mRNA_S-firma_F_contig10931.1237.1 (mRNA) Sphaerotrichia firma ET2_F female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-firma_F_contig10931.1237.1
Unique NamemRNA_S-firma_F_contig10931.1237.1
TypemRNA
OrganismSphaerotrichia firma ET2_F female (Sphaerotrichia firma ET2_F female)
Homology
BLAST of mRNA_S-firma_F_contig10931.1237.1 vs. uniprot
Match: D7FZW5_ECTSI (MCM domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZW5_ECTSI)

HSP 1 Score: 471 bits (1211), Expect = 2.460e-158
Identity = 248/267 (92.88%), Postives = 255/267 (95.51%), Query Frame = 1
Query:    1 DVVTVSGVVKSVNAELASGRVNKRAKASGLYLIYLEANSLVNARQENGPAGTEEGKSADANKGKDSGGGGSSRSKSTTHFTPDELQAILQIAEDDDPFGLVVSSLCPSIFGHEIVKAGLILGLFGGTSRNSEVATRCDPHVLVVGDPGLGKSQMLHAASQASPRSVYVCGNTTSTTGLTVTLSKEGTSGEVGLEAGALVLSDQGTCCIDEFDKMGCDPHALLEAMEQQRISIAKAGVVASLSARCSVLAAANPIGGHYNRGKTIAEN 801
            DVVTVSGVVKSVNAE ASGRVNKRAKASGLYLIYLEANSLVNARQ++G AG EEGKS++  + KDS GG  +RSKST HFTP+ELQ ILQIA DDDPFGLVVSSLCPSIFGHEIVKAGLILGLFGGTSRNSEVATRCDPHVLVVGDPGLGKSQMLHAASQASPRSVYVCGNTTSTTGLTVTLSKEGTSGEVGLEAGALVLSDQGTCCIDEFDKMGCDPHALLEAMEQQRISIAKAGVVASLSARCSVLAAANPIGGHYNRGKTIAEN
Sbjct:  289 DVVTVSGVVKSVNAEFASGRVNKRAKASGLYLIYLEANSLVNARQDDGQAGGEEGKSSNTERSKDSSGG--ARSKSTAHFTPEELQGILQIAHDDDPFGLVVSSLCPSIFGHEIVKAGLILGLFGGTSRNSEVATRCDPHVLVVGDPGLGKSQMLHAASQASPRSVYVCGNTTSTTGLTVTLSKEGTSGEVGLEAGALVLSDQGTCCIDEFDKMGCDPHALLEAMEQQRISIAKAGVVASLSARCSVLAAANPIGGHYNRGKTIAEN 553          
BLAST of mRNA_S-firma_F_contig10931.1237.1 vs. uniprot
Match: A0A6H5L626_9PHAE (MCM domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L626_9PHAE)

HSP 1 Score: 411 bits (1057), Expect = 4.250e-141
Identity = 217/238 (91.18%), Postives = 227/238 (95.38%), Query Frame = 1
Query:    1 DVVTVSGVVKSVNAELASGRVNKRAKASGLYLIYLEANSLVNARQENGPAGTEEGKSADANKGKDSGGGGSSRSKSTTHFTPDELQAILQIAEDDDPFGLVVSSLCPSIFGHEIVKAGLILGLFGGTSRNSEVATRCDPHVLVVGDPGLGKSQMLHAASQASPRSVYVCGNTTSTTGLTVTLSKEGTSGEVGLEAGALVLSDQGTCCIDEFDKMGCDPHALLEAMEQQRISIAKAGVV 714
            DVVTVSGVVKSVNAE ASGRVNKRAKASGLYLIYLEANSLVNARQ++GPAG E+GKS++  + KDS GG  +RSKST HFTP+ELQ ILQIA DDDPFGLVVSSLCPSIFGHEIVKAGLILGLFGGTSRNSEVATRCDPHVLVVGDPGLGKSQMLHAASQASPRSVYVCGNTTSTTGLTVTLSKEGTSGEVGLEAGALVLSDQGTCCIDEFDKMGCDPHALLEAMEQQRISIAKAG++
Sbjct:  175 DVVTVSGVVKSVNAEFASGRVNKRAKASGLYLIYLEANSLVNARQDDGPAG-EDGKSSNTERSKDSSGG--ARSKSTAHFTPEELQGILQIAHDDDPFGLVVSSLCPSIFGHEIVKAGLILGLFGGTSRNSEVATRCDPHVLVVGDPGLGKSQMLHAASQASPRSVYVCGNTTSTTGLTVTLSKEGTSGEVGLEAGALVLSDQGTCCIDEFDKMGCDPHALLEAMEQQRISIAKAGLM 409          
BLAST of mRNA_S-firma_F_contig10931.1237.1 vs. uniprot
Match: A0A836CFT0_9STRA (MCM2/3/5 family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFT0_9STRA)

HSP 1 Score: 294 bits (753), Expect = 3.500e-90
Identity = 173/285 (60.70%), Postives = 197/285 (69.12%), Query Frame = 1
Query:   10 TVSGVVKSVNAELASGRVNKRAKASGLYLIYLEANSLVNARQENGPAGTEEGKSADANKGKDSGGGGSSRS---KSTTHFTPDELQAILQIAE-DDDPFGLVVSSLCPSIFGHEIVKAGLILGLFGGTSRNSEVATRCDPHVLVVGDPGLGKSQMLHAASQASPRSVYVCGNT----TSTTGLTVTLSKEGTSGEVGLEAGALVLSDQGTCC-------------IDEFDKMGCDPHALLEAMEQQRISIAKAGVVASLSARCSVLAAANPIGGHYNRGKTIAEN 801
