mRNA_S-firma_F_contig1091.1217.1 (mRNA) Sphaerotrichia firma ET2_F female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-firma_F_contig1091.1217.1
Unique NamemRNA_S-firma_F_contig1091.1217.1
TypemRNA
OrganismSphaerotrichia firma ET2_F female (Sphaerotrichia firma ET2_F female)
Homology
BLAST of mRNA_S-firma_F_contig1091.1217.1 vs. uniprot
Match: L8GX63_ACACA (Malate/Llactate dehydrogenase n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GX63_ACACA)

HSP 1 Score: 286 bits (732), Expect = 4.090e-91
Identity = 162/355 (45.63%), Postives = 221/355 (62.25%), Query Frame = 1
Query:   25 RLKAFVCKLLSAAGCSEFTGTAVATGLCEASLRGTDTHGIKLLNHYLRNIAAGGLNPTPRFTVASPFPAVAVLDADNGPGLAAGCRAVDVGINIASSMGAAVVLVTNTTHPGALSTFAMRAARRGYVCMFASNTGPKMVSHGGRRAFFGTNPWAFGAPVAGGEPMVVDMATTAIPWNKVQQGRATGITLPSGVVVDDAGLPTTDPHAADALTPPGPAGAHKGYALAAMVETLSCILTDMAWGHHTIEMYRNESSLKLKRGLGHWCFIMRPDAKFLGTNTFATKLRSMRDELRAEPALPGHSVMLPGDPEEKCAARRRVDGIPVDYVTVADLSAWAKRFNIEAP--FETVAPTSKL 1083
            +L+ F   +L  AGC   +  AVA  L E SLRG D+HGI+LL HY+ N+  GG+N  P  T +S +PA  VLDAD+  G AAG +A+D+GI  A   G A V V N+THPG ++++ +RAA +GY+    +NTGPK++SH G++ +FGTNP AF  P    EP  +DMAT+ IPWNKV+  R TG  LP G V D+ G PTTDPH A +L     AG++KG+ LAAMVE L   L  MA+GHHT++MY   S +  KR LG +  + R DA  +    F   ++ M +E+R+EP     +VMLP DPE K    RR  GIP+D V + +L A  +RF++  P    + + T+KL
Sbjct:   11 QLELFARAVLEKAGCEVPSAEAVAWSLTEGSLRGVDSHGIRLLPHYVENLVHGGINGKPNMTWSSTYPAFVVLDADHAFGAAAGFKAIDIGIERAQQYGVAAVGVINSTHPGMMASYVLRAAAQGYLAFAFTNTGPKILSHNGKQPYFGTNPIAFACPRLEKEPFCLDMATSMIPWNKVEAARKTGKQLPEGTVADEEGNPTTDPHVASSLLA---AGSYKGFGLAAMVELLCTALLGMAFGHHTVQMYGPTSDMSEKRRLGQFYLVARCDA-CVSLPQFLQAVQQMTNEVRSEPPKES-AVMLPNDPEIKVEVVRRQHGIPLDEVVLGELVALGRRFSVPFPPLLSSSSSTAKL 360          
BLAST of mRNA_S-firma_F_contig1091.1217.1 vs. uniprot
Match: A0A1Z8LG40_9PROT (Uncharacterized protein n=2 Tax=Rhodospirillales TaxID=204441 RepID=A0A1Z8LG40_9PROT)

HSP 1 Score: 260 bits (664), Expect = 5.170e-81
Identity = 150/346 (43.35%), Postives = 210/346 (60.69%), Query Frame = 1
Query:   13 VQFDRLKAFVCKLLSAAGCSEFTGTAVATGLCEASLRGTDTHGIKLLNHYLRNIAAGGLNPTPRFTVASPFPAVAVLDADNGPGLAAGCRAVDVGINIASSMGAAVVLVTNTTHPGALSTFAMRAARRGYVCMFASNTGPKMVSHGGRRAFFGTNPWAFGAPVAGGEPMVVDMATTAIPWNKVQQGRATGITLPSGVVVDDAGLPTTDPHAADALTPPG-PAGAHKGYALAAMVETLSCILTDMAWGHHTIEMYRNESSLKLKRGLGHWCFIMRPDAKFLGT-NTFATKLRSMRDELRAEPALPGHSVMLPGDPEEKCAARRRVDGIPVDYVTVADLSAWAKRFNI 1044
            + FD L +F  ++L+ AG  EF+  AV  GLCE SLRG D+HG++LL HY+++   G  NP P    A  FPA  +LDADNG G AAG +A+D G+ +A + G   V+V N++HPGA+++F ++AAR+GY+    ++    ++S GGRR  FGTNP    AP    EP  +DMAT+ I WN+++  R TG+ LP+ +  DDAGLPT DP  A +L   G P+ A+KGYAL  MVE L  +L+ MA G     MY   + +   R LG +  +MR D   +G  + F  +++S+ D  RAEPA     VM PGDP+ + A  RR  GIP+D  T+      +K FNI
