mRNA_S-firma_F_contig10963.1278.1 (mRNA) Sphaerotrichia firma ET2_F female
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Overview
Homology
BLAST of mRNA_S-firma_F_contig10963.1278.1 vs. uniprot
Match: A0A812NQC8_9DINO (Tnfaip1 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812NQC8_9DINO) HSP 1 Score: 103 bits (257), Expect = 5.310e-25 Identity = 57/124 (45.97%), Postives = 76/124 (61.29%), Query Frame = 1
Query: 7 FEDSLQSRWKQDT---------VTDKPRLKLNIGGQEFEVASATLGNADAGSLLAALASPRPPMDSD--PSGAFFFDRDWWQFRLVLQFLREGDACLPAAKAVLKQLYREAAFWRLPSLQDAVR 345
ED+L+SRW ++ R+ +N+GGQ FE + L D GS LA LA RPP D D P GA+FF+RDWW FR VLQ+LREG+A LP +K +LK LY EA ++ + L+ +VR
Sbjct: 1 LEDALKSRWYEEASEGSASGGAADGSKRVLINVGGQLFETTARVL-RRDPGSALAQLAD-RPPPDEDACPDGAWFFERDWWTFRFVLQWLREGEASLPRSKPLLKALYAEARYFGMQGLRASVR 122
BLAST of mRNA_S-firma_F_contig10963.1278.1 vs. uniprot
Match: A0A5A8CLX3_CAFRO (BTB domain-containing protein n=2 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8CLX3_CAFRO) HSP 1 Score: 103 bits (258), Expect = 1.590e-24 Identity = 58/126 (46.03%), Postives = 77/126 (61.11%), Query Frame = 1
Query: 1 RSFEDSLQSRWKQDT---------VTDKPRLKLNIGGQEFEVASATLGNADAGSLLAALASPRPPMDSD--PSGAFFFDRDWWQFRLVLQFLREGDACLPAAKAVLKQLYREAAFWRLPSLQDAVR 345
R ED+L+SRW ++ R+ +N+GGQ FE + L D GS LA LA RPP D D P GA+FF+RDWW FR VLQ+LREG+A LP +K +LK LY EA ++ + L+ +VR
Sbjct: 74 RWLEDALKSRWYEEASEGSASGGAADGSKRVLINVGGQLFETTARVL-RRDPGSALAQLAD-RPPPDEDACPDGAWFFERDWWTFRFVLQWLREGEASLPRSKPLLKALYAEARYFGMQGLRASVR 197
BLAST of mRNA_S-firma_F_contig10963.1278.1 vs. uniprot
Match: A0A7S3LJB0_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3LJB0_9STRA) HSP 1 Score: 100 bits (248), Expect = 2.950e-23 Identity = 53/118 (44.92%), Postives = 73/118 (61.86%), Query Frame = 1
Query: 1 RSFEDSLQSRWKQDTV---TDKPRLKLNIGGQEFEVASATLGNADAGSLLAALASPRPPMDSDPSGAFFFDRDWWQFRLVLQFLREGDACLPAAKAVLKQLYREAAFWRLPSLQDAVR 345
++FE + +S W Q T+ +D R+KLN+GG+ FE L D GSLLAAL S P+ D G F DRDWW FR +L FLR+G +P + +L QLYREA F+ L +++ A+R
Sbjct: 66 KNFEFARKSSWFQSTLLPTSDLRRIKLNVGGKLFETTERVL-KRDPGSLLAALVSDDAPLKEDEEGTIFIDRDWWLFRFLLAFLRDGR--IPKDQDLLSQLYREAGFYNLETIRHAIR 180
BLAST of mRNA_S-firma_F_contig10963.1278.1 vs. uniprot
Match: A0A7S3ZZW9_9STRA (Hypothetical protein (Fragment) n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZZW9_9STRA) HSP 1 Score: 95.1 bits (235), Expect = 2.940e-21 Identity = 55/101 (54.46%), Postives = 66/101 (65.35%), Query Frame = 1
Query: 46 VTDKPRLKLNIGGQEFEVASATLGNADAGSLLAALASPRPPMDSDPSG--AFFFDRDWWQFRLVLQFLREGDACLPAAKAVLKQLYREAAFWRLPSLQDAV 342
