mRNA_S-firma_F_contig1097.1280.1 (mRNA) Sphaerotrichia firma ET2_F female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-firma_F_contig1097.1280.1
Unique NamemRNA_S-firma_F_contig1097.1280.1
TypemRNA
OrganismSphaerotrichia firma ET2_F female (Sphaerotrichia firma ET2_F female)
Homology
BLAST of mRNA_S-firma_F_contig1097.1280.1 vs. uniprot
Match: D7FPA6_ECTSI (Glutamine synthetase n=3 Tax=Ectocarpus TaxID=2879 RepID=D7FPA6_ECTSI)

HSP 1 Score: 711 bits (1834), Expect = 2.370e-258
Identity = 331/361 (91.69%), Postives = 346/361 (95.84%), Query Frame = 1
Query:    1 MPNTSFSSHTALSDEVLNEFRKLTQGGKIMAEYIWIGGTGQDLRCKTRTFPAKEGGYAVADLPKWNFDGSSTGQAPGEDSEVIIYPQAIYPDPFRGGDNIMVLCDCYKPNGEPIDSNTRKACAAIMEGAKDLVPWFGIEQEYTLFEADGVTPFGWPKSGYPGPQGPYYCSIGYENAFGRHIMEAHYKACLFAGVTISGTNGEVMPGQWEYQVGPCVGIAGGDELVVSRYLLQRVCEQFGVICSLDPKPIPGDWNGAGCHTNYSTKPMREEGGYTAIVEAIEKLGEKHDEHIAAYGEGNERRLTGRHETASMDKFSWGVANRGASIRVGRDVEKEQKGYFEDRRPSSNMDPYIVTGMIVKVR 1083
            MPNTSFS+HTALSDEVLNEFRKL QGGKIMAEYIWIGG+GQDLRCKTRTFPAKEGGYAVADLPKWN+DGSSTGQAPGEDSEVIIYPQA+YPDPFRGGDNIMVLCD Y+P+G P+ +NTRK CAAIME AK+LVPWFGIEQEYTLFEADGVTPFGWPKSGYPGPQGPYYCSIGYENAFGRHIMEAHYKACLFAGV ISGTNGEVMPGQWEYQVGPC GIA GDEL +SRYLLQRVCEQFGVI SLDPKPIPGDWNGAGCHTNYSTKPMREEGGY  I+ AIEKLGEKHDEHIAAYGEGNERRLTG+HETASMDKFS+GVANRGASIR+GRDVEKEQKGYFEDRRPSSNMDPY+VTGMIVK R
Sbjct:    1 MPNTSFSNHTALSDEVLNEFRKLPQGGKIMAEYIWIGGSGQDLRCKTRTFPAKEGGYAVADLPKWNYDGSSTGQAPGEDSEVIIYPQAVYPDPFRGGDNIMVLCDTYEPDGTPLPTNTRKECAAIMEKAKELVPWFGIEQEYTLFEADGVTPFGWPKSGYPGPQGPYYCSIGYENAFGRHIMEAHYKACLFAGVNISGTNGEVMPGQWEYQVGPCEGIASGDELWISRYLLQRVCEQFGVIVSLDPKPIPGDWNGAGCHTNYSTKPMREEGGYKDIIAAIEKLGEKHDEHIAAYGEGNERRLTGKHETASMDKFSYGVANRGASIRIGRDVEKEQKGYFEDRRPSSNMDPYVVTGMIVKRR 361          
BLAST of mRNA_S-firma_F_contig1097.1280.1 vs. uniprot
Match: A0A835YJ88_9STRA (Glutamine synthetase n=3 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJ88_9STRA)

HSP 1 Score: 630 bits (1626), Expect = 1.220e-226
Identity = 289/359 (80.50%), Postives = 316/359 (88.02%), Query Frame = 1
Query:    1 MPNTSFSSHTALSDEVLNEFRKLTQGGKIMAEYIWIGGTGQDLRCKTRTFPAKEGGYAVADLPKWNFDGSSTGQAPGEDSEVIIYPQAIYPDPFRGGDNIMVLCDCYKPNGEPIDSNTRKACAAIMEGAKDLVPWFGIEQEYTLFEADGVTPFGWPKSGYPGPQGPYYCSIGYENAFGRHIMEAHYKACLFAGVTISGTNGEVMPGQWEYQVGPCVGIAGGDELVVSRYLLQRVCEQFGVICSLDPKPIPGDWNGAGCHTNYSTKPMREEGGYTAIVEAIEKLGEKHDEHIAAYGEGNERRLTGRHETASMDKFSWGVANRGASIRVGRDVEKEQKGYFEDRRPSSNMDPYIVTGMIVK 1077
            MPN  FS HT LSD +L  F+ L Q G IM EYIWIGG+GQDLRCKTRT P KEGGY  +DLPKWNFDGSSTGQAPG+DSEVIIYPQA+Y DPFRGGDNIM LCDCYKP+G PID+NTR ACA   + A+  +PWFGIEQEYTLFEADGVTPFGWPK GYPGPQGPYYC+IG ENAFGRHIMEAHYKACLFAGV ISGTNGEVMPGQWEYQVGPCVGI  GD+L VSRYLLQRVCE FGVI SLDPKPIPGDWNGAGCHTNYST+PMR  GGY  I+EAIEKLG+KH++HI AYGEGNERRLTGRHETAS+ +FS+GVANRGASIR+GR VE+E  GYFEDRRP+SNMDPY+VTGMI++
Sbjct:    1 MPNNLFSQHTELSDAILESFKTLDQKGFIMVEYIWIGGSGQDLRCKTRTMPYKEGGYKPSDLPKWNFDGSSTGQAPGDDSEVIIYPQAVYADPFRGGDNIMALCDCYKPDGTPIDNNTRLACAKACQEAEKEIPWFGIEQEYTLFEADGVTPFGWPKGGYPGPQGPYYCAIGKENAFGRHIMEAHYKACLFAGVKISGTNGEVMPGQWEYQVGPCVGITAGDDLWVSRYLLQRVCELFGVIVSLDPKPIPGDWNGAGCHTNYSTEPMRNPGGYAKIIEAIEKLGKKHEQHIKAYGEGNERRLTGRHETASISQFSYGVANRGASIRIGRQVEEEGCGYFEDRRPASNMDPYVVTGMIIQ 359          
BLAST of mRNA_S-firma_F_contig1097.1280.1 vs. uniprot