Sbjct:    4 ITFDNLTSFTYQVLAHAGLDEFSNDAVTNGLCETSLRGVDSHGVRLLPHYVKSAMQGRKNPVPNMVFAHKFPAFGLLDADNGFGHAAGMKAIDYGMEMAQTSGIGGVVVANSSHPGAMASFVLKAARQGYIAFAFTHADALVLSAGGRRPLFGTNPICMAAPREEIEPYCLDMATSVISWNQLKIHRDTGLELPNSLAADDAGLPTQDPDVATSLMALGSPSAAYKGYALGTMVEILCGVLSGMAVGRDIPAMYT--APMDQPRHLGQFYLVMRTD--IVGEKDDFCRRMQSLTDMARAEPAKDPRGVMFPGDPQIREAVVRRKIGIPIDSKTLTAFHNLSKNFNI 345          
BLAST of mRNA_S-firma_F_contig1091.1217.1 vs. uniprot
Match: A0A2E5R493_9PROT (Uncharacterized protein n=3 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A2E5R493_9PROT)

HSP 1 Score: 257 bits (657), Expect = 5.490e-80
Identity = 150/351 (42.74%), Postives = 211/351 (60.11%), Query Frame = 1
Query:    7 SVVQFDRLKAFVCKLLSAAGCSEFTGTAVATGLCEASLRGTDTHGIKLLNHYLRNIAAGGLNPTPRFTVASPFPAVAVLDADNGPGLAAGCRAVDVGINIASSMGAAVVLVTNTTHPGALSTFAMRAARRGYVCMFASNTGPKMVSHGGRRAFFGTNPWAFGAPVAGGEPMVVDMATTAIPWNKVQQGRATGITLPSGVVVDDAGLPTTDPHAADALTPPGPAGAHKGYALAAMVETLSCILTDMAWGHHTIEMYRNESSLKLKRGLGHWCFIMRPDAKFLGTNTFATKLRSMRDELRAEPALPGHSVMLPGDPEEKCAARRRVDGIPVDYVTVADLSAWAKRFNIEAPFE 1059
            +++ +  L  F  K+L   G    +  +V+ GLCEASLRG D+HGIKLL HY+++   G  NPTP F     FP+V VLDADN  G AAG  A+D  I +A   G   V V N++HPGAL++  ++AAR+GY+    ++    M+SHGG+R++FGTNP +F AP    EP  +DMAT+ I WNK+   + T   L   +  D  G   +DP  A +L P   AG++KGY LA+MVE LS ILT M +G     MY   +S++  R LG +  ++RPDA FL +N F ++++ + DE+R EPA  G  VMLP DPE   +  R   GIPVD V   +L   A+ F+++  F+
Sbjct:    2 NLITYKNLLNFTKKILKETGLDSKSVNSVSLGLCEASLRGVDSHGIKLLPHYIKSAQLGRKNPTPSFIFTKTFPSVGVLDADNAFGHAAGIEAIDCCIKLAKKNGIGAVAVRNSSHPGALASMTIKAARKGYISFAFTHADSLMLSHGGKRSYFGTNPISFAAPRKEKEPYCLDMATSMISWNKLLNLKNTKQNLEKNLSADKDGNMVSDPELAVSLLP---AGSYKGYGLASMVEILSGILTGMNFGRSIPSMYA--ASMRKPRHLGQFYIVIRPDA-FLNSNKFISRMQKLTDEIRKEPAKKGKKVMLPNDPEIIASKERLKKGIPVDKVLKIELEKLARIFSVKLIFK 346          
BLAST of mRNA_S-firma_F_contig1091.1217.1 vs. uniprot
Match: A0A0F4R8U2_9GAMM (Uncharacterized protein n=1 Tax=Marinomonas sp. S3726 TaxID=579484 RepID=A0A0F4R8U2_9GAMM)

HSP 1 Score: 233 bits (594), Expect = 1.610e-70
Identity = 137/339 (40.41%), Postives = 197/339 (58.11%), Query Frame = 1
Query:   40 VCK-LLSAAGCSEFTGTAVATGLCEASLRGTDTHGIKLLNHYLRNIAAGGLNPTPRFTVASPFPAVAVLDADNGPGLAAGCRAVDVGINIASSMGAAVVLVTNTTHPGALSTFAMRAARRGYVCMFASNTGPKMVSHGGRRAFFGTNPWAFGAPVAGGEPMVVDMATTAIPWNKVQQGRATGITLPSGVVVDDAGLPTTDPHAADALTPPGPAGAHKGYALAAMVETLSCILTDMAWGHHTIEMYRNESSLKLKRGLGHWCFIMRPDAKFLGTNTFATKLRSMRDELRAEPALPGHSVMLPGDPEEKCAARRRVDGIPVDYVTVADLSAWAKRFNIEAP 1053
            +CK LL A+GC E T  +VA GLCEASLRG D+HGI+LL HYL ++ +G  N TP+F+    +P++A L+ADN  GLAAG  A++ G+ +A   G + + V N++HP A+++ A+ AAR+GY+    +N    ++S  G R FFGTNP  F AP    EP  +DMA + IPWNKV   + TG TLP  V+ D  G  T DP  A +L      G +KG+ LAAMVE L  + +    G     MY   + +   R L     +M+ D   +  + F  ++  + D +R+EP+  G  VMLP DP+ +   +R   G+P+D +TV  LS     FN++ P
Sbjct:   13 LCKDLLQASGCDELTTNSVAEGLCEASLRGVDSHGIRLLPHYLNSLDSGRKNGTPKFSFTYKYPSIAKLNADNAVGLAAGRAAINEGMRLADEYGISAISVHNSSHPAAMASTALFAARKGYLVFAYTNADALVLSENGTRPFFGTNPVCFAAPRRKEEPFCLDMAVSKIPWNKVLLAKNTGETLPDQVIADKYGQSTNDPIEASSLYA---TGGYKGFGLAAMVEILCGVFSAGPIGRELKSMYG--APMDKGRDLSQMYVLMKCDGA-VSESLFLDRMSDLSDMVRSEPSQEGKKVMLPNDPQIENMKKRLGSGVPIDLITVEQLSEKTSEFNLKMP 345          
