mRNA_S-firma_F_contig10992.1308.1 (mRNA) Sphaerotrichia firma ET2_F female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-firma_F_contig10992.1308.1
Unique NamemRNA_S-firma_F_contig10992.1308.1
TypemRNA
OrganismSphaerotrichia firma ET2_F female (Sphaerotrichia firma ET2_F female)
Homology
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BLAST of mRNA_S-firma_F_contig10992.1308.1 vs. uniprot
Match: A0A6H5KV68_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KV68_9PHAE)

HSP 1 Score: 329 bits (843), Expect = 3.190e-107
Identity = 172/257 (66.93%), Postives = 195/257 (75.88%), Query Frame = 2 
Query:   89 AMGLLLVVLVGDMVGAFIPGKLILNSRTACSWRRDSLQD-QRLRKVPDQAYRDERWQPLRGASGAGVGVTGTGDDARVVRQAKAWVRDVVVKLRLCPFAEAVFKASKGVRYVVTPAKNTDEVWRDFLREVDFLMEHSREEVGTTLLLVPHCLTDLQDFNDFCGWLEETIEGDELLVDQVLVACFHPRHAFHGLDEDDVLNYEKRSPHPTINLLRADMVDEYIALGKTLGIAEHNERALQKEGKDAVKAAFEATLALE 856
            A+ L+  +L  D +GAF     + NS    + R +     +R R    QAYR     P   A G         DDAR+VRQAKAWVRDVVVKLRLCPFAEAVF A +GVRYVVTPA+ TDEVWR+FL EVDFLM+H RE+VGTTLL+ P  L+D ++FNDFC WLEE IE DE LVDQVLVACFHPRHAFHGL++DDVLNYEKRSPHPTINLLRADMVDEYIA+G+TLGIAEHNER L +EGKD VKAAFEATLALE
Sbjct:    6 ALVLVAFILATDTIGAFPLHGGVSNSGRLLALRTNMKTPLRRPRAAVSQAYRRRACVPRANAGGD------LEDDARIVRQAKAWVRDVVVKLRLCPFAEAVFNARRGVRYVVTPAETTDEVWREFLLEVDFLMDHDREDVGTTLLIAPRFLSDFREFNDFCRWLEEAIENDEALVDQVLVACFHPRHAFHGLEQDDVLNYEKRSPHPTINLLRADMVDEYIAMGRTLGIAEHNERRLHQEGKDVVKAAFEATLALE 256
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BLAST of mRNA_S-firma_F_contig10992.1308.1 vs. uniprot
Match: D7G223_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G223_ECTSI)

HSP 1 Score: 257 bits (656), Expect = 1.350e-79
Identity = 125/173 (72.25%), Postives = 139/173 (80.35%), Query Frame = 2 
Query:  209 RLRKVPDQAYRDERWQPLRGASGAGVGVTGTGDDARVVRQAKAWVRDVVVKLRLCPFAEAVFKASKGVRYVVTPAKNTDEVWRDFLREVDFLMEHSREEVGTTLLLVPHCLTDLQDFNDFCGWLEETIEGDELLVDQVLVACFHPRHAFHGLDEDDVLNYEKRSPHPTINLLR 727
            R R    QAYR +   P+  A G         DDAR++RQAKAWVRDVVVKLRLCPFAEAVF A  GVRYVVTPA+ TDEVWR+FL EVDFLM+H RE+VGTTLL+ P  L+D ++FNDFC WLEETIE DE LVDQVLVACFHPRHAFHGL++DDVLNYEKRSPHPTINLLR
Sbjct:   47 RPRAAVSQAYRRQACVPMANAGGD------LEDDARIIRQAKAWVRDVVVKLRLCPFAEAVFNARSGVRYVVTPAETTDEVWREFLLEVDFLMDHDREDVGTTLLIAPRFLSDFREFNDFCRWLEETIEDDEALVDQVLVACFHPRHAFHGLEQDDVLNYEKRSPHPTINLLR 213
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BLAST of mRNA_S-firma_F_contig10992.1308.1 vs. uniprot
Match: A0A2V3IJ06_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IJ06_9FLOR)

HSP 1 Score: 138 bits (348), Expect = 1.660e-34
Identity = 69/168 (41.07%), Postives = 103/168 (61.31%), Query Frame = 2 
