mRNA_S-firma_F_contig10901.1203.1 (mRNA) Sphaerotrichia firma ET2_F female
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Overview
Homology
BLAST of mRNA_S-firma_F_contig10901.1203.1 vs. uniprot
Match: D7FNX7_ECTSI (TatD DNase domain containing 3 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNX7_ECTSI) HSP 1 Score: 202 bits (513), Expect = 1.160e-60 Identity = 131/272 (48.16%), Postives = 168/272 (61.76%), Query Frame = 1
Query: 34 IDCHAHLTDPALRP-THAVLQEAAAAGVAGVVCVSETLDDAAAVLEL--------AKAQPL-VHACVGLHPVQPGDVSLTPEEVPAMVALMETAAAAGTIVGVGEVGLDFRPRVLGAD----PEAAKAGQRAAFAMQCEAANRLGLAVNIHSRSAGHHALKVVVDAGVPPGRAVFHAFDGKAKYAVAVAEAGYLLSVPPNVVRSPGMQAWIARVPLSALCLETDSPALAAEAGAVNTPSQVAVGAMEVARIKGVPVEEVVEATSANARRLFP 807
DCHAHLTD +L L EA AAGV G+V VSE+LDDA V+EL ++ + L +H +G+HP + D+ +V ++ L++ A TIV VGEVGLDF ++G E AK QR F Q A LGLAVN+HSRSAGHHA+ ++ + G+ RAV HAFDGK KYAV A+AGY SVPP V RSPG Q+ + +PL +L LETDSPAL E G N P +++ +A +KGVP + V E T+ANARRLFP
Sbjct: 2 FDCHAHLTDSSLAEGLQQTLLEAEAAGVTGIVAVSESLDDATPVVELCASINDDASRCRKLRLHPSIGMHP-EKADL----HKVDDVLELIDKHA--DTIVCVGEVGLDFSRHLIGESGGERAERAKEVQREVFRRQARRAKELGLAVNVHSRSAGHHAISLLQEEGIT--RAVLHAFDGKPKYAVQAAKAGYFFSVPPIVCRSPGFQSLVKALPLESLVLETDSPALGPEKGVRNVPGNLSISRDWIASLKGVPADVVAETTTANARRLFP 264
BLAST of mRNA_S-firma_F_contig10901.1203.1 vs. uniprot
Match: A0A1Y1Z1A8_9FUNG (Deoxyribonuclease tatdn3 n=1 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1Z1A8_9FUNG) HSP 1 Score: 192 bits (488), Expect = 7.980e-57 Identity = 121/273 (44.32%), Postives = 157/273 (57.51%), Query Frame = 1
Query: 34 IDCHAHLTDPALRPTHAV---LQEAAAAGVAGVVCVSETLDDAAAVLELAKAQPLVHACVGLHPVQPGDV----SLTPEEVPAMVALMETAAAAGTIVGVGEVGLDFRPRVLGAD------PEAAKAGQRAAFAMQCEAANRLGLAVNIHSRSAGHHALKVVVDAGVPPGRAVFHAFDGKAKYAVAVAEAGYLLSVPPNVVRSPGMQAWIARVPLSALCLETDSPALAAEAGAVNTPSQVAVGAMEVARIKGVPVEEVVEATSANARRLFPGV 813
DCHAH+ P+ P A+ LQEA AGV G++ V E L D + LA P++ C GLHPVQ G S+ EEV MV + I +GE+GLDF P VL ++ E K QR F+ Q A L LAVN+HSRSAGHHA+ ++ + + AV HA+DGKA A + GY S+PP+++RSP Q +A VPLS L LETDSPAL E G N PS + + A E+ARIK + V+EV+ TS NA +LFP +
Sbjct: 2 FDCHAHIY-PSQFPGRAITDILQEAKLAGVKGILSVPEKLSDVEEIQALALLNPIIKPCAGLHPVQVGAEGKVRSVLEEEVGPMVTKIRELNGRQKICAIGEIGLDFSPHVLASELNPRISAEELKEQQRRVFSAQLVVAKELSLAVNVHSRSAGHHAISLLEEHKIE--LAVLHAYDGKASSAKRGVDLGYYFSIPPSIIRSPQKQKLVAAVPLSNLLLETDSPALGPEKGVDNVPSNLIISAQEIARIKDISVDEVIRVTSENALKLFPSL 271
BLAST of mRNA_S-firma_F_contig10901.1203.1 vs. uniprot