Match: A0A7S3XXT5_HETAK (Glutamine synthetase n=3 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XXT5_HETAK)

HSP 1 Score: 547 bits (1409), Expect = 2.230e-193
Identity = 258/359 (71.87%), Postives = 291/359 (81.06%), Query Frame = 1
Query:    1 MPNTSFSSHTALSDEVLNEFRKLTQGGKIMAEYIWIGGTGQDLRCKTRTFPAKEGGYAVADLPKWNFDGSSTGQAPGEDSEVIIYPQAIYPDPFRGGDNIMVLCDCYKPNGEPIDSNTRKACAAIMEGAKDLVPWFGIEQEYTLFEADGVTPFGWPKSGYPGPQGPYYCSIGYENAFGRHIMEAHYKACLFAGVTISGTNGEVMPGQWEYQVGPCVGIAGGDELVVSRYLLQRVCEQFGVICSLDPKPIPGDWNGAGCHTNYSTKPMREEGGYTAIVEAIEKLGEKHDEHIAAYGEGNERRLTGRHETASMDKFSWGVANRGASIRVGRDVEKEQKGYFEDRRPSSNMDPYIVTGMIVK 1077
            M N  FS  T L+  + ++F  L Q GKIMAEYIWIGGTG D+R KT+T        + + LP WNFDGSSTGQAPGEDSEVII P+AI+PDPFR   NI+V+CDCYKPNGEPI SNTR  CA IME AKDL+PWFGIEQEYTLFEADGVTPFGWPKSGYP PQGPYYC  G ENA+GR I+EAHYKACL+AG+ ISG N EVMPGQWEYQVGP VGI  GD + VSRYLL RVCE FGVI S DPKPIPGDWNGAGCHTN+ST+PMR  GG+  I +A++KLGEKH EHIAAYGEGNERRLTG+HETAS+ +FS+GVANRG S R+ R  E +  GYFEDRRP+SNMDPY+VTG IV+
Sbjct:   18 MANPIFSQKTTLNMAIQDKFSTLEQNGKIMAEYIWIGGTGADIRSKTKTLDFVP--TSPSQLPDWNFDGSSTGQAPGEDSEVIIKPKAIFPDPFRRSGNILVMCDCYKPNGEPIFSNTRAKCAEIMERAKDLLPWFGIEQEYTLFEADGVTPFGWPKSGYPLPQGPYYCGNGTENAYGRPIVEAHYKACLYAGINISGINAEVMPGQWEYQVGPSVGIDSGDHMWVSRYLLTRVCEDFGVIVSYDPKPIPGDWNGAGCHTNFSTEPMRRPGGFAVIEDALKKLGEKHAEHIAAYGEGNERRLTGKHETASITQFSYGVANRGCSCRIPRTTEADGYGYFEDRRPASNMDPYVVTGKIVE 374          
BLAST of mRNA_S-firma_F_contig1097.1280.1 vs. uniprot
Match: A0A7S2XW55_9STRA (Glutamine synthetase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XW55_9STRA)

HSP 1 Score: 534 bits (1376), Expect = 1.260e-188
Identity = 248/359 (69.08%), Postives = 289/359 (80.50%), Query Frame = 1
Query:    1 MPNTSFSSHTALSDEVLNEFRKLTQGGKIMAEYIWIGGTGQDLRCKTRTFPAKEGGYAVADLPKWNFDGSSTGQAPGEDSEVIIYPQAIYPDPFRGGDNIMVLCDCYKPNGEPIDSNTRKACAAIMEGAKDLVPWFGIEQEYTLFEADGVTPFGWPKSGYPGPQGPYYCSIGYENAFGRHIMEAHYKACLFAGVTISGTNGEVMPGQWEYQVGPCVGIAGGDELVVSRYLLQRVCEQFGVICSLDPKPIPGDWNGAGCHTNYSTKPMREEGGYTAIVEAIEKLGEKHDEHIAAYGEGNERRLTGRHETASMDKFSWGVANRGASIRVGRDVEKEQKGYFEDRRPSSNMDPYIVTGMIVK 1077
            M N  F+SHT L+  +L+ + KL QG K  AEYIWIGGTG D+R KT+T   K    + A+LP WN+DGSSTGQAPGEDSEV++ PQAI+PDPFRGGDNI+V+CDCYKP+  PID NTR     I    ++LVPWFGIEQEYTLFEADGVTPFGWPK  +P PQGPYYCS G EN++GR I+EAHY+ACL+AGV ISG NGEVMPGQWEYQVGP  GI  GD ++VSRYLL RV E FGVI SLDPKPIPGDWNGAGCHTN+ST+PMR+ GG   I++A+EKL  KH EHIAAYGEGNERRLTG+HETAS++ FS+GVANRG S R+ R VE +  GYFEDRRP+SNMDPY+VT M+ K
Sbjct:    1 MSNPVFTSHTFLNPTILDRYLKLPQGEKCQAEYIWIGGTGHDIRSKTKTLNKKVS--SPAELPIWNYDGSSTGQAPGEDSEVMLKPQAIFPDPFRGGDNIIVVCDCYKPDMTPIDGNTRAVAEDIFSQKQELVPWFGIEQEYTLFEADGVTPFGWPKHAFPAPQGPYYCSNGTENSYGRPIVEAHYRACLYAGVNISGINGEVMPGQWEYQVGPSTGIESGDHMLVSRYLLTRVAEDFGVIVSLDPKPIPGDWNGAGCHTNFSTEPMRQPGGKAVIIDALEKLKLKHAEHIAAYGEGNERRLTGKHETASIEAFSYGVANRGCSCRIPRSVEADDCGYFEDRRPASNMDPYVVTSMVFK 357          
BLAST of mRNA_S-firma_F_contig1097.1280.1 vs. uniprot
Match: W7U2J3_9STRA (Glutamine synthetase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U2J3_9STRA)

HSP 1 Score: 523 bits (1346), Expect = 1.180e-183
Identity = 243/334 (72.75%), Postives = 274/334 (82.04%), Query Frame = 1
