mRNA_S-firma_F_contig1099.1302.1 (mRNA) Sphaerotrichia firma ET2_F female
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Overview
Homology
BLAST of mRNA_S-firma_F_contig1099.1302.1 vs. uniprot
Match: A0A6H5JPM1_9PHAE (PfkB domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JPM1_9PHAE) HSP 1 Score: 588 bits (1516), Expect = 4.300e-206 Identity = 320/416 (76.92%), Postives = 344/416 (82.69%), Query Frame = 1
Query: 1 LLVALAAAVDIPPCAAFFASSSRCLHMSALEAAGPGGAAEGSKVPPSHR-SIVVVGLNGALQRTIVFKPPKGLHVGHVNRASSVGQGIGGKGQNVCVALRKLAEGGGCGXXXX-GEVDVTLAHFAGGKSGEAVCEDLSAMGVKLVTSNTEAEMRLCTSLVDERFGETTEIIEPWSAEITKEEQQVLLTGCREAFGELPSIHGLAVMGSSPAGVGKEALVDIMGAIAASRGFKGAETRVLVDSVVGFEALIDTGHVSLLKVNAEEVISLAERGREGGEGEAGGG-VSVWMEDKLAAAAVELFVRHGDRLPWIAVTNGGLPSYLFSREFLVESGALSSFWRVTPAPVDAINPIGAGDAVAAATLYEWTRGVELPEAFRRALSVGGATCTSRDPVCNSCFSMEEANGLLPDVRLEQIER 1239
LLVAL A +P C AF +HMS+ G A + +R S+VVVGLNGA QRTI+FKPPKGL VG VNRASSVG GIGGKGQNVCVALR LAEGGG G+VDVTLAHFAGGKSGE+VCE+LSAMGVKL+TS TEAEMRLCTSLVDERFGETTEIIEPWSAEIT EEQQVLL C+ FGE+P IHG+AVMGS+P GVGK+ALVDIMGAI S GFKGAETRVLVDSVVGF+AL+DTGH+SLLKVNAEEV+SLAE GREG VSVWMEDKLA AA ELFVRH RLPWIAVTNGGLPSYLFSREFL E G+LSSFWRVTPAPVDA+NPIGAGDAVAAATLYEWTRG ELPEAFRRALSVGGATCTSR+PVCNS FS+EEA GLLPDVRLEQI R
Sbjct: 9 LLVALVATAVLPLCPAFV------VHMSS------GTAVTSHRTSEDYRRSLVVVGLNGAQQRTIIFKPPKGLRVGDVNRASSVGSGIGGKGQNVCVALRTLAEGGGVADDGAQGDVDVTLAHFAGGKSGESVCENLSAMGVKLITSATEAEMRLCTSLVDERFGETTEIIEPWSAEITDEEQQVLLADCKSTFGEVPCIHGVAVMGSNPVGVGKDALVDIMGAITKSAGFKGAETRVLVDSVVGFQALVDTGHISLLKVNAEEVVSLAESGREGDXXXXXXXXVSVWMEDKLAMAAAELFVRHEGRLPWIAVTNGGLPSYLFSREFLGEDGSLSSFWRVTPAPVDAVNPIGAGDAVAAATLYEWTRGEELPEAFRRALSVGGATCTSRNPVCNSYFSIEEARGLLPDVRLEQIRR 412
BLAST of mRNA_S-firma_F_contig1099.1302.1 vs. uniprot
Match: A0A0L0FLD3_9EUKA (PfkB domain-containing protein n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0FLD3_9EUKA) HSP 1 Score: 118 bits (295), Expect = 1.810e-25 Identity = 128/390 (32.82%), Postives = 180/390 (46.15%), Query Frame = 1
Query: 151 IVVVGLNGALQRTIVFKPPKGLHVGHVNRASSVGQGIGGKGQNVCVALRKLAEGGGCGXXXXGEVDVTLAHFAGGK-SGEAVCEDLSAMGVK-----------LVTSNTEAEMRLCTSLVDE-RFGETTEIIEPWSAEITKEEQQVLLTGCREAFGELPSIHGLAVMGSSPAGVGKEALVDIMGAIAASRGFKGAETRVLVDSVV---GFEALIDTGHVSLLKVNAEEVISLAERGREGGEGEAGGGVSVWMEDKLAAAAVELFVRHGDRLPWIAVTNGGLPSYLFSREFLVESGALSSFWRVTPA----PVDAINPIGAGDAVAAATLYEWTRGVE--------LPEAFRRALSVGGATCTSRDPVCNSCFSMEEANGLLPDVRLEQIE 1236