            TVSG V+SVNAELASGR  K AKASGLYL+YL AN + NAR                      G GG +R    K+   FT ++L  I  +A     PF L+V+SLCP IFGHE+VKAGL+L L G      EV TR D HVLVVGDPGLGKSQML A S A+PRSVYVCGNT    T+ TGLTVTL+K+G  G+VGLE+GALVL+DQG CC             IDEFDKMGCDP ALLEAMEQQRISIAK G+VASLSARCSV+AAANP GGHY+RG+T+AEN
Sbjct:  302 TVSGTVRSVNAELASGRFGKNAKASGLYLLYLRANCVTNAR----------------------GVGGGARDGDDKTIQQFTQEDLDEIRAVASVHPSPFELIVASLCPGIFGHELVKAGLVLALAGDIG--DEVPTRSDAHVLVVGDPGLGKSQMLQAVSAAAPRSVYVCGNTARRVTAATGLTVTLTKDG--GDVGLESGALVLADQGVCCAXXXXXXXXXXXXIDEFDKMGCDPTALLEAMEQQRISIAKGGIVASLSARCSVVAAANPAGGHYSRGRTVAEN 560          
BLAST of mRNA_S-firma_F_contig10931.1237.1 vs. uniprot
Match: L1K206_GUITC (Minichromosome maintenance protein 8 n=2 Tax=Guillardia theta TaxID=55529 RepID=L1K206_GUITC)

HSP 1 Score: 271 bits (694), Expect = 7.480e-84
Identity = 146/271 (53.87%), Postives = 183/271 (67.53%), Query Frame = 1
Query:    1 DVVTVSGVVKSVNAELASGRVNKRAKASGLYLIYLEANSLVNARQENGPAGTEEGKSADANKGKDSGGGGSSRSKSTTHFTPDELQAILQIAEDDDPFGLVVSSLCPSIFGHEIVKAGLILGLFGGTSRNSE----VATRCDPHVLVVGDPGLGKSQMLHAASQASPRSVYVCGNTTSTTGLTVTLSKEGTSGEVGLEAGALVLSDQGTCCIDEFDKMGCDPHALLEAMEQQRISIAKAGVVASLSARCSVLAAANPIGGHYNRGKTIAEN 801
            D + +SG+VK V+ +   G    R K   L+L+Y+EANS+ N+++ +G                            T  FT  +L+A+ +IA D D F L+V+S+CPSI+GHE+VK  L L LFGG  +N E    +A R DPH+L+VG+PGLGKSQML A S  +PR VYVCGNTTST GLTVT+ K+  SG+  LEAGALVL DQG CCIDEFDKMG +  ALLEAMEQQ IS+AKAG+V SLSAR +V+AAANPIGGHYNR KT+ EN
Sbjct:  117 DEIAISGIVKVVSTDGDGGH---RGKNKCLFLLYIEANSISNSKKASGDK------------------------SDTLVFTSKDLKAVKEIANDSDTFKLIVNSICPSIYGHEVVKMALALALFGGCQKNGEEKNKLAVRGDPHILIVGEPGLGKSQMLQAVSVLAPRGVYVCGNTTSTAGLTVTVGKDSGSGDFSLEAGALVLGDQGVCCIDEFDKMGGEQQALLEAMEQQSISVAKAGIVCSLSARSAVIAAANPIGGHYNRAKTVCEN 360          
BLAST of mRNA_S-firma_F_contig10931.1237.1 vs. uniprot
Match: A0A1S3JYB5_LINUN (DNA helicase MCM8 n=1 Tax=Lingula unguis TaxID=7574 RepID=A0A1S3JYB5_LINUN)

HSP 1 Score: 276 bits (707), Expect = 1.160e-83
Identity = 154/271 (56.83%), Postives = 190/271 (70.11%), Query Frame = 1
Query:    1 DVVTVSGVVKSVNAELASGRVNKRAKASGLYLIYLEANSLVNARQENGPAGTEEGKSADANKGKDSGGGGSSRSKSTTHFTPDELQAILQIAEDDDPFGLVVSSLCPSIFGHEIVKAGLILGLFGGTSR----NSEVATRCDPHVLVVGDPGLGKSQMLHAASQASPRSVYVCGNTTSTTGLTVTLSKEGTSGEVGLEAGALVLSDQGTCCIDEFDKMGCDPHALLEAMEQQRISIAKAGVVASLSARCSVLAAANPIGGHYNRGKTIAEN 801
            D+VTVSG+VK  + E   GR   +     ++L+YL ANS+ N++     AG E+G + D                    FT  EL AI +I  +   F L+V SLCPSI+GHE+VKAGL+LGLFGG+ +     + +  R DPH+LVVGDPGLGKSQML A +  +PRSVYVCGNTT+++GLTVTLSKEG SG+  LEAGALVL+DQG CCIDEFDKMG    ALLEAMEQQ ISIAKAG+V SL AR S+LAAANP+GGHYN+GKT++EN
Sbjct:  347 DIVTVSGIVKVTSTEKGRGRNKDKC----MFLLYLHANSVNNSKGPKSGAG-EQGLAID--------------------FTLKELYAIEEIQSEKKLFRLIVGSLCPSIYGHEMVKAGLVLGLFGGSQKYANDKNRIPVRGDPHILVVGDPGLGKSQMLQAVAGVAPRSVYVCGNTTTSSGLTVTLSKEGGSGDYALEAGALVLADQGCCCIDEFDKMGSQHQALLEAMEQQSISIAKAGIVCSLPARTSILAAANPVGGHYNKGKTVSEN 592          
