mRNA_S-firma_F_contig10970.1284.1 (mRNA) Sphaerotrichia firma ET2_F female
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Overview
Homology
BLAST of mRNA_S-firma_F_contig10970.1284.1 vs. uniprot
Match: D8LL47_ECTSI (Leucine carboxyl methyltransferase 1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL47_ECTSI) HSP 1 Score: 178 bits (452), Expect = 2.780e-52 Identity = 105/174 (60.34%), Postives = 117/174 (67.24%), Query Frame = 2
Query: 38 MKRAPAGSEERVQGTANDAAIGKLSAASLGYFEDPFLEVLVGAT--------RSADEPLRRLPPVINRGNFARVSCIEKLVLDFIDVSPSARSQ---HATCTGESRGG-KPKCSEAHSSTSTSTTGLGHTPARKPQVISLGAGKDSLFFRLRDRGIAPAGGYVEVDFPAVSAWK 523
M+R GS+E VQ TA+DAA GKLSAASLGYFED FLEVLVGA + P+RRLPP+INRGNFARVSC+EKLVL+FI SPS S H G+ K C E+ SS + ARKPQVISLGAGKDSLFFRL DRG A +GGY EVDFPAVS WK
Sbjct: 1 MRRVQVGSDESVQATASDAAAGKLSAASLGYFEDRFLEVLVGAAGAPVPGTAEATTPPVRRLPPIINRGNFARVSCMEKLVLEFIGTSPSHPSSVPHHVRGDGDEHPSHKTDCKESQSS-------IEEHLARKPQVISLGAGKDSLFFRLMDRGTAASGGYFEVDFPAVSRWK 167
BLAST of mRNA_S-firma_F_contig10970.1284.1 vs. uniprot
Match: A0A835YKC0_9STRA (Leucine carboxyl methyltransferase 1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKC0_9STRA) HSP 1 Score: 103 bits (257), Expect = 2.450e-23 Identity = 70/155 (45.16%), Postives = 89/155 (57.42%), Query Frame = 2
Query: 59 SEERVQGTANDAAIGKLSAASLGYFEDPFLEVLVGATRSADEPLRRLPPVINRGNFARVSCIEKLVLDFIDVSPSARSQHATCTGESRGGKPKCSEAHSSTSTSTTGLGHTPARKPQVISLGAGKDSLFFRLRDRGIAPAGGYVEVDFPAVSAWK 523
++ V+GTA+DA GKLSA +LGYF+DPFL V ++ A R PP+INRGNFAR++C++K+V F A S S P A SS ST+ L TP QV+SLGAG D+ FFRL AP GGY E+DFP+ K
Sbjct: 8 NDAAVKGTADDAITGKLSAVTLGYFDDPFL---VHFSKPAPGQPSRRPPIINRGNFARMACVDKVVRAFCGCE--ALSGDKQLLPPSHLPPPL---APSSPSTTIPPLETTP----QVVSLGAGNDTTFFRLARDSAAPRGGYFEIDFPSTMERK 150
BLAST of mRNA_S-firma_F_contig10970.1284.1 vs. uniprot
Match: A0A2D4BY23_PYTIN ([Phosphatase 2A protein]-leucine-carboxy methyltransferase n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BY23_PYTIN) HSP 1 Score: 84.0 bits (206), Expect = 7.280e-18 Identity = 58/149 (38.93%), Postives = 77/149 (51.68%), Query Frame = 2
Query: 80 TANDAAIGKLSAASLGYFEDPFLEVLVGATRSADEPLRRLPPVINRGNFARVSCIEKLVLDFIDVSPSARSQHATCTGESRGGKPKCSEAHSSTSTSTTGLGHTPARKPQVISLGAGKDSLFFRLRDRGIAPAG-GYVEVDFPAVSAWK 523
TA+DA++ KLSAASLGYFEDPF++ V + P RR+P +INRG +ARV+ +E++VL F+D HT A QV+ LGAG D++FFRLR P + EVDFP V+ K
Sbjct: 3 TASDASLCKLSAASLGYFEDPFVQFFVKS------PSRRMP-IINRGYYARVTAMERVVLRFLDA-------------------------------------HTNAAGAQVVVLGAGLDTMFFRLRRANRLPTNCTFFEVDFPDVTLQK 107
BLAST of mRNA_S-firma_F_contig10970.1284.1 vs. uniprot
Match: A0A2D4CLK6_PYTIN (Leucine carboxyl methyltransferase 1 n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CLK6_PYTIN) HSP 1 Score: 84.0 bits (206), Expect = 3.890e-16 Identity = 58/149 (38.93%), Postives = 77/149 (51.68%), Query Frame = 2