Query:  338 WVRDVVVKLRLCPFAEAVFKASKGVRYVVTPAKNTDEVWRDFLREVDFLMEHSREEVGTTLLLVPH-CLTDLQDFNDFCGWLEETIEGDELLVDQVLVACFHPRHAFHGLDEDDVLNYEKRSPHPTINLLRADMVDEYIALGKTLGIAEHNERALQKEGKDAVKAAFE 838
            WVR +V++  LCPFAE    + + VR VV+ A         F  EV  LM    +E+ TTL+++P    TD   F++F   +E+ I  D  LVD VL+A FHP H + G+  D  LN+EKR+P+PTIN+LR  ++D+YI+ G+T+ I  HN++ L+K G D +K  ++
Sbjct:   30 WVRRIVIEKGLCPFAEPAVDSDR-VRLVVSSATCESTARDKFYTEVRLLMSADPDEIVTTLIVMPDFATTDFLRFHEFASDIEDEISEDVNLVDAVLIAAFHPMHRYEGMGADSALNFEKRAPYPTINILRTPLLDDYISQGRTMNIPHHNKQVLEKLGSDKLKLLYQ 196
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BLAST of mRNA_S-firma_F_contig10992.1308.1 vs. uniprot
Match: R7Q3Y7_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q3Y7_CHOCR)

HSP 1 Score: 129 bits (323), Expect = 9.530e-28
Identity = 77/188 (40.96%), Postives = 108/188 (57.45%), Query Frame = 2 
Query:  248 RWQPLRGASGAGVGVTGTGDDARVVRQAKAWVRDVVVKLRLCPFAEAVFKASKGVRYVVTPAKNTDEVWRDFLREVDFLMEHSREEVGTTLLLVP-HCLTDLQDFNDFCGWLEETIEGDELLVDQVLVACFHPRHAFHGL-DEDDVLNYEKRSPHPTINLLRADMVDEYIALGKTLGIAEHNERALQK 805
            R +P+RG      G   T D   V  +  AW R VV  L LCPFAE V   S  VR  V  A     V      E+  L+    +++ T+LL++P     D + F+  C  LE+ IE DE +VD+V++ACFHPRH + G+ DED  LN++KR+P+P IN LRA +VD+Y++ GKT  I E N+  L++
Sbjct:   98 RRRPIRGHLS---GPPPTYDPVSVEARVMAWARIVVCGLNLCPFAEGVLD-SNTVRVQVRQASEERGVQAAVAEEISLLLATHPDDMSTSLLVLPAFAEDDFRRFHALCVALEDDIERDEDMVDEVMLACFHPRHEWAGVGDEDAALNFDKRAPYPVINFLRARVVDQYVSEGKTQRILEQNQETLER 281
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BLAST of mRNA_S-firma_F_contig10992.1308.1 vs. uniprot
Match: A0A6U6AQE9_GUITH (Hypothetical protein n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A6U6AQE9_GUITH)

HSP 1 Score: 117 bits (294), Expect = 2.330e-26
Identity = 69/193 (35.75%), Postives = 112/193 (58.03%), Query Frame = 2 
Query:  305 DDARVVRQAKAWVRDVVVKLRLCPFAEAVFKASKGVRYVVTPAKNTDEVWRDFLREVDFLMEHSREEVGTTLLLVPHCLTDLQDFNDFCGWLEETI---EGDELLVDQVLVACFHPRHAFHGLDEDDVLNYEKRSPHPTINLLRADMVDEYI--ALGKTL----GIAEHNERALQKEGKDAVKAAFEATLALE 856
            +D  ++ Q +AWV++++V+L LCPFA   F+    VRY ++ A+   E+  D L+E   L++   EE  TTLLL P+    L+D+++   +LEE I   E D LL  +V +A FHP   F+ +D +D +++E+R+P PTI+LLR D +  Y+  AL K +     + + NE  L+K G D ++        L+
Sbjct:   61 EDKIMIAQTRAWVKEMIVELNLCPFARTPFQKDT-VRYSISNAQKEKELIDDILQEACKLLDDDPEETATTLLLAPYWADALEDWSELGYFLEEEIFDKEDDPLLEGRVGIAFFHPNWTFNEMDNNDPIHFERRAPIPTISLLRKDDIGVYVQDALEKGIILSKKVQDDNEVTLRKYGYDKLERKMSQIKQLQ 252
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BLAST of mRNA_S-firma_F_contig10992.1308.1 vs. uniprot
Match: W7TR03_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TR03_9STRA)

