mRNA_S-firma_F_contig10987.1299.1 (mRNA) Sphaerotrichia firma ET2_F female
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Overview
Homology
BLAST of mRNA_S-firma_F_contig10987.1299.1 vs. uniprot
Match: UPI0003F06857 (voltage-dependent calcium channel subunit alpha-2/delta-4-like n=1 Tax=Saccoglossus kowalevskii TaxID=10224 RepID=UPI0003F06857) HSP 1 Score: 141 bits (355), Expect = 3.110e-36 Identity = 90/238 (37.82%), Postives = 132/238 (55.46%), Query Frame = 1
Query: 1 QCCQVSLADLTVSSSFGGVAITTSYDCYREPSTTTFTSGSQVHVINTLRTPYEAQLATFPTTKWQYFGLESTGTFSIFPASEDADCYDYDPRLRPWYVLGASPEPKDVIIVMDVSGSMTATIEAGSTVTRLERAKEAARVVLDTLNPNDYVAVLTFSTSVDFPNTADLADCFADSMARATPQNVRALGDWLNTQTASGVTNYRPALEKAVSYLASA----GSGGEQFVVFLADGAPSD 702
+CCQ+++ DLT S+ FG I+ +Y C R T T + N + T + P KWQY+G E G +I+PA++ C YD R RPWYV SP PK+++IV+D SGSM G T+ +E AKE+ + VL TLNPND V+V++FS +V P + +CF + +A+ATP N+ L D+L + T Y AL + L ++ G +Q ++F+ DG P D
Sbjct: 96 ECCQLNVNDLTYSTRFGK-PISENYACERISPTVT---DDPERLSNDVVTVMKENNRQIPQIKWQYYGTEQ-GMMTIYPANKQNGCDIYDNRYRPWYVETKSPHPKNIVIVLDNSGSMRQN-HGGRTL--MEFAKESIKTVLYTLNPNDKVSVISFSDAVRLPIGSGRPECFGERLAQATPLNIDHLNDFLQSLPIDDSTKYLAALNTSFDLLIASRPTNGENRDQVILFVTDGKPDD 325
BLAST of mRNA_S-firma_F_contig10987.1299.1 vs. uniprot
Match: UPI001939F48A (VWFA and cache domain-containing protein 1-like n=1 Tax=Styela clava TaxID=7725 RepID=UPI001939F48A) HSP 1 Score: 142 bits (357), Expect = 5.130e-35 Identity = 88/236 (37.29%), Postives = 131/236 (55.51%), Query Frame = 1
Query: 1 QCCQVSLADLTVSSSFGGVAITTSYDCYREPSTTTFTSGSQVHVINTLRTPYEAQLATFPTTKWQYFGLESTGTFSIFPASEDADCYDYDPRLRPWYVLGASPEPKDVIIVMDVSGSMTATIEAGSTVTRLERAKEAARVVLDTLNPNDYVAVLTFSTSVDFPNTADLADCFADSMARATPQNVRALGDWLNTQTASGVTNYRPALEKAVSYLASAGS--GGEQFVVFLADGAPSD 702
+CC+++ ++LT+ F + S CY++ T SGS E + P+ KWQYFG E G +I+P + DC YDPRLRPWYV PEPKDV+I++D S SM ++ G T+ L+ AKEAA++V+ TLNP D VAV+ FS ++ CF + +A AT +N+ + ++++ + G T Y AL KA Y + S G E+ V+ +DG P+D
Sbjct: 118 ECCKLNASELTMDDRFKQ-PVEVSSACYQKAINTKAMSGSLT--AGKFEEVAEQNMRDTPSLKWQYFGSEK-GIMTIYPKAIKQDCDAYDPRLRPWYVKANVPEPKDVVILIDKSSSM-GSLYGGKTL--LDIAKEAAQIVVSTLNPRDRVAVIGFSDNLSLMGNEPDESCFENQLAAATHENIHEINEFIDEMSLEGSTMYGLALSKAFDYFENTESLAGRERVVILFSDGIPTD 346
BLAST of mRNA_S-firma_F_contig10987.1299.1 vs. uniprot
Match: UPI00089DC88F (VWFA and cache domain-containing protein 1-like isoform X1 n=2 Tax=Ciona intestinalis TaxID=7719 RepID=UPI00089DC88F) HSP 1 Score: 134 bits (336), Expect = 7.850e-34 Identity = 77/181 (42.54%), Postives = 111/181 (61.33%), Query Frame = 1
Query: 178 PTTKWQYFGLESTGTFSIFPASEDADCYDYDPRLRPWYVLGASPEPKDVIIVMDVSGSMTATIEAGSTVTRLERAKEAARVVLDTLNPNDYVAVLTFSTS-VDFPNTADLADCFADSMARATPQNVRALGDWLNTQTASGVTNYRPALEKAVSYL-----ASAGSGGEQFVVFLADGAPSD 702
