mRNA_S-firma_F_contig1097.1281.1 (mRNA) Sphaerotrichia firma ET2_F female
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Overview
Homology
BLAST of mRNA_S-firma_F_contig1097.1281.1 vs. uniprot
Match: D8LED7_ECTSI (EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LED7_ECTSI) HSP 1 Score: 283 bits (724), Expect = 4.160e-79 Identity = 190/518 (36.68%), Postives = 247/518 (47.68%), Query Frame = 2
Query: 80 LGCWTDVKRDRVFDNLQTGASTVNTPAQCATSCGSDFA-YFGVQNGDECFCGLATE-DYTKHGESTLCTTPCAGDRSVDCGGHLAIEVFRIGDMPMPSPTPGGLPGPLGCWADVKKDRVF-DNLPTRSSTANTVANCATSCGSDFAYF-GVQNGDECFCGLAT--EDYTRHGKSTLCTTPCTGDRSVDCGGHLAIEVFRI-GEEVPMAPPAEVPTPSPPTTQAPVTRTPGGFPGYLGCWTDSKKSRVFTSAFTETRDNTPETCQTTCSDYAFFGLQNGDECFCGTKGDDYERHGESDECTVDCSGDYAESKCGGPWAMDVYSTGDYTPPTPAPATTFGGVDGCKVVLIEAEDLDLVGDWNIKSDPVASGGEYIVWEGLGNNESNNRKA-ADIIAAVVKITVPGTYRFKWKMRQPDGVESDKANDTWLYFPNAARFGPLNSDASYGEFVKVYGRALNGVFEYSGTAEDGNTHEHSQIAVDFKEAGEYTMEIAGRSHGHEIDQIVLYDDSLNVNTAARGC 1609
+GC+ D K DRVF+ ++T S+ T A C C A Y Q G EC+C + E +Y +H + +C C GD + CGG A ++++I + P+ +GC+AD ++DR+ D + + V C T C AYF Q GDEC+CG++ EDY RHG+ + C C+GD +V CGG A +F+ G P+AP TP PTP + C VV+IEAEDL + GDW I D ASGG YI WEGL ++N+ A DII+ V+I GTY FKW MRQPDGVESDKAND+WL FP+A RFGP + SYG FVKVYG A +GVF+Y GTAE+ N +H+QIA++F AGEY MEI GRSHGH+IDQIVL+ DSL V+ A GC
Sbjct: 436 VGCFADSKEDRVFEYMKT--SSTMTTAVCLEYCLDRRATYMATQYGYECWCSVDAEVEYDRHSDG-VCDHACGGDAADICGGFDAFDLYKITEPTEPTGDEY-----VGCFADDREDRLLGDEIKLQPDMTQAV--CRTYCEERDAYFYATQYGDECWCGMSNDEEDYKRHGRGS-CLAGCSGDPTVACGGFDAFNLFKFDGIAEPIAP------------------TPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----------XXXXXXXXXXVVAPTPT--------NDCMVVIIEAEDLPVNGDWRIVQDNAASGGAYITWEGLSEAQNNSDPADGDIISTSVQIPTAGTYSFKWAMRQPDGVESDKANDSWLNFPDADRFGPAGTSKSYGTFVKVYGNAADGVFKYQGTAEEENG-DHTQIAIEFAAAGEYEMEIGGRSHGHQIDQIVLFGDSLKVDDAVAGC 905
BLAST of mRNA_S-firma_F_contig1097.1281.1 vs. uniprot
Match: A0A6H5JMV6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMV6_9PHAE) HSP 1 Score: 271 bits (692), Expect = 1.950e-78 Identity = 186/518 (35.91%), Postives = 246/518 (47.49%), Query Frame = 2
Query: 80 LGCWTDVKRDRVFDNLQTGASTVNTPAQCATSCGSDFAYF-GVQNGDECFCGLATE-DYTKHGESTLCTTPCAGDRSVDCGGHLAIEVFRIGDMPMPSPTPGGLPGPLGCWADVKKDRVF-DNLPTRSSTANTVANCATSCGSDFAYF-GVQNGDECFCGLATE--DYTRHGKSTLCTTPCTGDRSVDCGGHLAIEVFRIGEEVPMAPPAEVPTPSPPTTQAPVTRTPGGFPGYLGCWTDSKKSRVFTSAFTETRDNTPETCQTTCSDYAFFGLQNGDECFCGTKGDDYERHGESDECTVDCSGDYAESKCGGPWAMDVYSTGDYTPPTPAPATTFGGVDGCKVVLIEAEDLDLVGDWNIKSDPVASGGEYIVWEGLGNNESNNRKA-ADIIAAVVKITVPGTYRFKWKMRQPDGVESDKANDTWLYFPNAARFGPLNSDASYGEFVKVYGRALNGVFEYSGTAEDGNTHEHSQIAVDFKEAGEYTMEIAGRSHGHEIDQIVLYDDSLNV-NTAARGC 1609