BLAST of mRNA_S-firma_F_contig10931.1237.1 vs. uniprot
Match: A0A024UPV4_9STRA (MCM domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UPV4_9STRA)

HSP 1 Score: 268 bits (684), Expect = 5.540e-83
Identity = 148/268 (55.22%), Postives = 188/268 (70.15%), Query Frame = 1
Query:    4 VVTVSGVVKSVNAELASGRVNKRAKASGLYLIYLEANSLVNARQENGPAGTEEGKSADANKGKDSGGGGSSRSKSTTHFTPDELQAILQIAEDDDPFGLVVSSLCPSIFGHEIVKAGLILGLFGGTSRNSE--VATRCDPHVLVVGDPGLGKSQMLHAASQASPRSVYVCGNTTSTTGLTVTLSKEGTSGEVGLEAGALVLSDQGTCCIDEFDKMGCDPHALLEAMEQQRISIAKAGVVASLSARCSVLAAANPIGGHYNRGKTIAEN 801
            +VT+ G VK+VN+E+ SGR  K+A+AS LY++Y+ ANS+V   Q            A+A           S ++ T  F+  +L AI +IA DD  F  +V S CP I+ +E+VKAGL+L LFGG  +  +  V TR D HVL+VGDPGLGKSQML A S  +PR VYV GNT +TTGLTVT+ K+ +SG+  LEAGALVL+DQG CCIDEFDKM CD  ALLEAMEQQ ISIAKAG+V +L+AR SV+AAANP GGHYNR ++++EN
Sbjct:  257 IVTICGAVKAVNSEVHSGRFGKQAQASSLYVLYIVANSVVTLNQ------------AEA-----------SPTEDTNEFSDQDLDAICKIAHDDHVFDRLVHSFCPGIYRNELVKAGLLLALFGGAQKKEDNAVFTRSDSHVLLVGDPGLGKSQMLRAVSMITPRGVYVGGNTATTTGLTVTMVKD-SSGDYALEAGALVLADQGVCCIDEFDKMACDYQALLEAMEQQSISIAKAGIVCNLNARTSVIAAANPSGGHYNRSRSVSEN 500          
BLAST of mRNA_S-firma_F_contig10931.1237.1 vs. uniprot
Match: A0A7M7PR06_STRPU (MCM domain-containing protein n=2 Tax=Echinacea TaxID=7674 RepID=A0A7M7PR06_STRPU)

HSP 1 Score: 275 bits (702), Expect = 1.250e-82
Identity = 154/272 (56.62%), Postives = 191/272 (70.22%), Query Frame = 1
Query:    1 DVVTVSGVVKSVNAELASGRVNKRAKASGLYLIYLEANSLVNARQENGPAGTEEGKSADANKGKD-SGGGGSSRSKSTTHFTPDELQAILQIAEDDDPFGLVVSSLCPSIFGHEIVKAGLILGLFGGTSR----NSEVATRCDPHVLVVGDPGLGKSQMLHAASQASPRSVYVCGNTTSTTGLTVTLSKEGTSGEVGLEAGALVLSDQGTCCIDEFDKMGCDPHALLEAMEQQRISIAKAGVVASLSARCSVLAAANPIGGHYNRGKTIAEN 801
            D VTVSG+VK  N +   GR   +     ++L+Y+ ANSL N ++              + KG D SGG G+    +   F+  EL AI +I   ++ F L++ SLCP+I+GHE+VKAGLILGL GGT +     + +  R DPH+LVVGDPGLGKSQML AAS  +PR VYVCGNTT+T+GLTVTL+K+G+SG+  LEAGALVL DQG CCIDEFDKMG    ALLEAMEQQ ISIAKAGVV SL AR S+LAAANP+GGHYN+ KT++EN
Sbjct:  380 DTVTVSGIVKVSNVDEGKGRNKDKC----MFLLYIHANSLSNLKK--------------SKKGSDVSGGIGAG---AAVDFSIKELYAIQEIQSQENLFKLIIGSLCPTIYGHELVKAGLILGLLGGTHKYTNDKNRIPVRGDPHILVVGDPGLGKSQMLQAASNVAPRGVYVCGNTTTTSGLTVTLTKDGSSGDYSLEAGALVLGDQGCCCIDEFDKMGSQHQALLEAMEQQSISIAKAGVVCSLPARTSILAAANPVGGHYNKAKTVSEN 630          
BLAST of mRNA_S-firma_F_contig10931.1237.1 vs. uniprot
Match: UPI0014551615 (DNA helicase MCM8-like n=1 Tax=Asterias rubens TaxID=7604 RepID=UPI0014551615)

HSP 1 Score: 274 bits (700), Expect = 1.290e-82
Identity = 156/271 (57.56%), Postives = 187/271 (69.00%), Query Frame = 1
Query:    1 DVVTVSGVVKSVNAELASGRVNKRAKASGLYLIYLEANSLVNARQENGPAGTEEGKSADANKGKDSGGGGSSRSKSTTHFTPDELQAILQIAEDDDPFGLVVSSLCPSIFGHEIVKAGLILGLFGGTSR----NSEVATRCDPHVLVVGDPGLGKSQMLHAASQASPRSVYVCGNTTSTTGLTVTLSKEGTSGEVGLEAGALVLSDQGTCCIDEFDKMGCDPHALLEAMEQQRISIAKAGVVASLSARCSVLAAANPIGGHYNRGKTIAEN 801