Query: 80 TANDAAIGKLSAASLGYFEDPFLEVLVGATRSADEPLRRLPPVINRGNFARVSCIEKLVLDFIDVSPSARSQHATCTGESRGGKPKCSEAHSSTSTSTTGLGHTPARKPQVISLGAGKDSLFFRLRDRGIAPAG-GYVEVDFPAVSAWK 523
TA+DA++ KLSAASLGYFEDPF++ V + P RR+P +INRG +ARV+ +E++VL F+D HT A QV+ LGAG D++FFRLR P + EVDFP V+ K
Sbjct: 3 TASDASLCKLSAASLGYFEDPFVQFFVKS------PSRRMP-IINRGYYARVTAMERVVLRFLDA-------------------------------------HTNAAGAQVVVLGAGLDTMFFRLRRANRLPTNCTFFEVDFPDVTLQK 107
BLAST of mRNA_S-firma_F_contig10970.1284.1 vs. uniprot
Match: A0A6H5JEL0_9PHAE (Leucine carboxyl methyltransferase 1 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEL0_9PHAE) HSP 1 Score: 80.9 bits (198), Expect = 2.720e-15 Identity = 38/43 (88.37%), Postives = 39/43 (90.70%), Query Frame = 2
Query: 395 ARKPQVISLGAGKDSLFFRLRDRGIAPAGGYVEVDFPAVSAWK 523
ARKPQVISLGAGKDSLFFRL DRG AP+GGY EVDFPAVS WK
Sbjct: 28 ARKPQVISLGAGKDSLFFRLMDRGTAPSGGYFEVDFPAVSTWK 70
BLAST of mRNA_S-firma_F_contig10970.1284.1 vs. uniprot
Match: A0A6H5JG73_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG73_9PHAE) HSP 1 Score: 75.5 bits (184), Expect = 6.380e-15 Identity = 44/68 (64.71%), Postives = 49/68 (72.06%), Query Frame = 2
Query: 38 MKRAPAGSEERVQGTANDAAIGKLSAASLGYFEDPFLEVLVGA-------TRSADEP-LRRLPPVINR 217
M+R GS+E VQ TA+DAA GKLSAASLGYFED FLEVLVGA T A P +RRLPP+INR
Sbjct: 1 MRRVQVGSDESVQATASDAAAGKLSAASLGYFEDRFLEVLVGAAGAPVPGTAEATTPSVRRLPPIINR 68
BLAST of mRNA_S-firma_F_contig10970.1284.1 vs. uniprot
Match: A0A7S0E1B4_9CRYP (Leucine carboxyl methyltransferase 1 n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0E1B4_9CRYP) HSP 1 Score: 80.5 bits (197), Expect = 1.130e-14 Identity = 55/154 (35.71%), Postives = 79/154 (51.30%), Query Frame = 2
Query: 62 EERVQGTANDAAIGKLSAASLGYFEDPFLEVLVGATRSADEPLRRLPPVINRGNFARVSCIEKLVLDFIDVSPSARSQHATCTGESRGGKPKCSEAHSSTSTSTTGLGHTPARKPQVISLGAGKDSLFFRLRDRGIAPAGGYVEVDFPAVSAWK 523
E+ V T+ DAA+ K A S GY+EDPF+ + V + S PP+INRG++ARV+ + K++ F+ +S G SE S G G+ R+ Q++ LG+G DS FF L++ P GGY EVDF V +K
Sbjct: 35 EKAVMATSEDAALCKSIAVSKGYYEDPFIHLFVSRSGSR-------PPLINRGHYARVAAVRKVIFQFL---------------QSCGNNDISSE-------SEQGSGNQSLRE-QIVILGSGLDSTFFYLKEINKQPRGGYFEVDFEDVVRYK 158
BLAST of mRNA_S-firma_F_contig10970.1284.1 vs. uniprot
Match: A0A8K1FE28_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FE28_PYTOL) HSP 1 Score: 80.1 bits (196), Expect = 1.160e-14 Identity = 52/155 (33.55%), Postives = 82/155 (52.90%), Query Frame = 2
Query: 62 EERVQGTANDAAIGKLSAASLGYFEDPFLEVLVGATRSADEPLRRLPPVINRGNFARVSCIEKLVLDFIDVSPSARSQHATCTGESRGGKPKCSEAHSSTSTSTTGLGHTPARKPQVISLGAGKDSLFFRLRDRGIAPAG-GYVEVDFPAVSAWK 523
+ V TA+DA++ KLSA++LGYF+D +++ V + P RR+P +INRG +ARV+ +E++V F+DV H A K QV+ LGAG D+++FRL+++ + P+ Y E+DFP V+ K
Sbjct: 12 DSAVMETASDASLCKLSASALGYFQDAYVQYFVKS------PSRRMP-IINRGYYARVAAMERVVTKFLDV-------------------------------------HAAAPKVQVVILGAGLDTMYFRLKEKALLPSQCEYFELDFPDVTLQK 122
