINVKIEEIKELRSAHRAKLDQWYNSRRERNKFKKALLKAEWVERVAAKTARTKALEEEEAKKIPYESEMVLCDTLVQYLETTFLKASDAPKAAAVAAPQAATNA----EFGGMKMVMKKRQDEEFIVMGGGKK 390
+I K++ +EL +A + +++ + RE+ + ++ + K E+ R AA R + +EEEEAKKIPYE EM LCD L YL +F+ A +AAA AA + A A EF G + +KKR +EEF V+ GGKK
Sbjct: 351 EIGAKMDAQRELYAAFKDANEKFGAAIREQRQLREHIKKLEFEARRAAALERKRLIEEEEAKKIPYEEEMALCDQLATYLTVSFMP-KPAKEAAAAAADKPAEKAPESDEFEGKTLRIKKRDEEEFFVVKGGKK 483
BLAST of mRNA_S-firma_F_contig10995.1311.1 vs. uniprot
Match: A0A7S2CSJ1_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CSJ1_9STRA) HSP 1 Score: 75.5 bits (184), Expect = 1.080e-12 Identity = 62/177 (35.03%), Postives = 92/177 (51.98%), Query Frame = 1
Query: 1 QINVKIEEIKELRSAHRAKLDQWYNSRRERNKFKKALLKAEWVERVAAKTARTKALEEEEAKKIPYESEMVLCDTLVQYLETTFLKASDAPKAAAVAAPQA---ATNAEFGGMKMVMKKRQDEEFIVMGGGKKKGXXXXXXXXXXXXXXXXTIVHAIDTMESFSMLSIAPPANKVSL 522
Q +K +EI+ L + K W ++ E +K + KA ER + EEE AKKIPYE EM LCD L+ YL T FL +S A ++ + ++ A++ F GM++V K + E ++ +GG KKKG IV +IDT+E+FS+L + PPA S+
Sbjct: 259 QKKIKQDEIQVLWDEFKQKNVAWKENQNEWKVYKISRDKAFEEERREQREKLRLEREEEYAKKIPYEEEMQLCDYLLGYLTTNFLNSSAADSSSETQSNESNNTASSKVFEGMQVVGKSDKSENYLALGGKKKKGGKKGPKRIKNDK-----IVLSIDTIETFSLLKLEPPATLTSV 430
BLAST of mRNA_S-firma_F_contig10995.1311.1 vs. uniprot
Match: B7G935_PHATC (Lipoprotein, type 6 n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G935_PHATC) HSP 1 Score: 74.3 bits (181), Expect = 2.710e-12 Identity = 62/172 (36.05%), Postives = 84/172 (48.84%), Query Frame = 1
Query: 1 QINVKIEEIKELRSAHRAKLDQWYNSRRERNKFKKALLKAEWVERVAAKTARTKALEEEEAKKIPYESEMVLCDTLVQYLETTFL-KASDAPKAAAVAAPQAATNAE-FGGMKMVMKKRQDEEFIVMGGGKKKGXXXXXXXXXXXXXXXXTIVHAIDTMESFSMLSIAPPAN 510
+I K++E LR A+R +++YN +R KK + E R A K A +EEEEAKKIPYE E LC+ L +LE T+L K D K A+ A + F G+K V KK DEE+ G KKK ++DT E F +LS+ PP +
Sbjct: 261 KIGEKLKEKDALRDAYRLLNNKFYNFQRAIRAQKKIQYEEEKEARDAEKAAYLAKVEEEEAKKIPYEEEQALCEFLANFLERTYLSKPGDEAKTASENKDVVAVKDDPFAGLKPVSKKDADEEYFGKGKAKKK----RTRATKNQDTSSGPFTLSVDTFEQFGLLSLNPPTS 428
BLAST of mRNA_S-firma_F_contig10995.1311.1 vs. uniprot
Match: A0A7S2UVN4_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UVN4_9STRA) HSP 1 Score: 72.8 bits (177), Expect = 9.330e-12 Identity = 67/126 (53.17%), Postives = 80/126 (63.49%), Query Frame = 1
Query: 166 LEEEEAKKIPYESEMVLCDTLVQYLETTFLKASDAPKAAAVA----APQAA-TNAEFGGMKMVMKKRQD--EEFIVMGGGKKKGXXXXXXXXXXXXXXXXTIVHAIDTMESFSMLSIAPPANKVSL 522
LE EE K+PYE EM LCDTLV YLE L + DAP AP A ++ +F GM + KR D E+ GGGKKKG XXXXXXXXXXX IVHAIDT+ESF++LS+ PPAN ++
Sbjct: 298 LEAEELLKVPYEEEMTLCDTLVAYLEK--LGSPDAPPPPPAQDQGPAPCATHSSMDFDGMVLKAHKRDDDDEQLWGTGGGKKKGKKXXXXXXXXXXXKDQ-IVHAIDTLESFALLSLDPPANTAAV 420
BLAST of mRNA_S-firma_F_contig10995.1311.1 vs. uniprot
Match: A0A7S3Q925_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q925_9STRA) HSP 1 Score: 67.0 bits (162), Expect = 9.250e-10 Identity = 58/156 (37.18%), Postives = 75/156 (48.08%), Query Frame = 1