Match: A0A383WPV6_TETOB (Uncharacterized protein n=1 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383WPV6_TETOB) HSP 1 Score: 189 bits (480), Expect = 2.830e-55 Identity = 123/278 (44.24%), Postives = 161/278 (57.91%), Query Frame = 1
Query: 34 IDCHAHLTDPALRPTHAVLQEAAA--AGVAGVVCVSETLDDAAAVLELAKAQPLVHACVGLHPVQP--------------GDVSLTPEEVPAMVALMETAAAAGTIVGVGEVGLDFRPRVLGA----DPEAAKAGQRAAFAMQCEAANRLGLAVNIHSRSAGHHALKVVVDAGVPPGRAVFHAFDGKAKYAVAVAEAGYLLSVPPNVVRSPGMQAWIARVPLSALCLETDSPALAAEAGAVNTPSQVAVGAMEVARIKGVPVEEVVEATSANARRLFP 807
IDCH+H P AAA AGV +V V E+L D AVL+LA+ +P+V AC GLHPVQP DVS EV ++A + A+ +V VGEVGLDF P V+G + + + QR F Q + AN LGL VN+HSRSAGH+A+ +++ G A+ HAFDGK +A+ A AG+ SVPP++VRSP Q + +PL L LETD+PAL + G+VN P+ + V EVA+IKGV EEV T+ NA LFP
Sbjct: 3 IDCHSHFYTPQFSRADIPGLAAAARHAGVQAIVTVPESLQDCEAVLQLAREEPIVQACAGLHPVQPIHADGQFYSSCRSVQDVS----EVSPVLAFIRKHAS--ELVAVGEVGLDFSPHVVGKVHSEEEQRLRDVQREVFKQQIQLANELGLPVNVHSRSAGHYAIDTLIECNA--GGALLHAFDGKLGHALRGAAAGFYFSVPPSIVRSPQKQKLVKGLPLDRLVLETDAPALGPDKGSVNVPANITVSCAEVAKIKGVSAEEVAAVTTNNALTLFP 272
BLAST of mRNA_S-firma_F_contig10901.1203.1 vs. uniprot
Match: A0A6H5KIS3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIS3_9PHAE) HSP 1 Score: 188 bits (478), Expect = 1.640e-54 Identity = 133/300 (44.33%), Postives = 168/300 (56.00%), Query Frame = 1
Query: 34 IDCHAHLTDPALRP-THAVLQEAAAAGVAGVVCVSETLDDAAAVLEL--------AKAQPL-VHACVGLHPVQPGDVSLTPEEVPAMVALMETAAAAGTIVGVGEVGLDFRPRVLGAD----PEAAKAGQRAAFAMQCEAANRLGLAVNIHSRSAGHHALKVVVDAGVPPGRAVFHAFDGKAK----------------------------YAVAVAEAGYLLSVPPNVVRSPGMQAWIARVPLSALCLETDSPALAAEAGAVNTPSQVAVGAMEVARIKGVPVEEVVEATSANARRLFP 807
DCHAHLTD +L H L EA AAGV G+V VSE+LDDA V+EL ++ + L +H +G+HP + DV +V ++ L++ A TIV VGEVGLDF ++G E AK QR F Q A LGLAVN+HSRSAGHHA+ ++ + G+ RAV HAFDGK K YAV A+AGY SVPP V RS G Q+ + +PL +L LETDSPAL E G N P ++V +A +KGVP + V E T+ANARRLFP
Sbjct: 47 FDCHAHLTDSSLAEGLHQTLLEAEAAGVTGIVAVSESLDDATPVVELCASINDDASRCRKLRLHPSIGMHP-EKADV----HKVDDVLELIDKHA--DTIVCVGEVGLDFSRHLIGESGGERAERAKEVQREVFRRQARRAKELGLAVNVHSRSAGHHAISLLQEEGIT--RAVLHAFDGKPKDNGLITAEIQQTFRVQEYLATAGGEKERYAVQAAKAGYFFSVPPIVCRSSGFQSLVKALPLESLVLETDSPALGPEKGVGNVPGNLSVSRDWIASLKGVPADVVAETTTANARRLFP 337
BLAST of mRNA_S-firma_F_contig10901.1203.1 vs. uniprot
Match: A0A2V0PG66_9CHLO (Uncharacterized protein n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0PG66_9CHLO) HSP 1 Score: 186 bits (472), Expect = 5.000e-54 Identity = 131/295 (44.41%), Postives = 163/295 (55.25%), Query Frame = 1