+GC+ D K DRVF+ ++T S T A C C A F Q G EC+C + E +Y +H + +C C G+ + CGG A ++++I + P+ +GC+AD ++DR+ D + + TV C T C AYF Q GDEC+CG++ + DY RHG+ + C C+GD +V CG + +++ P VT PGGF + D V + + T A T D C VV+IEAEDL + GDW I D ASGG YI WEGL ++N DII+ V+I GTY FKW MRQPDGVESDKAND+WL FP+A RFGP ++ SYG FVKVYG A +GVF+Y GTAED + H+QIA++F AGEY MEI GRSHGH+IDQIVL+ S + A GC
Sbjct: 14 VGCFADSKDDRVFEYMKT--SPTMTTAVCLEYCLDRRATFMATQFGIECWCSVDAEIEYDRHSDG-VCDCECGGEATDICGGFDAFDLYKITEPTEPTGDEY-----VGCFADDREDRLLGDEIKLQPDMTQTV--CRTYCEERDAYFYATQYGDECWCGMSEDEQDYKRHGRGS-CLAGCSGDPTVACGRDFQVVIYKHESFQPFLA---------------VTLVPGGFDAFNLFKFDGVAEPVAPTPGPXXXXXXXVSALTPEPVAAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTND-----------------CMVVIIEAEDLPVNGDWRIVQDNAASGGAYITWEGLSEAQNNRDPGDGDIISTSVQIPTAGTYSFKWAMRQPDGVESDKANDSWLNFPDADRFGPADTSKSYGTFVKVYGNAADGVFKYQGTAEDEDGA-HTQIAIEFAAAGEYEMEIGGRSHGHQIDQIVLFGGSFHTAEDAVAGC 487
BLAST of mRNA_S-firma_F_contig1097.1281.1 vs. uniprot
Match: D7FLI8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLI8_ECTSI) HSP 1 Score: 232 bits (592), Expect = 2.680e-60 Identity = 133/329 (40.43%), Postives = 179/329 (54.41%), Query Frame = 2
Query: 80 LGCWTDVKRDRVFDNLQTGASTVNTPAQCATSCGSD-FAYFGVQNGDECFCGLATEDYTKHGESTL--CTTPCAGDRSVDCGGHLAIEVFRIGDMPMPSPTPGGLPGPLGCWADVKKDRVFDNLPTRSSTANTVANCATSCGSDFAYFGVQNGDECFCGLATEDYTRHGKSTLCTTPCTGDRSVDCGGHLAIEVFRIGEEVPMAPPAEVPTPSPPTTQAPVTRTPGGFPGYLGCWTDSKKSRVFTSAFTETRDN-TPETCQTTCSDYAFFGLQNGDECFCGTKGDDYERHGESDECTVDCSGDYAESKCGGPWAMDVYSTGDYTPPTPA 1054
LGC D + DRV + + T TP CA C S+ + ++G+Q G EC+CG+A DY + G + C PC GD S CGG+LA + F +G P+ P G LGC+AD + R+F L + T N +C SC +AY+G+Q G++CFCG A EDYT +G+S C CTGD S CGG A++V+ + T GYLGC+ D++ SR+F++ DN + ETC+ TC YA++GLQ +CFCGT +DY HGES+ C C+GD A S CGG WAMDVY GD PA
Sbjct: 52 LGCCRDGRSDRVLEQ-ELMDQTDLTPDTCALHCYSEGYQFYGLQYGQECWCGVAGTDYDRLGSLDMSECAYPCTGDASSTCGGYLAFQAFELGSQNQPTTAPPT--GYLGCYAD-DRSRIFSALHV-TLTDNNAESCKASC-VGYAYYGLQYGEQCFCGTADEDYTVYGESDNCVLSCTGDASSTCGGSWAMDVYAMXXXXXXXXXXXXXXXXXXXTAV--------SSGYLGCYADTRTSRIFSAPIIADADNNSAETCKATCVGYAYYGLQYALQCFCGTADEDYTLHGESNNCLYPCTGD-ASSTCGGAWAMDVYVMGDDVTAPPA 365
BLAST of mRNA_S-firma_F_contig1097.1281.1 vs. uniprot
