mRNA_S-firma_F_contig10977.1288.1 (mRNA) Sphaerotrichia firma ET2_F female
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Overview
Homology
BLAST of mRNA_S-firma_F_contig10977.1288.1 vs. uniprot
Match: F0ZH91_DICPU (Uncharacterized protein ABCH2 n=1 Tax=Dictyostelium purpureum TaxID=5786 RepID=F0ZH91_DICPU) HSP 1 Score: 301 bits (771), Expect = 1.200e-98 Identity = 149/224 (66.52%), Postives = 188/224 (83.93%), Query Frame = 1
Query: 1 EGVPALRGVSLNVMRGEFVCILGKSGGGKTTMLNMMGTIDKPSRGEVFVAGTRITRHTTDRELADLRLNRLGFVFQSFNLLPTMTAMENVQMPMVLAGLLSRSERRSRARMLLSRVGMGHREDHYPSQLSGGEQQRVTIARALANHPEVLLLDEPTGDLDSKNSDIVMKLLTDLNRKERVTLIMVTHDVHLKRFANRVVRMVDGKINRIETVPDHVRAEAFETL 672
EGVPALRGVS+ + RGEF+CI G SGGGKTTMLN++GTIDKP++GE+ + G I T+D++LA LRL +GFVFQ+FNLL ++TA+ENV+MPM+L G LS SERR RA LL++VGM R DH+PSQLSGGEQQRVTIARA+AN+P+VLLLDEPTGDLD+ N+ I+MKLLTDLN+KE +TL+MVTHDV LK +++R++ M DGKI RIETVP+H + E F+ L
Sbjct: 13 EGVPALRGVSMTIKRGEFICIFGTSGGGKTTMLNIIGTIDKPTKGEMKLCGKLINHKTSDKDLAFLRLKNIGFVFQTFNLLSSLTALENVEMPMILLGELSASERRERAISLLTKVGMKDRLDHFPSQLSGGEQQRVTIARAIANNPDVLLLDEPTGDLDTVNTAIIMKLLTDLNKKENITLVMVTHDVGLKMYSDRIIWMRDGKIQRIETVPEHSKKEHFQKL 236
BLAST of mRNA_S-firma_F_contig10977.1288.1 vs. uniprot
Match: A0A8J4V1S8_9MYCE (ABC transporter domain-containing protein n=1 Tax=Polysphondylium violaceum TaxID=133409 RepID=A0A8J4V1S8_9MYCE) HSP 1 Score: 294 bits (753), Expect = 2.530e-95 Identity = 145/224 (64.73%), Postives = 186/224 (83.04%), Query Frame = 1
Query: 1 EGVPALRGVSLNVMRGEFVCILGKSGGGKTTMLNMMGTIDKPSRGEVFVAGTRITRHTTDRELADLRLNRLGFVFQSFNLLPTMTAMENVQMPMVLAGLLSRSERRSRARMLLSRVGMGHREDHYPSQLSGGEQQRVTIARALANHPEVLLLDEPTGDLDSKNSDIVMKLLTDLNRKERVTLIMVTHDVHLKRFANRVVRMVDGKINRIETVPDHVRAEAFETL 672
EGVPALRGVS+++ RGEF+CI G SGGGKTTMLN++GTIDKP++G++ + G I TTD++LA LRL +GFVFQ+FNLL ++TA+ENV+MPM+L G LS SERR RA LL++VGM R DH+PSQLSGGEQQRVTIARA+AN+P++LLLDEPTGDLD+ N+ I+MKLLTDLN+ E +TL+MVTHDV LK +++R++ M DGKI RIETVP + + F+ L
Sbjct: 50 EGVPALRGVSMSIKRGEFICIFGTSGGGKTTMLNIIGTIDKPTKGDMKLCGKMINHKTTDKDLAFLRLKNIGFVFQTFNLLSSLTALENVEMPMILLGELSASERRERAISLLTKVGMKDRLDHFPSQLSGGEQQRVTIARAIANNPDILLLDEPTGDLDTVNTSIIMKLLTDLNKNENITLVMVTHDVGLKMYSDRIIWMRDGKIQRIETVPLKSKEDQFQKL 273
BLAST of mRNA_S-firma_F_contig10977.1288.1 vs. uniprot