            DVVT+ GVVK  N +   GR   +     ++L+YL ANS+ N  Q+ G   +  G+S+ A  G                FT  EL AI +I E  + F L+V S+CP+I+GHE+VKAGLILGL GGT +     + +  R DPH+LVVGDPGLGKSQML A S  +PR VYVCGNTT+T+GLTVTLSKEG SG+  LEAGALVL DQG CCIDEFDKMG    ALLEAMEQQ ISIAKAGVV SL AR S+LAAANP+GGHYN+ KT++EN
Sbjct:  339 DVVTIGGVVKVSNVDEGHGRNKDKC----MFLLYLHANSVQN--QKRGKKASSGGESSPAGTG------------IAMDFTLKELYAIQEIQEQKNLFRLLVGSICPAIYGHEMVKAGLILGLLGGTHKYVNDKNRIPVRGDPHILVVGDPGLGKSQMLQAVSNVAPRGVYVCGNTTTTSGLTVTLSKEGGSGDFALEAGALVLGDQGCCCIDEFDKMGNQHQALLEAMEQQSISIAKAGVVCSLPARTSILAAANPVGGHYNKAKTVSEN 591          
BLAST of mRNA_S-firma_F_contig10931.1237.1 vs. uniprot
Match: W4H1Q8_9STRA (MCM domain-containing protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4H1Q8_9STRA)

HSP 1 Score: 270 bits (691), Expect = 1.740e-82
Identity = 148/268 (55.22%), Postives = 188/268 (70.15%), Query Frame = 1
Query:    4 VVTVSGVVKSVNAELASGRVNKRAKASGLYLIYLEANSLVNARQENGPAGTEEGKSADANKGKDSGGGGSSRSKSTTHFTPDELQAILQIAEDDDPFGLVVSSLCPSIFGHEIVKAGLILGLFGGTSRNSE--VATRCDPHVLVVGDPGLGKSQMLHAASQASPRSVYVCGNTTSTTGLTVTLSKEGTSGEVGLEAGALVLSDQGTCCIDEFDKMGCDPHALLEAMEQQRISIAKAGVVASLSARCSVLAAANPIGGHYNRGKTIAEN 801
            +VT+ G VK+VN+E+ SGR  K+A+AS LY++Y+ ANS+VN  Q            A+ +K            + T  F+P +L AI  IA DD  F  ++ S CP I+ +E+VKAGL+L LFGG  +  +  V TR D HVL+VGDPGLGKSQML A S  +PR VYV GNT +TTGLTVT+ K+ +SG+  LEAGALVL+DQG CCIDEFDKM CD  ALLEAMEQQ ISIAKAG+V +L+AR SV+AAANP GGHYNR ++++EN
Sbjct:  208 IVTICGPVKAVNSEVHSGRFGKQAQASSLYVLYIVANSVVNHNQ------------AETSK------------EDTAEFSPQDLDAIYTIAHDDQVFDRLIHSFCPGIYRNELVKAGLLLALFGGAQKKEDNAVFTRSDSHVLLVGDPGLGKSQMLRAVSMITPRGVYVGGNTATTTGLTVTMVKD-SSGDYALEAGALVLADQGVCCIDEFDKMACDYQALLEAMEQQSISIAKAGIVCNLNARTSVIAAANPSGGHYNRSRSVSEN 450          
BLAST of mRNA_S-firma_F_contig10931.1237.1 vs. uniprot
Match: A0A8B7YXA5_ACAPL (DNA helicase MCM8-like n=2 Tax=Valvatida TaxID=41166 RepID=A0A8B7YXA5_ACAPL)

HSP 1 Score: 273 bits (699), Expect = 1.800e-82
Identity = 156/271 (57.56%), Postives = 186/271 (68.63%), Query Frame = 1
Query:    1 DVVTVSGVVKSVNAELASGRVNKRAKASGLYLIYLEANSLVNARQENGPAGTEEGKSADANKGKDSGGGGSSRSKSTTHFTPDELQAILQIAEDDDPFGLVVSSLCPSIFGHEIVKAGLILGLFGGTSR----NSEVATRCDPHVLVVGDPGLGKSQMLHAASQASPRSVYVCGNTTSTTGLTVTLSKEGTSGEVGLEAGALVLSDQGTCCIDEFDKMGCDPHALLEAMEQQRISIAKAGVVASLSARCSVLAAANPIGGHYNRGKTIAEN 801
            DVVT+ GVVK  N +   GR   +     ++L+YL ANS+ N  Q+ G     + +S+    G                FT  EL AI +I +  + F L+V SLCP+I+GHE+VKAGLILGLFGGT R     + +  R DPH+LVVGDPGLGKSQML A S  +PR VYVCGNTT+T+GLTVTLSKEG SG+  LEAGALVL DQG CCIDEFDKMG    ALLEAMEQQ ISIAKAGVV SL AR S+LAAANP+GGHYN+ KT++EN
Sbjct:  339 DVVTIGGVVKVSNIDEGHGRNKDKC----MFLLYLHANSVQN--QKRGKKAVSDDESSPTGMG------------IAMDFTLKELYAIQEIQDQKNLFRLLVGSLCPAIYGHEMVKAGLILGLFGGTHRFVNDKNRIPVRGDPHILVVGDPGLGKSQMLQATSNVAPRGVYVCGNTTTTSGLTVTLSKEGGSGDYALEAGALVLGDQGCCCIDEFDKMGNQHQALLEAMEQQSISIAKAGVVCSLPARTSILAAANPVGGHYNKAKTVSEN 591          