Match: D7FU28_ECTSI (EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FU28_ECTSI) HSP 1 Score: 223 bits (568), Expect = 1.860e-58 Identity = 158/439 (35.99%), Postives = 209/439 (47.61%), Query Frame = 2
Query: 395 LGCWADVKKDRVF-DNLPTRSSTANTVANCATSCGSDFAYFGVQNGDECFCGLATE--DYTRHGK----STLCTTPCTGDRSVDCGGHLAIEVFRIGEEVPMAPPAEVPTPSPPTTQAPVTRTPGGFP--GYLGCWTDSKKSRVFTSAFTETRDNTPETCQTTCSDYAFFGLQNGDECFCGTKGDDYERHGESDECTVDCSGDYAESKCGGPWAMDVYSTGDYTPPTPAPATTFGG----------------------VDGCKVVLIEAEDLDLVGDWNIKSDPVASGGEYIVWEGLGNNESNNRKA-ADIIAAVVKITVPGTYRFKWKMRQPDGVESDKANDTWLYFPNAARFGPLNSDASYGEFVKVYGRALNGVFEYSGTAEDGNTHEHSQIAVDFKEAGEYTMEIAGRSHGHEIDQIVLYDDSLNVNTAAR--GC 1609
+GC+ D K+DR+ D L + T T G+ A+ Q G EC+C A E DY RH + +C C GD++ CGG + +++++ Q T G P Y C +D T TC C D G +C D C C P ST T P A +T+ GC VV +EAEDL ++GDW + +D ASGG+YI WEGL ++N A DI++A +++ GTY FKW MRQPDGVESDK ND WL FP+A R+GP + SYG F+KVYGRA NG FEYSGT ED +H H+QIAV+F+EAGEY MEI+GRSHG +IDQI+++ + L+V+ A GC
Sbjct: 399 VGCFHDNKEDRILGDKLDSVDMTTEVCLAHCTELGA--AFMATQFGFECWCS-ADELLDYERHYQMNDADAVCDMSCRGDKTQPCGGFNSFDLYKL--------------------QTTSTVLCSGTPVEAYEQCGG---------------KDWTGSTC---CMD--------GYDC----------TQMVEDGCYAQCRPSVTVE----PITPSPVST---TRPPVALSTSXXXXXXXXXXXXXXXXXXXXXVSEPTSGCMVVRMEAEDLPVLGDWRVVNDADASGGKYITWEGLSEGQNNGDPADGDIMSASIQVPTAGTYSFKWLMRQPDGVESDKGNDAWLNFPDAKRYGPAGTQESYGTFIKVYGRATNGDFEYSGTGED--SHGHTQIAVEFEEAGEYAMEISGRSHGLQIDQILVFGEDLSVDEAVANTGC 769
BLAST of mRNA_S-firma_F_contig1097.1281.1 vs. uniprot
Match: D8LNS1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNS1_ECTSI) HSP 1 Score: 192 bits (487), Expect = 6.660e-51 Identity = 122/332 (36.75%), Postives = 164/332 (49.40%), Query Frame = 2
Query: 80 LGCWTDVKRDRVFDNLQTGASTVNTPAQCATSCGSDFAYFGVQNGDECFCGLATEDYTKHGESTLCTTPCAGDRSVDCGGHLAIEVFRIGDMPMPSPTPGGLPGPLGCWADVKKDRVFDNLPTRSSTANTVANCATSCGSDFAYFGVQNGDECFCGLATEDYTRHGKSTLCTTPCTGDRSVDCGGHLAIEVFRIGEEVPMAPPAEVPTPSPPTTQAPVTRTPGGFPGYLGCWTDSKKSRVFTSAFTETRDNTPETCQTTCSDYAFFGLQNGDECFCGTKGDDYERHGESDECTVDCSGDYAESKCGGPWAMDVYSTGDYTPPTPAPATTFGG 1075
LGC+ D DR+ D+ T T C +C +YF Q G EC+CG A DY KHGEST CT C G+ CGG A + + P+PT +GC+ D +DR+ + T SS+ T C +C + YF Q G EC+CG A DY +HG+ST CT C G+ CGG A V+ P PT S Y+GC+ D + R+ A TE+ T E C+ TC+ ++F Q G EC+CG G DYE+HGES ECT +C G+ E+ CGG +A VY+ Y+ P P ++ G
