mRNA_S-firma_F_contig10940.1248.1 (mRNA) Sphaerotrichia firma ET2_F female
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Overview
Homology
BLAST of mRNA_S-firma_F_contig10940.1248.1 vs. uniprot
Match: A0A6V1NCR2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1NCR2_HETAK) HSP 1 Score: 122 bits (305), Expect = 3.250e-30 Identity = 78/216 (36.11%), Postives = 111/216 (51.39%), Query Frame = 1
Query: 13 LLHGNRSAAYFQIGDFDAAVKDAEVAVTLEPSWTKGYLRLGQALAELRPLDAI-PVFKAAYERDPSKGVHGMLVAAITKAAKLDATT-----PVESVATWEGVFDR-QEARLRLCSLAHFWNLCKPAERLRIVGEFVATLG----THVPGTIDFTEAKMVPLPMENYEGVDMPALWLEFYERLSSDERVSVFHKAWQAARPAEKDLIMADLKHFFF 627
L GNRSAA +G + A+ DA A+ ++ S+ KGY R AL + L+ + ++AA++ D S K AK + TT PV ++ W +F ++ R R+ LA FWN PAER I F+A + T +FTE KMV LPM+NYE + W++FY S ++ VF K W A EK++I+ DLKHFF
Sbjct: 44 LSFGNRSAARLSLGKNEEALADALEALRIDSSYMKGYHRQACALKAMGNLEGVYEAYRAAFQTDSSNDWAKTQY----KQAKKEYTTFLREEPVSTIEQWVKLFGMLEDPRERMMQLALFWNASSPAERQSIFHRFLAIISGAAMTDAVAKEEFTEDKMVELPMDNYEDMQKTDAWVDFYTSQDSAAKLDVFEKTWDATTDQEKNIIINDLKHFFL 255
BLAST of mRNA_S-firma_F_contig10940.1248.1 vs. uniprot
Match: A0A024TMF1_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TMF1_9STRA) HSP 1 Score: 111 bits (277), Expect = 3.790e-26 Identity = 72/215 (33.49%), Postives = 108/215 (50.23%), Query Frame = 1
Query: 1 PLPQLLHGNRSAAYFQIGDFDAAVKDAEVAVTLEPSWTKGYLRLGQALAELRPLD-AIPVFKAAYERDPSKGVHGMLVAAITKAA-KLDATTPVESVATWEGVFDR-QEARLRLCSLAHFWNLCKPAERLRIVGEFVATLGTH-VPGTID-FTEAKMVPLPMENYEGVDMPALWLEFYERLSSDERVSVFHKAWQAARPAEKDLIMADLKHFFFE 630
P L+GNRSAA F + A+KDAE AV+L+P+W KG+ R GQA L L A +++ + +K VAA KAA K D + S W ++ + +LRL L FWN AER F+A L P I ++ +M P P NY+ +++P W +Y+ L+ ++ + + AA AEK I+ D+K+F +
Sbjct: 36 PKQHTLYGNRSAARFHQKKYQEALKDAETAVSLDPTWAKGHFRKGQAHEALHQLRLAQHAYESTLQHGGNKRDVVEKVAATKKAADKEDRERVIHSREDWNEIYTNISDKKLRLAILVKFWNASTKAERFSFFMRFLAILSDGGTPSRIGRYSTEQMEPFPASNYDTIELPDTWSTYYDSLALAQKGDIMQDMYTAASEAEKTTIINDMKYFIHQ 250
BLAST of mRNA_S-firma_F_contig10940.1248.1 vs. uniprot
Match: A0A812X191_9DINO (Sti1 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812X191_9DINO) HSP 1 Score: 106 bits (265), Expect = 1.300e-23 Identity = 77/246 (31.30%), Postives = 112/246 (45.53%), Query Frame = 1
Query: 1 PLPQLLHGNRSAAYFQIGDFDAAVKDAEVAVTLEPSWTKGYLRLGQAL-AELRPLDAIPVFKAAYERDPSKGVHGMLVAAIT-KAAKLDATTPVESVATWEGVF-DRQEARLRLCSLAHFWNLCKPAERLRIVGEFVATLG-------------------------THVP-GTIDFTEAKMVPLPMENYEGVDMPALWLEFYERLSSDERVSVFHKAWQAARPAEKDLIMADLKHFFFEGKAGDEG 651
P LL GNRSA + Q+GDF AA+ DA+ A +P W K ++R AL + + +A AA DP+ +A++ KA P ++ + +F + RLRL +LA FWN P+ R I + + L T VP + M PLPM NY V +P W+ F+ L + +++++F AW PAE+ LI+ D K FF G AG G
Sbjct: 46 PACHLLLGNRSAVHAQLGDFAAALADADAAAAAKPDWPKAHVRRALALQGQGQWREAERALVAAQALDPTSAYIAQQLASVRGKAVAATLQAPCATLHDFRTLFASLTDVRLRLATLATFWNTASPSTRHAIFAQLLGLLAGGQDGASXXXXXXXXXXXXXDGAPATSVPLDASAVPHSAMRPLPMHNYADVSVPEQWVAFFTDLEAAQQLALFEAAWGLTSPAEQTLIVNDFKFFF--GSAGSAG 289