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10931.1237.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FZW5_ECTSI2.460e-15892.88MCM domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5L626_9PHAE4.250e-14191.18MCM domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A836CFT0_9STRA3.500e-9060.70MCM2/3/5 family-domain-containing protein n=1 Tax=... [more]
L1K206_GUITC7.480e-8453.87Minichromosome maintenance protein 8 n=2 Tax=Guill... [more]
A0A1S3JYB5_LINUN1.160e-8356.83DNA helicase MCM8 n=1 Tax=Lingula unguis TaxID=757... [more]
A0A024UPV4_9STRA5.540e-8355.22MCM domain-containing protein n=1 Tax=Aphanomyces ... [more]
A0A7M7PR06_STRPU1.250e-8256.62MCM domain-containing protein n=2 Tax=Echinacea Ta... [more]
UPI00145516151.290e-8257.56DNA helicase MCM8-like n=1 Tax=Asterias rubens Tax... [more]
W4H1Q8_9STRA1.740e-8255.22MCM domain-containing protein n=1 Tax=Aphanomyces ... [more]
A0A8B7YXA5_ACAPL1.800e-8257.56DNA helicase MCM8-like n=2 Tax=Valvatida TaxID=411... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_F_contig10931contigS-firma_F_contig10931:1559..4944 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef902022-09-19
OGS1.0 of Sphaerotrichia firma ET2_F female2021-02-24
Properties
Property NameValue
Seed ortholog2880.D7FZW5
Preferred nameMCM8
PFAMsMCM,MCM_OB
Max annot lvl2759|Eukaryota
KEGG koko:K10737
GOsGO:0000003,GO:0000082,GO:0000278,GO:0000280,GO:0000724,GO:0000725,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0006139,GO:0006259,GO:0006260,GO:0006281,GO:0006302,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0007049,GO:0007140,GO:0007143,GO:0007275,GO:0007276,GO:0007292,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009555,GO:0009987,GO:0016043,GO:0019953,GO:0022402,GO:0022412,GO:0022414,GO:0031974,GO:0031981,GO:0032501,GO:0032502,GO:0032504,GO:0032991,GO:0033554,GO:0034641,GO:0034645,GO:0042555,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0044703,GO:0044770,GO:0044772,GO:0044843,GO:0046483,GO:0048229,GO:0048232,GO:0048285,GO:0048609,GO:0048856,GO:0050896,GO:0051321,GO:0051704,GO:0051716,GO:0070013,GO:0071704,GO:0071840,GO:0090304,GO:0097362,GO:0140013,GO:1901360,GO:1901576,GO:1903046,GO:1903047
Evalue4.03e-159
EggNOG OGsCOG1241@1|root,KOG0480@2759|Eukaryota
EC3.6.4.12
DescriptionDNA replication initiation
COG categoryL
BRITEko00000,ko01000,ko03032
Hectar predicted targeting categoryother localisation
Exons8
Model size803
Cds size801
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_F_contig10931.1237.1prot_S-firma_F_contig10931.1237.1Sphaerotrichia firma ET2_F femalepolypeptideS-firma_F_contig10931 1559..4944 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815637.5038776-CDS-S-firma_F_contig10931:1558..16931622815637.5038776-CDS-S-firma_F_contig10931:1558..1693Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10931 1559..1693 +
1696949470.6616871-CDS-S-firma_F_contig10931:1558..16931696949470.6616871-CDS-S-firma_F_contig10931:1558..1693Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10931 1559..1693 +
1622815637.5143619-CDS-S-firma_F_contig10931:2066..22011622815637.5143619-CDS-S-firma_F_contig10931:2066..2201Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10931 2067..2201 +
