mRNA_S-firma_F_contig1094.1247.1 (mRNA) Sphaerotrichia firma ET2_F female
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Overview
Homology
BLAST of mRNA_S-firma_F_contig1094.1247.1 vs. uniprot
Match: D8LN69_ECTSI (Putative gamma-glutamylcyclotransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LN69_ECTSI) HSP 1 Score: 183 bits (465), Expect = 1.130e-55 Identity = 87/103 (84.47%), Postives = 98/103 (95.15%), Query Frame = 1
Query: 286 STPLFVYGTLMNDKVLFALLDRVPSTKRACLSGYHRYRIKDHVFPAIRPRDGGTVEGLLMTGLDAREKLIFDLFEDDDYHKVDVEVKVEAREDDKRTATCYVW 594
TPLFVYGTLMN+KVLFALL+RVPST++A LSGYHR+RIKDHVFPAIRPR+GG+VEGLLMTGLDAREKLIFDLFED+DYHKVDV+VKVEA +D +TATCYVW
Sbjct: 26 DTPLFVYGTLMNEKVLFALLERVPSTRKASLSGYHRFRIKDHVFPAIRPREGGSVEGLLMTGLDAREKLIFDLFEDEDYHKVDVQVKVEACKDATQTATCYVW 128
BLAST of mRNA_S-firma_F_contig1094.1247.1 vs. uniprot
Match: A0A836CNX4_9STRA (Putative gamma-glutamylcyclotransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNX4_9STRA) HSP 1 Score: 97.8 bits (242), Expect = 4.230e-22 Identity = 52/102 (50.98%), Postives = 69/102 (67.65%), Query Frame = 1
Query: 295 LFVYGTLMNDKVLFALLDRVPSTKRACLSGYHRYRIKDHVFPAIRPRDGGTVEGLLMTGLDAREKLIFDLFEDDDYHKVDVEVKVEAREDDKRTATC--YVW 594
+FVYGTLM +V+ LL +PS+++A L G+HRYRIKD V+PAIRP++ G+V G++ + RE+ IFDLFED DY K V V +E D TC YVW
Sbjct: 13 VFVYGTLMESRVVTTLLGHMPSSEKAVLPGFHRYRIKDRVYPAIRPKEDGSVSGIVFD-VTEREERIFDLFEDSDYDKETVTVTLE----DGSAVTCSAYVW 109
BLAST of mRNA_S-firma_F_contig1094.1247.1 vs. uniprot
Match: A0A2K3MF52_TRIPR (Putative gamma-glutamylcyclotransferase n=1 Tax=Trifolium pratense TaxID=57577 RepID=A0A2K3MF52_TRIPR) HSP 1 Score: 80.5 bits (197), Expect = 6.100e-16 Identity = 44/100 (44.00%), Postives = 63/100 (63.00%), Query Frame = 1
Query: 295 LFVYGTLMNDKVLFALLDRVPSTKRACLSGYHRYRIKDHVFPAIRPRDGGTVEGLLMTGLDAREKLIFDLFEDDDYHKVDVEVKVEAREDDKRTATCYVW 594
+FVYG+L+ D+V+ ALL+RVPS+ A LS YHR++IK V+PAI P V G ++ G+ E I D FED +Y + +V+V ++ R A YVW
Sbjct: 20 VFVYGSLLADEVVRALLNRVPSSSSATLSDYHRFKIKGRVYPAILPVQSKKVTGRVLLGISGVELHILDEFEDVEYTRTEVDVFFTENSENLR-AYAYVW 118
BLAST of mRNA_S-firma_F_contig1094.1247.1 vs. uniprot
Match: UPI001E69435A (AIG2-like protein D n=1 Tax=Trifolium pratense TaxID=57577 RepID=UPI001E69435A) HSP 1 Score: 80.5 bits (197), Expect = 1.670e-15 Identity = 44/100 (44.00%), Postives = 63/100 (63.00%), Query Frame = 1
Query: 295 LFVYGTLMNDKVLFALLDRVPSTKRACLSGYHRYRIKDHVFPAIRPRDGGTVEGLLMTGLDAREKLIFDLFEDDDYHKVDVEVKVEAREDDKRTATCYVW 594
+FVYG+L+ D+V+ ALL+RVPS+ A LS YHR++IK V+PAI P V G ++ G+ E I D FED +Y + +V+V ++ R A YVW