I++VGLNGALQRTI L G VNR SV QGIGGKGQNV VA +K E + V L F G GE + + LS++ + L+T T R +LVD + GE TEI+EP T +LLT E + + + +A MGS P G K I+ +A T+VL+D+VV F+ ++ +LKVN E+ SLA+ + V + L AA +FV++ + IAVT+G +++F R+ + + F R A P +NPIGAGDAVA+ TL W + EAF+ L G A+C S + C + E + L + EQI+
Sbjct: 5 IMIVGLNGALQRTITLNS---LAQGAVNRGQSVKQGIGGKGQNVYVAAKKCQE---------TSLPVKLVQFVGSSFEGEYLTQLLSSLARENTRRTSMSESDLLTVRTPGRQRTAITLVDNGKGGEATEIVEPGEIVPTDCVDSLLLT-LNERY-KFTKVSAIAFMGSMPPGCPKNTYCGILRLVA------DENTKVLLDTVVLDDVFQTCVEMQCEVVLKVNGRELCSLADIKIQ----TTCESVFATPKQALEDAANNIFVKYAV-VHTIAVTDGAFAAHVFRRKTSDDCRYIG-FGRTELALPKLPSADVNPIGAGDAVASGTLIAWATSRNERISVRDTINEAFKWGLCCGAASCLS-----SKCSTFERS---LAEELYEQIK 360
BLAST of mRNA_S-firma_F_contig1099.1302.1 vs. uniprot
Match: A0A3D3JRZ4_9BACT (PfkB domain-containing protein n=1 Tax=Lentisphaeria bacterium TaxID=2053569 RepID=A0A3D3JRZ4_9BACT) HSP 1 Score: 115 bits (287), Expect = 8.890e-25 Identity = 101/338 (29.88%), Postives = 160/338 (47.34%), Query Frame = 1
Query: 142 HRSIVVVGLNGALQRTIVFKPPKGLHVGHVNRASSVGQGIGGKGQNVCVALRKLAEGGGCGXXXXGEVDVTLAHFAGGKSGEAVCEDLSAMGVKLVTSNTEAEMRLCTSLVDERFGETTEIIEPWSAEITKEEQQVLLTGCREAFGELPSIHGLAVMGSSPAGVGKEALVDIMGAIAASRGFKGAETRVLVDSVVGFEALIDTGHVSLLKVNAEEVISLAERGREGGEGEAGGGVSVWMEDKLAAAAVELFVRHGDRLPWIAVTNGGLPSYLFS--REFLVESGALSSFWRVTPAPVDAINPIGAGDAVAAATLYEWTRGVELPEAFRRALSVGGATC 1149
H + VGLN LQ+T++F+ L G +NRA S +GGK + +A + T+A+F GG++GE + + + + + + R+CT+L+ G+ TE+IEP S EI + T EA G+ G+ + G+ P GVG E +I AA++G + +L+DS E + TG V +LK+NA+E+ +L G S D AAA R + +AVT+G ++L+S R ++ + AL +NPIGAGD VAA L ++ G+ + EAF + L+ A+C
Sbjct: 5 HMKFLAVGLNPVLQKTLIFEQ---LQPGCINRAESQLATVGGKSIHFAIAGNTIEP-----------ASTTVAYFRGGETGEYIQQIIDDYQIPHIAVEIPGKTRVCTTLLCRTTGQMTELIEP-SPEIPPAFSDDMRTRVLEALGQF---DGIGLCGTWPPGVGPEFYAEI----AANKG----QATLLLDSCHMVEQTLQTGQVDILKINADEITTLC-------------GTS----DVFAAATA---CRERYNVEHVAVTDGPGRAFLWSGNRHWVFDLPALDGL----------LNPIGAGDTVAAVMLVKYLAGMPIDEAFAQGLAAASASC 286
BLAST of mRNA_S-firma_F_contig1099.1302.1 vs. uniprot
Match: A0A7S4F779_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4F779_CHRCT) HSP 1 Score: 111 bits (277), Expect = 1.860e-23 Identity = 98/311 (31.51%), Postives = 151/311 (48.55%), Query Frame = 1
