mRNA_S-firma_F_contig10950.1262.1 (mRNA) Sphaerotrichia firma ET2_F female
|
Overview
Homology
BLAST of mRNA_S-firma_F_contig10950.1262.1 vs. uniprot
Match: A0A7S1C644_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C644_9STRA) HSP 1 Score: 205 bits (521), Expect = 6.950e-58 Identity = 100/171 (58.48%), Postives = 130/171 (76.02%), Query Frame = 1
Query: 1 DVVTQMELVHRSVGITPQFDTVFPDLSVVEHLNFYARLKGVDRAKHRATVQQIAEKVDLDGDAFTMKASELSGGMRRRLTIAISLLGDPQALVLDEPTTGLDPETRRSVWNVIASERA-SRCIIVTTHSMEEADALSSRCAIMVRGRLRCIGTQLHLKARFGDGYQLAVTL 510
DV TQM+LV+ +G+ PQFD DL VV+HL FY RLKGV R + A VQ+ AE+V LDGD+F A +LSGG RRL+IA +L+GDP+ +VLDEPTTGLDPE+RR VW +I SER+ + ++VTTHSMEEAD L++R I+ G+LRC+G+QL LK RFG GY+L++ L
Sbjct: 862 DVATQMDLVYTQLGVVPQFDAPIEDLDVVDHLFFYGRLKGVPRRRLVAAVQRTAEQVQLDGDSFRTAADQLSGGQLRRLSIASALIGDPRLVVLDEPTTGLDPESRREVWKIIQSERSRGKAVLVTTHSMEEADTLANRIGIIAFGQLRCVGSQLRLKNRFGKGYRLSLAL 1032
BLAST of mRNA_S-firma_F_contig10950.1262.1 vs. uniprot
Match: A0A7S4I531_9EUKA (Hypothetical protein n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4I531_9EUKA) HSP 1 Score: 193 bits (491), Expect = 7.680e-57 Identity = 98/177 (55.37%), Postives = 126/177 (71.19%), Query Frame = 1
Query: 4 VVTQMELVHRSVGITPQFDTVFPDLSVVEHLNFYARLKGVDRAKHRATVQQIAEKVDLDGDAFTMKASELSGGMRRRLTIAISLLGDPQALVLDEPTTGLDPETRRSVWNVIASERASRCIIVTTHSMEEADALSSRCAIMVRGRLRCIGTQLHLKARFGDGYQLAVTLKEDSPHAV 534
++ M+ +HR + + PQFDTV+ L+ E L FYARLKG+ + ++ V+ I EKV L G KA +LSGGMRRRL+I ISL+G+P+ + LDEPTTGLDPETRR +W+V+ + RCII+TTHSMEEAD L SR IM RGRL CIGTQLHLK +FG+GY L V E + +V
Sbjct: 183 ILEDMDKIHRIMSVCPQFDTVWMKLTCQETLLFYARLKGIPSKEEKSHVKSILEKVGL-GQYAKRKAKDLSGGMRRRLSIGISLVGNPKVVFLDEPTTGLDPETRRHLWDVLLEIKKGRCIILTTHSMEEADILCSRIGIMSRGRLMCIGTQLHLKNKFGEGYTLHVNFTERNEQSV 358
BLAST of mRNA_S-firma_F_contig10950.1262.1 vs. uniprot
Match: A0A7S1G4D4_9STRA (Hypothetical protein n=2 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1G4D4_9STRA) HSP 1 Score: 187 bits (475), Expect = 1.370e-55 Identity = 84/169 (49.70%), Postives = 122/169 (72.19%), Query Frame = 1
Query: 1 DVVTQMELVHRSVGITPQFDTVFPDLSVVEHLNFYARLKGVDRAKHRATVQQIAEKVDLDGDAFTMKASELSGGMRRRLTIAISLLGDPQALVLDEPTTGLDPETRRSVWNVIASERASRCIIVTTHSMEEADALSSRCAIMVRGRLRCIGTQLHLKARFGDGYQLAVT 507
D+ T+M VH+ +G+ PQFD P ++V EHL FYAR+KG+ + ++ + LDG A+ LSGGM+RRLT+ +SL+G+P+ L LDEPTTGLDPETRR+VW +I R RC+++TTH+M+EA+ALS R AIM GRL+C+GT LHLK+++G G+++ ++