BLAST of mRNA_S-firma_F_contig1091.1217.1 vs. uniprot
Match: A0A6M4FTM8_9GAMM (Ldh family oxidoreductase n=1 Tax=Halomonas sp. PA5 TaxID=2730357 RepID=A0A6M4FTM8_9GAMM)

HSP 1 Score: 233 bits (593), Expect = 2.950e-70
Identity = 147/353 (41.64%), Postives = 198/353 (56.09%), Query Frame = 1
Query:   13 VQFDRLKAFVCKLLSAAGCSEFTGTAVATGLCEASLRGTDTHGIKLLNHYLRNIAAGGLNPTPRFTVASPFPAVAVLDADNGPGLAAGCRAVDVGINIASSMGAAVVLVTNTTHPGALSTFAMRAARRGYVCMFASNTGPKMVSHGGRRAFFGTNPWAFGAPVAGGEPMVVDMATTAIPWNKVQQGRATGITLPSGVVVDDAGLPTTDPHAADALTP-PGPAGAHKGYALAAMVETLSCILTDMAWGHHTIEMYRNESSLKLKRGLGHWCFIMRPDAKFLGTNTFATKLRSMRDELRAEPALPGHSVMLPGDPEEKCAARRRVDGIPVDYVTVADLSAWAKRFNIEAPFETVA 1068
            V  D L  F+ K+L A+G  E +  AV   L  AS  GTD+HG++LL HY+  +  G +NP P    A    A   LDAD+G G  AG  A+D  I +A  +G   V V  ++H GA   +++ AA RGY+ +   N+ P ++ H GR+ F GTNP AF APV G  P ++DMAT+AIPWN+VQQ  A G  LPS V  D  G  T  PH   AL P  G A   KG  L  MVE LS  L+ M  G   + M  N   +   RG+ H+  +M+PDA F   ++F   + +  D+LR++PALPG  V+ PGD E +C A+R   GIP+D       +  A+RF IE P ++VA
Sbjct:   10 VAVDDLTRFMSKVLEASGADEPSTQAVTRALVTASRMGTDSHGLRLLPHYVAALQGGRINPHPEMRFARRLAATGYLDADDGLGHLAGYAAIDHAIAMAGEVGIGAVAVGRSSHFGAAGCYSLAAAERGYIALSVCNSDPFVLLHEGRQPFHGTNPLAFAAPVDGQVPYLLDMATSAIPWNRVQQYGAIGRGLPSEVAADAEGNVTCWPHDVSALLPLGGSAFGFKGAGLGGMVEILSSTLSGMLNGFRLLPM--NGDDMATPRGVAHFFLVMKPDA-FAERDSFQACMTAYLDDLRSQPALPGAEVLAPGDREWRCQAQRDAHGIPLDSANQRAYAELAERFGIE-PVKSVA 358          
BLAST of mRNA_S-firma_F_contig1091.1217.1 vs. uniprot
Match: A0A2E5I974_9GAMM (Uncharacterized protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A2E5I974_9GAMM)

HSP 1 Score: 230 bits (586), Expect = 2.320e-69
Identity = 138/346 (39.88%), Postives = 194/346 (56.07%), Query Frame = 1
Query:    7 SVVQFDRLKAFVCKLLSAAGCSEFTGTAVATGLCEASLRGTDTHGIKLLNHYLRNIAAGGLNPTPRFTVASPFPAVAVLDADNGPGLAAGCRAVDVGINIASSMGAAVVLVTNTTHPGALSTFAMRAARRGYVCMFASNTGPKMVSHGGRRAFFGTNPWAFGAPVAGGEPMVVDMATTAIPWNKVQQGRATGITLPSGVVVDDAGLPTTDPHAADALTPPGPAGAHKGYALAAMVETLSCILTDMAWGHHTIEMYRNESSLKLKRGLGHWCFIMRPDAKFLGTNTFATKLRSMRDELRAEPALPGHSVMLPGDPEEKCAARRRVDGIPVDYVTVADLSAWAKRFNI 1044
            S +Q+  L +F   +L+      F+  AV+ GL EASLRG D+HGI+LL HY+++  +G  NP P F ++S FPA   LDADN  G +AG +++D GI  +   G + V V N++HPGAL++  +RAARRGY+    ++    M+S+ G R FFGTNP +F AP    EP  +DMAT+ I WNK++  R  G  L   +  DD GL T DP  A  L P    G +KGY LA+MV+ L  + T M +      M+  E  + L R LG    IMR D   +    F   L+ + D +RAEP+  G  V+ P DPE  C+  R   GIP++   + DL   +K   +
Sbjct:    2 SSIQYKELLSFTKNVLTKVNLDNFSSEAVSKGLSEASLRGVDSHGIRLLPHYVQSSLSGRKNPKPNFKISSKFPASISLDADNAFGHSAGFKSIDEGIKASEKYGISQVNVFNSSHPGALASMTLRAARRGYIAFAFTHADSLMLSYNGVRPFFGTNPISFAAPRLEKEPYCLDMATSMISWNKLKNFREEGKELEPNIAADDLGLSTNDPLEASQLFP---IGYYKGYGLASMVDILCSVNTGMNFARSIPSMF--EYDMSLPRRLGQSYIIMRTDLT-VSKREFKASLQELTDLIRAEPSQEGKRVLCPNDPEIACSKIRLEQGIPLEQAVLKDLQILSKDLEV 341          
BLAST of mRNA_S-firma_F_contig1091.1217.1 vs. uniprot