Query: 148 SIVVVGLNGALQRTIVFKPPKGLHVGHVNRASSVGQGIGGKGQNVCVALRKLAEGGGCGXXXXGEVDVTLAHFAGGKSGEAVCEDLSAMGVKLVTSNTEAEMRLCTSLVDERFGETTEIIEPWSAEITKEEQQVLLTGCREAFGELPSIHGLAVMGSSPAGVGKEALVDIMGAIAASRGFKGAETRVLVDSVVGFEALIDTGHVSLLKVNAEEVISLAERGREGGEGEAGGGVSVWMEDKLAAAAVELFVRHGDRLPWIAVTNGGLPSYLFSREFLVESGALSSFWRVTPAPVDAINPIGAGDAVAAATLY 1080
S++VVG N ALQR V P L +G VNRA+S+ + +GGKGQ +AL + A G + TLA F GG +G AV LSA ++L+T T A R+CT+L+ TE+I+P S +++ E LL E L + LA+ G+ P+G ++ ++ +AAS G + VL+D + + ++++G V +LK+N E +L G S +R R +A+T+G P+ LF+ + + WR+ V+ +N IGAGD A LY
Sbjct: 5 SLLVVGPNPALQR--VLSLPTQLELGSVNRAASLSEYVGGKGQGAALALARWAPG-----------ETTLASFLGGDTGRAVEALLSASDLELLTQPTAAPTRICTTLLSPGVAGGTEVIDP-SGTVSEMELDALLGQIEE---RLHTFDALALCGTCPSGA-QDIYSRLVSMLAASA--SGDKCTVLLDGIKQVDEVLNSGRVDVLKINVLEATTLT-------------GTSSXXXXXXXXXXENGALRR--RRALLALTDGPKPALLFT--------SATQGWRLHVPSVEVVNAIGAGDVCTAVFLY 272
BLAST of mRNA_S-firma_F_contig1099.1302.1 vs. uniprot
Match: A0A7S2L182_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2L182_9STRA) HSP 1 Score: 106 bits (265), Expect = 3.990e-21 Identity = 108/337 (32.05%), Postives = 153/337 (45.40%), Query Frame = 1
Query: 148 SIVVVGLNGALQRTIVFKPPKGLHVGHVNRASSVGQGIGGKGQNVCVALRKLAEGGGCGXXXXGEVDVTLAHFAG-GKSGEAVCEDLS---AMGVKLVTSNTEAEMRLCTSLVDERFGETTEIIEPWSAEITKEEQQVLLTGCREAFGELPSIHGLAVMGSSPAGVGKEALVDIMGAIAASRGFKGAETRVLVDSVVGFEALI----------DTGHVSLLKVNAEEVISLAERGREGGEGEAGGGVSVWMEDKLAAAAVEL--FVRHGDRLPWIAVTNGGLPSYLFSREFLVESGALSSFWRVTPAPVDA--------INPIGAGDAVAAATLYEW 1086
SIVVVGLN ALQ+ + P L G+V+RA + G+GGKGQ+V VA+ L + V LA F G G G+AV L + KL N A +R CT++V + TE++E S E+T+EE + L + G+ +MGS P G G + + S G +T VL+DSV+G +AL+ D ++LK+NA E+ LA + E V +E+ A L + L ++ VT+G P YL E ES + + +D + PIGAGD VAA TL W
Sbjct: 25 SIVVVGLNAALQKRFILPPNTNLEPGNVHRAHNSETGVGGKGQDVGVAMSCLMSK----EKQPRDDKVLLAQFLGMGPEGDAVSGALRLRRGLSDKLTIRNA-APLRTCTTIVGKDCA--TELVET-SGEVTEEELEQLGQKVESLVNDGGKASGVCIMGSMPPGCGDDTYAQL------SEKMVGKDTLVLIDSVIGLDALLKTLKSCFESDDREGGAVLKLNAAELCKLAGANKSEAE-------KVTVEELTTATRCFLTKYECASSALDYLCVTDGKFPGYLV--EVPKESTTENKINFIQLPAIDISKQVKGGMLYPIGAGDTVAAGTLAAW 338
BLAST of mRNA_S-firma_F_contig1099.1302.1 vs. uniprot
Match: A0A6U0RXL0_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A6U0RXL0_9STRA) HSP 1 Score: 97.1 bits (240), Expect = 9.510e-18 Identity = 118/377 (31.30%), Postives = 172/377 (45.62%), Query Frame = 1