Sbjct: 20 VFVYGSLLADEVVRALLNRVPSSSSATLSDYHRFKIKGRVYPAILPVQSKKVTGRVLLGISGVELHILDEFEDVEYTRTEVDVFFTENSENLR-AYAYVW 118
BLAST of mRNA_S-firma_F_contig1094.1247.1 vs. uniprot
Match: I3SSR9_MEDTR (Putative gamma-glutamylcyclotransferase n=2 Tax=Medicago truncatula TaxID=3880 RepID=I3SSR9_MEDTR) HSP 1 Score: 81.3 bits (199), Expect = 1.980e-15 Identity = 46/100 (46.00%), Postives = 62/100 (62.00%), Query Frame = 1
Query: 295 LFVYGTLMNDKVLFALLDRVPSTKRACLSGYHRYRIKDHVFPAIRPRDGGTVEGLLMTGLDAREKLIFDLFEDDDYHKVDVEVKVEAREDDKRTATCYVW 594
+FVYG+L+ D+V+ ALL RVP + A LS YHR++IKD V+PAI P V G ++ G+ E I D FED +Y K DVEV + ++ R YVW
Sbjct: 28 VFVYGSLLADEVVCALLKRVPPSSPATLSDYHRFKIKDRVYPAILPVHTKKVTGRVLLGISGVELDILDEFEDVEYTKTDVEVFLMDNSENLRVY-AYVW 126
BLAST of mRNA_S-firma_F_contig1094.1247.1 vs. uniprot
Match: UPI000CCCF1F1 (AIG2-like protein D isoform X3 n=2 Tax=Populus trichocarpa TaxID=3694 RepID=UPI000CCCF1F1) HSP 1 Score: 79.7 bits (195), Expect = 2.250e-15 Identity = 42/100 (42.00%), Postives = 61/100 (61.00%), Query Frame = 1
Query: 295 LFVYGTLMNDKVLFALLDRVPSTKRACLSGYHRYRIKDHVFPAIRPRDGGTVEGLLMTGLDAREKLIFDLFEDDDYHKVDVEVKVEAREDDKRTATCYVW 594
+FVYG+L+ D V+ ALL R+P + A L+GYHR+ IK V+PAI P + V G ++ G+ E I D +ED +Y +V V+V + +K A YVW
Sbjct: 15 VFVYGSLLADDVVRALLSRIPQSSPAILNGYHRFSIKGRVYPAILPVENKKVSGKVLHGITDPELYILDEYEDVEYERVTVDVSL-MDNSNKTQALAYVW 113
BLAST of mRNA_S-firma_F_contig1094.1247.1 vs. uniprot
Match: A0A6P5ZV88_DURZI (Putative gamma-glutamylcyclotransferase n=1 Tax=Durio zibethinus TaxID=66656 RepID=A0A6P5ZV88_DURZI) HSP 1 Score: 79.7 bits (195), Expect = 2.460e-15 Identity = 43/100 (43.00%), Postives = 59/100 (59.00%), Query Frame = 1
Query: 295 LFVYGTLMNDKVLFALLDRVPSTKRACLSGYHRYRIKDHVFPAIRPRDGGTVEGLLMTGLDAREKLIFDLFEDDDYHKVDVEVKVEAREDDKRTATCYVW 594
+FVYG+L+ D V+ LL+R+P + A L+G+HR+ IK V+PAI P V G ++ G+ E I D FED +Y K VEV + DK A YVW
Sbjct: 11 VFVYGSLLADDVVRVLLNRIPPSSAALLTGFHRFSIKGRVYPAILPVQNDQVIGKVLLGITDTELHILDEFEDVEYQKTQVEVSL-LESSDKLKAHAYVW 109
BLAST of mRNA_S-firma_F_contig1094.1247.1 vs. uniprot
Match: A0A1E5W809_9POAL (Putative gamma-glutamylcyclotransferase n=2 Tax=Paniceae TaxID=147428 RepID=A0A1E5W809_9POAL) HSP 1 Score: 80.1 bits (196), Expect = 2.500e-15 Identity = 40/100 (40.00%), Postives = 60/100 (60.00%), Query Frame = 1
Query: 295 LFVYGTLMNDKVLFALLDRVPSTKRACLSGYHRYRIKDHVFPAIRPRDGGTVEGLLMTGLDAREKLIFDLFEDDDYHKVDVEVKVEAREDDKRTATCYVW 594
+FVYG+LM D+V+ A+L RVP A L YHR+ +K ++PAI P + V G+++ G+ E L+ D FED +Y + VE+ + +K A YVW
