mRNA_S-firma_F_contig10973.1287.1 (mRNA) Sphaerotrichia firma ET2_F female
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Overview
Homology
BLAST of mRNA_S-firma_F_contig10973.1287.1 vs. uniprot
Match: D7FPW3_ECTSI (2-hydroxy-3-oxopropionate reductase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FPW3_ECTSI) HSP 1 Score: 141 bits (355), Expect = 5.380e-38 Identity = 71/75 (94.67%), Postives = 74/75 (98.67%), Query Frame = 3
Query: 45 MAETIGFIGLGIMGQGMASNLAKAGAKVVVWNRSEGKRSAFVAEHEGCSAVATPKEVVEACELTYLMLSDLEASK 269
MAET+GFIGLGIMGQGMASNLAKAGAKVVVWNRSEGKRSAFVAEHEGCSA A+PKEVVE+CELTYLMLSDLEASK
Sbjct: 1 MAETVGFIGLGIMGQGMASNLAKAGAKVVVWNRSEGKRSAFVAEHEGCSAAASPKEVVESCELTYLMLSDLEASK 75
BLAST of mRNA_S-firma_F_contig10973.1287.1 vs. uniprot
Match: D7FQJ3_ECTSI (Gamma hydroxybutyrate dehydrogenase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQJ3_ECTSI) HSP 1 Score: 83.6 bits (205), Expect = 9.390e-16 Identity = 43/72 (59.72%), Postives = 51/72 (70.83%), Query Frame = 3
Query: 51 ETIGFIGLGIMGQGMASNLAKAGAKVVVWNRSEGKRSAFVAEHEGCSAVATPKEVVEACELTYLMLSDLEAS 266
E +GFIGLGIMG GMASNL K G V+VWNR+ K + F ++ GC ATPKEVVE C +TY MLS EA+
Sbjct: 52 EKVGFIGLGIMGTGMASNLIKGGRDVIVWNRTASKAADF-SKRTGCETAATPKEVVEQCSITYSMLSTPEAA 122
BLAST of mRNA_S-firma_F_contig10973.1287.1 vs. uniprot
Match: A0A7S2XW24_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XW24_9STRA) HSP 1 Score: 82.0 bits (201), Expect = 1.950e-15 Identity = 41/71 (57.75%), Postives = 51/71 (71.83%), Query Frame = 3
Query: 57 IGFIGLGIMGQGMASNLAKAGAKVVVWNRSEGKRSAFVAEHEGCSAVATPKEVVEACELTYLMLSDLEASK 269
+GF+G+GIMG+GMA NL KAG ++VWNR K +F AE G + TPKEVVE+C LTY MLS LEA +
Sbjct: 7 VGFVGIGIMGRGMALNLTKAGRTLIVWNRDTTKAESFAAEF-GATVAKTPKEVVESCTLTYCMLSTLEADR 76
BLAST of mRNA_S-firma_F_contig10973.1287.1 vs. uniprot
Match: A0A6V1X3J8_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1X3J8_HETAK) HSP 1 Score: 81.3 bits (199), Expect = 3.660e-15 Identity = 46/74 (62.16%), Postives = 51/74 (68.92%), Query Frame = 3
Query: 45 MAETIGFIGLGIMGQGMASNLAKAGAKVVVWNRSEGKRSAFVAEHEGCSAVATPKEVVEACELTYLMLSDLEAS 266
M+ IGFIGLGIMG GMA NL KAG +VVWNR K AFV E G A + KEV+E CE+TY MLS LEAS
Sbjct: 1 MSGEIGFIGLGIMGLGMAKNLVKAGRSLVVWNRDVSKSEAFVLEFGGQIA-GSAKEVIERCEITYSMLSTLEAS 73
BLAST of mRNA_S-firma_F_contig10973.1287.1 vs. uniprot
Match: R1FFW2_EMIHU (Uncharacterized protein n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=R1FFW2_EMIHU) HSP 1 Score: 80.1 bits (196), Expect = 1.030e-14 Identity = 44/84 (52.38%), Postives = 57/84 (67.86%), Query Frame = 3
Query: 45 MAETIGFIGLGIMGQGMASNLAKAGAKVVVWNRSEGKRSAFVAEHEGC-SAVATPKEVVEACELTYLMLSDLEASK*DREKRAG 293
M +++GFIGLGIMG+GMA L K+G K+VVWNRS GK +A A+H G +AV +P V+ AC+L Y MLS +A K E G
Sbjct: 1 MTDSVGFIGLGIMGEGMAKCLLKSGRKLVVWNRSAGKCAALSADHPGAVTAVDSPSAVLAACDLVYCMLSTPDAVKAVYEMEGG 84
BLAST of mRNA_S-firma_F_contig10973.1287.1 vs. uniprot
Match: A0A7S4NXR3_9EUKA (Hypothetical protein n=1 Tax=Paramoeba aestuarina TaxID=180227 RepID=A0A7S4NXR3_9EUKA) HSP 1 Score: 79.7 bits (195), Expect = 1.430e-14 Identity = 41/71 (57.75%), Postives = 53/71 (74.65%), Query Frame = 3
Query: 57 IGFIGLGIMGQGMASNLAKAGAKVVVWNRSEGKRSAFVAEHEGCSAVATPKEVVEACELTYLMLSDLEASK 269
+GFIGLGIMG GMA+NL K+G K+VVWNRS K F A++ G +VATPK VVEAC++TY L+ E ++
Sbjct: 8 VGFIGLGIMGVGMANNLLKSGRKLVVWNRSTAKAEDFAAKY-GAESVATPKAVVEACDVTYSCLTTPEVAR 77