Query: 124 SKVPPSHRSIVVVGLNGALQRTIVFKPPKGLHVGHVNRASSVGQGIGGKGQNVCVALRKLAEGGGCGXXXXGEVDVTLAHFAG-GKSGEAVCEDLSAMGVKL------VTSNTEAEMRLCTSLVDERFGETTEIIEPWSAEITKEEQQVLLTGCREAFGELP-SIHGLAVMGSSPAGVGKEALVDIMGAIAASRGFKGAETRVLVDSVVGFEALIDT--------------GHVSLLKVNAEEVISLAERGREGGEGEAGGGVSVWMEDKLAAAAVELFVRH---GDRLPWIAVTNGGLPSYLFSREFLVESGA---LSSF--WRVTPAPV-DAIN-------------PIGAGDAVAAATLYEWTRGVELPEAFRR 1122
++V V+VGLN A Q+ + P L G V+RA+S+ +GIGGKGQ+V +AL L+ G V LA F G G G+ V LS M + +T T+A++R CT++V TE++EP S I+ +E Q LL I GL VMGS P G + I + + LVDSVVG + L+ + KVN E+ LA + +GG + ++++ +A VE FV+ D L +IA+T+G P++L LV++ A SF W++ A + D I+ PIGAGD VAA TL W + LPE ++
Sbjct: 49 TRVEAYGTKTVIVGLNAAFQKRFILSPDTSLEPGSVHRAASLEEGIGGKGQDVAIALSCLSSAENSG--------VLLAQFLGKGAEGDQV---LSMMSQRCKGSGNDLTVRTQAKLRTCTTIVASDVA--TELVEP-SGTISSDEIQDLLDRISSVSKTQGLEIGGLCVMGSMPPGCQDDMYASIHSFLFPLDVDTEQQPLCLVDSVVGLKPLLHQMSSYRRSPSNQGGKRRGGMFKVNIAELCKLANIVKT-----SGGEANCATKEEIVSA-VEGFVQTYDAADALEYIAITDGKFPAHLVK---LVDNNANDESKSFRLWQLKIASLADFISQRDGTDQSPTLLYPIGAGDTVAAGTLAAWQY-LSLPEEHKK 401
BLAST of mRNA_S-firma_F_contig1099.1302.1 vs. uniprot
Match: A0A348XMI5_9BACT (PfkB domain-containing protein n=1 Tax=Lentisphaeria bacterium TaxID=2053569 RepID=A0A348XMI5_9BACT) HSP 1 Score: 93.6 bits (231), Expect = 2.370e-17 Identity = 99/335 (29.55%), Postives = 138/335 (41.19%), Query Frame = 1
Query: 151 IVVVGLNGALQRTIVFKPPKGLHVGHVNRASSVGQGIGGKGQNVCVALRKLAEGGGCGXXXXGEVDVTLAHFAGGKSGEAVCEDLSAMGVKLVTSNTEAEMRLCTSLVDERFGETTEIIEPWSAEITKEEQQVLLTGCREAFGELPSIHGLAVMGSSPAGVGKEALVDIMGAIAASRGFKGAETRVLVDSVVGFEALIDTGHVSLLKVNAEEVISLAERGREGGEGEAGGGVSVWMEDKLAAAAVELFVRHGDRLPWIAVTNGGLPSYLFSREFLVESGALSSFWRVTPAPVDAINPIGAGDAVAAATLYEWTRGVELPEAFRRALSVGGATCTS 1155
++ V N Q T+ F L +G VNRA + + GGKG + +A L G +AH GG+ G V L A+ + R+CT+LV+ + GE TE++EP S +T E + REA + GLA G+ P G+ + + F +T VL+D E L++TG V +LKVN EE+ L E L AA R G + W+ VT G ++L G +F P PV A NPIGAGD VA + G FR L+ A+C S
Sbjct: 6 LLTVSPNSGWQVTLEFPS---LTLGGVNRACARTERPGGKGSHFAMAANTLKPG-----------STAVAHCLGGEPGRRVRVALDALRTPQIVGAIAERTRICTTLVNVQKGEATELLEP-SPVVTVAEAERFEAAVREAAVRM---RGLAFCGTLPEGLPHDFYARVAN-------FAKPDTWVLLDGCRKVEDLLETGQVRILKVNEEELSELCETA------------------DLRKAADLCLERWG--IEWVGVTAGPEQAWLI--------GQNDTFSFKIP-PVQARNPIGAGDTVAGVMMRFLLDGGAPERPFRYGLAAASASCES 286
BLAST of mRNA_S-firma_F_contig1099.1302.1 vs. uniprot