Match: A0A152A2G6_9MYCE (Putative non-transporter ABC protein n=1 Tax=Tieghemostelium lacteum TaxID=361077 RepID=A0A152A2G6_9MYCE) HSP 1 Score: 295 bits (754), Expect = 6.040e-95 Identity = 148/224 (66.07%), Postives = 185/224 (82.59%), Query Frame = 1
Query: 1 EGVPALRGVSLNVMRGEFVCILGKSGGGKTTMLNMMGTIDKPSRGEVFVAGTRITRHTTDRELADLRLNRLGFVFQSFNLLPTMTAMENVQMPMVLAGLLSRSERRSRARMLLSRVGMGHREDHYPSQLSGGEQQRVTIARALANHPEVLLLDEPTGDLDSKNSDIVMKLLTDLNRKERVTLIMVTHDVHLKRFANRVVRMVDGKINRIETVPDHVRAEAFETL 672
EGVPALRGV++++ RGEFVCI G SGGGKTTMLN++GTIDKP++G++ + G I TTD++LA LRL +GFVFQ+FNLL ++TA+ENV+MPM+L G LS SERR RA LL++VGM R DH+PSQLSGGEQQRVTIARA+AN PEVLLLDEPTGDLD+ N+ I+MKLLTDLN+ E +TL+MVTHDV LK +++R++ M DGKI RIETV +A+ FE L
Sbjct: 49 EGVPALRGVTMSIKRGEFVCIFGTSGGGKTTMLNIIGTIDKPTKGDMKLCGKMINHKTTDKDLAFLRLKHIGFVFQTFNLLSSLTALENVEMPMILLGELSASERRERAISLLTKVGMKDRLDHFPSQLSGGEQQRVTIARAIANSPEVLLLDEPTGDLDTVNTSIIMKLLTDLNKTENITLVMVTHDVGLKMYSDRIIWMRDGKIQRIETVSKSKQADQFEKL 272
BLAST of mRNA_S-firma_F_contig10977.1288.1 vs. uniprot
Match: ABCH2_DICDI (ABC transporter H family member 2 n=1 Tax=Dictyostelium discoideum TaxID=44689 RepID=ABCH2_DICDI) HSP 1 Score: 294 bits (753), Expect = 1.770e-94 Identity = 146/224 (65.18%), Postives = 186/224 (83.04%), Query Frame = 1
Query: 1 EGVPALRGVSLNVMRGEFVCILGKSGGGKTTMLNMMGTIDKPSRGEVFVAGTRITRHTTDRELADLRLNRLGFVFQSFNLLPTMTAMENVQMPMVLAGLLSRSERRSRARMLLSRVGMGHREDHYPSQLSGGEQQRVTIARALANHPEVLLLDEPTGDLDSKNSDIVMKLLTDLNRKERVTLIMVTHDVHLKRFANRVVRMVDGKINRIETVPDHVRAEAFETL 672
EGVPALRGVS+ + RGEF+CI G SGGGKTTMLN++GTIDKP++GE+ + G I TTD++LA LRL +GFVFQ+FNLL ++TA+ENV+MPM+L G LS SERR RA LL++VGM R DH+PSQLSGGEQQRVTIARA+AN+P+VLLLDEPTGDLD+ N+ ++MKLLTDLN++E +TLIMVTHDV LK +++R++ M DGKI RIETV + + E ++ L
Sbjct: 53 EGVPALRGVSMAIKRGEFICIFGTSGGGKTTMLNIIGTIDKPTKGEMKLCGKTINHKTTDKDLAFLRLRNIGFVFQTFNLLSSLTALENVEMPMILLGELSASERRERAISLLTKVGMKDRLDHFPSQLSGGEQQRVTIARAIANNPDVLLLDEPTGDLDTVNTSVIMKLLTDLNKQENITLIMVTHDVGLKMYSDRIIWMRDGKIQRIETVQEQSKREHYQKL 276
BLAST of mRNA_S-firma_F_contig10977.1288.1 vs. uniprot
Match: J9HMS6_9SPIT (Non-transporter ABC protein n=1 Tax=Oxytricha trifallax TaxID=1172189 RepID=J9HMS6_9SPIT) HSP 1 Score: 289 bits (739), Expect = 1.870e-93 Identity = 142/225 (63.11%), Postives = 185/225 (82.22%), Query Frame = 1