Query: 61 DQWYNSRRERNKFKKALLKAEWVERVAAKTARTKALEEEEAKKIPYESEMVLCDTLVQYLETTFLKASD-APKAAAVAAPQAATNAEFGGMKMVMKKRQDEEFIVMGGGKKKGXXXXXXXXXXXXXXXXTIVHAIDTMESFSMLSIAPPANKVSLQ 525
D+WY+++R K K+ E +R A+ ALE EEAKKIPYE EM LCD LV+ L T+L A D A +A A + F G V KK D F+ MG GKKK +D+ E F L ++PP N S+Q
Sbjct: 291 DKWYDAQRAIKKQKQMKYDEEKKQREEEWAAKKAALEAEEAKKIPYEEEMNLCDYLVKNLSKTYLGADDKADNSAKKEEVIAVKDDPFAGFAPV-KKDDDAIFLKMGPGKKKRDRSAKKNKIAPIFKLN-----VDSFEQFGSLGLSPPTNIDSVQ 440
BLAST of mRNA_S-firma_F_contig10995.1311.1 vs. uniprot
Match: A0A7S2KYR3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KYR3_9STRA) HSP 1 Score: 60.5 bits (145), Expect = 1.460e-7 Identity = 44/94 (46.81%), Postives = 56/94 (59.57%), Query Frame = 1
Query: 1 QINVKIEEIKELRSAHRAKLDQWYNSRRERNKFKKALLKAEWVERVAAKTARTKALEEEEAKKIPYESEMVLCDTLVQYLETTFLKASDAPKAA 282
QIN I+E R +R + W+ R KK + E R A A+ KA+EEEEAKKIPYE EM LCD LV+YL+ T++K +DA KAA
Sbjct: 280 QINSIKAVIREKRDEYRKANNAWFLYTRALRIQKKMKYEEEKKAREEAWAAKQKAIEEEEAKKIPYEEEMGLCDYLVKYLDDTYVK-TDAEKAA 372
BLAST of mRNA_S-firma_F_contig10995.1311.1 vs. uniprot
Match: G4ZG65_PHYSP (Uncharacterized protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4ZG65_PHYSP) HSP 1 Score: 54.7 bits (130), Expect = 1.590e-5 Identity = 53/113 (46.90%), Postives = 69/113 (61.06%), Query Frame = 1
Query: 175 EEAKKIPYESEMVLCDTLVQYLETTFLKA--SDAPKAAAVAAPQAATNAEFGGMKMVMKKRQDEEFIVMGGGKKKGXXXXXXXXXXXXXXXXTIVHAIDTMESFSMLSIAPPA 507
E AK PY+ EM LCD LV +LE T+ K + KA A AAP E GMK + R++E+F+++GGGKK XXXXXXXXXXX IV + +E+FS + + PPA
Sbjct: 300 EMAKIHPYQDEMDLCDALVSFLEKTYAKELKEEVEKAEAAAAP-----VELDGMKPLQ--RKEEDFMMLGGGKKN----KXXXXXXXXXXXGKIVLPLAQLEAFSTIGLLPPA 401 The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10995.1311.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90) Total hits: 8
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-firma_F_contig10995.1311.1 >prot_S-firma_F_contig10995.1311.1 ID=prot_S-firma_F_contig10995.1311.1|Name=mRNA_S-firma_F_contig10995.1311.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=179bp QINVKIEEIKELRSAHRAKLDQWYNSRRERNKFKKALLKAEWVERVAAKTback to top mRNA from alignment at S-firma_F_contig10995:271..4402+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-firma_F_contig10995.1311.1 ID=mRNA_S-firma_F_contig10995.1311.1|Name=mRNA_S-firma_F_contig10995.1311.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=4132bp|location=Sequence derived from alignment at S-firma_F_contig10995:271..4402+ (Sphaerotrichia firma ET2_F female)back to top Coding sequence (CDS) from alignment at S-firma_F_contig10995:271..4402+ >mRNA_S-firma_F_contig10995.1311.1 ID=mRNA_S-firma_F_contig10995.1311.1|Name=mRNA_S-firma_F_contig10995.1311.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=1074bp|location=Sequence derived from alignment at S-firma_F_contig10995:271..4402+ (Sphaerotrichia firma ET2_F female)back to top |