HSP 1 Score: 116 bits (290), Expect = 1.070e-24
Identity = 70/179 (39.11%), Postives = 101/179 (56.42%), Query Frame = 2 
Query:  305 DDARVVRQAKAWVRDVVVKLRLCPFAEAVFKASKGVRYVVTPAKNTDEVWRDFLREVDFLMEHSREEVGTTLLLVPHCLT-DLQDFNDFCGWLEETIEGDELLVDQVLVACFHPRHAFHG-LDEDDVLNYEKRSPHPTINLLRADMVDEYIALGKTLGIAEHNERALQKEGKDAVKAAF 835
            DDA V+ + +AW+ ++V+++ LCPFAE V +    VRYVV  A+   ++    L E   L+E   +   TT++L P     D   F +   +LE ++E  +L    VL+A FHP++ F G L E D +++EKRSP P  NLLRA+ V  Y   G T  IA+ NE AL   G D V+  F
Sbjct:  198 DDAAVIARTQAWIHNMVIRIPLCPFAEKVVQ-DNTVRYVVVRARRKSDIIAHVLEEARALVETPEDVTATTIVLAPDAFVEDFSAFYETERFLEASLEASDL-QHVVLLAAFHPQYTFGGGLSELDPIHFEKRSPFPVFNLLRAERVWAYANEGLTEKIADRNEAALAAIGIDEVRRRF 374
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BLAST of mRNA_S-firma_F_contig10992.1308.1 vs. uniprot
Match: A0A5J4Z662_PORPP (Uncharacterized protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z662_PORPP)

HSP 1 Score: 110 bits (275), Expect = 7.140e-24
Identity = 63/187 (33.69%), Postives = 97/187 (51.87%), Query Frame = 2 
Query:  308 DARVVRQAKAWVRDVVVKLRLCPFAEAVFKASKGVRYVVTPAKNTDEVWRDFLREVDFLMEHSREEVGTTLLLVPH-CLTDLQDFN---DFCGWLEETIEGDELLVDQVLVACFHPRHAFHGLDEDDVLNYEKRSPHPTINLLRADMVDEYIALGKTLGIAEHNERALQKEGKDAVKAAFEATLALE 856
            D +V ++   WVRD+V+ L LCPFAE   +  K +  V+    + D++     RE+   +    + V T LL+VP     D Q F    +F    EE IE D ++ + V+   FHP H ++GLD  D +N+++R+P+P  N LR   VD   ALG T  I E N+  L   G + ++A  ++    E
Sbjct:   60 DLKVQQRVMKWVRDIVIGLGLCPFAERELREGKMLVRVLESVTSFDKLSEIIEREMGKFVAPDMQHVSTYLLVVPPGSFLDAQPFEVFAEFAAEFEERIERDPVMSELVMPVFFHPNHQWYGLDPTDPVNFDRRAPYPICNFLRTPQVDRLAALGLTQTILEDNQTILGNTGFEQLRALHQSIYLSE 246
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BLAST of mRNA_S-firma_F_contig10992.1308.1 vs. uniprot
Match: A0A835YZ09_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZ09_9STRA)

HSP 1 Score: 104 bits (259), Expect = 1.270e-23
Identity = 49/78 (62.82%), Postives = 60/78 (76.92%), Query Frame = 2 
Query:  623 LVACFHPRHAFHGLDEDDVLNYEKRSPHPTINLLRADMVDEYIALGKTLGIAEHNERALQKEGKDAVKAAFEATLALE 856
            +VACFHP H F GL  DD L+YEKRSP+P INLLRA  VDEYIA GKT GIA++NER L++ G+  +K  FEA LA++
Sbjct:    1 MVACFHPGHTFAGLPPDDPLHYEKRSPYPVINLLRAPSVDEYIAQGKTQGIADNNERRLRQVGRALLKETFEAILAMD 78
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BLAST of mRNA_S-firma_F_contig10992.1308.1 vs. uniprot
Match: A0A644Z096_9ZZZZ (Uncharacterized protein n=1 Tax=bioreactor metagenome TaxID=1076179 RepID=A0A644Z096_9ZZZZ)

HSP 1 Score: 108 bits (270), Expect = 1.440e-23
Identity = 67/169 (39.64%), Postives = 92/169 (54.44%), Query Frame = 2 