Query:    1 MPNTSFSSHTALSDEVLNEFRKLTQGGKIMAEYIWIGGTGQDLRCKTRTFPAKEGGYAVADLPKWNFDGSSTGQAPGEDSEVIIYPQAIYPDPFRGGDNIMVLCDCYKPNGEPIDSNTRKACAAIMEGAKDLVPWFGIEQEYTLFEADGVTPFGWPKSGYPGPQGPYYCSIGYENAFGRHIMEAHYKACLFAGVTISGTNGEVMPGQWEYQVGPCVGIAGGDELVVSRYLLQRVCEQFGVICSLDPKPIPGDWNGAGCHTNYSTKPMREEGGYTAIVEAIEKLGEKHDEHIAAYGEGNERRLTGRHETASMDKFSWGVANRGASIRVGRDVEKE 1002
            M NT FS HT LS+EV   F  L QG    AEYIWIGGTGQDLRCKTRT   K       DLP WNFDGSSTGQAPG+DSEV++ PQAI+PDPFRGGDNI+V+CDCYKP+  PI  NTR  CA  M+  + LVPWFGIEQEYTLFEADGVTPFGWPK G+PG QGPYYCS+G ENAFGRHI EAHY+ACLFA + ISG NGEV+PGQWEYQVGP VGI  GD++ VSRY+LQRVCE FGVI SLDPKPIPGDWNG+GCHTN+ST+PMR+ GG+T I++A+EKL  +H EHIAAYGEGNERRLTG+HETASMD FS+GVANRGAS R+ R  EK+
Sbjct:    1 MSNTLFSMHTQLSEEVFARFMALPQGEAYQAEYIWIGGTGQDLRCKTRTLYKKTNN--PDDLPVWNFDGSSTGQAPGDDSEVLLKPQAIFPDPFRGGDNILVMCDCYKPDMTPIKGNTRLRCAEAMKKVESLVPWFGIEQEYTLFEADGVTPFGWPKGGFPGAQGPYYCSVGTENAFGRHIAEAHYRACLFAKINISGINGEVLPGQWEYQVGPSVGIESGDQMWVSRYILQRVCEAFGVIVSLDPKPIPGDWNGSGCHTNFSTEPMRKPGGFTIIIDALEKLRARHAEHIAAYGEGNERRLTGKHETASMDSFSYGVANRGASCRIPRAAEKD 332          
BLAST of mRNA_S-firma_F_contig1097.1280.1 vs. uniprot
Match: A0A485LAW0_9STRA (Glutamine synthetase n=5 Tax=Aphanomyces TaxID=100860 RepID=A0A485LAW0_9STRA)

HSP 1 Score: 520 bits (1338), Expect = 6.380e-183
Identity = 241/353 (68.27%), Postives = 279/353 (79.04%), Query Frame = 1
Query:   34 LSDEVLNEFRKLTQGGKIMAEYIWIGGTGQDLRCKTRTFPAKEGGYAVADLPKWNFDGSSTGQAPGEDSEVIIYPQAIYPDPFRGGDNIMVLCDCYKPNGEPIDSNTRKACAAIMEGAKDLVPWFGIEQEYTLFEADGVTPFGWPKSGYPGPQGPYYCSIGYENAFGRHIMEAHYKACLFAGVTISGTNGEVMPGQWEYQVGPCVGIAGGDELVVSRYLLQRVCEQFGVICSLDPKPIPGDWNGAGCHTNYSTKPMREEGGYTAIVEAIEKLGEKHDEHIAAYGEGNERRLTGRHETASMDKFSWGVANRGASIRVGRDVEKEQKGYFEDRRPSSNMDPYIVTGMIVKVRRVN 1092
            L  +V + +  L  G  I AEYIW+GG+G+DLRCKTRT        +V +LP WNFDGSSTGQAPGEDSEV++ P AIY DPFRGG++I+VLCDCYKP+  PI SNTR   A +M+ +    PWFGIEQEYTLFEAD VTP+GWPK GYPGPQGPYYC  G  +AFGR I +AHY+ACLFAG+ +SG N EVMPGQWEYQVGPCVGIA GD++ +SRY+L RVCE FGVI S DPKPIPGDWNGAGCHTN STK MRE GG   I+EA+EK+  KH EHIAAYG GNERRLTGRHETAS+DKF++GVANRGASIR+ R  E + KGYFEDRRP+SNMDPY VT  I+K   +N
Sbjct:    4 LDRDVYDRYMSLDTGNFIQAEYIWVGGSGEDLRCKTRTLDKLPA--SVEELPIWNFDGSSTGQAPGEDSEVLLKPAAIYKDPFRGGNHILVLCDCYKPDMTPIPSNTRYDAARVMKASASHEPWFGIEQEYTLFEADKVTPYGWPKGGYPGPQGPYYCGAGAHSAFGRLIADAHYRACLFAGIRVSGINAEVMPGQWEYQVGPCVGIASGDQMWISRYILLRVCEDFGVIVSFDPKPIPGDWNGAGCHTNVSTKAMRENGGIAVIIEALEKMKLKHKEHIAAYGTGNERRLTGRHETASIDKFTYGVANRGASIRIPRSTEADGKGYFEDRRPASNMDPYTVTSRILKTIILN 354          
BLAST of mRNA_S-firma_F_contig1097.1280.1 vs. uniprot
Match: A0A7S0P9X0_CAFRO (Glutamine synthetase n=3 Tax=Sar TaxID=2698737 RepID=A0A7S0P9X0_CAFRO)

HSP 1 Score: 520 bits (1338), Expect = 1.570e-182
Identity = 236/353 (66.86%), Postives = 278/353 (78.75%), Query Frame = 1
Query:   34 LSDEVLNEFRKLTQGGKIMAEYIWIGGTGQDLRCKTRTFPAKEGGYAVADLPKWNFDGSSTGQAPGEDSEVIIYPQAIYPDPFRGGDNIMVLCDCYKPNGEPIDSNTRKACAAIMEGAKDLVPWFGIEQEYTLFEADGVTPFGWPKSGYPGPQGPYYCSIGYENAFGRHIMEAHYKACLFAGVTISGTNGEVMPGQWEYQVGPCVGIAGGDELVVSRYLLQRVCEQFGVICSLDPKPIPGDWNGAGCHTNYSTKPMREEGGYTAIVEAIEKLGEKHDEHIAAYGEGNERRLTGRHETASMDKFSWGVANRGASIRVGRDVEKEQKGYFEDRRPSSNMDPYIVTGMIVKVRRVN 1092