T + RL+LN+GGQ FE+ A L N D SLLAALA+ P+ D G + DRDWW FR VL FLR+G LPA+ ++ LYREAAFWRL SLQ AV
Sbjct: 107 ATPQKRLRLNVGGQIFEINVAKLDN-DPDSLLAALAAEDCPLFGDDRGKRVAYVDRDWWTFRHVLAFLRDG--VLPASPSLALPLYREAAFWRLGSLQRAV 204
BLAST of mRNA_S-firma_F_contig10963.1278.1 vs. uniprot
Match: A0A835YWA5_9STRA (BTB domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWA5_9STRA) HSP 1 Score: 95.5 bits (236), Expect = 4.150e-21 Identity = 47/94 (50.00%), Postives = 63/94 (67.02%), Query Frame = 1
Query: 61 RLKLNIGGQEFEVASATLGNADAGSLLAALASPRPPMDSDPSGAFFFDRDWWQFRLVLQFLREGDACLPAAKAVLKQLYREAAFWRLPSLQDAV 342
R+KLN+GGQ FEV++ L D SLLAAL P+ +D G + DRDWW FR +L+FLR+G LP+ + +L QLYREA +WR SL+ A+
Sbjct: 125 RVKLNVGGQVFEVSAPVL-QRDPHSLLAALCDESCPLKTDTDGTIYVDRDWWLFRYLLKFLRDG--ALPSDRTLLAQLYREAGYWRCSSLRTAI 215
BLAST of mRNA_S-firma_F_contig10963.1278.1 vs. uniprot
Match: A0A7S3ME34_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3ME34_9STRA) HSP 1 Score: 94.0 bits (232), Expect = 9.060e-21 Identity = 53/124 (42.74%), Postives = 69/124 (55.65%), Query Frame = 1
Query: 13 DSLQSRWKQDTVTDKP-------------RLKLNIGGQEFEVASATLGNADAGSLLAALASPRPPMDSDPSGAFF-FDRDWWQFRLVLQFLREGDACLPAAKAVLKQLYREAAFWRLPSLQDAV 342
D ++ R K T+ +P + +N+GG FE + L D SLLA L SP PP+ DP G FF FDRDWW FR V+ F+R+G LP + +L QLYREA FW L S+Q A+
Sbjct: 61 DKIEERKKALTIIQRPDWLPESLKPTAEAHVLINVGGLMFESPVSIL-KRDEKSLLAQLCSPNPPVLPDPDGGFFYFDRDWWLFRYVMAFMRDGT--LPEDRTLLSQLYREAVFWNLSSMQRAI 181
BLAST of mRNA_S-firma_F_contig10963.1278.1 vs. uniprot
Match: K3W596_GLOUD (BTB domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3W596_GLOUD) HSP 1 Score: 93.2 bits (230), Expect = 2.410e-20 Identity = 53/115 (46.09%), Postives = 69/115 (60.00%), Query Frame = 1
Query: 7 FEDSLQSRWKQDTV---TDKPRLKLNIGGQEFEVASATLGNADAGSLLAALASPRPPMDSDPSGAFFFDRDWWQFRLVLQFLREGDACLPAAKAVLKQLYREAAFWRLPSLQDAV 342
FE SL S W +V R+ +N+GGQ FE++SA L + D GSLLAA + P+ G F DRDWW FR VL FLR+G LP +L++LY E+ FWRL SL+ A+
Sbjct: 43 FEASLTSDWFCSSVFPLVHDRRITINVGGQLFELSSA-LASRDLGSLLAAFVDDQSPLSVLECGCFRIDRDWWLFRYVLSFLRDG--ILPQDPKLLRELYLESEFWRLGSLRKAI 154
BLAST of mRNA_S-firma_F_contig10963.1278.1 vs. uniprot
Match: A0A6G0XCW4_9STRA (BTB domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XCW4_9STRA) HSP 1 Score: 93.2 bits (230), Expect = 2.470e-20 Identity = 53/114 (46.49%), Postives = 69/114 (60.53%), Query Frame = 1
Query: 7 FEDSLQSRW--KQDTVTDKPRLKLNIGGQEFEVASATLGNADAGSLLAALASPRPPMDSDPSGAFFFDRDWWQFRLVLQFLREGDACLPAAKAVLKQLYREAAFWRLPSLQDAV 342
F+ SL S W +D T K RL+L +GGQ+FEV S T+ D SLLAAL + P+ + G F DRDW FRL+L FLR+G LP +L+ LY EA FW+ SL+ A+