Match: A0A139C6R3_9GAMM (Malate dehydrogenase n=3 Tax=Halomonadaceae TaxID=28256 RepID=A0A139C6R3_9GAMM)

HSP 1 Score: 230 bits (586), Expect = 3.100e-69
Identity = 144/351 (41.03%), Postives = 196/351 (55.84%), Query Frame = 1
Query:    1 MASVVQFDRLKAFVCKLLSAAGCSEFTGTAVATGLCEASLRGTDTHGIKLLNHYLRNIAAGGLNPTPRFTVASPFPAVAVLDADNGPGLAAGCRAVDVGINIASSMGAAVVLVTNTTHPGALSTFAMRAARRGYVCMFASNTGPKMVSHGGRRAFFGTNPWAFGAPVAGGEPMVVDMATTAIPWNKVQQGRATGITLPSGVVVDDAGLPTTDPHAADALTPPGPAG-AHKGYALAAMVETLSCILTDMAWGHHTIEMYRNESSLKLKRGLGHWCFIMRPDAKFLGTNTFATKLRSMRDELRAEPALPGHSVMLPGDPEEKCAARRRVDGIPVDYVTVADLSAWAKRFNIEA 1050
            +A+ V  + L+ F+ + L      + +  AVA  L  AS  GTD+HG++LL HY+R +  G +   P        PA   LDAD+G G  AG +A+D  I +A   G   V V N++H GA   +A+ AARRGY+ M        +  H G  AF GTNP AF APVA G+P +VDMAT++IPWN+VQQ RA   TLP  VVVD+ G  TTDPH A +L P G A    KG ALA MVE LS  L+ M  G   + M   +  +   RG+GH+  +M P A F+    +   + +  ++LRA+PA  G  V+ PGD E +C A+R  +GIP+D   VA     A+   + A
Sbjct:    5 IAARVPAEELRRFMHEALLRCDVDDTSAEAVARALLTASRMGTDSHGLRLLPHYIRALQGGRIKARPAMRFTQRLPATGYLDADDGLGHPAGYQAIDRAIAMAEETGMGAVAVGNSSHFGAAGCYALEAARRGYMGMAFCTADALVNLHDGTNAFHGTNPIAFAAPVASGQPYLVDMATSSIPWNRVQQYRAIDRTLPPNVVVDEHGGLTTDPHTAASLLPLGGADFGFKGAALAGMVEVLSASLSGMLHGFRLLPMIGED--MHTPRGIGHFFLVMNPGA-FVEREVYERAIAAYLEDLRAQPAGEGSEVLAPGDREWRCQAQRDAEGIPLDSANVAAYRQLAESLGVTA 352          
BLAST of mRNA_S-firma_F_contig1091.1217.1 vs. uniprot
Match: W9H3E2_9PROT (Uncharacterized protein n=1 Tax=Skermanella stibiiresistens SB22 TaxID=1385369 RepID=W9H3E2_9PROT)

HSP 1 Score: 228 bits (582), Expect = 1.500e-68
Identity = 139/343 (40.52%), Postives = 194/343 (56.56%), Query Frame = 1
Query:   28 LKAFVCKLLSAAGCSEFTGTAVATGLCEASLRGTDTHGIKLLNHYLRNIAAGGLNPTPRFTVASPFPAVAVLDADNGPGLAAGCRAVDVGINIASSMGAAVVLVTNTTHPGALSTFAMRAARRGYVCMFASNTGPKMVSHGGRRAFFGTNPWAFGAPVAGGEPMVVDMATTAIPWNKVQQGRATGITLPSGVVVDDAGLPTTDPHAADALTPPGPAG-AHKGYALAAMVETLSCILTDMAWGHHTIEMYRNESSLKLKRGLGHWCFIMRPDAKFLGTNTFATKLRSMRDELRAEPALPGHSVMLPGDPEEKCAARRRVDGIPVDYVTVADLSAWAKRFNIEAP 1053
            L +F+ +LLS AG  + +  AV+  + +AS RG DTHG++LL HY+R +  G +N +P        PA+  LDADNG G  A  RA++ G+ +A + G A V V N++H GA   + + AA  GY  +  +NT   +V HGG +AF+GTNP +F  PV G +P+++DMAT+++P N+V   RATG  LP  V VD  G  TTD HAA AL P G     HKG  LA MV+ L      M  GH    M            LGH+  I++P+  F   + F   + +   +LR++PA PG  VM PGDPE +  A R  +G+P+D VT A L      F++ AP
Sbjct:   14 LGSFIVQLLSRAGADDPSAAAVSRAVVDASARGFDTHGVRLLPHYMRTLKGGRINRSPNLGFTKSAPAIGHLDADNGFGHPASYRAIEEGMAMADATGIAAVTVRNSSHHGATGCYTIVAAENGYTAIGMTNTDSIVVPHGGTKAFYGTNPISFAVPVVGEQPLLLDMATSSVPLNRVFLRRATGAPLPPEVAVDADGEMTTDAHAAQALLPLGGLMFGHKGAGLACMVDLLCSAFAGM--GHGATLMPFGGPDFSTPCPLGHFFLILKPEL-FQPLDGFNDSVAAFLKDLRSQPAHPGTRVMAPGDPEREAIADREANGVPIDPVTWAALQELGGEFDLTAP 353          
BLAST of mRNA_S-firma_F_contig1091.1217.1 vs. uniprot
Match: A0A370U8D3_9GAMM (Ldh family oxidoreductase n=1 Tax=Marinomonas piezotolerans TaxID=2213058 RepID=A0A370U8D3_9GAMM)