Sbjct: 74 DIATRMSNVHQIIGVCPQFDVFHPGMTVREHLAFYARIKGLAPEREAEVLEGALHAIGLDGRWADTDAATLSGGMKRRLTLGVSLIGNPRVLFLDEPTTGLDPETRRAVWRLIERARVGRCVVLTTHAMDEAEALSQRIAIMALGRLQCLGTTLHLKSKYGGGFKVDIS 242
BLAST of mRNA_S-firma_F_contig10950.1262.1 vs. uniprot
Match: A0A8J2EE02_9DINO (Hypothetical protein n=1 Tax=Amoebophrya sp. A25 TaxID=1410381 RepID=A0A8J2EE02_9DINO) HSP 1 Score: 185 bits (470), Expect = 2.180e-54 Identity = 96/185 (51.89%), Postives = 123/185 (66.49%), Query Frame = 1
Query: 1 DVVTQMELVHRSVGITPQFDTVFPDLSVVEHLNFYARLK-----------GVDRA-KHRATVQQIAEKVDLDGDAFTMKASELSGGMRRRLTIAISLLGDPQALVLDEPTTGLDPETRRSVWNVIASERASRCIIVTTHSMEEADALSSRCAIMVRGRLRCIGTQLHLKARFGDGYQLAVTLKED 519
DV + H +G+ PQFD V+ D++V EHL YAR+K G R+ H V+ +AE+V L+GDA ASELSGGMRRRL+IAI+L+ +P L+LDEPTTGLDP+TR +W VIA SR +I+TTHSMEEADAL R IM GRL+C+GT LHLK +FG G+ L + L +D
Sbjct: 78 DVSRDLAKSHAFLGVCPQFDCVWDDMTVREHLILYARIKRGATSRLGTTGGAFRSYDHEVLVRSVAERVGLEGDALRKLASELSGGMRRRLSIAIALVANPAVLILDEPTTGLDPDTRAGLWRVIAEATKSRAVILTTHSMEEADALCDRIGIMCSGRLKCLGTPLHLKNKFGTGFILTIALTDD 262
BLAST of mRNA_S-firma_F_contig10950.1262.1 vs. uniprot
Match: A0A8J2FIA1_9DINO (Hypothetical protein n=1 Tax=Amoebophrya sp. A120 TaxID=2202890 RepID=A0A8J2FIA1_9DINO) HSP 1 Score: 187 bits (474), Expect = 2.780e-53 Identity = 88/150 (58.67%), Postives = 114/150 (76.00%), Query Frame = 1
Query: 37 VGITPQFDTVFPDLSVVEHLNFYARLKGVDRAKHRATVQQIAEKVDLDGDAFTMKASELSGGMRRRLTIAISLLGDPQALVLDEPTTGLDPETRRSVWNVIASERASRCIIVTTHSMEEADALSSRCAIMVRGRLRCIGTQLHLKARFGD 486
+G+ PQFD V+ DL+V EHL YAR+KG+ K + V+ +AE V L+GDAF ASELSGGMRRRL++AISL+ +P L+LDEPTTGLDP+TR +W VIA+E R +++TTHSMEEADAL R IM G+L+C+GT LHLK +FG+
Sbjct: 380 LGVCPQFDCVWNDLTVEEHLALYARIKGISGYKQKVLVRNVAESVALEGDAFRKLASELSGGMRRRLSLAISLVTNPAVLILDEPTTGLDPDTRAGLWQVIANESKKRAVVLTTHSMEEADALCERIGIMCSGKLKCVGTPLHLKNKFGN 529
BLAST of mRNA_S-firma_F_contig10950.1262.1 vs. uniprot
Match: A0A7S1VKV0_9STRA (Hypothetical protein n=2 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1VKV0_9STRA) HSP 1 Score: 179 bits (453), Expect = 4.740e-53 Identity = 87/171 (50.88%), Postives = 117/171 (68.42%), Query Frame = 1
Query: 1 DVVTQMELVHRSVGITPQFDTVFPDLSVVEHLNFYARLKGVDRAKHRATVQQIAEKVDLDGD-AFTMKASELSGGMRRRLTIAISLLGDPQALVLDEPTTGLDPETRRSVWNVIASERASRCIIVTTHSMEEADALSSRCAIMVRGRLRCIGTQLHLKARFGDGYQLAVTL 510