Query:  308 DARVVRQAKAWVRDVVVKLRLCPFAEAVFKASKGVRYVVTPAKNTDEVWRDFLREVDFLMEHSREEVGTTLLLVPHCLTDLQDFNDFCGWLEETIEGDELLVDQVLVACFHPRHAFHGLDEDDVLNYEKRSPHPTINLLRADMVDEYIAL-GKTLGIAEHNERALQKEG 811
            D +VV     W+   V+ L LCPFA+ V    + + YVV+ A +   +  D  RE++ L E S E+  TTLL+VP CL D  DFNDF    +E I+  EL    + VA FHP   F G + DDV N   R P+PT++LLR D +D  + +  +   I E N   L+K G
Sbjct:   19 DRQVVADTVNWLEKAVIGLNLCPFAKGVHVKGQ-IHYVVSHATDARALADDLHRELEALAEISPEKRDTTLLMVPDCLEDFLDFNDFLELADELIDALEL-GGILQVASFHPDFQFEGTEFDDVSNCTNRGPYPTLHLLREDSIDRAVEVFPEAEQIYERNIEVLEKLG 185
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BLAST of mRNA_S-firma_F_contig10992.1308.1 vs. uniprot
Match: A0A0Q9CU34_9BURK (Peptidase n=4 Tax=Acidovorax TaxID=12916 RepID=A0A0Q9CU34_9BURK)

HSP 1 Score: 107 bits (266), Expect = 5.100e-23
Identity = 68/167 (40.72%), Postives = 93/167 (55.69%), Query Frame = 2 
Query:  320 VRQAKAWVRDVVVKLRLCPFAEAVFKASKGVRYVVTPAKNTDEVWRDFLR-EVDFLMEHSREEVGTTLLLVPHCLTDLQDFNDFCGWLEETIEGDELLVDQVL-VACFHPRHAFHGLDEDDVLNYEKRSPHPTINLLRADMVDEYIAL-GKTLGIAEHNERALQKEG 811
            VR    W+   V+ L LCPFA+ V    + + YVV P ++  EV  D LR E+  L+  S E   TTL+++P+CL D  DFNDF G  E  +E  +L  D  L +A FHP+  F G D DDV N   RSP+PT++LLR + +D  + +  +   I E N   LQ  G
Sbjct:   21 VRNTVHWLERAVIGLNLCPFAKGVHVKGQ-IHYVVAPTEDLTEVL-DLLRCELSALVAASAETRDTTLVILPYCLQDFLDFNDFLGEAEALLEAMDL--DGTLQIASFHPQFQFAGTDSDDVTNCTNRSPYPTLHLLREESIDRAVEVFPEAEMIFERNIEVLQALG 183
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10992.1308.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KV68_9PHAE3.190e-10766.93Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G223_ECTSI1.350e-7972.25Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A2V3IJ06_9FLOR1.660e-3441.07Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7Q3Y7_CHOCR9.530e-2840.96Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A6U6AQE9_GUITH2.330e-2635.75Hypothetical protein n=1 Tax=Guillardia theta TaxI... [more]
W7TR03_9STRA1.070e-2439.11Uncharacterized protein n=1 Tax=Nannochloropsis ga... [more]
A0A5J4Z662_PORPP7.140e-2433.69Uncharacterized protein n=1 Tax=Porphyridium purpu... [more]
A0A835YZ09_9STRA1.270e-2362.82Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A644Z096_9ZZZZ1.440e-2339.64Uncharacterized protein n=1 Tax=bioreactor metagen... [more]
A0A0Q9CU34_9BURK5.100e-2340.72Peptidase n=4 Tax=Acidovorax TaxID=12916 RepID=A0A... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_F_contig10992contigS-firma_F_contig10992:522..4384 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef902022-09-19
OGS1.0 of Sphaerotrichia firma ET2_F female2021-02-24
Properties
Property NameValue