HSP 1 Score: 227 bits (579), Expect = 2.830e-68
Identity = 137/339 (40.41%), Postives = 195/339 (57.52%), Query Frame = 1
Query:   40 VCK-LLSAAGCSEFTGTAVATGLCEASLRGTDTHGIKLLNHYLRNIAAGGLNPTPRFTVASPFPAVAVLDADNGPGLAAGCRAVDVGINIASSMGAAVVLVTNTTHPGALSTFAMRAARRGYVCMFASNTGPKMVSHGGRRAFFGTNPWAFGAPVAGGEPMVVDMATTAIPWNKVQQGRATGITLPSGVVVDDAGLPTTDPHAADALTPPGPAGAHKGYALAAMVETLSCILTDMAWGHHTIEMYRNESSLKLKRGLGHWCFIMRPDAKFLGTNTFATKLRSMRDELRAEPALPGHSVMLPGDPEEKCAARRRVDGIPVDYVTVADLSAWAKRFNIEAP 1053
            +CK +L A+GC++F+  AVA GLCEASLRG D+HGI+LL HYL ++  G  N  P F +   +P+VA L+ADN  GLAAG  A+   + +A   G + + V N++HP A+++ A+ AAR+GY+    +N    ++S  G R FFGTNP  F AP    EP  +DMA + +PWNKV   + TG  LP G V D  GL T DP  A +L P   AG +KG+ LAAMVE +  +      G     MY   + +   R L     +M+ DA  +  + F  ++  +   +R EPA  G  VM+P DP+   A  R  +G+P+D VT++ LS  A+ F +  P
Sbjct:   13 LCKGVLIASGCNQFSTDAVAEGLCEASLRGVDSHGIRLLPHYLNSLKEGRKNGNPDFGLTYKYPSVARLNADNAVGLAAGRFAIIEAMKLADEYGVSAISVHNSSHPAAMASTALTAARKGYLVFAFTNADALVLSENGTRPFFGTNPVCFAAPRRNEEPFCLDMAVSKMPWNKVLLAKNTGDKLPDGYVADSDGLETNDPVEARSLFP---AGEYKGFGLAAMVEVMCGVFAGGPIGRELKAMYN--APMDQGRDLSQMYIVMKCDAS-VSESLFLDRMSDLTQMVRNEPAKEGKKVMMPNDPQINNAKERDKNGVPLDEVTISLLSEAAESFGLSMP 345          
BLAST of mRNA_S-firma_F_contig1091.1217.1 vs. uniprot
Match: UPI00036E7CEB (Ldh family oxidoreductase n=2 Tax=Halomonas TaxID=2745 RepID=UPI00036E7CEB)

HSP 1 Score: 225 bits (573), Expect = 2.730e-67
Identity = 141/352 (40.06%), Postives = 196/352 (55.68%), Query Frame = 1
Query:    1 MASVVQFDRLKAFVCKLLSAAGCSEFTGTAVATGLCEASLRGTDTHGIKLLNHYLRNIAAGGLNPTPRFTVASPFPAVAVLDADNGPGLAAGCRAVDVGINIASSMGAAVVLVTNTTHPGALSTFAMRAARRGYVCMFASNTGPKMVSHGGRRAFFGTNPWAFGAPVAGGEPMVVDMATTAIPWNKVQQGRATGITLPSGVVVDDAGLPTTDPHAADALTPPGPAG-AHKGYALAAMVETLSCILTDMAWGHHTIEMYRNESSLKLKRGLGHWCFIMRPDAKFLGTNTFATKLRSMRDELRAEPALPGHSVMLPGDPEEKCAARRRVDGIPVDYVTVADLSAWAKRFNIEAP 1053
            +A+ +    L+ F+ ++L      E +  AV   L  AS  GTD+HG++LL HY++ +  G +N  P  T      A   LDAD+G G  AG +AV+  I +A + G   V V N++H GA   +A+ AARRGY+ +   N    +  H G+  F GTNP AF APV   +P ++DMAT++IPWN+V+Q RA   TLP+ VVVD  G  TTDPH A +L P G A    KG  LA MVE LS  LT M  G   + M   + S    RG+GH+  +M P A F    T+   + +  ++LRA+PAL G  VM PGD E +C A+R  +GIP+D   +A     A+   +  P
Sbjct:    5 IAARIAVSELEDFMRRVLLRCDTDEASAEAVTQALVTASRMGTDSHGLRLLPHYVQAVQGGRINGRPNPTFTQRLAATGYLDADDGFGHLAGYQAVEHAIELAETAGIGAVAVGNSSHFGAAGCYALAAARRGYIGLSLCNADALVSLHQGQSPFHGTNPIAFAAPVPDSQPYLLDMATSSIPWNRVKQYRAINRTLPANVVVDAQGELTTDPHMAASLLPLGGADFGFKGAGLAGMVEVLSATLTGMIHGFRMLPMTGEDMSTP--RGVGHFFLVMHPGA-FSDRQTYERAILAYLEDLRAQPALEGKQVMAPGDREWQCQAQRDAEGIPLDSANLAAYRQLAETLGLAPP 353          
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig1091.1217.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
L8GX63_ACACA4.090e-9145.63Malate/Llactate dehydrogenase n=1 Tax=Acanthamoeba... [more]
A0A1Z8LG40_9PROT5.170e-8143.35Uncharacterized protein n=2 Tax=Rhodospirillales T... [more]