1696949470.6722486-CDS-S-firma_F_contig10931:2066..22011696949470.6722486-CDS-S-firma_F_contig10931:2066..2201Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10931 2067..2201 +
1622815637.5239525-CDS-S-firma_F_contig10931:2650..27281622815637.5239525-CDS-S-firma_F_contig10931:2650..2728Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10931 2651..2728 +
1696949470.68642-CDS-S-firma_F_contig10931:2650..27281696949470.68642-CDS-S-firma_F_contig10931:2650..2728Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10931 2651..2728 +
1622815637.533223-CDS-S-firma_F_contig10931:3184..32951622815637.533223-CDS-S-firma_F_contig10931:3184..3295Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10931 3185..3295 +
1696949470.696514-CDS-S-firma_F_contig10931:3184..32951696949470.696514-CDS-S-firma_F_contig10931:3184..3295Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10931 3185..3295 +
1622815637.5463872-CDS-S-firma_F_contig10931:3492..35701622815637.5463872-CDS-S-firma_F_contig10931:3492..3570Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10931 3493..3570 +
1696949470.7052414-CDS-S-firma_F_contig10931:3492..35701696949470.7052414-CDS-S-firma_F_contig10931:3492..3570Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10931 3493..3570 +
1622815637.5621352-CDS-S-firma_F_contig10931:3859..39311622815637.5621352-CDS-S-firma_F_contig10931:3859..3931Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10931 3860..3931 +
1696949470.7130425-CDS-S-firma_F_contig10931:3859..39311696949470.7130425-CDS-S-firma_F_contig10931:3859..3931Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10931 3860..3931 +
1622815637.5772204-CDS-S-firma_F_contig10931:4232..43291622815637.5772204-CDS-S-firma_F_contig10931:4232..4329Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10931 4233..4329 +
1696949470.720968-CDS-S-firma_F_contig10931:4232..43291696949470.720968-CDS-S-firma_F_contig10931:4232..4329Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10931 4233..4329 +
1622815637.588852-CDS-S-firma_F_contig10931:4849..49441622815637.588852-CDS-S-firma_F_contig10931:4849..4944Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10931 4850..4944 +
1696949470.729687-CDS-S-firma_F_contig10931:4849..49441696949470.729687-CDS-S-firma_F_contig10931:4849..4944Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10931 4850..4944 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-firma_F_contig10931.1237.1

>prot_S-firma_F_contig10931.1237.1 ID=prot_S-firma_F_contig10931.1237.1|Name=mRNA_S-firma_F_contig10931.1237.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=267bp
DVVTVSGVVKSVNAELASGRVNKRAKASGLYLIYLEANSLVNARQENGPA
GTEEGKSADANKGKDSGGGGSSRSKSTTHFTPDELQAILQIAEDDDPFGL
VVSSLCPSIFGHEIVKAGLILGLFGGTSRNSEVATRCDPHVLVVGDPGLG
KSQMLHAASQASPRSVYVCGNTTSTTGLTVTLSKEGTSGEVGLEAGALVL
SDQGTCCIDEFDKMGCDPHALLEAMEQQRISIAKAGVVASLSARCSVLAA
ANPIGGHYNRGKTIAEN