Sbjct: 31 LGCFNDDGDDRIMDDRAL-VDTSMTTELCELTCAGS-SYFSTQYGRECWCGPAGTDYEKHGESTECTYECPGNPDETCGGFYAASAYAYSTVE-PTPTFSY----VGCFQD-DQDRIMELALTESSSMTTEL-CELTCAGSY-YFSTQYGRECWCGPAGTDYEKHGESTECTYECPGNPDETCGGFYAASVYAYSTVEP------TPTFS-----------------YVGCFQDDQ-DRIMELALTESSSMTTELCELTCAGSSYFSTQYGRECWCGPAGTDYEKHGESTECTYECPGNPDET-CGGFYAASVYA---YSTVEPTPTFSYVG 324
BLAST of mRNA_S-firma_F_contig1097.1281.1 vs. uniprot
Match: UPI00148AD966 (uncharacterized protein LOC105345065 n=1 Tax=Crassostrea gigas TaxID=29159 RepID=UPI00148AD966) HSP 1 Score: 152 bits (385), Expect = 2.600e-34 Identity = 114/367 (31.06%), Postives = 166/367 (45.23%), Query Frame = 2
Query: 8 CGGSNAFEIFEYIT-VEEPLKEAEPLGCWTDVKRDRVFDNLQTGASTVNTPAQCATSCGSD-FAYFGVQNGDECFCG--LATEDYTKHGESTLCTTPCAGDRSVDCGGHLAIEVFRIGDMPMPSPTPGGLPGPLGCWADVKKDRVFDNLPTRSSTANTVANCATSCGS-DFAYFGVQNGDECFCGLATEDYTRHGKSTLCTTPCTGDRSVDCGGHLAIEVFRIGEEVPMAPPAEVPTPSPPTTQAPVTRTPGGFPGYLGCWTDSKKSRVFTSAFTETRDNTPETCQTTC--SDYAFFGLQNGDECFCGTKGDDYERHGESDECTVDCSGDYAESKCGGPWAMDVYSTGDYTPPTPAPATTFGGVDGC 1087
CGGS ++E + + + + + GC+ D + + + AS T C C F Y+GV+ G +CFCG L D K E C PC GDR CGG I +++ P PT +GC+ D ++ R + T+SS+ TV C +C S + Y+GV++ +ECFCG ++ K + C PC GDR CGG I V++ + P A + + Y+GC+ D +R + T +R T ETC+ TC +D ++GL+ GDECFCG K + EC C+GD E CGG W + VY + P T G GC
Sbjct: 352 CGGSWKLAVYENPSFIHTAIVKKDYKGCYKDQYARTLNEKRKNYASM--TVDYCRKICSDGKFKYYGVEAGHQCFCGNKLTKSDKKKDSE---CMNPCRGDREQACGGGWRIAIYQ---NPNFKPTAIVKKEFVGCYKD-QRSRTLNEKDTKSSSM-TVDKCRKTCTSLKYKYYGVEDQNECFCGDKLTK-SKKMKESDCMRPCKGDREQACGGSWRIAVYKNPDFKPTA----------------IVQK-----DYVGCYVDKLLARTLGTKKTSSRSMTVETCRKTCLKADTKYYGLEAGDECFCGNK---LGKKKSDSECKTPCTGD-KEQVCGGSWRLAVYKNTKFVPLT----IVKSGYKGC 678
BLAST of mRNA_S-firma_F_contig1097.1281.1 vs. uniprot
Match: UPI001E8ED079 (WSC domain-containing protein n=1 Tax=Emericellopsis atlantica TaxID=2614577 RepID=UPI001E8ED079) HSP 1 Score: 144 bits (364), Expect = 1.680e-33 Identity = 114/347 (32.85%), Postives = 158/347 (45.53%), Query Frame = 2
Query: 8 CGGSNAFEIFEYITVEEPLKEAEP----LGCWTDVKRDRVFDNLQTGASTVNTPAQCATSC-GSDFAYFGVQNGDECFCGLATEDYTKHGESTLCTTPCAGDRSVDCGGHLAIEVFRIGDMPMPSPTPGGLPGPLGCWADVKKDRVFDNLPTRSSTAN--TVANCATSCGSDFAYFGVQNGDECFCGLATE-DYTRHGKSTLCTTPCTGDRSVDCGGHLAIEVFRIGEEVPMAPPAEVPTPSPPTTQAP-VTRTPGGFPGYLGCWTDSKKSRVFTSAFTETRDNTPETCQTTCSDYAFFGLQNGDECFCGTKGDDYERHGESDECTVDCSGDYAESKCGGPWAMDVY 1021
CG + EI+ +P P GC + DR +++ + TP C + C G F Y G+Q EC+C +T + + C CAGD+ CGGH V+ G + S G +GC AD RV L R +TA+ T A CA+ C SD+AYFG++NG+EC+CG + D G+ C PC GD CG + V++ TT P V T G F YL C D+ R + D TPE C C+D+A+FGL+ G EC+CG + + E+ + +C CSGD A CGGP + VY