Query: 10 APPPPQGPI-DCHAHLTDPALRPTH--AVLQEAAAAGVAGVVCVSETLDDAAAVLELAKAQPLVHACVGLHPVQPGDVSLTP------------------------EEVPAMVALMETAAAAGTIVGVGEVGLDFRPRVLGADPEAAKAGQRAAFAMQCEAANRLGLAVNIHSRSAGHHALKVVVDAGVPPGRAVFHAFDGKAKYAVAVAEAG--YLLSVPPNVVRSPGMQAWIARVPLSALCLETDSPALAAEAGAVNTPSQVAVGAMEVARIKGVPVEEVVEATSANARRLFP 807
A P P GPI DCH HL P + +L EA AAGV +V V ETL DA AVL LA PL GLHPVQP TP E PA+ + A A +V VGEVGLDF P VL D E+ + QRAAF+ Q A+ LGL +N+HSRSAGHHA++++++ V G + HAFDG+A +A+ + + SV P+V RSP Q +A +PL L LETD+PAL G N P+ +A+ E+ARIKGV V E ATS NA RLFP
Sbjct: 2 ASPLPGGPIFDCHCHLYAPQFEASSIPGLLAEARAAGVGAIVTVPETLADARAVLALASTNPLTAPRAGLHPVQPAAAPHTPGAGAEGGGLXXXXXXGGVRSVRFDEVAPALDFIR---AHAHELVAVGEVGLDFSPHVLAGD-ESQRDAQRAAFSAQIALASELGLPLNVHSRSAGHHAIELLLEHQVQQG-VLLHAFDGRAAHALRAVDRSPAFFFSVAPSVARSPQQQKLVAALPLDRLVLETDAPALGPVKGEPNRPANIAIALSELARIKGVAVSEAARATSENALRLFP 291
BLAST of mRNA_S-firma_F_contig10901.1203.1 vs. uniprot
Match: A0A507E947_9FUNG (Uncharacterized protein n=1 Tax=Powellomyces hirtus TaxID=109895 RepID=A0A507E947_9FUNG) HSP 1 Score: 184 bits (468), Expect = 1.340e-53 Identity = 112/263 (42.59%), Postives = 159/263 (60.46%), Query Frame = 1
Query: 34 IDCHAHLTDPALRPTHAVLQEAAAAGVAGVVCVSETLDDAAAVLELAKAQPLVHACVGLHPVQPG---DVSLTPEEVPAMVALMETAAAAGTIVGVGEVGLDFRPRVL-GAD--PEAAKAGQRAAFAMQCEAANRLGLAVNIHSRSAGHHALKVVVDAGVPPGRAVFHAFDGKAKYAVAVAEAGYLLSVPPNVVRSPGMQAWIARVPLSALCLETDSPALAAEAGAVNTPSQVAVGAMEVARIKGVPVEEVVEATSANARRLF 804
+DCHAH+ P L+ A AAGV ++ VSET++DA +LELA+ P++ C+GLHPVQPG S+ +EV ++ L+ + IV +GE GLDF P VL G+D P A K Q+ F Q AN +G+ VN+HSR AGH+A+ ++++AG + + HAFDGK +A+ G L+S+ P+VVRSP +Q +PL L LETDSPAL G N P+ V + VA+IKG+ E+V T+ NA ++F
Sbjct: 29 LDCHAHIYSPEFSDVQQTLEAAYAAGVRAILNVSETVEDALKILELAQEYPILQPCLGLHPVQPGAQGSRSVRLDEVDKIMELIRENSE--RIVAIGECGLDFSPHVLAGSDVPPAAQKEIQKKVFGAQLCVANEIGVPVNVHSRQAGHYAVDLMIEAG---SKGLLHAFDGKVGHALKAVHNGCLISIAPSVVRSPHLQKLAKAIPLDHLVLETDSPALGPANGVQNVPANVRIACEHVAKIKGMSFEDVEAMTTENAMKMF 286
BLAST of mRNA_S-firma_F_contig10901.1203.1 vs. uniprot
Match: A0A0L0HTJ8_SPIPD (TatD family hydrolase n=2 Tax=Spizellomyces TaxID=4815 RepID=A0A0L0HTJ8_SPIPD) HSP 1 Score: 180 bits (456), Expect = 4.790e-52 Identity = 115/270 (42.59%), Postives = 157/270 (58.15%), Query Frame = 1
Query: 34 IDCHAHLTDPALRPT--HAVLQEAAAAGVAGVVCVSETLDDAAAVLELAKAQPLVHACVGLHPVQPG----DVSLTPEEVPAMVALMETAAAAGTIVGVGEVGLDFRPRVLGADPE----AAKAGQRAAFAMQCEAANRLGLAVNIHSRSAGHHALKVVVDAGVPPGRAVFHAFDGKAKYAVAVAEAGYLLSVPPNVVRSPGMQAWIARVPLSALCLETDSPALAAEAGAVNTPSQVAVGAMEVARIKGVPVEEVVEATSANARRLFPGV 813