A0A2E5R493_9PROT5.490e-8042.74Uncharacterized protein n=3 Tax=Alphaproteobacteri... [more]
A0A0F4R8U2_9GAMM1.610e-7040.41Uncharacterized protein n=1 Tax=Marinomonas sp. S3... [more]
A0A6M4FTM8_9GAMM2.950e-7041.64Ldh family oxidoreductase n=1 Tax=Halomonas sp. PA... [more]
A0A2E5I974_9GAMM2.320e-6939.88Uncharacterized protein n=1 Tax=Gammaproteobacteri... [more]
A0A139C6R3_9GAMM3.100e-6941.03Malate dehydrogenase n=3 Tax=Halomonadaceae TaxID=... [more]
W9H3E2_9PROT1.500e-6840.52Uncharacterized protein n=1 Tax=Skermanella stibii... [more]
A0A370U8D3_9GAMM2.830e-6840.41Ldh family oxidoreductase n=1 Tax=Marinomonas piez... [more]
UPI00036E7CEB2.730e-6740.06Ldh family oxidoreductase n=2 Tax=Halomonas TaxID=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_F_contig1091contigS-firma_F_contig1091:19119..20448 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef902022-09-19
OGS1.0 of Sphaerotrichia firma ET2_F female2021-02-24
Properties
Property NameValue
Seed ortholog1121943.KB899990_gene3960
Preferred nameallD
PFAMsLdh_2
Max annot lvl1236|Gammaproteobacteria
KEGG rclassRC00169
KEGG koko:K00073
KEGG ReactionR02935,R02936
KEGG Pathwayko00230,ko01120,map00230,map01120
GOsGO:0000255,GO:0000256,GO:0003674,GO:0003824,GO:0006807,GO:0008150,GO:0008152,GO:0009040,GO:0009056,GO:0009442,GO:0009987,GO:0016491,GO:0016614,GO:0016616,GO:0017144,GO:0034641,GO:0042737,GO:0043603,GO:0043605,GO:0044237,GO:0044248,GO:0044270,GO:0046483,GO:0046700,GO:0055114,GO:0071704,GO:1901360,GO:1901361,GO:1901564,GO:1901565,GO:1901575
Evalue4.47e-68
EggNOG OGsCOG2055@1|root,COG2055@2|Bacteria,1MWQY@1224|Proteobacteria,1RSKW@1236|Gammaproteobacteria
EC1.1.1.350
DescriptionBelongs to the LDH2 MDH2 oxidoreductase family
COG categoryC
BiGG ReactioniEC042_1314.EC042_0560
BRITEko00000,ko00001,ko01000
Hectar predicted targeting categoryother localisation
Exons4
Model size1086
Cds size1086
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_F_contig1091.1217.1prot_S-firma_F_contig1091.1217.1Sphaerotrichia firma ET2_F femalepolypeptideS-firma_F_contig1091 19119..20448 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815635.712093-CDS-S-firma_F_contig1091:19118..194581622815635.712093-CDS-S-firma_F_contig1091:19118..19458Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig1091 19119..19458 -
1696949469.4665704-CDS-S-firma_F_contig1091:19118..194581696949469.4665704-CDS-S-firma_F_contig1091:19118..19458Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig1091 19119..19458 -
1622815635.7252464-CDS-S-firma_F_contig1091:19524..197311622815635.7252464-CDS-S-firma_F_contig1091:19524..19731Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig1091 19525..19731 -
1696949469.5032856-CDS-S-firma_F_contig1091:19524..197311696949469.5032856-CDS-S-firma_F_contig1091:19524..19731Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig1091 19525..19731 -