Sbjct: 114 CGAGDRLEIYLNEQYTDPTVATVPGFAYKGCRAEPYEDRALPDMRYEQDDM-TPETCTSLCSGGGFLYAGLQWSRECWCS-STIKGGHWVDDSECDMLCAGDKDSFCGGHKLNTVY--GPENVVSAVVDGWSN-VGCAADSVSARV---LSARQTTASDMTAATCASFC-SDYAYFGLENGNECYCGQSFGGDLVDDGE---CALPCRGDGLTVCGDADRLSVYQ-------------------TTDMPSVAATVGDF-SYLHCGADNVGDRALQGGYIHGDDITPEKCAEACADFAYFGLEFGRECYCGNEYEGAEQ--DEGDCFKRCSGD-ASLLCGGPDRLSVY 425
BLAST of mRNA_S-firma_F_contig1097.1281.1 vs. uniprot
Match: A0A6H5JQ44_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQ44_9PHAE) HSP 1 Score: 149 bits (375), Expect = 1.690e-33 Identity = 82/206 (39.81%), Postives = 112/206 (54.37%), Query Frame = 2
Query: 80 LGCWTDVKRDRVFDNLQTGASTVNTPAQCATSC--GSDFAYFGVQNGDECFCGLATEDYTKHG--ESTLCTTPCAGDRSVDCGGHLAIEVFRIGDMPMPSPTPGGLPGPLGCWADVKKDRVFDNLPTRSSTANTVANCATSCGSDFAYFGVQNGDECFCGLATEDYTRHGKSTLCTTPCTGDRSVDCGGHLAIEVFRIGEEVPMAP 685
LGC+ D + DRV + G S + TP CA C + ++GVQ G EC+CG A +Y + G E + C PC GD S CGG + + F +G + P G LGC+ D + R+F + P +S +NT C +C + FAY+G+Q +ECFCGLA EDYTR G S C C+GD CGG A++VF + V P
Sbjct: 53 LGCYRDSQSDRVLQSGLMGQSDM-TPDVCAAYCLDKGSYTFYGVQYGQECWCGRAGTEYDRLGALEMSECDYPCTGDASSTCGGFDSFQAFELGALDQPE-------GYLGCFVDSQSSRLF-SAPLVASASNTAETCKATC-AGFAYYGLQYSEECFCGLAEEDYTRLGTSDACGYRCSGDVLSTCGGFNAMDVFAMDAGVTSPP 248
BLAST of mRNA_S-firma_F_contig1097.1281.1 vs. uniprot
Match: K1Q0M9_CRAGI (Plasminogen n=1 Tax=Crassostrea gigas TaxID=29159 RepID=K1Q0M9_CRAGI) HSP 1 Score: 147 bits (370), Expect = 1.000e-32 Identity = 100/305 (32.79%), Postives = 141/305 (46.23%), Query Frame = 2
Query: 188 FAYFGVQNGDECFCG--LATEDYTKHGESTLCTTPCAGDRSVDCGGHLAIEVFRIGDMPMPSPTPGGLPGPLGCWADVKKDRVFDNLPTRSSTANTVANCATSCGS-DFAYFGVQNGDECFCGLATEDYTRHGKSTLCTTPCTGDRSVDCGGHLAIEVFRIGEEVPMAPPAEVPTPSPPTTQAPVTRTPGGFPGYLGCWTDSKKSRVFTSAFTETRDNTPETCQTTC--SDYAFFGLQNGDECFCGTKGDDYERHGESDECTVDCSGDYAESKCGGPWAMDVYSTGDYTPPTPAPATTFGGVDGC 1087
F Y+GV+ G +CFCG L D K E C PC GDR CGG I +++ P P +GC+ D ++ R + T+SS+ TV C +C S + Y+GV++ +ECFCG ++ K + C PC GDR CGG I V++ + P A + + Y+GC+ D +R + T +R T ETC+ TC +D ++GL+ GDECFCG K + EC C+GD E CGG W + VY + P T G GC
Sbjct: 15 FKYYGVEAGHQCFCGNKLTKSDKKKDSE---CMNPCRGDREQACGGGWRIAIYQ---------NPNFKPKFVGCYKD-QRSRTLNEKDTKSSSM-TVDKCRKTCTSLKYKYYGVEDQNECFCGDKLTK-SKKMKESDCMRPCKGDREQACGGSWRIAVYKNPDFKPTA----------------IVQK-----DYVGCYVDKLLARTLGTKKTSSRSMTVETCRKTCLKADTKYYGLEAGDECFCGNK---LGKKKSDSECKTPCTGD-KEQVCGGSWRLAVYKNTKFVPLT----IVKSGYKGC 275