BLAST of mRNA_S-firma_F_contig10940.1248.1 vs. uniprot
Match: A0A6G0WMA4_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WMA4_9STRA) HSP 1 Score: 103 bits (257), Expect = 2.970e-23 Identity = 69/210 (32.86%), Postives = 104/210 (49.52%), Query Frame = 1
Query: 16 LHGNRSAAYFQIGDFDAAVKDAEVAVTLEPSWTKGYLRLGQALAEL-RPLDAIPVFKAAYERDPSKGVHGMLVAAITKAA-KLDATTPVESVATWEGVFDR-QEARLRLCSLAHFWNLCKPAERLRIVGEFVATLGT-HVPGTID-FTEAKMVPLPMENYEGVDMPALWLEFYERLSSDERVSVFHKAWQAARPAEKDLIMADLKHFFFE 630
L+GNRSA+ FQ FD A++DA A++++P+W KGY R GQAL L R +A F+ A + K VA K A ++D V S W+ ++ + +LRL L FWN ER F+ L P I + M P+P NY+ + +P W ++E LS + + ++AA AEK I+ D+K + +
Sbjct: 36 LYGNRSASRFQQKKFDEALQDANTAISIDPTWAKGYFRKGQALEALSRFREAQRAFELAVKHGGKKRDVLEKVATTKKQANRVDRERVVHSREEWKEIYANISDPKLRLALLVKFWNASTKPERFSFFMRFLVLLSNGSTPNRISRYATDDMEPIPASNYDPIVVPDSWATYFEELSLAGKGDMMQDMYEAAFEAEKTTIINDMKFYVHQ 245
BLAST of mRNA_S-firma_F_contig10940.1248.1 vs. uniprot
Match: A0A7S2SEB7_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2SEB7_9STRA) HSP 1 Score: 85.9 bits (211), Expect = 1.590e-16 Identity = 62/213 (29.11%), Postives = 104/213 (48.83%), Query Frame = 1
Query: 16 LHGNRSAAYFQIGDFDAAVKDAEVAVTLEPSWTKGYLRLGQA-LAELRPLDAIPVFKAAYERDPSKGVHGMLVAAITK-------AAKLDATTPVESVATWEGVFDRQEA-RLRLCSLAHFWNLCKPAERLRIVGEFVATL-GTHVPGTIDFTEAKMVPLPMENYEGVDMPALWLEFYERLSSDERVSVFHKAWQAARPAEKDLIMADLKHFF 624
L GNRS + G F A++DA++++ + + KG+ R A +A + A + A E + H V K AK D + VES+ ++ +F + R+RL ++A FWN +RL I F+ L G P ++ A LPM+NY+ V +P W +F+ L ++V +F++ + E+++I+ DLK FF
Sbjct: 53 LLGNRSLVRLKQGKFQEALEDAQLSIGRDVDYVKGHDRKAAAFIAMNKKWQARRTYAFALEHFKNVKNHQASVFMSRKYKELCGLCAKDDFISVVESMEHFDEIFKHMKLERMRLATMATFWNASSNQDRLAIFAAFIQVLTGESKPIQVESLSA----LPMDNYKDVVIPQTWTDFFNSLDQGDKVKMFYQIYGHCTDIERNMIIRDLKEFF 261
BLAST of mRNA_S-firma_F_contig10940.1248.1 vs. uniprot
Match: A0A024U3X0_9STRA (Prefoldin, alpha subunit n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U3X0_9STRA) HSP 1 Score: 67.0 bits (162), Expect = 2.480e-9 Identity = 35/70 (50.00%), Postives = 45/70 (64.29%), Query Frame = 1
Query: 1 PLPQLLHGNRSAAYFQIGDFDAAVKDAEVAVTLEPSWTKGYLRLGQALAELRPLD-AIPVFKAAYERDPS 207
P+ L GNRSAA+FQ+ ++ A +DAE A L+PSW KGY RLGQALA L D A ++ A + PS
Sbjct: 274 PMAHTLFGNRSAAHFQLRQYEQAQQDAETATALDPSWAKGYFRLGQALAALGHNDRAADAYEEASKLKPS 343
BLAST of mRNA_S-firma_F_contig10940.1248.1 vs. uniprot
Match: A0A3R7A7L0_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A3R7A7L0_9STRA) HSP 1 Score: 65.5 bits (158), Expect = 9.470e-9 Identity = 35/70 (50.00%), Postives = 44/70 (62.86%), Query Frame = 1
Query: 1 PLPQLLHGNRSAAYFQIGDFDAAVKDAEVAVTLEPSWTKGYLRLGQALAELRPLD-AIPVFKAAYERDPS 207
P+ L GNRSAA+FQ+ + A +DAE A L+PSW KGY RLGQALA L D A ++ A + PS
Sbjct: 383 PMAHTLFGNRSAAHFQLRQYAQAQQDAETATALDPSWAKGYFRLGQALAALGHNDRAADAYEEASKLKPS 452