            LS +VL+ +  L   GK+ AEYIWIGG+G+D+RCKTRTF       +V +LP+WNFDGSST QA G DSEVI+ P  I PDPFRGG++I+VLC+CY+P+G    +NTR   AA     +   PWFG+EQEYTLFEADG TP GWPK GYPGPQGPYYCS G ENAFGR I +AHY+ACLFAG+ +SG N EVMPGQWEYQVGPC+GI  GD + +SRY++QRVCE FGV+CS DPKPIPGDWNGAGCH NYSTKPMRE GGY AI+EAIEKLG KH EH+A YG GNERRLTG HETA +DKFS+GVANRGAS+R+ R  E +  GYFEDRRP+SNMDPY+VT  I +   ++
Sbjct:   31 LSHDVLSRYMSLDTRGKVQAEYIWIGGSGEDVRCKTRTFDKVPA--SVEELPEWNFDGSSTKQAEGHDSEVILKPVRIVPDPFRGGEHILVLCECYRPDGTAHPTNTRAPAAAAFAKDEASAPWFGVEQEYTLFEADGRTPLGWPKGGYPGPQGPYYCSAGAENAFGRAIADAHYRACLFAGIKVSGINAEVMPGQWEYQVGPCLGIESGDHMWLSRYIMQRVCEDFGVVCSFDPKPIPGDWNGAGCHVNYSTKPMREAGGYAAIIEAIEKLGAKHLEHMAVYGRGNERRLTGAHETAPIDKFSYGVANRGASVRIPRTTEADDCGYFEDRRPASNMDPYVVTAKIFQTTHLD 381          
BLAST of mRNA_S-firma_F_contig1097.1280.1 vs. uniprot
Match: K3WW32_GLOUD (Glutamine synthetase n=2 Tax=Pythiaceae TaxID=4782 RepID=K3WW32_GLOUD)

HSP 1 Score: 516 bits (1330), Expect = 1.050e-181
Identity = 238/353 (67.42%), Postives = 280/353 (79.32%), Query Frame = 1
Query:   34 LSDEVLNEFRKLTQGGKIMAEYIWIGGTGQDLRCKTRTFPAKEGGYAVADLPKWNFDGSSTGQAPGEDSEVIIYPQAIYPDPFRGGDNIMVLCDCYKPNGEPIDSNTRKACAAIMEGAKDLVPWFGIEQEYTLFEADGVTPFGWPKSGYPGPQGPYYCSIGYENAFGRHIMEAHYKACLFAGVTISGTNGEVMPGQWEYQVGPCVGIAGGDELVVSRYLLQRVCEQFGVICSLDPKPIPGDWNGAGCHTNYSTKPMREEGGYTAIVEAIEKLGEKHDEHIAAYGEGNERRLTGRHETASMDKFSWGVANRGASIRVGRDVEKEQKGYFEDRRPSSNMDPYIVTGMIVKVRRVN 1092
            L   V + +  L   G ++AEY+WIGG+GQDLRCKT+T  A     +V DLP WNFDGSSTGQAPG+DSEV++ P AI+ DPFRGG NI+VLCDC KP+  PI +NTR     +M+ A+   PWFG+EQEYTLFEADGVTP+GWPK G+PGPQGPYYC  G  +AFGR I++AHYKACL+AGV +SG N EVMPGQWE+QVGPC GIA GD L ++RY+L RVCE FGV  S DPKPIPGDWNGAGCHTNYSTK MRE+GG   I+EAIEKL  KH  HIAAYGEGNERRLTGRHETAS+++FS+GVANRGAS+R+ R+ E   KGYFEDRRP+SNMDPY+VT  IVK   +N
Sbjct:    4 LDRAVYDSYMALEVDGPVLAEYVWIGGSGQDLRCKTKTLAASP--KSVTDLPIWNFDGSSTGQAPGDDSEVLLRPVAIFKDPFRGGKNILVLCDCLKPDMTPIANNTRADADRVMKAAEGEEPWFGLEQEYTLFEADGVTPYGWPKGGFPGPQGPYYCGAGAHSAFGRLIVDAHYKACLYAGVQVSGINAEVMPGQWEFQVGPCTGIASGDHLWIARYILLRVCEDFGVNVSWDPKPIPGDWNGAGCHTNYSTKAMREDGGMAVIIEAIEKLKLKHKVHIAAYGEGNERRLTGRHETASIEQFSYGVANRGASVRIPREAEAHGKGYFEDRRPASNMDPYVVTSRIVKTTVLN 354          
BLAST of mRNA_S-firma_F_contig1097.1280.1 vs. uniprot
Match: D8LSG6_ECTSI (Glutamine synthetase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LSG6_ECTSI)

HSP 1 Score: 516 bits (1330), Expect = 6.550e-181
Identity = 238/346 (68.79%), Postives = 278/346 (80.35%), Query Frame = 1
Query:   34 LSDEVLNEFRKLTQGGKIMAEYIWIGGTGQDLRCKTRTFPAKEGGYAVADLPKWNFDGSSTGQAPGEDSEVIIYPQAIYPDPFRGGDNIMVLCDCYKPNGEPIDSNTRKACAAIMEGAKDLVPWFGIEQEYTLFEADGVTPFGWPKSGYPGPQGPYYCSIGYENAFGRHIMEAHYKACLFAGVTISGTNGEVMPGQWEYQVGPCVGIAGGDELVVSRYLLQRVCEQFGVICSLDPKPIPGDWNGAGCHTNYSTKPMREEGGYTAIVEAIEKLGEKHDEHIAAYGEGNERRLTGRHETASMDKFSWGVANRGASIRVGRDVEKEQKGYFEDRRPSSNMDPYIVTGMI 1071
            L   V++ +  L QG ++ AEY+WIGGTG DLRCKTRT   K G  AV DLP WN+DGSS GQAPG+DSEV++ P  IYPDPFRGGDNI+VLC+   P GEPI SNTR    A  + A  L PWFGIEQEYTLF+ D VTPFGWPK G PGPQGPYYCS+G+ENA+GR + EAHY+AC+++ + ISG NGEVMPGQWEYQVGP VGI G D+LV+SR+LLQRV E   V  SLDPKPIPGDWNGAGCHTN+ST+ MR+EGG+  IVEA+EKLG++H +HI AYGEGNERRLTG HETA+M+ F +GVA+RGASIR+ R  E EQKGYFEDRRPSSNMDPY+V GMI
Sbjct:   52 LDQGVMDRYMALPQGTRVQAEYVWIGGTGLDLRCKTRTLEEKPG--AVNDLPLWNYDGSSCGQAPGDDSEVMLRPVKIYPDPFRGGDNIIVLCETCLPTGEPIPSNTRAKARASFDAAPGLEPWFGIEQEYTLFDKDMVTPFGWPKDGEPGPQGPYYCSVGFENAYGRGVAEAHYRACMYSNIPISGINGEVMPGQWEYQVGPAVGINGADDLVMSRFLLQRVAEDLQVAVSLDPKPIPGDWNGAGCHTNFSTEKMRQEGGFKEIVEAVEKLGKRHKQHIEAYGEGNERRLTGLHETANMNTFKYGVADRGASIRIPRAAEAEQKGYFEDRRPSSNMDPYVVCGMI 395          