P+ KWQYFG E G ++FP+ +C +D R RPWYV P+PK V+IV+D SGSM VT + AKEAA+ V++TLNP D AV+ FS+ V F +T CFA + A A+PQN + + D+++T ++ G TNY PAL+KA S+ S S ++ ++F++DG P+D
Sbjct: 158 PSLKWQYFGSEQ-GVTTLFPSLRATNCGSFDNRFRPWYVQANVPKPKQVVIVIDKSGSMG--------VTNMNLAKEAAKSVVNTLNPQDRFAVMAFSSIFVPFRSTVASDQCFATTFADASPQNKKKVEDFVDTISSGGGTNYAPALQKAFSFFQQEPSVSDPSEIDRVILFMSDGIPND 329
BLAST of mRNA_S-firma_F_contig10987.1299.1 vs. uniprot
Match: UPI001939370C (VWFA and cache domain-containing protein 1-like n=1 Tax=Styela clava TaxID=7725 RepID=UPI001939370C) HSP 1 Score: 137 bits (344), Expect = 2.810e-33 Identity = 85/236 (36.02%), Postives = 132/236 (55.93%), Query Frame = 1
Query: 1 QCCQVSLADLTVSSSFGGVAITTSYDCYREPSTTTFTSGSQVHVINTLRTPYEAQLATFPTTKWQYFGLESTGTFSIFPASEDADCYDYDPRLRPWYVLGASPEPKDVIIVMDVSGSMTATIEAGSTVTRLERAKEAARVVLDTLNPNDYVAVLTFSTSVDFPNTADLADCFADSMARATPQNVRALGDWLNTQTASGVTNYRPALEKAVSYLASAGS--GGEQFVVFLADGAPSD 702
+CC++++++LT+ F + S CY++ T SGS E + P+ KWQYFG E TG + +P + DC YDPR+RPWYV PEPKDV+I++D S SM ++ +G T+ L+ AKEAA++V++TLNP D AV+ FS ++ CF + +A AT +N + ++++ + G T Y AL KA Y + S G E+ ++ +DG P+D
Sbjct: 118 ECCKMNVSELTMDDRFKQ-PVEMSSSCYQKSINTKRMSGSLKP--GKFDEVAEKNIRDSPSLKWQYFGSE-TGIMTTYPKAMKKDCDSYDPRVRPWYVKANVPEPKDVVILIDKSNSM-GSLYSGKTL--LDIAKEAAQIVVNTLNPRDRAAVIGFSDNLSLMGNEPDESCFENQLAVATHENTHEINEFIDEISLGGSTMYGMALSKAFDYFENTESLAGRERVIILFSDGIPTD 346
BLAST of mRNA_S-firma_F_contig10987.1299.1 vs. uniprot
Match: UPI0003F0CA8B (VWFA and cache domain-containing protein 1-like n=1 Tax=Saccoglossus kowalevskii TaxID=10224 RepID=UPI0003F0CA8B) HSP 1 Score: 137 bits (344), Expect = 2.870e-33 Identity = 77/176 (43.75%), Postives = 109/176 (61.93%), Query Frame = 1
Query: 187 KWQYFGLESTGTFSIFPASEDADCYDYDPRLRPWYVLGASPEPKDVIIVMDVSGSMTATIEAGSTVTRLERAKEAARVVLDTLNPNDYVAVLTFSTSVDFPNT-ADLADCFADSMARATPQNVRALGDWLNTQTASGVTNYRPALEKAVSYLASAGSGGE---QFVVFLADGAPSD 702
+WQ++G E G F+I+PA+ +DC DYD R RPWYV A+ +PK+V+I++D SGSM+ ++ G T +E AKEAA VLDT+NPND V+V+ FST + P + CF D +A ATP N+ L ++++ TNY AL A L + S E Q ++FL DG P+D
Sbjct: 166 QWQFYGSEE-GVFTIYPANSRSDCNDYDARYRPWYVETATSDPKNVVILIDNSGSMSHSLSDGRTF--METAKEAANTVLDTMNPNDKVSVIAFSTELRRPGEDSGSLSCFKDQLAEATPPNIDYLKSFVHSIPTEDNTNYIGALNAAFDLLKGSMSTDENRKQVILFLTDGQPTD 338
BLAST of mRNA_S-firma_F_contig10987.1299.1 vs. uniprot
Match: UPI0003F0BCF0 (VWFA and cache domain-containing protein 1-like n=1 Tax=Saccoglossus kowalevskii TaxID=10224 RepID=UPI0003F0BCF0) HSP 1 Score: 136 bits (342), Expect = 5.150e-33 Identity = 82/196 (41.84%), Postives = 116/196 (59.18%), Query Frame = 1