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mRNA from alignment at S-firma_F_contig10931:1559..4944+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-firma_F_contig10931.1237.1 ID=mRNA_S-firma_F_contig10931.1237.1|Name=mRNA_S-firma_F_contig10931.1237.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=3386bp|location=Sequence derived from alignment at S-firma_F_contig10931:1559..4944+ (Sphaerotrichia firma ET2_F female)
GACGTCGTGACGGTTTCTGGGGTGGTTAAGTCCGTCAACGCCGAGCTCGC CTCGGGGAGGGTCAACAAGCGCGCCAAGGCCAGCGGCCTGTACCTCATCT ACCTCGAGGCCAACTCGCTCGTCAACGCGCGCCAGGTGCGTGGTCCGGTT CTGCTGTCGCCTTACGCCTGGAAGGGGGTTTCGTGTTTTTTTATTCTGTG GGGGTCCTCTCTTTTCGCCGACCGGCTTTCGGTTCTTGATGCCCGCGTCG CAGCCGTTTTTGCCGTCCGGAGGCTGACAGCATCTGATGCGTCACACGCA CTACTGCAGCTGCTGTACGCTGTTTTTCGGGGGGATGTTTTGCATCGAAC GAATGTTGCAGCTGAGTTTGCGGGCGGTTGGGTTGAGAGGTGTGTATGTC GAGCGAAGATCAGGGTATCCACTAGTTCTGAGCCTCGAGTGAGCGCGCTG CACGTGGGTTGTGATGGCCTGTTGCATTACCCTTCGCGGCGGTGTGGTCA ATTGTCAGGAGAATGGACCGGCGGGGACCGAAGAAGGAAAGTCCGCCGAT GCCAACAAAGGCAAAGACAGCGGCGGCGGCGGCAGCAGCAGGAGCAAGAG CACGACGCACTTTACACCGGACGAGCTGCAAGCCATCCTGCAGGTTGGGA ATGCTTTGCGACCCAACAGCAGCAGTGTGTTCCGCGGATCTCTGCGTAGT TTCGGTGTCGGCCGTTGGTGTTCGTCTGATTTTCTTGTTTCTGACTACAA GGTAGTATGTTTGCTTTCCAAGGCGAGGTAGAACGCCGTTCTTTGAAGTA GAAGGAATGTCGCTGCCGAGGTACGTGGCTCAGATGGAAATCGTTGGAAC ACTTCGCAGTCCAGCCTTGGCGTGCTACGAGGTCTACTTTGCTGCATTAT ATGCTCCTGTCTGTTGTTCGAAACCATAGGAAGCGGTTGTGGTACACCTC GTACTCTCCGAGGCGCTTCCCAACCCGATACTACTGTACTGTAGGCTTTC GCTGCACGACGTAGCCCTGCAGTTTGATAGATACAGCCGTCCTCGTTTTT TTCGAAGAATTTACTTCCCTCTCGCGATTTTGGCACCCTCAGATCGCCGA AGACGACGACCCGTTTGGCCTGGTGGTGTCCTCCCTCTGCCCCTCCATCT TCGGCCACGAAATCGTCAAGGTGGGATTCAAGTTGTAGGGCTAGGCCGTC CGGTAGCGTGAAGCGAGATGGGAGCGTGACGTAAGCACGGAAGGTGAAGC TTCGTCGTTTCGAGTTCTCGAGCCTGCGGCTAGAACTCCTGTTTGGTGTA CATACTGGTCGTGACGTTTTCGGCATCGCGGCTGGGCTGAAAGTAGGACC GCTCGCTTTGCCAGGAAAACGATACAAGATGGTTTCCTACTCGACAGCCT TGCGAGTAACATACAACATAGACCTGTGTTGTTTCAGTTGGTTGTCAGAA ACGGCTTTGCGATGTCCCGAAGCGCGCTGTTTCTGTCTGCTTTTCTCTGG CGAGTATGTCCCTCGTTCTCTTGGCGGGCTTCGTGGTATCAACCTCGAAG CGCATTGCTTCTGCTTCTATTATCTCTCGCGAATAAATGAACACCTTTGC TGGTGGTTTCTTGGCACCAACTGCAGGCCGGGTTGATTTTGGGGCTGTTC GGAGGCACGAGCAGGAACAGCGAGGTGGCCACCAGATGCGACCCGCACGT CCTCGTGGTCGGCGATCCGGGCCTGGGCAAGAGTCAGGTACCGCCTTTTC CGTCGGTCTTTCACTCTTTGTTTCGCGAAGAACCTTGTTTGCGTAAGACG CTCGTATTTGCGTTAAATTGCCCGTTTTTCGCCCTCTTGGTCTTTCGCGT GCACGCGGAATTGTGCGGTCGGACTGCCCCATCCTCGCCTGTCTCTCGTT TGTTTTTGTCCCTTTTTTCGGTGTTGCGCCGCAGATGCTCCACGCGGCAA GCCAGGCCTCCCCGCGATCTGTATACGTCTGCGGCAACACCACCTCCACC ACGGGCCTGACGGTGGGCCTCTTGTTTTCGTCCCCACTAAATTGTACACC TTGGAAAACCCTTGAGCTTCGTATTGCCGGCCTTTGACCGCGTTTCGTTA GGTTCTCGTAGGCATTTAACCCTGTACCCCAAACCTCAGAACCGGCGGTG GACCACGATGGTATTTGTTTATTTTGTTGTTGTGTGTGTATTGGTATTGA GCCATGGAAACATCTACAACTTGGCACTCCGTACGCAAACATATTCTGTT GATGTTCGCATGGACAGACTCAAACCTCCCCCTTTGGGCACCTGCCAACA GGTGACTCTGAGCAAGGAGGGGACGTCCGGAGAGGTCGGGCTTGAGGCTG GAGCGCTGGTGCTCTCCGACCAGGTGCGTGTTGTGGTTGCCCACCATTCG TCGACGATTTTTTGTTGTTTTGTATGTTTTTGGCCGCTTCCATGGTTGCG GCGGTGCTCCTGCTTCTTTGAGAGCCGCAGTGTTGTGTGTGTTTTTTGTA TGCTGCTAAGCGCCTTTTCGCAGTAGTAAGCGGGGTAGCTTTTTCGTGGG