Query: 1 EGVPALRGVSLNVMRGEFVCILGKSGGGKTTMLNMMGTIDKPSRGEVFVAGTRITRHTTDRELADLRLNRLGFVFQSFNLLPTMTAMENVQMPMVLAGLLSRSERRSRARMLLSRVGMGHREDHYPSQLSGGEQQRVTIARALANHPEVLLLDEPTGDLDSKNSDIVMKLLTDLNRKERVTLIMVTHDVHLKRFANRVVRMVDGKINRIETVPDHVRAEAFETLN 675
EGVPALRGV+L + GEF+ ILG SGGGKTT+LN++GTIDKPS+G+V++ G RI T D+ LA +RLN+LGFVFQ+FNL+ ++TA+ENV++PM L G LSR + R RA LL V +G R DH+P+QLSGGEQQRVTIARA+AN+P ++LLDEPTGDLD++++DIVMK+L DLN K+++T+IMVTHDV LK FANRVVRM DGK+N+IE + +R+EA L+
Sbjct: 124 EGVPALRGVNLTINDGEFITILGTSGGGKTTLLNIIGTIDKPSKGDVYICGLRIKYSTKDQLLASIRLNKLGFVFQTFNLIGSLTALENVELPMQLRGKLSREQIRKRAVSLLEEVSLGSRMDHFPNQLSGGEQQRVTIARAIANNPSIILLDEPTGDLDTRSTDIVMKILLDLNVKKKITMIMVTHDVGLKAFANRVVRMADGKVNKIEEIDPSIRSEAVRHLD 348
BLAST of mRNA_S-firma_F_contig10977.1288.1 vs. uniprot
Match: UPI0006449C52 (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI0006449C52) HSP 1 Score: 290 bits (742), Expect = 1.890e-93 Identity = 146/225 (64.89%), Postives = 184/225 (81.78%), Query Frame = 1
Query: 1 EGVPALRGVSLNVMRGEFVCILGKSGGGKTTMLNMMGTIDKPSRGEVFVAGTRITRHTTDRELADLRLNRLGFVFQSFNLLPTMTAMENVQMPMVLAGLLSRSERRSRARMLLSRVGMGHREDHYPSQLSGGEQQRVTIARALANHPEVLLLDEPTGDLDSKNSDIVMKLLTDLNRKERVTLIMVTHDVHLKRFANRVVRMVDGKINRIETVPDHVRAEAFETLN 675
EGVPALRGV++ + RGEFVCI G SGGGKTTMLN++GTIDKP++G++ + G I TTD++LA +RL +GFVFQ+FNLL ++TA+ENV+MPM+L G LS ERR RA LL++VGM R DH PSQLSGGEQQRVTIARA+AN+P++LLLDEPTGDLD+ N+ IVMKLLTDLNR E +TL+MVTHDV LK +A+RV+ M DGKI RIETV ++ ++F L+
Sbjct: 48 EGVPALRGVTMTIKRGEFVCIFGTSGGGKTTMLNLIGTIDKPTKGDMRLCGKVINHKTTDKDLAYIRLKNIGFVFQTFNLLSSLTALENVEMPMILLGELSAQERRERAISLLTKVGMKDRLDHVPSQLSGGEQQRVTIARAMANNPDILLLDEPTGDLDTVNTSIVMKLLTDLNRDENITLVMVTHDVGLKAYADRVIWMRDGKIQRIETVSLDLKKDSFSRLH 272
BLAST of mRNA_S-firma_F_contig10977.1288.1 vs. uniprot
Match: D3B0C5_POLPP (Putative non-transporter ABC protein n=1 Tax=Polysphondylium pallidum (strain ATCC 26659 / Pp 5 / PN500) TaxID=670386 RepID=D3B0C5_POLPP) HSP 1 Score: 289 bits (740), Expect = 4.020e-93 Identity = 143/225 (63.56%), Postives = 183/225 (81.33%), Query Frame = 1
Query: 1 EGVPALRGVSLNVMRGEFVCILGKSGGGKTTMLNMMGTIDKPSRGEVFVAGTRITRHTTDRELADLRLNRLGFVFQSFNLLPTMTAMENVQMPMVLAGLLSRSERRSRARMLLSRVGMGHREDHYPSQLSGGEQQRVTIARALANHPEVLLLDEPTGDLDSKNSDIVMKLLTDLNRKERVTLIMVTHDVHLKRFANRVVRMVDGKINRIETVPDHVRAEAFETLN 675