BLAST of mRNA_S-firma_F_contig10940.1248.1 vs. uniprot
Match: UPI001183F5E7 (Uncharacterized protein n=2 Tax=Manduca sexta TaxID=7130 RepID=UPI001183F5E7) HSP 1 Score: 63.2 bits (152), Expect = 5.740e-8 Identity = 33/70 (47.14%), Postives = 46/70 (65.71%), Query Frame = 1
Query: 1 PLPQLLHGNRSAAYFQIGDFDAAVKDAEVAVTLEPSWTKGYLRLGQALAEL-RPLDAIPVFKAAYERDPS 207
P +L NRSAAY + G++ AA+KDAE V + P+W+KGY R+G ALA L R +AI ++ E +PS
Sbjct: 35 PNNHVLFSNRSAAYAKSGNYTAALKDAEQTVAINPTWSKGYSRMGSALAFLGRREEAIAAYEKGLELEPS 104
BLAST of mRNA_S-firma_F_contig10940.1248.1 vs. uniprot
Match: A0A7S3QRU5_DUNTE (Hypothetical protein (Fragment) n=1 Tax=Dunaliella tertiolecta TaxID=3047 RepID=A0A7S3QRU5_DUNTE) HSP 1 Score: 59.3 bits (142), Expect = 8.560e-7 Identity = 33/78 (42.31%), Postives = 47/78 (60.26%), Query Frame = 1
Query: 1 PLPQLLHGNRSAAYFQIGDFDAAVKDAEVAVTLEPSWTKGYLRLGQAL-AELRPLDAIPVFKAAYERDPSKGVHGMLV 231
P +L NRSAA Q+ + + AVKDA+ A+ L PSW KGY R G AL A + ++A+ +++A ER+ G LV
Sbjct: 61 PHNAVLFSNRSAAALQLAELEDAVKDADKAIELNPSWDKGYYRKGCALEAAGKDMEALAAYRSALERNNENGELHRLV 138
BLAST of mRNA_S-firma_F_contig10940.1248.1 vs. uniprot
Match: A0A7S0CXP3_9EUKA (Hypothetical protein n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0CXP3_9EUKA) HSP 1 Score: 59.7 bits (143), Expect = 8.770e-7 Identity = 34/107 (31.78%), Postives = 53/107 (49.53%), Query Frame = 1
Query: 16 LHGNRSAAYFQIGDFDAAVKDAEVAVTLEPSWTKGYLRLGQALAELRPL-DAIPVFKAAYERDPSKGVHGMLVAAITKAAKLDATTPVESVATWEGVFDRQEARLRL 333
L+ NRS AY + GD D AV+DAE ++++PSW+KGY+R G AL L +A F+ ++ P L A + + E + +FD +L +
Sbjct: 65 LYSNRSVAYLKTGDIDKAVEDAEKCISIDPSWSKGYVRKGNALLGKDALREAKATFEEGLKQSPDANTKKQLDAGLRQVTAQSQRLQNELGGMFSKMFDNMWTKLAM 171 The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10940.1248.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-firma_F_contig10940.1248.1 >prot_S-firma_F_contig10940.1248.1 ID=prot_S-firma_F_contig10940.1248.1|Name=mRNA_S-firma_F_contig10940.1248.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=228bp PLPQLLHGNRSAAYFQIGDFDAAVKDAEVAVTLEPSWTKGYLRLGQALAEback to top mRNA from alignment at S-firma_F_contig10940:343..1085+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-firma_F_contig10940.1248.1 ID=mRNA_S-firma_F_contig10940.1248.1|Name=mRNA_S-firma_F_contig10940.1248.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=743bp|location=Sequence derived from alignment at S-firma_F_contig10940:343..1085+ (Sphaerotrichia firma ET2_F female)back to top Coding sequence (CDS) from alignment at S-firma_F_contig10940:343..1085+ >mRNA_S-firma_F_contig10940.1248.1 ID=mRNA_S-firma_F_contig10940.1248.1|Name=mRNA_S-firma_F_contig10940.1248.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=1368bp|location=Sequence derived from alignment at S-firma_F_contig10940:343..1085+ (Sphaerotrichia firma ET2_F female)back to top |