1622815635.7358675-CDS-S-firma_F_contig1091:19787..201621622815635.7358675-CDS-S-firma_F_contig1091:19787..20162Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig1091 19788..20162 -
1696949469.5148792-CDS-S-firma_F_contig1091:19787..201621696949469.5148792-CDS-S-firma_F_contig1091:19787..20162Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig1091 19788..20162 -
1622815635.7469203-CDS-S-firma_F_contig1091:20284..204481622815635.7469203-CDS-S-firma_F_contig1091:20284..20448Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig1091 20285..20448 -
1696949469.5251722-CDS-S-firma_F_contig1091:20284..204481696949469.5251722-CDS-S-firma_F_contig1091:20284..20448Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig1091 20285..20448 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-firma_F_contig1091.1217.1

>prot_S-firma_F_contig1091.1217.1 ID=prot_S-firma_F_contig1091.1217.1|Name=mRNA_S-firma_F_contig1091.1217.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=362bp
MASVVQFDRLKAFVCKLLSAAGCSEFTGTAVATGLCEASLRGTDTHGIKL
LNHYLRNIAAGGLNPTPRFTVASPFPAVAVLDADNGPGLAAGCRAVDVGI
NIASSMGAAVVLVTNTTHPGALSTFAMRAARRGYVCMFASNTGPKMVSHG
GRRAFFGTNPWAFGAPVAGGEPMVVDMATTAIPWNKVQQGRATGITLPSG
VVVDDAGLPTTDPHAADALTPPGPAGAHKGYALAAMVETLSCILTDMAWG
HHTIEMYRNESSLKLKRGLGHWCFIMRPDAKFLGTNTFATKLRSMRDELR
AEPALPGHSVMLPGDPEEKCAARRRVDGIPVDYVTVADLSAWAKRFNIEA
PFETVAPTSKL*
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mRNA from alignment at S-firma_F_contig1091:19119..20448-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-firma_F_contig1091.1217.1 ID=mRNA_S-firma_F_contig1091.1217.1|Name=mRNA_S-firma_F_contig1091.1217.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=1330bp|location=Sequence derived from alignment at S-firma_F_contig1091:19119..20448- (Sphaerotrichia firma ET2_F female)
ATGGCTTCCGTCGTCCAGTTTGACCGCCTCAAGGCGTTTGTGTGCAAGCT GCTGTCTGCAGCTGGGTGCTCGGAGTTCACAGGGACTGCTGTCGCCACTG GACTGTGTGAGGCAAGCCTGCGGGGCACCGACACCCACGGCATCAAGCTT CTGAACCATTATTTGTCAGTGTCTCTCTCTCGTTCTCCCTCTTTCTCTCT CTTTCTCTCTCTTTCTCTCTGTGTGGCAATGTGTGCGTGTGCGGCAATGT GTGTTCAGCATTGCTTTCACCCCCACCACAACACAGGCGCAACATTGCGG CTGGTGGCCTCAACCCCACCCCTCGGTTCACAGTGGCATCGCCGTTCCCC GCTGTTGCCGTGTTGGACGCGGACAATGGGCCTGGTTTGGCGGCCGGGTG CCGTGCGGTGGACGTCGGCATCAACATTGCTTCCAGCATGGGTGCCGCCG TGGTGCTCGTGACGAACACGACGCACCCTGGGGCGTTGTCCACGTTTGCC ATGCGAGCTGCTCGCCGTGGGTACGTTTGCATGTTTGCGTCAAACACTGG TCCCAAAATGGTGTCCCACGGCGGCCGTCGCGCCTTTTTTGGCACCAACC CGTGGGCGTTCGGCGCCCCGGTGGCAGGTGGCGAGCCCATGGTCGTCGAC ATGGCCACAACGTGGGTGTTGGCTTATCATGTGCGCTGTCAATGTCACAA GGCTGTGTGTTGCGCAGAGCAATTCCGTGGAACAAGGTTCAGCAAGGGCG CGCCACGGGCATCACATTGCCTAGCGGTGTGGTCGTCGACGACGCCGGCT TGCCGACAACTGACCCCCACGCTGCCGACGCCCTCACGCCGCCCGGCCCG GCGGGGGCTCACAAAGGCTACGCCCTTGCCGCCATGGTGGAAACTCTGTC GTGCATCTTGACTGACATGGCATGGTGTGTGCACACTATGCGTTGCGGTG GCGCGCCAACGTCACCCCCCAACCCACCCCCCCTCAACAGGGGCCACCAC ACGATTGAGATGTACCGCAACGAGAGCAGCTTGAAGCTCAAGCGTGGCCT TGGGCACTGGTGCTTCATCATGCGCCCTGACGCCAAGTTCTTGGGCACAA ACACGTTCGCTACCAAGCTGCGCAGCATGCGGGATGAGTTGCGGGCGGAG CCCGCCCTCCCTGGCCACTCCGTGATGTTGCCGGGCGACCCAGAAGAAAA ATGCGCTGCCCGGCGCCGGGTTGACGGCATCCCCGTCGACTACGTCACGG TTGCGGACTTGTCCGCGTGGGCCAAGCGATTCAACATTGAAGCGCCATTT GAGACTGTAGCGCCGACCTCCAAGCTGTAG