BLAST of mRNA_S-firma_F_contig10970.1284.1 vs. uniprot
Match: A0A3E2HAW6_SCYLI (Leucine carboxyl methyltransferase 1 (Fragment) n=1 Tax=Scytalidium lignicola TaxID=5539 RepID=A0A3E2HAW6_SCYLI) HSP 1 Score: 79.3 bits (194), Expect = 3.340e-14 Identity = 60/160 (37.50%), Postives = 81/160 (50.62%), Query Frame = 2
Query: 44 RAPAGSEERVQGTANDAAIGKLSAASLGYFEDPFLEVLVGATRSADEPLRRLPPVINRGNFARVSCIEKLVLDFIDVSPSARSQHATCTGESRGGKPKCSEAHSSTSTSTTGLGHTPARKPQVISLGAGKDSLFFRLRDRGIAPAGGYVEVDFPAVSAWK 523
R+ A S+E +QGT DAA+ +LSA +LGY ED + E V +RRLP +INRG + R S ++ L+ F+ S S T T S P S A T Q+ISLGAG D+ +FR+RD+ + Y E DFP V+ K
Sbjct: 44 RSGAQSDETIQGTDTDAAVSRLSAVTLGYLEDRYAEHFVSGPA-----IRRLP-IINRGTYTRTSTLDLLINAFLSSSGSK-----TPTSSS----PSASAAQLQTK--------------QIISLGAGTDTRYFRIRDQNLHKNVIYHEFDFPRVTEVK 174
BLAST of mRNA_S-firma_F_contig10970.1284.1 vs. uniprot
Match: A0A5D6XUU8_9STRA (Leucine carboxyl methyltransferase 1 n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XUU8_9STRA) HSP 1 Score: 78.6 bits (192), Expect = 4.400e-14 Identity = 54/154 (35.06%), Postives = 77/154 (50.00%), Query Frame = 2
Query: 62 EERVQGTANDAAIGKLSAASLGYFEDPFLEVLVGATRSADEPLRRLPPVINRGNFARVSCIEKLVLDFIDVSPSARSQHATCTGESRGGKPKCSEAHSSTSTSTTGLGHTPARKPQVISLGAGKDSLFFRLRDRGIAPAGGYVEVDFPAVSAWK 523
+ V TA DA++ KLSA+SLGY+ DPF++ V P RR+P +INRG +ARV+ +E LV F+ S + +Q +K QV+ LGAG D++FFRL++ G Y E+DFP V+ K
Sbjct: 7 DSAVMETAADASLCKLSASSLGYYHDPFVQFFVKF------PSRRMP-IINRGYYARVAAVEALVSKFLASSAAPDTQQ---------------------------------QKKQVVVLGAGHDTMFFRLQEAGKLAQCEYFELDFPDVTMQK 120 The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10970.1284.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-firma_F_contig10970.1284.1 >prot_S-firma_F_contig10970.1284.1 ID=prot_S-firma_F_contig10970.1284.1|Name=mRNA_S-firma_F_contig10970.1284.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=175bp VRACAVRVFVSSDEEGAGWKRREGAGHCERCGDREAERGLAGLLRGPFLGback to top mRNA from alignment at S-firma_F_contig10970:1935..4036+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-firma_F_contig10970.1284.1 ID=mRNA_S-firma_F_contig10970.1284.1|Name=mRNA_S-firma_F_contig10970.1284.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=2102bp|location=Sequence derived from alignment at S-firma_F_contig10970:1935..4036+ (Sphaerotrichia firma ET2_F female)back to top Coding sequence (CDS) from alignment at S-firma_F_contig10970:1935..4036+ >mRNA_S-firma_F_contig10970.1284.1 ID=mRNA_S-firma_F_contig10970.1284.1|Name=mRNA_S-firma_F_contig10970.1284.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=1050bp|location=Sequence derived from alignment at S-firma_F_contig10970:1935..4036+ (Sphaerotrichia firma ET2_F female)back to top |