Sbjct: 19 VFVYGSLMADEVVRAILKRVPPAAPAILPNYHRFNVKGRIYPAILPVESKKVAGMVVMGITDEELLVLDAFEDVEYTRTRVEISL-TDSSEKMLADTYVW 117
BLAST of mRNA_S-firma_F_contig1094.1247.1 vs. uniprot
Match: U5GCL0_POPTR (Putative gamma-glutamylcyclotransferase n=2 Tax=Populus trichocarpa TaxID=3694 RepID=U5GCL0_POPTR) HSP 1 Score: 79.7 bits (195), Expect = 2.940e-15 Identity = 42/100 (42.00%), Postives = 61/100 (61.00%), Query Frame = 1
Query: 295 LFVYGTLMNDKVLFALLDRVPSTKRACLSGYHRYRIKDHVFPAIRPRDGGTVEGLLMTGLDAREKLIFDLFEDDDYHKVDVEVKVEAREDDKRTATCYVW 594
+FVYG+L+ D V+ ALL R+P + A L+GYHR+ IK V+PAI P + V G ++ G+ E I D +ED +Y +V V+V + +K A YVW
Sbjct: 15 VFVYGSLLADDVVRALLSRIPQSSPAILNGYHRFSIKGRVYPAILPVENKKVSGKVLHGITDPELYILDEYEDVEYERVTVDVSL-MDNSNKTQALAYVW 113
BLAST of mRNA_S-firma_F_contig1094.1247.1 vs. uniprot
Match: UPI001F5C8B64 (AIG2-like protein D n=1 Tax=Lolium rigidum TaxID=89674 RepID=UPI001F5C8B64) HSP 1 Score: 79.7 bits (195), Expect = 3.350e-15 Identity = 39/100 (39.00%), Postives = 63/100 (63.00%), Query Frame = 1
Query: 295 LFVYGTLMNDKVLFALLDRVPSTKRACLSGYHRYRIKDHVFPAIRPRDGGTVEGLLMTGLDAREKLIFDLFEDDDYHKVDVEVKVEAREDDKRTATCYVW 594
+FVYG+LM D+V+ A+L RVP++ A L+ YHR+ +KD ++PAI P + V G ++TG+ E ++ D FED +Y + V++ + + A YVW
Sbjct: 17 VFVYGSLMADEVVSAILHRVPASSPALLNDYHRFSVKDRIYPAILPVESKKVAGRVITGISDAELIVLDAFEDYEYVRRTVQISL-TDTSETMLADTYVW 115 The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig1094.1247.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-firma_F_contig1094.1247.1 >prot_S-firma_F_contig1094.1247.1 ID=prot_S-firma_F_contig1094.1247.1|Name=mRNA_S-firma_F_contig1094.1247.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=199bp MPSRPPIGQVLPLLLLVSLRIGVESFYVSAGNQARQQRHTKPRALSPPGSback to top mRNA from alignment at S-firma_F_contig1094:20179..22576+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-firma_F_contig1094.1247.1 ID=mRNA_S-firma_F_contig1094.1247.1|Name=mRNA_S-firma_F_contig1094.1247.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=2398bp|location=Sequence derived from alignment at S-firma_F_contig1094:20179..22576+ (Sphaerotrichia firma ET2_F female)back to top Coding sequence (CDS) from alignment at S-firma_F_contig1094:20179..22576+ >mRNA_S-firma_F_contig1094.1247.1 ID=mRNA_S-firma_F_contig1094.1247.1|Name=mRNA_S-firma_F_contig1094.1247.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=1194bp|location=Sequence derived from alignment at S-firma_F_contig1094:20179..22576+ (Sphaerotrichia firma ET2_F female)back to top |