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Coding sequence (CDS) from alignment at S-firma_F_contig1091:19119..20448-

>mRNA_S-firma_F_contig1091.1217.1 ID=mRNA_S-firma_F_contig1091.1217.1|Name=mRNA_S-firma_F_contig1091.1217.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=2172bp|location=Sequence derived from alignment at S-firma_F_contig1091:19119..20448- (Sphaerotrichia firma ET2_F female)
ATGGCTTCCGTCGTCCAGTTTGACCGCCTCAAGGCGTTTGTGTGCAAGCT
GCTGTCTGCAGCTGGGTGCTCGGAGTTCACAGGGACTGCTGTCGCCACTG
GACTGTGTGAGGCAAGCCTGCGGGGCACCGACACCCACGGCATCAAGCTT
CTGAACCATTATTTATGGCTTCCGTCGTCCAGTTTGACCGCCTCAAGGCG
TTTGTGTGCAAGCTGCTGTCTGCAGCTGGGTGCTCGGAGTTCACAGGGAC
TGCTGTCGCCACTGGACTGTGTGAGGCAAGCCTGCGGGGCACCGACACCC
ACGGCATCAAGCTTCTGAACCATTATTTGCGCAACATTGCGGCTGGTGGC
CTCAACCCCACCCCTCGGTTCACAGTGGCATCGCCGTTCCCCGCTGTTGC
CGTGTTGGACGCGGACAATGGGCCTGGTTTGGCGGCCGGGTGCCGTGCGG
TGGACGTCGGCATCAACATTGCTTCCAGCATGGGTGCCGCCGTGGTGCTC
GTGACGAACACGACGCACCCTGGGGCGTTGTCCACGTTTGCCATGCGAGC
TGCTCGCCGTGGGTACGTTTGCATGTTTGCGTCAAACACTGGTCCCAAAA
TGGTGTCCCACGGCGGCCGTCGCGCCTTTTTTGGCACCAACCCGTGGGCG
TTCGGCGCCCCGGTGGCAGGTGGCGAGCCCATGGTCGTCGACATGGCCAC
AACGCGCAACATTGCGGCTGGTGGCCTCAACCCCACCCCTCGGTTCACAG
TGGCATCGCCGTTCCCCGCTGTTGCCGTGTTGGACGCGGACAATGGGCCT
GGTTTGGCGGCCGGGTGCCGTGCGGTGGACGTCGGCATCAACATTGCTTC
CAGCATGGGTGCCGCCGTGGTGCTCGTGACGAACACGACGCACCCTGGGG
CGTTGTCCACGTTTGCCATGCGAGCTGCTCGCCGTGGGTACGTTTGCATG
TTTGCGTCAAACACTGGTCCCAAAATGGTGTCCCACGGCGGCCGTCGCGC
CTTTTTTGGCACCAACCCGTGGGCGTTCGGCGCCCCGGTGGCAGGTGGCG
AGCCCATGGTCGTCGACATGGCCACAACAGCAATTCCGTGGAACAAGGTT
CAGCAAGGGCGCGCCACGGGCATCACATTGCCTAGCGGTGTGGTCGTCGA
CGACGCCGGCTTGCCGACAACTGACCCCCACGCTGCCGACGCCCTCACGC
CGCCCGGCCCGGCGGGGGCTCACAAAGGCTACGCCCTTGCCGCCATGGTG
GAAACTCTGTCGTGCATCTTGACTGACATGGCATGAGCAATTCCGTGGAA
CAAGGTTCAGCAAGGGCGCGCCACGGGCATCACATTGCCTAGCGGTGTGG
TCGTCGACGACGCCGGCTTGCCGACAACTGACCCCCACGCTGCCGACGCC
CTCACGCCGCCCGGCCCGGCGGGGGCTCACAAAGGCTACGCCCTTGCCGC
CATGGTGGAAACTCTGTCGTGCATCTTGACTGACATGGCATGGGGCCACC
ACACGATTGAGATGTACCGCAACGAGAGCAGCTTGAAGCTCAAGCGTGGC
CTTGGGCACTGGTGCTTCATCATGCGCCCTGACGCCAAGTTCTTGGGCAC
AAACACGTTCGCTACCAAGCTGCGCAGCATGCGGGATGAGTTGCGGGCGG
AGCCCGCCCTCCCTGGCCACTCCGTGATGTTGCCGGGCGACCCAGAAGAA
AAATGCGCTGCCCGGCGCCGGGTTGACGGCATCCCCGTCGACTACGTCAC
GGTTGCGGACTTGTCCGCGTGGGCCAAGCGATTCAACATTGAAGCGCCAT
TTGAGACTGTAGCGCCGACCTCCAAGCTGTAGGGGCCACCACACGATTGA
GATGTACCGCAACGAGAGCAGCTTGAAGCTCAAGCGTGGCCTTGGGCACT
GGTGCTTCATCATGCGCCCTGACGCCAAGTTCTTGGGCACAAACACGTTC
GCTACCAAGCTGCGCAGCATGCGGGATGAGTTGCGGGCGGAGCCCGCCCT
CCCTGGCCACTCCGTGATGTTGCCGGGCGACCCAGAAGAAAAATGCGCTG
CCCGGCGCCGGGTTGACGGCATCCCCGTCGACTACGTCACGGTTGCGGAC
TTGTCCGCGTGGGCCAAGCGATTCAACATTGAAGCGCCATTTGAGACTGT
AGCGCCGACCTCCAAGCTGTAG
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