BLAST of mRNA_S-firma_F_contig1097.1280.1 vs. uniprot
Match: A0A067CFX7_SAPPC (Glutamine synthetase n=6 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CFX7_SAPPC)

HSP 1 Score: 513 bits (1322), Expect = 1.730e-180
Identity = 239/348 (68.68%), Postives = 274/348 (78.74%), Query Frame = 1
Query:   34 LSDEVLNEFRKLTQGGKIMAEYIWIGGTGQDLRCKTRTFPAKEGGYAVADLPKWNFDGSSTGQAPGEDSEVIIYPQAIYPDPFRGGDNIMVLCDCYKPNGEPIDSNTRKACAAIMEGAKDLVPWFGIEQEYTLFEADGVTPFGWPKSGYPGPQGPYYCSIGYENAFGRHIMEAHYKACLFAGVTISGTNGEVMPGQWEYQVGPCVGIAGGDELVVSRYLLQRVCEQFGVICSLDPKPIPGDWNGAGCHTNYSTKPMREEGGYTAIVEAIEKLGEKHDEHIAAYGEGNERRLTGRHETASMDKFSWGVANRGASIRVGRDVEKEQKGYFEDRRPSSNMDPYIVTGMIVK 1077
            L   V + +  L  G  I AEY+WIGG+GQDLRCKTRT        +VADLP WNFDGSST QAPG DSEV++ P AIY DPFR G++I+VLCDCYKP+  PI +NTR   A +ME AK  VPWFGIEQEYTLFE D VTP+GWPK G+PGPQGPYYC  G  +AFGR I +AHY+ACL+AGV +SG N EVMPGQWEYQVGPC GI  GD+L +SRY++ RVCE FGVI S DPKPIPGDWNGAGCHTN STK MRE+GG   I+EA+EKL  KH  HIA YG GNERRLTGRHETAS+D+FS+GVANRGASIR+ R  E + KGYFEDRRP+SNMDPY+VTG I+K
Sbjct:    4 LDRAVYDSYASLDTGNYIQAEYVWIGGSGQDLRCKTRTLDKAP--TSVADLPIWNFDGSSTDQAPGADSEVMLKPAAIYKDPFRRGNHILVLCDCYKPDMTPIPTNTRFDAARVMEAAKAHVPWFGIEQEYTLFEKDQVTPYGWPKGGFPGPQGPYYCGAGAHSAFGRLIADAHYRACLYAGVRVSGINAEVMPGQWEYQVGPCTGIESGDQLWISRYIMLRVCEDFGVIVSFDPKPIPGDWNGAGCHTNVSTKAMREDGGMAKIIEALEKLKLKHKVHIAVYGTGNERRLTGRHETASIDQFSYGVANRGASIRIPRQAEADGKGYFEDRRPASNMDPYVVTGRIIK 349          
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig1097.1280.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FPA6_ECTSI2.370e-25891.69Glutamine synthetase n=3 Tax=Ectocarpus TaxID=2879... [more]
A0A835YJ88_9STRA1.220e-22680.50Glutamine synthetase n=3 Tax=Tribonema minus TaxID... [more]
A0A7S3XXT5_HETAK2.230e-19371.87Glutamine synthetase n=3 Tax=Heterosigma akashiwo ... [more]
A0A7S2XW55_9STRA1.260e-18869.08Glutamine synthetase n=1 Tax=Fibrocapsa japonica T... [more]
W7U2J3_9STRA1.180e-18372.75Glutamine synthetase n=2 Tax=Monodopsidaceae TaxID... [more]
A0A485LAW0_9STRA6.380e-18368.27Glutamine synthetase n=5 Tax=Aphanomyces TaxID=100... [more]
A0A7S0P9X0_CAFRO1.570e-18266.86Glutamine synthetase n=3 Tax=Sar TaxID=2698737 Rep... [more]
K3WW32_GLOUD1.050e-18167.42Glutamine synthetase n=2 Tax=Pythiaceae TaxID=4782... [more]
D8LSG6_ECTSI6.550e-18168.79Glutamine synthetase n=2 Tax=Ectocarpus TaxID=2879... [more]
A0A067CFX7_SAPPC1.730e-18068.68Glutamine synthetase n=6 Tax=Saprolegniaceae TaxID... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_F_contig1097contigS-firma_F_contig1097:13277..16638 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef902022-09-19
OGS1.0 of Sphaerotrichia firma ET2_F female2021-02-24
Properties
Property NameValue
Seed ortholog2880.D7FPA6
PFAMsGln-synt_C,Gln-synt_N
Max annot lvl2759|Eukaryota
KEGG rclassRC00010,RC02798
KEGG koko:K01915
KEGG ReactionR00253
KEGG Pathwayko00220,ko00250,ko00630,ko00910,ko01100,ko01120,ko01230,ko02020,ko04217,ko04724,ko04727,map00220,map00250,map00630,map00910,map01100,map01120,map01230,map02020,map04217,map04724,map04727
Evalue3.89e-259