GCCAATCACCAGAACGGTTTACACCAACTACAGATGTTCGAAAACCGAAC ACGCCCGGAGGGAGTTTGACGGTATTTGTTCCCACGTGATTGCCGCATAT CATTGGGTATGCACATATTCACAGGGCACCTGCTGCATCGACGAGTTTGA CAAGATGGGCTGCGACCCACACGCTCTGCTCGAGGCCATGGAGCAGCAGA GAATATCCATCGCCAAGGCCGGTGAGAGACGCTTCGGTCTCCTAAGCTAG CCGTAATTTTTGTAAGCCTTTTTGCGTTGAAGTTGAAGCTTTGAATTCGA GCATCTCGTTGTTGTTCCTGTGACCAGGGCACGCTGCTGATGGTCGGCTT GGTTAGGTGGCGTGTGTTTCTGTATGTCCGTTACTTGGCTGGAGATACTT GTTTAACGCTTGATAATAACGCATGGAGTTCGGGAGGAGAGTGAGAGGAC CACAAAACTTCGACGGGGTCATCGCTGACAAGAACCCCACACACATCTAA TCCTATCTACGTATATATCCGTTGCTGCGGTACGATCTAACCTGTCCATA TCCAAAGATTTGGCGAGCGCCACGCTTCTTGGTGTACTTTACTTTCGTCT TGAACCTCTACGCATCTCTACTGCCTGTTCCTTCATCCCTGCTCTCGTGC GCCCCCCCCCCCCCGCTGCTCTCCGCCGACTCTCTGTTCGATCGTTTGTT GTTGTTCGCATTGGATGCAATCAACGCCGTGGGCGTTGAAGGCGTGGTGG CCTCTCTGTCGGCCAGGTGCTCGGTACTGGCGGCTGCGAACCCCATTGGC GGGCACTACAATCGCGGGAAGACCATCGCGGAAAAC
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Coding sequence (CDS) from alignment at S-firma_F_contig10931:1559..4944+

>mRNA_S-firma_F_contig10931.1237.1 ID=mRNA_S-firma_F_contig10931.1237.1|Name=mRNA_S-firma_F_contig10931.1237.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=1602bp|location=Sequence derived from alignment at S-firma_F_contig10931:1559..4944+ (Sphaerotrichia firma ET2_F female)
GACGTCGTGACGGTTTCTGGGGTGGTTAAGTCCGTCAACGCCGAGCTCGC
CTCGGGGAGGGTCAACAAGCGCGCCAAGGCCAGCGGCCTGTACCTCATCT
ACCTCGAGGCCAACTCGCTCGTCAACGCGCGCCAGGACGTCGTGACGGTT
TCTGGGGTGGTTAAGTCCGTCAACGCCGAGCTCGCCTCGGGGAGGGTCAA
CAAGCGCGCCAAGGCCAGCGGCCTGTACCTCATCTACCTCGAGGCCAACT
CGCTCGTCAACGCGCGCCAGGAGAATGGACCGGCGGGGACCGAAGAAGGA
AAGTCCGCCGATGCCAACAAAGGCAAAGACAGCGGCGGCGGCGGCAGCAG
CAGGAGCAAGAGCACGACGCACTTTACACCGGACGAGCTGCAAGCCATCC
TGCAGGAGAATGGACCGGCGGGGACCGAAGAAGGAAAGTCCGCCGATGCC
AACAAAGGCAAAGACAGCGGCGGCGGCGGCAGCAGCAGGAGCAAGAGCAC
GACGCACTTTACACCGGACGAGCTGCAAGCCATCCTGCAGATCGCCGAAG
ACGACGACCCGTTTGGCCTGGTGGTGTCCTCCCTCTGCCCCTCCATCTTC
GGCCACGAAATCGTCAAGATCGCCGAAGACGACGACCCGTTTGGCCTGGT
GGTGTCCTCCCTCTGCCCCTCCATCTTCGGCCACGAAATCGTCAAGGCCG
GGTTGATTTTGGGGCTGTTCGGAGGCACGAGCAGGAACAGCGAGGTGGCC
ACCAGATGCGACCCGCACGTCCTCGTGGTCGGCGATCCGGGCCTGGGCAA
GAGTCAGGCCGGGTTGATTTTGGGGCTGTTCGGAGGCACGAGCAGGAACA
GCGAGGTGGCCACCAGATGCGACCCGCACGTCCTCGTGGTCGGCGATCCG
GGCCTGGGCAAGAGTCAGATGCTCCACGCGGCAAGCCAGGCCTCCCCGCG
ATCTGTATACGTCTGCGGCAACACCACCTCCACCACGGGCCTGACGATGC
TCCACGCGGCAAGCCAGGCCTCCCCGCGATCTGTATACGTCTGCGGCAAC
ACCACCTCCACCACGGGCCTGACGGTGACTCTGAGCAAGGAGGGGACGTC
CGGAGAGGTCGGGCTTGAGGCTGGAGCGCTGGTGCTCTCCGACCAGGTGA
CTCTGAGCAAGGAGGGGACGTCCGGAGAGGTCGGGCTTGAGGCTGGAGCG
CTGGTGCTCTCCGACCAGGGCACCTGCTGCATCGACGAGTTTGACAAGAT
GGGCTGCGACCCACACGCTCTGCTCGAGGCCATGGAGCAGCAGAGAATAT
CCATCGCCAAGGCCGGGCACCTGCTGCATCGACGAGTTTGACAAGATGGG
CTGCGACCCACACGCTCTGCTCGAGGCCATGGAGCAGCAGAGAATATCCA
TCGCCAAGGCCGGCGTGGTGGCCTCTCTGTCGGCCAGGTGCTCGGTACTG
GCGGCTGCGAACCCCATTGGCGGGCACTACAATCGCGGGAAGACCATCGC
GGAAAACGCGTGGTGGCCTCTCTGTCGGCCAGGTGCTCGGTACTGGCGGC
TGCGAACCCCATTGGCGGGCACTACAATCGCGGGAAGACCATCGCGGAAA
AC
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