Seed ortholog2880.D7G223
PFAMsDUF1415
Max annot lvl2759|Eukaryota
Evalue7.8e-84
EggNOG OGsCOG3310@1|root,2S8QH@2759|Eukaryota
DescriptionProtein of unknown function (DUF1415)
COG categoryS
Hectar predicted targeting categorysignal peptide
Ec32 ortholog descriptionProtein of unknown function DUF1415
Ec32 orthologEc-20_002820.1
Exons6
Model size1538
Cds size789
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_F_contig10992.1308.1prot_S-firma_F_contig10992.1308.1Sphaerotrichia firma ET2_F femalepolypeptideS-firma_F_contig10992 592..3705 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815643.8283896-UTR-S-firma_F_contig10992:521..5911622815643.8283896-UTR-S-firma_F_contig10992:521..591Sphaerotrichia firma ET2_F femaleUTRS-firma_F_contig10992 522..591 +
1696949474.5289698-UTR-S-firma_F_contig10992:521..5911696949474.5289698-UTR-S-firma_F_contig10992:521..591Sphaerotrichia firma ET2_F femaleUTRS-firma_F_contig10992 522..591 +
1622815643.9328134-UTR-S-firma_F_contig10992:3705..43841622815643.9328134-UTR-S-firma_F_contig10992:3705..4384Sphaerotrichia firma ET2_F femaleUTRS-firma_F_contig10992 3706..4384 +
1696949474.6323545-UTR-S-firma_F_contig10992:3705..43841696949474.6323545-UTR-S-firma_F_contig10992:3705..4384Sphaerotrichia firma ET2_F femaleUTRS-firma_F_contig10992 3706..4384 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815643.8502553-CDS-S-firma_F_contig10992:591..7311622815643.8502553-CDS-S-firma_F_contig10992:591..731Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10992 592..731 +
1696949474.5482707-CDS-S-firma_F_contig10992:591..7311696949474.5482707-CDS-S-firma_F_contig10992:591..731Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10992 592..731 +
1622815643.8672354-CDS-S-firma_F_contig10992:1166..12841622815643.8672354-CDS-S-firma_F_contig10992:1166..1284Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10992 1167..1284 +
1696949474.5742412-CDS-S-firma_F_contig10992:1166..12841696949474.5742412-CDS-S-firma_F_contig10992:1166..1284Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10992 1167..1284 +
1622815643.8794014-CDS-S-firma_F_contig10992:1742..19161622815643.8794014-CDS-S-firma_F_contig10992:1742..1916Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10992 1743..1916 +
1696949474.5880625-CDS-S-firma_F_contig10992:1742..19161696949474.5880625-CDS-S-firma_F_contig10992:1742..1916Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10992 1743..1916 +
1622815643.894205-CDS-S-firma_F_contig10992:2246..23481622815643.894205-CDS-S-firma_F_contig10992:2246..2348Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10992 2247..2348 +