EGVPALRGV++N+ RGEFVCI G SGGGKTTMLN++GTIDKP++G++ + G I TTD++LA +RL +GFVFQ+FNLL ++TA+ENV+MPM+L G LS +ERR RA LL++VGM R DH PSQLSGGEQQRVTIARA+AN+P++LLLDEPTGDLD+ N+ +VMKLLTDLN+ E +TL+MVTHDV LK +A+R++ M DGKI R E+V R E + L+
Sbjct: 50 EGVPALRGVTMNIKRGEFVCIFGTSGGGKTTMLNLIGTIDKPTKGDMKLCGKMINHKTTDKDLAYIRLKNIGFVFQTFNLLSSLTALENVEMPMILLGELSATERRERAISLLTKVGMKDRLDHIPSQLSGGEQQRVTIARAMANNPDILLLDEPTGDLDTVNTSVVMKLLTDLNKNENITLVMVTHDVGLKMYADRIIWMRDGKIQRFESVQTDARREHYARLD 274
BLAST of mRNA_S-firma_F_contig10977.1288.1 vs. uniprot
Match: A0A7S3LRT4_9EUKA (Hypothetical protein n=1 Tax=Palpitomonas bilix TaxID=652834 RepID=A0A7S3LRT4_9EUKA) HSP 1 Score: 285 bits (730), Expect = 6.270e-93 Identity = 140/224 (62.50%), Postives = 187/224 (83.48%), Query Frame = 1
Query: 1 EGVPALRGVSLNVMRGEFVCILGKSGGGKTTMLNMMGTIDKPSRGEVFVAGTRITRHTTDRELADLRLNRLGFVFQSFNLLPTMTAMENVQMPMVLAGLLSRSERRSRARMLLSRVGMGHREDHYPSQLSGGEQQRVTIARALANHPEVLLLDEPTGDLDSKNSDIVMKLLTDLNRKERVTLIMVTHDVHLKRFANRVVRMVDGKINRIETVPDHVRAEAFETL 672
EGVPALRGV+L++ RG+FV +LG+SGGGKT++LN++GTIDKP++GE+ + GTR+T T+D+ LA +RL +LGFVFQ+FNLL +MTA+ENV+MPM+L LS +ERR+RA+ LL++VG+ HR H PSQLSGGEQQRVTIAR++AN PE+LLLDEPTGDLD+ N++IVM +L +LN + ++T+IMVTHDV+LK FAN+VV M DGKI RIE + + R +A L
Sbjct: 64 EGVPALRGVTLDIKRGDFVVLLGQSGGGKTSLLNIIGTIDKPTKGEIVICGTRVTSRTSDKTLAYIRLAKLGFVFQTFNLLSSMTALENVEMPMILKASLSPAERRARAKKLLTKVGLQHRWGHVPSQLSGGEQQRVTIARSIANEPEMLLLDEPTGDLDTANTEIVMNMLVELNMQNKITMIMVTHDVNLKYFANKVVHMRDGKIARIEYIEEERRKQAVAEL 287
BLAST of mRNA_S-firma_F_contig10977.1288.1 vs. uniprot
Match: F4Q889_CAVFA (Putative non-transporter ABC protein n=1 Tax=Cavenderia fasciculata (strain SH3) TaxID=1054147 RepID=F4Q889_CAVFA) HSP 1 Score: 288 bits (737), Expect = 2.590e-92 Identity = 147/224 (65.62%), Postives = 183/224 (81.70%), Query Frame = 1
Query: 1 EGVPALRGVSLNVMRGEFVCILGKSGGGKTTMLNMMGTIDKPSRGEVFVAGTRITRHTTDRELADLRLNRLGFVFQSFNLLPTMTAMENVQMPMVLAGLLSRSERRSRARMLLSRVGMGHREDHYPSQLSGGEQQRVTIARALANHPEVLLLDEPTGDLDSKNSDIVMKLLTDLNRKERVTLIMVTHDVHLKRFANRVVRMVDGKINRIETVPDHVRAEAFETL 672
EGVPALRGVS+ + RG+FVCI G SGGGKTTMLN++GTIDKP++G++ + G I TTD++LA LRL +GFVFQ+FNLL ++TA+ENV+MPM+L G L+ +ERR RA LL++VGM R DH PSQLSGGEQQRVTIARA+AN+P++LLLDEPTGDLD+ N+ IVMKLLTDLNR + VTL+MVTHDV LK +++RV+ M DGKI RIETV + E FE L
Sbjct: 50 EGVPALRGVSMCIKRGDFVCIFGTSGGGKTTMLNIIGTIDKPTKGDMKLCGKTINHKTTDKDLAFLRLKNIGFVFQTFNLLSSLTALENVEMPMILLGELNAAERRERAISLLTKVGMKDRVDHVPSQLSGGEQQRVTIARAMANNPDILLLDEPTGDLDTVNTSIVMKLLTDLNRNDGVTLVMVTHDVGLKMYSDRVIWMRDGKIQRIETVNPLSKKEQFEKL 273