Match: A0A7S3L2S6_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3L2S6_9STRA) HSP 1 Score: 90.9 bits (224), Expect = 7.730e-16 Identity = 131/422 (31.04%), Postives = 176/422 (41.71%), Query Frame = 1
Query: 148 SIVVVGLNGALQRTIVFKPPKGLHVGHVNRASSVGQGIGGKGQNVCVALRKLAEGGGCGXXXXGEVDVT--------------LAHFAG-GKSGEAVCEDLSAM--GVKLVTSNTEAEMRLCTSLVDERFGETTEIIEPWSAEITKEEQQVLLTGCRE--AFGELPSIHGLAVMGSSPAGVGKEALVDIMGAIAASRGFKGAETRVLVDSVVGFEALIDTGHVS-------------------------LLKVNAEEVISLAERGREGGEGEAGGGVSVWMEDKLAAAAVELFVRHGDR----LPWIAVTNGGLPSYLFSREFLVESGALSSFWRVTPAP-----VDAINPIGAGDAVAAATLYEWTRGVE-----LPEAFRRALSVGG----------ATCTSRDPVCNSCFSMEEANGLL 1209
S +VVGLN ALQR +V P L G V+R ++V GIGGKGQ+V VAL LA G XXXX L F G G SG+ + L V +T T + +R+CTSLV TTE++EP S I E Q L + + PS G A MGS P D I A K +VDS+VG AL++T H +LK+N +E+ +L +E E + G V D AV +F+ D+ L +A+TNG P+Y V S + ++V P P + PIGAGDAVAA TL W + LP+ R+ L + T S C + ++E N +L
Sbjct: 20 STLVVGLNPALQRRLVL--PGSLTPGDVHRITAVQTGIGGKGQDVAVALSCLASNGXXXXXXXXXXXXXXXXXXXXQLQQLPRLLQFLGQGASGDTLMGQLDPHVDRVSSLTIRTASPLRVCTSLVAP--DSTTELVEP-SGRIASAEMQELWHRLEQESSSSSSPSWDGCAFMGSLPP--------DCPSDIYAQLYDKLTPGLCVVDSLVGLPALLETIHQKQXXXXXXXXXXXXXXXKDSTSHGSVVLKINVDELCALVGLSKEEEEQKQQGDVD--DTDVTVFQAVSMFLDQFDKAATSLTAVALTNGPDPAY-------VASFPDQTLYKV-PVPQLQTTTTTLYPIGAGDAVAAGTLAAWQTLEQDASWVLPDTLRQLLLLSKQQEGPSVPSLVTAVSFGLACGTASCLQEENSVL 418
BLAST of mRNA_S-firma_F_contig1099.1302.1 vs. uniprot
Match: A0A0G4EE01_VITBC (PfkB domain-containing protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4EE01_VITBC) HSP 1 Score: 90.1 bits (222), Expect = 8.440e-16 Identity = 114/408 (27.94%), Postives = 180/408 (44.12%), Query Frame = 1
Query: 124 SKVPP-SHRSIVVVGLNGALQRTIVFKPPKGLHVGHVNRASSVGQGIGGKGQNVCVALRKLAEGGGCGXXXXGEVDVTLAHFAGGKSGEAVCEDLSAMGVKLVT---SNTEAEMRLCTSLV---DERFGET-------TEIIEPWSAEITKEEQQVLLTGCREAFGE---LPSIHGLAVMGSSPAGVGKEALVDIMGAIAASRGFKGA--ETRVLVDSVVGFEALIDTGHVSLLKVNAEEVISLAERGREGGEGEAGGGVSVWMEDKLAAAAVELFVRHGDRLPWIAVTNGGLPSYLFSREFLVESGALSS-----FWRVTPAPVDAI-NPIGAGDAVAAATLYE-----WTRGVELP-----EAFRRALSVGGATCTSRDPVCNSCFSMEEANGLLPDVRLEQIERD 1242
S+ PP + I+VVG+N A QRT++F+ GL +G VNRA V GGKGQ+ A+ +L G + L +SG+ +C LS + + T S+ EA R CT+L+ D +T TE+I+P S E+T E + +A + G+A+ G+ P G+ I+ A+AA+ G ET +++D+ G + V LK+N EE+ L G + + K + A L + +L +AVT GG + L+ + G+ SS F P D + NPIGAGD L E +TR E+ +AFR+ L+ A+C + F E+ + L+ + +++ D