Query: 130 VINTLRTPYEAQLATFPTTKWQYFGLESTGTFSIFPASEDADCYDYDPRLRPWYVLGASPEPKDVIIVMDVSGSMTATIEAGSTVTRLERAKEAARVVLDTLNPNDYVAVLTFSTSVDFPNTADLADCFADSMARATPQNVRALGDWLNTQTASGVTNYRPALEKAV-----SYLASAGSGGEQFVVFLADGAPSD 702
VI+ ++ Y + F KWQYFG E G F+I+PAS DC +YD R RPWYV A+PEPK+V+IV+D SGSM A + +G ++ + A +AA VLDT+NPND V V+ FS + P A C+A+ +A AT N++ L ++ + A G T+Y A + A SY A + +Q ++FL DG P D
Sbjct: 149 VIDVMKENYNS----FSNLKWQYFGSEE-GIFTIYPASLIDDCANYDHRFRPWYVEAATPEPKNVVIVIDTSGSM-ANLHSGKSLINI--AIDAAITVLDTMNPNDKVGVIAFSDELKLPPKIGDASCYANELALATTINIQNLKQFVLSLVARGGTHYGKAFDAAFNLLKESYTLDADNERDQVIIFLTDGEPLD 336
BLAST of mRNA_S-firma_F_contig10987.1299.1 vs. uniprot
Match: UPI00089DB3E7 (VWFA and cache domain-containing protein 1-like n=1 Tax=Ciona intestinalis TaxID=7719 RepID=UPI00089DB3E7) HSP 1 Score: 135 bits (340), Expect = 9.800e-33 Identity = 77/181 (42.54%), Postives = 111/181 (61.33%), Query Frame = 1
Query: 178 PTTKWQYFGLESTGTFSIFPASEDADCYDYDPRLRPWYVLGASPEPKDVIIVMDVSGSMTATIEAGSTVTRLERAKEAARVVLDTLNPNDYVAVLTFSTS-VDFPNTADLADCFADSMARATPQNVRALGDWLNTQTASGVTNYRPALEKAVSYL-----ASAGSGGEQFVVFLADGAPSD 702
P+ KWQYFG E G ++FP+ DC +D R RPWYV P+PK ++IV+D SGSM VT + AKEAA+ V++TLNP D AV+ FS+ V F +T CFA + A A+PQN + + D+++T ++ G TNY PAL+KA S+ S S ++ ++F++DG P+D
Sbjct: 158 PSLKWQYFGSEQ-GVTTLFPSLRATDCGSFDNRCRPWYVQANVPKPKQIVIVIDKSGSMG--------VTNMNLAKEAAKSVVNTLNPQDRFAVMAFSSIFVPFQSTVASDQCFATTFADASPQNKKKVEDFVDTISSGGGTNYAPALQKAFSFFQQEPSVSDPSEIDRVILFMSDGIPND 329
BLAST of mRNA_S-firma_F_contig10987.1299.1 vs. uniprot
Match: UPI000F552F3D (VWFA and cache domain-containing protein 1-like n=1 Tax=Pocillopora damicornis TaxID=46731 RepID=UPI000F552F3D) HSP 1 Score: 132 bits (333), Expect = 8.640e-32 Identity = 75/184 (40.76%), Postives = 107/184 (58.15%), Query Frame = 1
Query: 172 TFPTTKWQYFGLESTGTFSIFPASEDA-DCYDYDPRLRPWYVLGASPEPKDVIIVMDVSGSMTATIEAGSTVTRLERAKEAARVVLDTLNPNDYVAVLTFSTSVDFP-NTADLADCFADSMARATPQNVRALGDWLNTQTASGVTNYRPALEKAVSYLASAGSGG-----EQFVVFLADGAPSD 702
T+P KWQYFG E G + FP +D DC +DPR RPWYV A+ E KDV++V+D+S SMT +L AKEAA+ VLDT+NP D V V++F T P +T C+ + +A+A P N++ + ++ G++ Y+PA EKA S + SG ++ ++FL DG PSD
Sbjct: 172 TYPFIKWQYFGSEQ-GVMTTFPVYDDKEDCGRFDPRFRPWYVETATHEAKDVVLVIDISASMTGE--------KLHAAKEAAKTVLDTMNPKDQVGVVSFCTVASTPGDTGGKIPCYTERLAQAVPINIKKMKYYVEGLVPHGLSQYKPAFEKAFSLFKGSVSGESGKKKKRVILFLTDGKPSD 346
BLAST of mRNA_S-firma_F_contig10987.1299.1 vs. uniprot
Match: A0A3M6UTR6_POCDA (Uncharacterized protein n=1 Tax=Pocillopora damicornis TaxID=46731 RepID=A0A3M6UTR6_POCDA) HSP 1 Score: 132 bits (333), Expect = 9.220e-32 Identity = 75/184 (40.76%), Postives = 107/184 (58.15%), Query Frame = 1