BLAST of mRNA_S-firma_F_contig10977.1288.1 vs. uniprot
Match: A0A8J8NZS6_HALGN (ABC transporter domain-containing protein n=1 Tax=Halteria grandinella TaxID=5974 RepID=A0A8J8NZS6_HALGN) HSP 1 Score: 284 bits (726), Expect = 4.550e-92 Identity = 140/225 (62.22%), Postives = 185/225 (82.22%), Query Frame = 1
Query: 1 EGVPALRGVSLNVMRGEFVCILGKSGGGKTTMLNMMGTIDKPSRGEVFVAGTRITRHTTDRELADLRLNRLGFVFQSFNLLPTMTAMENVQMPMVLAGLLSRSERRSRARMLLSRVGMGHREDHYPSQLSGGEQQRVTIARALANHPEVLLLDEPTGDLDSKNSDIVMKLLTDLNRKERVTLIMVTHDVHLKRFANRVVRMVDGKINRIETVPDHVRAEAFETLN 675
EGVPALRGV+L++ GEF+ ILG SGGGKTTMLN++GTIDKPS+G+V++ G RI T D+ LA +RLN+LGFVFQ+FNL+ ++TA+ENV++PM L G LSR + R RA LL VG+G R DH+P+QLSGGEQQRVTIARA++N+P +LLLDEPTGDLD++++DIVMK+L DL +++++T+IMVTHDV LK FANRVVRM DGKI +IE + +R + + L+
Sbjct: 82 EGVPALRGVNLSIKAGEFITILGTSGGGKTTMLNIIGTIDKPSKGDVYICGLRIKYSTKDQLLASIRLNKLGFVFQTFNLIGSLTALENVELPMQLRGKLSRDQVRKRAVALLEEVGLGSRLDHFPNQLSGGEQQRVTIARAISNNPSILLLDEPTGDLDTRSTDIVMKILVDLCQQKKITMIMVTHDVSLKSFANRVVRMADGKIAKIEEIDPSIRDDMIKHLS 306 The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10977.1288.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-firma_F_contig10977.1288.1 >prot_S-firma_F_contig10977.1288.1 ID=prot_S-firma_F_contig10977.1288.1|Name=mRNA_S-firma_F_contig10977.1288.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=225bp EGVPALRGVSLNVMRGEFVCILGKSGGGKTTMLNMMGTIDKPSRGEVFVAback to top mRNA from alignment at S-firma_F_contig10977:2606..3458+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-firma_F_contig10977.1288.1 ID=mRNA_S-firma_F_contig10977.1288.1|Name=mRNA_S-firma_F_contig10977.1288.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=853bp|location=Sequence derived from alignment at S-firma_F_contig10977:2606..3458+ (Sphaerotrichia firma ET2_F female)back to top Coding sequence (CDS) from alignment at S-firma_F_contig10977:2606..3458+ >mRNA_S-firma_F_contig10977.1288.1 ID=mRNA_S-firma_F_contig10977.1288.1|Name=mRNA_S-firma_F_contig10977.1288.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=1350bp|location=Sequence derived from alignment at S-firma_F_contig10977:2606..3458+ (Sphaerotrichia firma ET2_F female)back to top |