1696949474.6044514-CDS-S-firma_F_contig10992:2246..23481696949474.6044514-CDS-S-firma_F_contig10992:2246..2348Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10992 2247..2348 +
1622815643.904953-CDS-S-firma_F_contig10992:3052..31741622815643.904953-CDS-S-firma_F_contig10992:3052..3174Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10992 3053..3174 +
1696949474.6138148-CDS-S-firma_F_contig10992:3052..31741696949474.6138148-CDS-S-firma_F_contig10992:3052..3174Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10992 3053..3174 +
1622815643.9151747-CDS-S-firma_F_contig10992:3572..37051622815643.9151747-CDS-S-firma_F_contig10992:3572..3705Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10992 3573..3705 +
1696949474.6224046-CDS-S-firma_F_contig10992:3572..37051696949474.6224046-CDS-S-firma_F_contig10992:3572..3705Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10992 3573..3705 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-firma_F_contig10992.1308.1

>prot_S-firma_F_contig10992.1308.1 ID=prot_S-firma_F_contig10992.1308.1|Name=mRNA_S-firma_F_contig10992.1308.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=263bp
MVVAMVAMGLLLVVLVGDMVGAFIPGKLILNSRTACSWRRDSLQDQRLRK
VPDQAYRDERWQPLRGASGAGVGVTGTGDDARVVRQAKAWVRDVVVKLRL
CPFAEAVFKASKGVRYVVTPAKNTDEVWRDFLREVDFLMEHSREEVGTTL
LLVPHCLTDLQDFNDFCGWLEETIEGDELLVDQVLVACFHPRHAFHGLDE
DDVLNYEKRSPHPTINLLRADMVDEYIALGKTLGIAEHNERALQKEGKDA
VKAAFEATLALE*
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mRNA from alignment at S-firma_F_contig10992:522..4384+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-firma_F_contig10992.1308.1 ID=mRNA_S-firma_F_contig10992.1308.1|Name=mRNA_S-firma_F_contig10992.1308.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=3863bp|location=Sequence derived from alignment at S-firma_F_contig10992:522..4384+ (Sphaerotrichia firma ET2_F female)
GCACGGAGCAGCGGCTTCGCAGCTTCGCCCTACTAAGCCCTCCGCCTGGT
ACGCCACGACGGCAGGAAGAATGGTGGTGGCCATGGTAGCTATGGGGTTG
CTGCTGGTGGTGCTTGTGGGAGATATGGTTGGAGCTTTCATCCCGGGCAA
GCTGATCTTGAACAGCAGGACTGCTTGTAGTTGGAGGAGGGATTCACTTC
AGGACCAAAGGTATGTGGACAATACTGCTGTTACTTCACTTTGCGCGACG
TGGAGTCTCTCTTGGTGGCTGTTACCTCCTGTCCTTCGGTGGCTTTTACC
TCCAGTTTTTAGAGGGCCGGGGGCTCAGCGAGTGTGCGGCAGCGACACCA
CCGTGAAGTGCGTCCAGCCCACATGCGAACCCTTCTGTCGGATGTGTCCA
GCCTATGCTGACACAGCACACCCCATGCACCACCATGCACCTCGTCGCCG
TTGTTGCAAGTGGTGCTCTCTTTCTGATGATATGCTCTAGGCTCGGAAAA
GGGAGAGTATTTTAATGGACACAGCAGGAGCGCTTGCTTCTCACTTCTAT
TTGTTGTATGTACGTCGGGGACGTTGGGTTGACGGTTGACGCCCGCCACC
GCCGTGTTGTTGTCGTTGGTGTTGTTGTGACCACATCACTAACAGGTTGC
GGAAGGTGCCTGACCAGGCCTACAGAGACGAGAGGTGGCAACCACTGAGG
GGCGCGTCCGGGGCCGGCGTGGGGGTGACTGGAACTGGGGATGATGCTAG