Query: 172 TFPTTKWQYFGLESTGTFSIFPASEDA-DCYDYDPRLRPWYVLGASPEPKDVIIVMDVSGSMTATIEAGSTVTRLERAKEAARVVLDTLNPNDYVAVLTFSTSVDFP-NTADLADCFADSMARATPQNVRALGDWLNTQTASGVTNYRPALEKAVSYLASAGSGG-----EQFVVFLADGAPSD 702
T+P KWQYFG E G + FP +D DC +DPR RPWYV A+ E KDV++V+D+S SMT +L AKEAA+ VLDT+NP D V V++F T P +T C+ + +A+A P N++ + ++ G++ Y+PA EKA S + SG ++ ++FL DG PSD
Sbjct: 172 TYPFIKWQYFGSEQ-GVMTTFPVYDDKEDCGRFDPRFRPWYVETATHEAKDVVLVIDISASMTGE--------KLHAAKEAAKTVLDTMNPKDQVGVVSFCTVASTPGDTGGKIPCYTERLAQAVPINIKKMKYYVEGLVPHGLSQYKPAFEKAFSLFKGSVSGESGKKKKRVILFLTDGKPSD 346
BLAST of mRNA_S-firma_F_contig10987.1299.1 vs. uniprot
Match: UPI0013901467 (VWFA and cache domain-containing protein 1 isoform X1 n=2 Tax=Nematostella vectensis TaxID=45351 RepID=UPI0013901467) HSP 1 Score: 132 bits (331), Expect = 1.550e-31 Identity = 84/238 (35.29%), Postives = 127/238 (53.36%), Query Frame = 1
Query: 1 QCCQVSLADLTVSSSFGGVAITTSYDCYREPSTTTFTSGSQVHVINTLRTPYEAQLATFPTTKWQYFGLESTGTFSIFPASEDADCYDYDPRLRPWYVLGASPEPKDVIIVMDVSGSMTATIEAGSTVTRLERAKEAARVVLDTLNPNDYVAVLTFSTSVDFPNTADLADCFADSMARATPQNVRALGDWLNTQTASGVTNYRPALEKAVSYLASAGSGG----EQFVVFLADGAPSD 702
+CC V LT + F TT + C R+ S T + + N + E + P KWQYFG G +I+P A+C YD R RPWYV A+P+PK+V++V+D SGSM A T L+ A +AA+ VLDTLNP D V V++ +T + P + D C+A+++A A N+ + +L+ ++G T Y PAL KA + L ++ +Q ++FL D P++
Sbjct: 106 ECCSVDSGSLTYDTRFRQQVRTTQF-CVRKASGAT----NPTQLTNEVLKAMEDNMKESPYLKWQYFGSVE-GLTTIYPMQSQAECGSYDNRARPWYVDAAAPKPKNVVLVVDSSGSMAEKHTANGK-TWLQMAIDAAKAVLDTLNPRDKVGVVSLATDANTPGSNDTTWCYANTLAEANSVNINNMKIFLDGMRSAGFTMYIPALTKAFALLLNSKPESPDDCDQVIIFLTDAKPTE 336 The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10987.1299.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-firma_F_contig10987.1299.1 >prot_S-firma_F_contig10987.1299.1 ID=prot_S-firma_F_contig10987.1299.1|Name=mRNA_S-firma_F_contig10987.1299.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=234bp QCCQVSLADLTVSSSFGGVAITTSYDCYREPSTTTFTSGSQVHVINTLRTback to top mRNA from alignment at S-firma_F_contig10987:2779..3548+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-firma_F_contig10987.1299.1 ID=mRNA_S-firma_F_contig10987.1299.1|Name=mRNA_S-firma_F_contig10987.1299.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=770bp|location=Sequence derived from alignment at S-firma_F_contig10987:2779..3548+ (Sphaerotrichia firma ET2_F female)back to top Coding sequence (CDS) from alignment at S-firma_F_contig10987:2779..3548+ >mRNA_S-firma_F_contig10987.1299.1 ID=mRNA_S-firma_F_contig10987.1299.1|Name=mRNA_S-firma_F_contig10987.1299.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=1404bp|location=Sequence derived from alignment at S-firma_F_contig10987:2779..3548+ (Sphaerotrichia firma ET2_F female)back to top |