BLAST of mRNA_S-firma_F_contig10973.1287.1 vs. uniprot
Match: R1DDQ3_EMIHU (Uncharacterized protein n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=R1DDQ3_EMIHU) HSP 1 Score: 73.9 bits (180), Expect = 2.100e-12 Identity = 45/95 (47.37%), Postives = 54/95 (56.84%), Query Frame = 3
Query: 48 AETIGFIGLGIMGQGMASNLAKAGAKVVVWNRSEGKRSAFVAEHEGCSAVA-TPKEVVEACELTYLMLSDLEASK*DREKRAGTADRFENSTAGI 329
AE +GFIGLGIMGQGMA LA +G + VW R SA +EH G VA +P VVEAC TYLMLS +A + R G + + A I
Sbjct: 13 AEPVGFIGLGIMGQGMARRLASSGQPLHVWTRGATAASALASEHPGAVTVAESPAAVVEACSRTYLMLSTPDACEEVYSMRGGVLEGVSDGKALI 107
BLAST of mRNA_S-firma_F_contig10973.1287.1 vs. uniprot
Match: A0A8J2SA39_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SA39_9STRA) HSP 1 Score: 71.2 bits (173), Expect = 1.650e-11 Identity = 38/71 (53.52%), Postives = 48/71 (67.61%), Query Frame = 3
Query: 60 GFIGLGIMGQGMASNLAKAGAKVVVWNRSEGKRSAFVAEHEGC-SAVATPKEVVEACELTYLMLSDLEASK 269
GFIG+GIMG+GMA L KAG +VVWNR K A H G + V++ EV++AC +TY MLS LEAS+
Sbjct: 4 GFIGIGIMGEGMAGCLLKAGKALVVWNRDASKAQKLAAAHPGLVTVVSSAGEVIDACAVTYSMLSTLEASE 74
BLAST of mRNA_S-firma_F_contig10973.1287.1 vs. uniprot
Match: A0A4W5MGV5_9TELE (NAD_binding_2 domain-containing protein n=1 Tax=Hucho hucho TaxID=62062 RepID=A0A4W5MGV5_9TELE) HSP 1 Score: 67.4 bits (163), Expect = 2.110e-11 Identity = 38/89 (42.70%), Postives = 51/89 (57.30%), Query Frame = 3
Query: 30 NTNNTMAETIGFIGLGIMGQGMASNLAKAGAKVVVWNRSEGKRSAFVAEHEGCSAVATPKEVVEACELTYLMLSDLEASK*DREKRAGT 296
N N + IGF+GLG+MG G+ SNL K G V VWNR+ K F+ EG TP EVV C++T+ +SD +A++ K GT
Sbjct: 4 NVNLSFFYRIGFLGLGLMGSGIVSNLLKMGHVVTVWNRTVEKCDLFI--QEGARLGRTPAEVVSMCDITFSCVSDPKAARDVSTKETGT 90
BLAST of mRNA_S-firma_F_contig10973.1287.1 vs. uniprot
Match: UPI001BDA7B1C (NAD(P)-dependent oxidoreductase n=2 Tax=Geobacter TaxID=28231 RepID=UPI001BDA7B1C) HSP 1 Score: 70.9 bits (172), Expect = 2.260e-11 Identity = 38/68 (55.88%), Postives = 45/68 (66.18%), Query Frame = 3
Query: 51 ETIGFIGLGIMGQGMASNLAKAGAKVVVWNRSEGKRSAFVAEHEGCSAVATPKEVVEACELTYLMLSD 254
+T GFIGLGIMG MA NL KAG V VWNRS K E G + ATP++VVEAC +T+ ML+D
Sbjct: 2 QTFGFIGLGIMGSAMAKNLIKAGFTVTVWNRSADKCREL--EALGATVAATPRQVVEACPVTFAMLAD 67 The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10973.1287.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-firma_F_contig10973.1287.1 >prot_S-firma_F_contig10973.1287.1 ID=prot_S-firma_F_contig10973.1287.1|Name=mRNA_S-firma_F_contig10973.1287.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=76bp MAETIGFIGLGIMGQGMASNLAKAGAKVVVWNRSEGKRSAFVAEHEGCSAback to top mRNA from alignment at S-firma_F_contig10973:3662..4655+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-firma_F_contig10973.1287.1 ID=mRNA_S-firma_F_contig10973.1287.1|Name=mRNA_S-firma_F_contig10973.1287.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=994bp|location=Sequence derived from alignment at S-firma_F_contig10973:3662..4655+ (Sphaerotrichia firma ET2_F female)back to top Coding sequence (CDS) from alignment at S-firma_F_contig10973:3662..4655+ >mRNA_S-firma_F_contig10973.1287.1 ID=mRNA_S-firma_F_contig10973.1287.1|Name=mRNA_S-firma_F_contig10973.1287.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=456bp|location=Sequence derived from alignment at S-firma_F_contig10973:3662..4655+ (Sphaerotrichia firma ET2_F female)back to top |