GGTCGTCCGGCAGGTTTGTTTTCGTGAAGACAGAGGAACATGAGTCCAAT
TTTCTTCCGCGGATCCTCGATGCCTGCATGCGGCGTGGTCACGTCTCATT
TTTAGCCCGAGCGGCAGTGACACACAATCACACAAATGCTATCTAGTATG
TCGCGCGGAGGATCACTTACGGTACCGCGGGCCCACCCAAGGAATACGCC
GCACGGGTGCTCCTACATCATTGTCGCCGTGTCTACATACAGCAGTATGA
CGAGTCCAGTTTGGTGGCGCTCAACGCAACTTCAAGCTTGGGTACGCGCC
GAGGCCATGGGGTAGTACCCGCTTTAGGGGGCCGTTCTCTAGAAGCACGT
GCCTACCCTGAAAGCCCGAAGTTGCCAGTTACGTCAAGACCTCGATCCCA
GCTGCTTTCAAGATAAGCGGCGCGTCTTGAGCACAGAGTTTCCTTGCATT
TTTTATGTGTGCCCTTGCCAGGCGAAAGCGTGGGTGCGAGACGTGGTGGT
GAAGCTGAGGCTTTGCCCTTTCGCGGAGGCGGTATTCAAGGCCAGCAAAG
GCGTTCGGTATGTCGTTACGCCCGCGAAAAACACGGACGAGGTGTGGAGA
GACTTCTTGCGAGAAGTCGACTTCCTCATGGAGCACAGCAGGGAGGTGAT
GCACTTTTTTTTTACTTGATGCTGGCGTGGGTGTCATCTCGCGCCGTGTT
TCCAGTGTAGAGCCAACATTGCAGGGCATTTTTTTCGGCTCGTGAGTGCC
TCCAGATGTCAAGAGCTGCCATGTTGAGCCAGACGGTGCGAGTCCTGCTT
GTAACCTGTCGTGTGCTCTTCAGTTGCAGTTTTTGGCCACCGGTTGACAA
CGTCCCTACTGGCTGTACATTGTTCTTGATTCGGTGCTGCCGCGGCTGGG
AAGCCTTGCGGTTGTCCTTTTTATTTGTCGACCGTGACAACCAGCCCCCG
TCTGAAATGATGCCGCCCTTGCCAGGAAGTGGGAACAACCCTGTTGTTGG
TGCCGCACTGCTTGACGGACCTCCAAGATTTCAACGATTTTTGCGGGTGG
CTGGAGGAGACGATAGAAGGCGACGAGGCGAGTCTCCGCGAGGCAGTGGT
TGTCTTGCTGACCCGAGGGTGTTTAAATGAATGTTCTACAATGTGTCAGC
GGTACACCTCCGACCTGTGAATAAAGCGTTCCGGGGTGCGTTATCGTGCT
TTCGCCATGTACATTTCCGAAACAATCTGGTATCCATTTCAAACGTGTGG
AGGTACACCGGCATGTGTCTGTAGCTGTTGGGAAGGCCGTGCTTTTGCCG
CCCAGAGTACACTTTTCAAACGCCAAATCTGTCCGACAACGCGCACCCAT
CCTGCAATTTCAGGTGTTGAGTTCATCTAAAAAGCCAAATCCTTAGCTCA
AGCAACAACACGGCACTGATGCGATGTTACAGTCTGTCTGAGGCATCTCT
TGCCCAAGCAGGACACAGCTTAAACCACGCCTGGAGCGTTCGTGGACTCG
AGCGACGCGTTGTTGGATGTGATGAAATGGCGCACGACCGCGCCTTTGTT
GCTGCTACAAGTAGTCTGCCACTCACAACTATATCAACCGACCTAAAAAG
GGAGAAGACTGCGGGCACCTTTTTTCTCTCTCTCTCTCATCAAACGCCGT
TGTTTCGGACGCTTGTCTGTGCTCACTACATATATATCCGACCTGACCTT
TCCCACTTGCGCTATCCCACATCGGCGTCGAATGTCGCTCTTGCTCCTGG
CGGGCTGTGTGTGTTCCCTTTCTCTTGCCAGCTCCTCGTCGACCAGGTGC
TGGTGGCGTGCTTTCACCCGAGACATGCCTTCCACGGGTTGGACGAGGAC
GACGTGTTGAACTACGAAAAACGGTCTCCCCACCCTACCATCAATCTGCT
CAGGTTTGTCTTTGTTGGCACTTCAAGGCCCGCTCCCTAAGAAGAGGGTG
CAACTTGAGGCGCTCAAAGAGAGTGCACAGCATGTTCGTAGTCATGACCT
GCTTTCGGAAAGGAGAGGGGTGTGCGGCTTTCCTGAAGGCTCGACGTTGG
GTGGCTGGCCGAAGCACCATATGAAGTAATTGGGCACCGAAACGTCCGGG
GATCGGGTTCAAACAGTACGCAGTTTCCTTTTCGAGTGCGCCCCTCCTGT
CCTCGAGCTACTGTACGCTTTCACACAAAAGATTTGGCCCTCGCCGTTGC
ATAGCTACAACAGCAGTTTACCCGGTCTGCGCGCGGTTGAAACGTGAGAA
TGACGACACCACAAAAAAAAATGGCGCGTGACCGTGTGGGAAAAAATGCA
GGGCCGACATGGTGGACGAGTACATCGCGCTGGGGAAAACGCTCGGTATT
GCGGAGCACAACGAGCGAGCGTTGCAGAAGGAGGGCAAGGACGCTGTCAA
AGCTGCTTTCGAAGCTACCCTCGCGTTGGAATGACCTACTAAATTTATTT
GACCCAATGATGGGATCGATGCTTGTTAAGGTCCCGTATTTGTAGAGTCC
GATCACAGATGGGATCTCGGGAACACAACGAGGCGCGCCTAAACAGCGAC
GTTTCACCCTTTAATACGACCCAGACCCAGGAAGAGCGCTGGCAACACGA