EggNOG OGsCOG0174@1|root,KOG0683@2759|Eukaryota
EC6.3.1.2
Descriptionglutamine biosynthetic process
COG categoryE
BRITEko00000,ko00001,ko01000,ko04147
Hectar predicted targeting categoryother localisation
Exons5
Model size1113
Cds size1113
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_F_contig1097.1280.1prot_S-firma_F_contig1097.1280.1Sphaerotrichia firma ET2_F femalepolypeptideS-firma_F_contig1097 13277..16638 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815641.1162324-CDS-S-firma_F_contig1097:13276..134611622815641.1162324-CDS-S-firma_F_contig1097:13276..13461Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig1097 13277..13461 +
1696949472.6750395-CDS-S-firma_F_contig1097:13276..134611696949472.6750395-CDS-S-firma_F_contig1097:13276..13461Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig1097 13277..13461 +
1622815641.1268625-CDS-S-firma_F_contig1097:14590..147891622815641.1268625-CDS-S-firma_F_contig1097:14590..14789Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig1097 14591..14789 +
1696949472.6937904-CDS-S-firma_F_contig1097:14590..147891696949472.6937904-CDS-S-firma_F_contig1097:14590..14789Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig1097 14591..14789 +
1622815641.1401134-CDS-S-firma_F_contig1097:15191..154401622815641.1401134-CDS-S-firma_F_contig1097:15191..15440Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig1097 15192..15440 +
1696949472.702671-CDS-S-firma_F_contig1097:15191..154401696949472.702671-CDS-S-firma_F_contig1097:15191..15440Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig1097 15192..15440 +
1622815641.149972-CDS-S-firma_F_contig1097:15780..160351622815641.149972-CDS-S-firma_F_contig1097:15780..16035Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig1097 15781..16035 +
1696949472.7119586-CDS-S-firma_F_contig1097:15780..160351696949472.7119586-CDS-S-firma_F_contig1097:15780..16035Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig1097 15781..16035 +
1622815641.1593091-CDS-S-firma_F_contig1097:16413..166381622815641.1593091-CDS-S-firma_F_contig1097:16413..16638Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig1097 16414..16638 +
1696949472.7217717-CDS-S-firma_F_contig1097:16413..166381696949472.7217717-CDS-S-firma_F_contig1097:16413..16638Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig1097 16414..16638 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-firma_F_contig1097.1280.1

>prot_S-firma_F_contig1097.1280.1 ID=prot_S-firma_F_contig1097.1280.1|Name=mRNA_S-firma_F_contig1097.1280.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=371bp
MPNTSFSSHTALSDEVLNEFRKLTQGGKIMAEYIWIGGTGQDLRCKTRTF
PAKEGGYAVADLPKWNFDGSSTGQAPGEDSEVIIYPQAIYPDPFRGGDNI
MVLCDCYKPNGEPIDSNTRKACAAIMEGAKDLVPWFGIEQEYTLFEADGV
TPFGWPKSGYPGPQGPYYCSIGYENAFGRHIMEAHYKACLFAGVTISGTN
GEVMPGQWEYQVGPCVGIAGGDELVVSRYLLQRVCEQFGVICSLDPKPIP
GDWNGAGCHTNYSTKPMREEGGYTAIVEAIEKLGEKHDEHIAAYGEGNER
RLTGRHETASMDKFSWGVANRGASIRVGRDVEKEQKGYFEDRRPSSNMDP
YIVTGMIVKVRRVNRVARWS*
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mRNA from alignment at S-firma_F_contig1097:13277..16638+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-firma_F_contig1097.1280.1 ID=mRNA_S-firma_F_contig1097.1280.1|Name=mRNA_S-firma_F_contig1097.1280.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=3362bp|location=Sequence derived from alignment at S-firma_F_contig1097:13277..16638+ (Sphaerotrichia firma ET2_F female)