BLAST of mRNA_S-firma_F_contig1097.1281.1 vs. uniprot
Match: UPI001874BD84 (uncharacterized protein n=1 Tax=Colletotrichum truncatum TaxID=5467 RepID=UPI001874BD84) HSP 1 Score: 142 bits (357), Expect = 5.280e-31 Identity = 106/327 (32.42%), Postives = 161/327 (49.24%), Query Frame = 2
Query: 80 LGCWTD-VKRDRVFDNLQTGASTVNTPAQCATSCGSDFAYFGVQNGDECFCGLATEDYTKHGESTLCTTPCAGDRS--VDCGGHLAIEVFRIGDMPMPSPTPGGLPG--PLGCWADVKKDRVFDNLPTRSSTAN--TVANCATSCGSDFAYFGVQNGDECFCGLATEDYTRHGKSTLCTTPCTGDRSVDCGGHLAIEVFRIGEEVPMAPPAEVPTPSPPTTQAPVTRTPGGFPGYLGCWTDSKKSRVFTSAFTETRDNTPETCQTTC--SDYAFFGLQNGDECFCGTKGDDYERHGESDECTVDCSGDYAESKCGGPWAMDVYSTGD 1033
LGC+TD V RV + T A+ + T +CA SC S + YFGV+ G EC+CG + + + + C PCAGD + CG I ++ + +P P L G LGC+A+ + RV LP ++ A+ T A CAT+C + + YFG Q EC+CG T ++ C C G+ S CGG L + V+ + + +P PV + GF Y GC+TD+ RV + + T E C C S Y++FG++ EC+CG D + EC++ CSG+ ++S CGG + +++ D
Sbjct: 38 LGCFTDNVNGRRVLGDKNTAANDI-TLEKCAASC-SQYKYFGVEFGRECYCGNSRDSGSTEANAADCWFPCAGDPTGVAKCGAADRINIYV--NTNSNAPAPASLDGITSLGCFAEGTQ-RV---LPEKTVAASDMTAAKCATNC-AGYKYFGTQWSSECYCGNTAPAITV--PTSECNMVCAGNSSELCGGSLRLNVYELPQSSQASP-----------LSVPVIPSVSGF-DYKGCYTDNVPYRVLSGKVIKDPAMTLEMCAAACKNSGYSWFGVEFSTECYCGMALDKASTSTAAAECSMACSGNSSQS-CGGANRLSLFARPD 340 The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig1097.1281.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-firma_F_contig1097.1281.1 >prot_S-firma_F_contig1097.1281.1 ID=prot_S-firma_F_contig1097.1281.1|Name=mRNA_S-firma_F_contig1097.1281.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=422bp MPMPSPTPGGLPGPLGCWADVKKDRVFDNLPTRSSTANTVANCATSCGSDback to top mRNA from alignment at S-firma_F_contig1097:18665..25594- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-firma_F_contig1097.1281.1 ID=mRNA_S-firma_F_contig1097.1281.1|Name=mRNA_S-firma_F_contig1097.1281.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=6930bp|location=Sequence derived from alignment at S-firma_F_contig1097:18665..25594- (Sphaerotrichia firma ET2_F female)back to top Coding sequence (CDS) from alignment at S-firma_F_contig1097:18665..25594- >mRNA_S-firma_F_contig1097.1281.1 ID=mRNA_S-firma_F_contig1097.1281.1|Name=mRNA_S-firma_F_contig1097.1281.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=2532bp|location=Sequence derived from alignment at S-firma_F_contig1097:18665..25594- (Sphaerotrichia firma ET2_F female)back to top |