Sbjct: 6 SRRPPLQEKCILVVGMNPAHQRTLIFERD-GLKLGRVNRAQRVITTFGGKGQHAAKAISQLHPG----------ACILL------QSGKDICAALSQLPLHQWTFWYSDAEAATRTCTTLIQLPDPSSPDTSRHKTVMTELIDP-SPELTAAEYDTIRNPVLDALSSGAVREGLRGVALCGTFPPGIPSALYEGIVQAVAANDAAAGGGTETVIVLDAWKGVLPCLSRQVVHTLKINEEELWDLC-----------GAALPDHLTIKTTSQAAALLIDKC-KLHAVAVTAGGKSAALYVSQREGGEGSASSVRLREFDFTLPDIEDRLKNPIGAGDTCTGVYLAELLTHPFTRLGEIDPQWIVDAFRKGLAAASASCLQWT---GASFEREDVDALMAQIAVKETAHD 380
BLAST of mRNA_S-firma_F_contig1099.1302.1 vs. uniprot
Match: A0A7S4BV26_CHRCT (Hypothetical protein (Fragment) n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4BV26_CHRCT) HSP 1 Score: 85.1 bits (209), Expect = 1.470e-15 Identity = 63/166 (37.95%), Postives = 90/166 (54.22%), Query Frame = 1
Query: 148 SIVVVGLNGALQRTIVFKPPKGLHVGHVNRASSVGQGIGGKGQNVCVALRKLAEGGGCGXXXXGEVDVTLAHFAGGKSGEAVCEDLSAMGVKLVTSNTEAEMRLCTSLVDERFGETTEIIEPWSAEITKEEQQVLLTGCREAFGELPSIHGLAVMGSSPAGVGKEA 645
S++VVG N ALQR V P L +G VNRA+S+ + +GGKGQ +AL + A G + TLA F GG +G AV LSA ++L+T T A R+CT+L+ TE+I+P S +++ E LL E L + LA+ G+ P+G + A
Sbjct: 5 SLLVVGPNPALQR--VLSLPTQLELGSVNRAASLSEYVGGKGQGAALALARWAPG-----------ETTLASFLGGDTGRAVEALLSASDLELLTQPTAAPTRICTTLLSPGVAGGTEVIDP-SGTVSEMELDALLGQIEE---RLHTFDALALCGTCPSGASQRA 153 The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig1099.1302.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-firma_F_contig1099.1302.1 >prot_S-firma_F_contig1099.1302.1 ID=prot_S-firma_F_contig1099.1302.1|Name=mRNA_S-firma_F_contig1099.1302.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=392bp MSALEAAGPGGAAEGSKVPPSHRSIVVVGLNGALQRTIVFKPPKGLHVGHback to top mRNA from alignment at S-firma_F_contig1099:5098..9191- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-firma_F_contig1099.1302.1 ID=mRNA_S-firma_F_contig1099.1302.1|Name=mRNA_S-firma_F_contig1099.1302.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=4094bp|location=Sequence derived from alignment at S-firma_F_contig1099:5098..9191- (Sphaerotrichia firma ET2_F female)back to top Coding sequence (CDS) from alignment at S-firma_F_contig1099:5098..9191- >mRNA_S-firma_F_contig1099.1302.1 ID=mRNA_S-firma_F_contig1099.1302.1|Name=mRNA_S-firma_F_contig1099.1302.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=2352bp|location=Sequence derived from alignment at S-firma_F_contig1099:5098..9191- (Sphaerotrichia firma ET2_F female)back to top |