ATGCCGAACACTTCTTTCTCCAGCCACACCGCCCTCTCCGATGAGGTGCT CAACGAGTTCCGGAAGCTGACCCAGGGCGGCAAGATCATGGCCGAGTACA TCTGGATCGGCGGCACCGGGCAGGACCTCCGCTGCAAGACCCGCACCTTC CCGGCCAAGGAGGGAGGCTACGCCGTGGCGGACCTGTGAGTGTGGTGCCC TCAATCAACCCGAACCCTTACGAGGCGGTCTGTGCCGGTAAATCAATCCA TGGTTGTCTCCATCTCCCCTTTTTTTTTCTTTTTTTTTCGTAGATTGGTT CGGTGTTCGTCACCCGGTTCGGATGGCACGTATGTAATGTACAGCAGCAG TCATGGGATATAGACTACGTATTTTTGGTACGCGAATAACATACCCGCAT AGAACCAATCGGAGTCCTGTCTTGCGCGGGCCGTAGCTTCCGTCCCGCGG GTTTTTGGGTCGGGGGATGGAATGTGCGTCGGACGAAAGCGCGCCTCTTT GTGTCGTGTACTGCTGTTGTTGTGGTCTGAAAGCGCTAAGGGCGCGCGCG CGCGCGCAGAGCAGCGAAGAGGTACGGCAGAGCAGGGGGCATACGCCCAT TGACACGTGTTAGTTGCGCGAACGGTTTGGCATGCTTGTTAGCGGCCACG CTCCTGCGGAAACAACGCGCTGGCCTGGTGCACAACCAAAAAGTCTTGGG CAACACATGGTCTAAGATCTATACGTCGACTATGTAGATGACATTCCGTC TTTTTTTCTACATGAAAAATGCCGTGTTCTGGAGGAGTGTTTCACGACCG TGACGCATCTTTCGGTGTTTTCGTTGTCACATCAGAGAATTTTTGGGTTG TTTCTTGCTTGCATGGAATGACGCTCTCTCTGAACTCAACTGGAACTGCT ACTGTTCCGAGGCACAACAGCAGCAGCATCTCAAATCTCGTGTGTTGCAT GCATCTAACCTCCGGCTATTCCTCTCTGATGGAAGCTCTCAACGGACAAT TTCGGCAGACCGGAAGGACGTTGTAGATTTGTGCATACAACAGCTGTTTT TTTGCGGCAGGTCGGCCTTCCTTTATGCCCTCTCACCGGCGCTCTGCTTC TGTGGAGGAGCATTCCAAGCTCGTGCTCAGGAGCATTCCAAGCTCGAGCA GTGTGCGCGCACATCAAACACAGCTAAATAGTAGCTCCCCAGCTTGCTTT TCCCGCAATTTTTTTGCAGGCGCCCAACGACTGAATCTCTACTTCAATGT AACGAACTCTCACTACCAACGTTGTTCTCGACGTCTCTTGGATGTTTCTG TCGTCTCGTCTCAGGCCCAAGTGGAACTTCGACGGTTCCTCGACCGGCCA GGCGCCCGGGGAGGACTCGGAGGTGATCATCTACCCCCAGGCCATCTACC CGGACCCCTTCCGCGGCGGCGACAACATCATGGTGCTGTGCGACTGCTAC AAGCCCAACGGCGAGCCCATCGACAGCAACACCCGCAAGGCGTGCGCCGC CATCATGGAGGGGGTGAGAGAGAGTGTGTGTTGAGCGTTGAATCGCAGCT CTTTGAAGGAGGTGTTGCGCGCGCATCACTCGGGGCGGGGGTGTTTGTGT TCATTAGTTTACTCTTGCCTCCTAAACAGCACCCAAACAAAATTATTCTT CTTCTCTAAATTCCGGTTTTGTCCTGTTTTTCGTTTTTTTTTCTGCGGCC CAACAGCCACAGGGCACACACGTGCTCAAGTGTGTCCGTCGACGTGTCTT AGTTCCTTTTTTGCTCCGTTTTCACGACGTCCCTAAGTTTATCTCTCTGA TCAACTCTGATTTCAAAACAATGACGATCCACGACACTCTCAGCAAGCCC ATATGCACCCTAATCCCCCCCCCCCGCCCCGCCACTTCGAAATCCACCCC GCGCCTCCTATTTAGGCCAAGGACCTGGTGCCGTGGTTCGGTATCGAGCA GGAGTACACCCTGTTCGAGGCGGACGGCGTGACCCCCTTCGGCTGGCCCA AGAGCGGCTACCCGGGACCCCAGGGCCCTTACTACTGCTCCATCGGCTAC GAGAACGCCTTCGGCCGCCACATCATGGAGGCGCACTACAAGGCGTGCCT GTTCGCCGGCGTAACCATCTCCGGGACCAACGGGGAGGTCATGCCCGGCC AGTGGGAGTACCAGGTAAGAAGCGAGGAACGGAGAGGGGGGAGAGGCTTG TCGTTGGTGATGTCATCGTATCGCTGCTCGTGTGTTTCGAAACCAGCCGT CCTTGAACCTGCCTCCCTCTCTCTCGCGCGAGCGCGAGCGGCGCGCCCGA GCGAACCAGTTGTTCTCGGTCTCACTCGATGGCAGTCGTCGCCGTGTCGG TCGGTTGCGCGCCTACCATGATATCCCTTTTCACCAATCAGGTTGGCCGC TCCACCAGGCTTCGAAGTAGTCCTTAACGAAAGTCGTCGCCGTCCCACAC AAGCTCGCGCCTTATCATCCGCCCGCTGTGCCCCCCCCCGTTTGTTTCGC TCAGGTGGGCCCCTGCGTGGGTATCGCCGGAGGTGACGAGCTCGTCGTCT CCCGCTACCTGCTCCAGCGCGTGTGCGAGCAGTTCGGCGTGATCTGCTCC CTCGACCCCAAGCCCATCCCGGGAGACTGGAACGGGGCCGGGTGCCACAC CAACTACTCCACCAAGCCCATGCGCGAGGAGGGCGGCTACACCGCCATCG TCGAGGCCATCGAGAAGCTCGGCGAGAAGCACGACGAGCACATCGCCGCC TACGGCGAGGTGCGTTGGGTGGACTTTGCTGTCTTGATTTTTTTTTTTTT TTTGGGGGGGGGGGGGTGGTCTCTCGGCGCTCCGATTCCAGCTGCTGCTT CCTGCTGTTGGGTGGTCTCTCGGCGCTCCGATTCCAGCTGCTGCTTCCTG CTGCTGGCGGTTTGTGCCGGCCGCCGTTTTTTGCGGCCACCCGTGTAGGG CCATCCTTTGCCCCTCGTCGGCATCCTGCGGCAGTAGCACTCCGTCTGTT GTGTCTTCCTGCTGGTACCTTGGCTGCCTCAGACAACCCAACATGTGTGT AGCTCGTTTGTCTGTCTCTCTTGCGCCCATGTCCTCCTCCTCACACGACG AACGCTTCCCCGAATCTCACCGTCGCGTGAATAACAGGGTAACGAGCGCC GTCTCACCGGGCGCCACGAGACCGCGTCCATGGACAAGTTCTCGTGGGGT GTTGCCAACCGCGGCGCGTCCATCCGCGTCGGCCGCGATGTCGAGAAGGA GCAGAAGGGTTACTTCGAGGACCGCAGGCCTTCGTCCAACATGGACCCTT ACATCGTCACCGGCATGATCGTCAAGGTGAGGAGAGTAAACAGAGTGGCG CGTTGGAGTTGA