D V + + +GI PQFD +PDL+V EHL YA +KGV + K R IA KV L D F +A LSGGMRRRL+IA++LL +P+ L LDEPTTGLDP+ +R +WN+I + R RCII+TTH+M+EA+AL +R IM +G ++CIGTQ L+ R+G Y+L T+
Sbjct: 7 DAVEERSDALKELGIVPQFDVYYPDLTVGEHLMMYAAMKGVVQRKQREWAADIATKVGLGSDDVFNRRAGALSGGMRRRLSIAVALLSNPRVLFLDEPTTGLDPDMKRGIWNIIENMRQDRCIILTTHAMDEAEALCNRIGIMAKGTMKCIGTQSDLRDRYGSTYELTFTV 177
BLAST of mRNA_S-firma_F_contig10950.1262.1 vs. uniprot
Match: D2VFK5_NAEGR (Predicted protein (Fragment) n=1 Tax=Naegleria gruberi TaxID=5762 RepID=D2VFK5_NAEGR) HSP 1 Score: 182 bits (462), Expect = 2.980e-51 Identity = 87/183 (47.54%), Postives = 126/183 (68.85%), Query Frame = 1
Query: 1 DVVTQMELVHRSVGITPQFDTVFPDLSVVEHLNFYARLKGVDRAKHRATVQQIAEKVDLDGDAFTMK----ASELSGGMRRRLTIAISLLGDPQALVLDEPTTGLDPETRRSVWNVIASERASRCIIVTTHSMEEADALSSRCAIMVRGRLRCIGTQLHLKARFGDGYQLAVTLKEDSPHAVD 537
D+ ME +H+ +G+T QFD ++PDL+ EHL FY+RLKG+ + VQ + +V LD D K +S LSGGM+RRL+IAISL+GDP ++LDEPTTGLDP ++R +W++I +++ +R II+TTHSMEEAD L R IM +G +C+G+ + LK++FGDG+ L V+ S A +
Sbjct: 337 DIRYDMESIHKMMGLTAQFDILYPDLTCEEHLLFYSRLKGIQLKHEKEHVQSLLRQVGLDNDTLKTKWSPNSSSLSGGMKRRLSIAISLVGDPNVILLDEPTTGLDPLSKRHLWDIILAQKKNRTIILTTHSMEEADVLCDRITIMNKGSFKCLGSGVRLKSKFGDGFLLTVSYGVSSQEAAE 519
BLAST of mRNA_S-firma_F_contig10950.1262.1 vs. uniprot
Match: A0A7S2RDD5_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RDD5_9STRA) HSP 1 Score: 184 bits (467), Expect = 8.070e-51 Identity = 87/159 (54.72%), Postives = 124/159 (77.99%), Query Frame = 1
Query: 37 VGITPQFDTVFPDLSVVEHLNFYARLKGVDRAKHRATVQQIAEKVDLDGDAFTMKASELSGGMRRRLTIAISLLGDPQALVLDEPTTGLDPETRRSVWNVIASERA-SRCIIVTTHSMEEADALSSRCAIMVRGRLRCIGTQLHLKARFGDGYQLAVTL 510
+G+ PQFD +P+L+V EHL +ARLKG+ A+ RA V A KV+LDGDAF +++ +LSGGMRRRL+IA +L+G+P+ ++LDEPTTGLDP+TRR +W +I E++ +R I++TTHSMEEAD L +R IM GRLR +G+Q LK+R+G G++L +T+
Sbjct: 629 LGVCPQFDVHWPELTVAEHLYLFARLKGIPSAQLRAAVTLAATKVNLDGDAFGLRSVQLSGGMRRRLSIAAALVGNPKIIILDEPTTGLDPDTRRQLWGIIEREKSPNRLILITTHSMEEADTLCTRIGIMAGGRLRVLGSQQQLKSRYGSGFKLDLTV 787
BLAST of mRNA_S-firma_F_contig10950.1262.1 vs. uniprot
Match: D3BE51_POLPP (ABC transporter A family protein n=1 Tax=Polysphondylium pallidum (strain ATCC 26659 / Pp 5 / PN500) TaxID=670386 RepID=D3BE51_POLPP) HSP 1 Score: 184 bits (466), Expect = 9.480e-51 Identity = 88/170 (51.76%), Postives = 124/170 (72.94%), Query Frame = 1
Query: 1 DVVTQMELVHRSVGITPQFDTVFPDLSVVEHLNFYARLKGVDRAKHRATVQQIAEKVDLDGDAFTMKASELSGGMRRRLTIAISLLGDPQALVLDEPTTGLDPETRRSVWNVIASERASRCIIVTTHSMEEADALSSRCAIMVRGRLRCIGTQLHLKARFGDGYQLAVTL 510