IDCHAHL P H+VLQ A AGV ++ V ETL+DA VLELA ++ CVGLHPVQP S+ +EV ++ L++ + IV +GE GLDF P V P A + Q+ FA Q A L + +N+HSR AGH+A+ ++V+AGV + HAFDGK A+ + G +LSV ++ R+P +Q + +PL AL LETD+PALA E G N P+ + + +A IK V V+ V E T+ NARRLFP +
Sbjct: 3 IDCHAHLYPPQFPSDTLHSVLQRAETAGVTSIINVPETLEDAKIVLELAATHKILQPCVGLHPVQPSANGNPRSVRADEVQPVLDLIQRYS--DRIVAIGECGLDFSPHVFRTIPSGDIPAQRDAQKQVFAAQIRLAKELNIPLNVHSRQAGHYAVDMMVEAGVT---GLLHAFDGKVGSALKAVQNGCMLSVAAHIGRNPHLQKLVKALPLDALVLETDAPALAPEPGMQNVPANITIACETLANIKEVTVDMVQEVTTYNARRLFPRI 267
BLAST of mRNA_S-firma_F_contig10901.1203.1 vs. uniprot
Match: A0A4P9W3M4_9FUNG (Uncharacterized protein n=1 Tax=Blyttiomyces helicus TaxID=388810 RepID=A0A4P9W3M4_9FUNG) HSP 1 Score: 179 bits (455), Expect = 5.870e-52 Identity = 117/266 (43.98%), Postives = 154/266 (57.89%), Query Frame = 1
Query: 34 IDCHAHLTDPALRPTH--AVLQEAAAAGVAGVVCVSETLDDAAAVLELAKAQPLVHACVGLHPVQPGDVSLTPEEVPAMVALMETAAAAGTIVGVGEVGLDFRPRVLGADPEAAKAGQR----AAFAMQCEAANRLGLAVNIHSRSAGHHALKVVVDAGVPPGRAVFHAFDGKAKYAVAVAEAGYLLSVPPNVVRSPGMQAWIARVPLSALCLETDSPALAAEAGAVNTPSQVAVGAMEVARIKGVPVEEVVEATSANARRLFPGV 813
+D HAH+ P + A+L A GV +V V E+L D V L+ P++ GLHPVQ G S+ EEV ++ + IV VGE GLD+ P V A PE ++A QR A F Q A L L VN+HSRSAGHHA+ ++ P AV HAFDG+A +AV A++G LSVP ++VR P ++ W+A VPL +L LETDSPAL AE G + P+ V + A E+A IKGV + V T NAR+LFPG+
Sbjct: 3 VDVHAHVYPPNFPDSSLPALLATARDRGVVAIVNVPESLRDCETVFALSHRFPMLRPAAGLHPVQ-GGRSVVKEEVGPVLEFVRQHV--DEIVAVGECGLDYSPHVFRATPEVSEADQREEQLAVFRAQLSLAAELNLPVNVHSRSAGHHAITEILS--YPNLPAVLHAFDGRAAHAVRAAQSGLHLSVPSSIVRDPTIRKWVAAVPLDSLLLETDSPALPAERGGASQPADVDIAAREIAAIKGVGFDIVAAITGENARKLFPGI 263
BLAST of mRNA_S-firma_F_contig10901.1203.1 vs. uniprot
Match: A0A7K6BGV2_UPUEP (YNF8 Deoxyribonuclease (Fragment) n=1 Tax=Upupa epops TaxID=57439 RepID=A0A7K6BGV2_UPUEP) HSP 1 Score: 179 bits (453), Expect = 1.200e-51 Identity = 111/266 (41.73%), Postives = 159/266 (59.77%), Query Frame = 1
Query: 28 GPIDCHAHLTDPALRP-THAVLQEAAAAGVAGVVCVSETLDDAAAVLELAKAQP-LVHACVGLHPVQPGDV----SLTPEEVPAMVALMETAAAAGTIVGVGEVGLDFRPRVLGADPEAAKAGQRAAFAMQCEAANRLGLAVNIHSRSAGHHALKVVVDAGVPPGRAVFHAFDGKAKYAVAVAEAGYLLSVPPNVVRSPGMQAWIARVPLSALCLETDSPALAAEAGAVNTPSQVAVGAMEVARIKGVPVEEVVEATSANARRLFP 807
G +DCH HL P +P AV+Q A A V+G+V VSE + +VLEL++ P V C+G+HPVQ G S+T +++ A + L+E +VG+GEVGLDF PR D + K QR Q E A RL L +N+HSRSAG + ++ + G + + HAFDGK A+ +AGY S+PP+++RS Q + +PL ++CLE+DSPAL E N P + + A +A+IKG+PV+EVVE T+ NA ++FP