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Coding sequence (CDS) from alignment at S-firma_F_contig1097:13277..16638+

>mRNA_S-firma_F_contig1097.1280.1 ID=mRNA_S-firma_F_contig1097.1280.1|Name=mRNA_S-firma_F_contig1097.1280.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=2226bp|location=Sequence derived from alignment at S-firma_F_contig1097:13277..16638+ (Sphaerotrichia firma ET2_F female)
ATGCCGAACACTTCTTTCTCCAGCCACACCGCCCTCTCCGATGAGGTGCT
CAACGAGTTCCGGAAGCTGACCCAGGGCGGCAAGATCATGGCCGAGTACA
TCTGGATCGGCGGCACCGGGCAGGACCTCCGCTGCAAGACCCGCACCTTC
CCGGCCAAGGAGGGAGGCTACGCCGTGGCGGACCTATGCCGAACACTTCT
TTCTCCAGCCACACCGCCCTCTCCGATGAGGTGCTCAACGAGTTCCGGAA
GCTGACCCAGGGCGGCAAGATCATGGCCGAGTACATCTGGATCGGCGGCA
CCGGGCAGGACCTCCGCTGCAAGACCCGCACCTTCCCGGCCAAGGAGGGA
GGCTACGCCGTGGCGGACCTGCCCAAGTGGAACTTCGACGGTTCCTCGAC
CGGCCAGGCGCCCGGGGAGGACTCGGAGGTGATCATCTACCCCCAGGCCA
TCTACCCGGACCCCTTCCGCGGCGGCGACAACATCATGGTGCTGTGCGAC
TGCTACAAGCCCAACGGCGAGCCCATCGACAGCAACACCCGCAAGGCGTG
CGCCGCCATCATGGAGGGGGCCCAAGTGGAACTTCGACGGTTCCTCGACC
GGCCAGGCGCCCGGGGAGGACTCGGAGGTGATCATCTACCCCCAGGCCAT
CTACCCGGACCCCTTCCGCGGCGGCGACAACATCATGGTGCTGTGCGACT
GCTACAAGCCCAACGGCGAGCCCATCGACAGCAACACCCGCAAGGCGTGC
GCCGCCATCATGGAGGGGGCCAAGGACCTGGTGCCGTGGTTCGGTATCGA
GCAGGAGTACACCCTGTTCGAGGCGGACGGCGTGACCCCCTTCGGCTGGC
CCAAGAGCGGCTACCCGGGACCCCAGGGCCCTTACTACTGCTCCATCGGC
TACGAGAACGCCTTCGGCCGCCACATCATGGAGGCGCACTACAAGGCGTG
CCTGTTCGCCGGCGTAACCATCTCCGGGACCAACGGGGAGGTCATGCCCG
GCCAGTGGGAGTACCAGGCCAAGGACCTGGTGCCGTGGTTCGGTATCGAG
CAGGAGTACACCCTGTTCGAGGCGGACGGCGTGACCCCCTTCGGCTGGCC
CAAGAGCGGCTACCCGGGACCCCAGGGCCCTTACTACTGCTCCATCGGCT
ACGAGAACGCCTTCGGCCGCCACATCATGGAGGCGCACTACAAGGCGTGC
CTGTTCGCCGGCGTAACCATCTCCGGGACCAACGGGGAGGTCATGCCCGG
CCAGTGGGAGTACCAGGTGGGCCCCTGCGTGGGTATCGCCGGAGGTGACG
AGCTCGTCGTCTCCCGCTACCTGCTCCAGCGCGTGTGCGAGCAGTTCGGC
GTGATCTGCTCCCTCGACCCCAAGCCCATCCCGGGAGACTGGAACGGGGC
CGGGTGCCACACCAACTACTCCACCAAGCCCATGCGCGAGGAGGGCGGCT
ACACCGCCATCGTCGAGGCCATCGAGAAGCTCGGCGAGAAGCACGACGAG
CACATCGCCGCCTACGGCGAGGTGGGCCCCTGCGTGGGTATCGCCGGAGG
TGACGAGCTCGTCGTCTCCCGCTACCTGCTCCAGCGCGTGTGCGAGCAGT
TCGGCGTGATCTGCTCCCTCGACCCCAAGCCCATCCCGGGAGACTGGAAC
GGGGCCGGGTGCCACACCAACTACTCCACCAAGCCCATGCGCGAGGAGGG
CGGCTACACCGCCATCGTCGAGGCCATCGAGAAGCTCGGCGAGAAGCACG
ACGAGCACATCGCCGCCTACGGCGAGGGTAACGAGCGCCGTCTCACCGGG
CGCCACGAGACCGCGTCCATGGACAAGTTCTCGTGGGGTGTTGCCAACCG
CGGCGCGTCCATCCGCGTCGGCCGCGATGTCGAGAAGGAGCAGAAGGGTT
ACTTCGAGGACCGCAGGCCTTCGTCCAACATGGACCCTTACATCGTCACC
GGCATGATCGTCAAGGTGAGGAGAGTAAACAGAGTGGCGCGTTGGAGTTG
AGGTAACGAGCGCCGTCTCACCGGGCGCCACGAGACCGCGTCCATGGACA
AGTTCTCGTGGGGTGTTGCCAACCGCGGCGCGTCCATCCGCGTCGGCCGC
GATGTCGAGAAGGAGCAGAAGGGTTACTTCGAGGACCGCAGGCCTTCGTC
CAACATGGACCCTTACATCGTCACCGGCATGATCGTCAAGGTGAGGAGAG
TAAACAGAGTGGCGCGTTGGAGTTGA
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