D+ T+M+ +HR VG+ PQFDT++ DLS VE L FYARLKGV+R++ V+ I V L D ELSGGM+RRL++A+S+ G + + LDEP+TGLDP+TRR +W+++ + RCII+TTHSMEEAD LS+R I+ +G+L+CIG Q HLK++FG+GY L + +
Sbjct: 587 DIATEMDSIHRVVGVCPQFDTLWEDLSCVETLLFYARLKGVERSQELKHVEDILRDVMLY-DVRERLVKELSGGMKRRLSVAVSITGHSKIVFLDEPSTGLDPKTRRELWSILNRLKQGRCIILTTHSMEEADVLSTRIGIISQGKLQCIGPQQHLKSKFGEGYSLKINI 755
BLAST of mRNA_S-firma_F_contig10950.1262.1 vs. uniprot
Match: A0A3P3YGE7_PLABS (Uncharacterized protein n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A3P3YGE7_PLABS) HSP 1 Score: 184 bits (468), Expect = 1.080e-50 Identity = 90/166 (54.22%), Postives = 119/166 (71.69%), Query Frame = 1
Query: 31 RSVGITPQFDTVFPDLSVVEHLNFYARLKGVDRAKHRATVQQIAEKVDLDGDAFTMKASELSGGMRRRLTIAISLLGDPQALVLDEPTTGLDPETRRSVWNVIASERAS-RCIIVTTHSMEEADALSSRCAIMVRGRLRCIGTQLHLKARFGDGYQLAVTLKEDSP 525
RS+G PQFD V+P L+V E L FYAR++ ++ VQ+ AE V+LDGD F +S LSGG RRRL+IAI+L+G P+ ++LDEPTTGLDP+TR +W +I ++A RC+I+TTHSMEEAD L +R AI+ GRLRC+G+Q LK RFG GY + V + SP
Sbjct: 1630 RSLGCCPQFDVVWPTLTVRETLAFYARMRSCPSSQIVGWVQRAAENVELDGDPFDTISSSLSGGQRRRLSIAIALIGSPKVVLLDEPTTGLDPDTRLHIWKIIGQQKAQGRCVIITTHSMEEADNLCTRVAIIAAGRLRCVGSQARLKKRFGHGYTITVRMDVSSP 1795 The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10950.1262.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-firma_F_contig10950.1262.1 >prot_S-firma_F_contig10950.1262.1 ID=prot_S-firma_F_contig10950.1262.1|Name=mRNA_S-firma_F_contig10950.1262.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=176bp MELVHRSVGITPQFDTVFPDLSVVEHLNFYARLKGVDRAKHRATVQQIAEback to top mRNA from alignment at S-firma_F_contig10950:2002..2728- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-firma_F_contig10950.1262.1 ID=mRNA_S-firma_F_contig10950.1262.1|Name=mRNA_S-firma_F_contig10950.1262.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=727bp|location=Sequence derived from alignment at S-firma_F_contig10950:2002..2728- (Sphaerotrichia firma ET2_F female)back to top Coding sequence (CDS) from alignment at S-firma_F_contig10950:2002..2728- >mRNA_S-firma_F_contig10950.1262.1 ID=mRNA_S-firma_F_contig10950.1262.1|Name=mRNA_S-firma_F_contig10950.1262.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=1056bp|location=Sequence derived from alignment at S-firma_F_contig10950:2002..2728- (Sphaerotrichia firma ET2_F female)back to top |