Sbjct: 2 GLVDCHCHLAAPCFQPDVAAVVQAAEQAAVSGLVVVSEQAAEFGSVLELSERFPRFVWPCLGVHPVQEGSPEGQRSVTVQDLDAALPLIERYK--DKLVGIGEVGLDFTPRFASTDEQ--KEEQRQVLIKQIEIARRLDLPLNVHSRSAGRPTINLLKEQGAT--KVLLHAFDGKPSVAMEGVKAGYYFSIPPSIIRSQQKQKLVKLLPLESMCLESDSPALGPEKQVRNEPKNIYIAAEYIAKIKGIPVQEVVEVTTRNALKVFP 261
BLAST of mRNA_S-firma_F_contig10901.1203.1 vs. uniprot
Match: A0A7K4YI79_BUCAB (YNF8 Deoxyribonuclease (Fragment) n=11 Tax=Neognathae TaxID=8825 RepID=A0A7K4YI79_BUCAB) HSP 1 Score: 177 bits (449), Expect = 4.930e-51 Identity = 111/266 (41.73%), Postives = 160/266 (60.15%), Query Frame = 1
Query: 28 GPIDCHAHLTDPALRP-THAVLQEAAAAGVAGVVCVSETLDDAAAVLELAKAQP-LVHACVGLHPVQ---PGDV-SLTPEEVPAMVALMETAAAAGTIVGVGEVGLDFRPRVLGADPEAAKAGQRAAFAMQCEAANRLGLAVNIHSRSAGHHALKVVVDAGVPPGRAVFHAFDGKAKYAVAVAEAGYLLSVPPNVVRSPGMQAWIARVPLSALCLETDSPALAAEAGAVNTPSQVAVGAMEVARIKGVPVEEVVEATSANARRLFP 807
GP+DCH HLT P + AV++ A A V+ +V VSE + +VL L++ P V C+G+HPVQ P + S+T +++ A + L+E +VG+GEVGLDF PR D + K GQR Q E A RL L +N+HSRSAG + ++ + G + + HAFDGK A+ +AGY S+PP+++RS Q + +PL ++CLETDSPAL E N P + + A +A+IKG+PVEEV+E T+ NA ++FP
Sbjct: 3 GPVDCHCHLTAPCFQTDVAAVVRAAEQAAVSALVVVSEQAGEFRSVLALSERFPGFVLPCLGVHPVQEVSPEEQRSVTVKDLDAALPLIELYK--DKLVGIGEVGLDFTPRFASTDEQ--KEGQRQVLIKQIELARRLDLPLNVHSRSAGRPTINLLKEQGA--SKVLLHAFDGKPSVAMEGVKAGYFFSIPPSIIRSEQKQKLVKLLPLESMCLETDSPALGPEKQVRNEPKNIYIAAEYIAKIKGIPVEEVIEVTTQNALKVFP 262 The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10901.1203.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-firma_F_contig10901.1203.1 >prot_S-firma_F_contig10901.1203.1 ID=prot_S-firma_F_contig10901.1203.1|Name=mRNA_S-firma_F_contig10901.1203.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=272bp MADAPPPPQGPIDCHAHLTDPALRPTHAVLQEAAAAGVAGVVCVSETLDDback to top mRNA from alignment at S-firma_F_contig10901:204..1019+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-firma_F_contig10901.1203.1 ID=mRNA_S-firma_F_contig10901.1203.1|Name=mRNA_S-firma_F_contig10901.1203.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=816bp|location=Sequence derived from alignment at S-firma_F_contig10901:204..1019+ (Sphaerotrichia firma ET2_F female)back to top Coding sequence (CDS) from alignment at S-firma_F_contig10901:204..1019+ >mRNA_S-firma_F_contig10901.1203.1 ID=mRNA_S-firma_F_contig10901.1203.1|Name=mRNA_S-firma_F_contig10901.1203.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=1632bp|location=Sequence derived from alignment at S-firma_F_contig10901:204..1019+ (Sphaerotrichia firma ET2_F female)back to top |