Sbjct: 59 FQASLASDWFCHEDKATTKERLRLQVGGQDFEV-SITIARKDPKSLLAALVASDSPLTASDLGCFCIDRDWNLFRLILNFLRDG--ILPNDPKLLRDLYIEADFWKFESLKLAI 169
BLAST of mRNA_S-firma_F_contig10963.1278.1 vs. uniprot
Match: W4FIW1_9STRA (BTB domain-containing protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FIW1_9STRA) HSP 1 Score: 89.7 bits (221), Expect = 1.470e-19 Identity = 51/114 (44.74%), Postives = 68/114 (59.65%), Query Frame = 1
Query: 7 FEDSLQSRW--KQDTVTDKPRLKLNIGGQEFEVASATLGNADAGSLLAALASPRPPMDSDPSGAFFFDRDWWQFRLVLQFLREGDACLPAAKAVLKQLYREAAFWRLPSLQDAV 342
FE SL S W +D T K RL++ +GGQEFEV + + D SLLAAL +P P+ G F DRDW FRL+L FLR+G LP +L+ LY E+ +W+ SL+ A+
Sbjct: 61 FEASLSSDWFCHEDNSTAKDRLRIQVGGQEFEV-TLHIARKDPKSLLAALVAPDSPLAPSAVGCFCIDRDWNLFRLMLNFLRDG--ILPNDPKLLRDLYVESEYWKFDSLKLAI 171
BLAST of mRNA_S-firma_F_contig10963.1278.1 vs. uniprot
Match: A0A2D4BZS6_PYTIN (BTB_2 domain-containing protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BZS6_PYTIN) HSP 1 Score: 92.0 bits (227), Expect = 2.110e-19 Identity = 55/116 (47.41%), Postives = 71/116 (61.21%), Query Frame = 1
Query: 7 FEDSLQSRW----KQDTVTDKPRLKLNIGGQEFEVASATLGNADAGSLLAALASPRPPMDSDPSGAFFFDRDWWQFRLVLQFLREGDACLPAAKAVLKQLYREAAFWRLPSLQDAV 342
FE SL S W TV D+ RL L++GGQ FE+ SA + DAGSLLAAL + P+ G F DRDWW FR VL FLR+G LP +L++LY E+ FW+L S++ A+
Sbjct: 134 FEASLASDWFCLSAFPTVHDR-RLTLDVGGQLFEI-SAPIALKDAGSLLAALVADDSPLGPLECGCFRVDRDWWLFRYVLHFLRDG--LLPQDPKLLRELYLESEFWKLESMRKAI 245 The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10963.1278.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-firma_F_contig10963.1278.1 >prot_S-firma_F_contig10963.1278.1 ID=prot_S-firma_F_contig10963.1278.1|Name=mRNA_S-firma_F_contig10963.1278.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=115bp RSFEDSLQSRWKQDTVTDKPRLKLNIGGQEFEVASATLGNADAGSLLAALback to top mRNA from alignment at S-firma_F_contig10963:2685..3078+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-firma_F_contig10963.1278.1 ID=mRNA_S-firma_F_contig10963.1278.1|Name=mRNA_S-firma_F_contig10963.1278.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=394bp|location=Sequence derived from alignment at S-firma_F_contig10963:2685..3078+ (Sphaerotrichia firma ET2_F female)back to top Coding sequence (CDS) from alignment at S-firma_F_contig10963:2685..3078+ >mRNA_S-firma_F_contig10963.1278.1 ID=mRNA_S-firma_F_contig10963.1278.1|Name=mRNA_S-firma_F_contig10963.1278.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=690bp|location=Sequence derived from alignment at S-firma_F_contig10963:2685..3078+ (Sphaerotrichia firma ET2_F female)back to top |