GGCGGGACCAGGCGCTGTTCTATGCTTGACACTCGAGCTCGGGCTAGTTT
AGATTCAAAGAAGCCTTGGCACGACGGCTGATAAGTCGCCCACCGCAAAG
CCGAAACTAAGCGGCAAAAATTCTTGCGGATACCAACCCCCCCCCCCAAC
AGAACAACGACGTGTCCAGAGACGAAGGGACAACAAAGTTCGCACTTTCG
CCGGCGCAAGCAAACAGAGAAACGGACGTAGTCTACATCTCTTTCCCCAA
CCCACCATCAACGTACCCCTTTCGTCATCGGTCACGCGAGGGGCGTCGCT
GCGGCGCGGTGCGCAACGCTGCTCCGAGAATCTGACCCTAGACTGTATCT
ACGAAGGATCTTCCGTGTCTTTTGGATCGTACCCCAGCTGGTTCCTCGTC
CGAGTCGGAAATGACTCCGGGCCCGGAGGAGGAATCCGCGTTGAAAGACC
ACCCCAAGGAATCGGAGGTCCCATCGTAGGCATCACGCGCAAAACTCTAA
AATACATTCAACA
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Coding sequence (CDS) from alignment at S-firma_F_contig10992:522..4384+

>mRNA_S-firma_F_contig10992.1308.1 ID=mRNA_S-firma_F_contig10992.1308.1|Name=mRNA_S-firma_F_contig10992.1308.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=1578bp|location=Sequence derived from alignment at S-firma_F_contig10992:522..4384+ (Sphaerotrichia firma ET2_F female)
ATGGTGGTGGCCATGGTAGCTATGGGGTTGCTGCTGGTGGTGCTTGTGGG
AGATATGGTTGGAGCTTTCATCCCGGGCAAGCTGATCTTGAACAGCAGGA
CTGCTTGTAGTTGGAGGAGGGATTCACTTCAGGACCAAAGATGGTGGTGG
CCATGGTAGCTATGGGGTTGCTGCTGGTGGTGCTTGTGGGAGATATGGTT
GGAGCTTTCATCCCGGGCAAGCTGATCTTGAACAGCAGGACTGCTTGTAG
TTGGAGGAGGGATTCACTTCAGGACCAAAGGTTGCGGAAGGTGCCTGACC
AGGCCTACAGAGACGAGAGGTGGCAACCACTGAGGGGCGCGTCCGGGGCC
GGCGTGGGGGTGACTGGAACTGGGGATGATGCTAGGGTCGTCCGGCAGGT
TGCGGAAGGTGCCTGACCAGGCCTACAGAGACGAGAGGTGGCAACCACTG
AGGGGCGCGTCCGGGGCCGGCGTGGGGGTGACTGGAACTGGGGATGATGC
TAGGGTCGTCCGGCAGGCGAAAGCGTGGGTGCGAGACGTGGTGGTGAAGC
TGAGGCTTTGCCCTTTCGCGGAGGCGGTATTCAAGGCCAGCAAAGGCGTT
CGGTATGTCGTTACGCCCGCGAAAAACACGGACGAGGTGTGGAGAGACTT
CTTGCGAGAAGTCGACTTCCTCATGGAGCACAGCAGGGAGGCGAAAGCGT
GGGTGCGAGACGTGGTGGTGAAGCTGAGGCTTTGCCCTTTCGCGGAGGCG
GTATTCAAGGCCAGCAAAGGCGTTCGGTATGTCGTTACGCCCGCGAAAAA
CACGGACGAGGTGTGGAGAGACTTCTTGCGAGAAGTCGACTTCCTCATGG
AGCACAGCAGGGAGGAAGTGGGAACAACCCTGTTGTTGGTGCCGCACTGC
TTGACGGACCTCCAAGATTTCAACGATTTTTGCGGGTGGCTGGAGGAGAC
GATAGAAGGCGACGAGGAAGTGGGAACAACCCTGTTGTTGGTGCCGCACT
GCTTGACGGACCTCCAAGATTTCAACGATTTTTGCGGGTGGCTGGAGGAG
ACGATAGAAGGCGACGAGCTCCTCGTCGACCAGGTGCTGGTGGCGTGCTT
TCACCCGAGACATGCCTTCCACGGGTTGGACGAGGACGACGTGTTGAACT
ACGAAAAACGGTCTCCCCACCCTACCATCAATCTGCTCAGCTCCTCGTCG
ACCAGGTGCTGGTGGCGTGCTTTCACCCGAGACATGCCTTCCACGGGTTG
GACGAGGACGACGTGTTGAACTACGAAAAACGGTCTCCCCACCCTACCAT
CAATCTGCTCAGGGCCGACATGGTGGACGAGTACATCGCGCTGGGGAAAA
CGCTCGGTATTGCGGAGCACAACGAGCGAGCGTTGCAGAAGGAGGGCAAG
GACGCTGTCAAAGCTGCTTTCGAAGCTACCCTCGCGTTGGAATGAGGCCG
ACATGGTGGACGAGTACATCGCGCTGGGGAAAACGCTCGGTATTGCGGAG
CACAACGAGCGAGCGTTGCAGAAGGAGGGCAAGGACGCTGTCAAAGCTGC
TTTCGAAGCTACCCTCGCGTTGGAATGA
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