mRNA_S-firma_F_contig109.1194.1 (mRNA) Sphaerotrichia firma ET2_F female
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Overview
Homology
BLAST of mRNA_S-firma_F_contig109.1194.1 vs. uniprot
Match: A0A6H5JP76_9PHAE (Bromo domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JP76_9PHAE) HSP 1 Score: 343 bits (879), Expect = 2.250e-111 Identity = 192/299 (64.21%), Postives = 226/299 (75.59%), Query Frame = 1
Query: 187 GVDLMDRHQLNRYESESRRTLKKGFSHFLSPRLQALVKEKPRVALSEKAEFGELLADEPSASPWPIQELSVELLRRSFLIRKRVAVAGVAAN-ADEGEEGPPVPPDVPMANQTTNKFSPAYAKKQ---AKQATKRPRPSADDDE---EGAGGEFAFASATTP-PLDLKSTVKPLISKLVAMKWP-GWSNPFMTVFKKSNAPPGYFEFIKRPMNLTFIRDNLNKNKYTSVAEIEADLELVVSNALTFNRPHDPVHQFALELQAAFRSELPQVKRTLQDLSQQAAAAGSIGGQVDKKPRIR 1056
GVD+MDRHQL+RY++ESRRTL+KG SHFLSP+LQ L+KEKPR+AL+EKA F ELL++E S I+ELS++L+RRSF+IRKRVA A A VPPD+P A QTTNK SPA+A+K AKQA KR RPS+D+ E A G + ASA P + KS VKPLIS+LVAMKWP GW NPF TVFKKSNAPP YFEFIKRPMNLTFIRDNLNKNKYT+VAE+EADLEL+V+NAL FNRP DPV+QFAL+LQ AFR EL +KR L+DL+QQ G DKK R+R
Sbjct: 10 GVDIMDRHQLHRYDAESRRTLRKGISHFLSPQLQVLIKEKPRIALAEKAYFAELLSEERSGRR--IEELSMDLMRRSFMIRKRVAPGSAAGGLAXXXXXXXXVPPDMPAALQTTNKLSPAFARKAKQVAKQAMKRQRPSSDNGEGEMASASGYSSSASAAAPLSQEAKSLVKPLISRLVAMKWPSGWGNPFTTVFKKSNAPPRYFEFIKRPMNLTFIRDNLNKNKYTTVAEVEADLELIVTNALAFNRPSDPVYQFALQLQEAFRRELSVIKRNLEDLAQQRGGVSGSEGVQDKKQRVR 306
BLAST of mRNA_S-firma_F_contig109.1194.1 vs. uniprot
Match: A0A836CA18_9STRA (Bromodomain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CA18_9STRA) HSP 1 Score: 117 bits (293), Expect = 8.930e-26 Identity = 104/293 (35.49%), Postives = 138/293 (47.10%), Query Frame = 1
Query: 133 VHLVTQAAELAALTEPTAGV-DLMDRHQLNRYESESRRTLKK---GFSHFLSPRLQALVKEKPRVALSEKAEFGELLADEPSASPWPIQEL--SVELLRRSFLIRKRVAVAGVAANADEGEEGPPVPPDV--PMANQTTNKFSPAYAKKQAKQATKRPRPSADDDEEGAGGEFAFASATTPPLDLKSTVKPLISKLVAMKW-PGWSNPFMTVFKKSNAP----PGYFEFIKRPMNLTFIRDNLNKNKYTSVAEIEADLELVVSNALTFNRPHDPVHQFALELQAAFRSELPQV 972
+HL+T AELAA EPTA DL L +E + R +HFL P L L++ K RV +EKA F ELLA EP A P P +++ + +RRSF IR+R E G P P V M TT P A++ +RP A + P D+ + PL +L M + W NPF V A P YF F+K PMNLT++RD L +Y ++A+ AD+ LV +NA +NRP DPV+ FA L EL Q+
Sbjct: 24 LHLITPEAELAAAEEPTANAADLPALASLAHFEKQLRAMPLPHPIDMAHFLPPALLPLLRAKWRVVQAEKANFAELLASEPPA-PQPRKKVPFTEAAMRRSFFIRRR-------------EGGAPSPATVGGSMPFPTTG-GRPITARR-----LRRP---------------ARITGEMTPDDVSDALTPLHQRLTRMSFGKAWGNPFTQVITPETAAALRVPNYFNFVKEPMNLTWMRDKLRGAEYAAIADYVADIALVRANAQRYNRPGDPVYGFADTLYDVCAQELAQL 281
BLAST of mRNA_S-firma_F_contig109.1194.1 vs. uniprot
Match: A0A3F2RFR5_9STRA (Bromo domain-containing protein n=2 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RFR5_9STRA) HSP 1 Score: 93.6 bits (231), Expect = 1.780e-17 Identity = 43/124 (34.68%), Postives = 75/124 (60.48%), Query Frame = 1
Query: 661 LKSTVKPLISKLVAMKWPGW------SNPFMTVFKKSNAP----PGYFEFIKRPMNLTFIRDNLNKNKYTSVAEIEADLELVVSNALTFNRPHDPVHQFALELQAAFRSELPQVKRTLQDLSQQ 1002
L+ + PL+++L + W GW NPF+ F K N P YF+++K PM+LT +++ + + +Y+ + + D++L+ +NA TFNR +PVHQ A+E++ + S+LP K+ DL Q+
Sbjct: 151 LQKLLAPLVTELRGLTWAGWVVSGKPGNPFLQKFTKDNCKRLGVPNYFDYVKNPMDLTRMKEKVERAEYSKIDQFTTDIKLMAANAKTFNRVGEPVHQMAIEIEQLYESKLPGYKKMFDDLQQE 274
BLAST of mRNA_S-firma_F_contig109.1194.1 vs. uniprot
Match: K3X1N2_GLOUD (Bromo domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X1N2_GLOUD) HSP 1 Score: 92.0 bits (227), Expect = 7.930e-17 Identity = 46/124 (37.10%), Postives = 75/124 (60.48%), Query Frame = 1
Query: 661 LKSTVKPLISKLVAMKWPGW------SNPFMTVFKKSNAP----PGYFEFIKRPMNLTFIRDNLNKNKYTSVAEIEADLELVVSNALTFNRPHDPVHQFALELQAAFRSELPQVKRTLQDLSQQ 1002
L+ + PL+++L + W GW NPF+ + N P YF+F+K PM+LT +++ + K +Y + + +D++L+V+NA TFNR +PVHQ A+EL+ + S+L K TL DL Q+
Sbjct: 169 LQKLLAPLVTELRGLTWVGWIVNGKAGNPFIQKITRENCKRLGVPNYFDFVKEPMDLTRMKEKVEKAEYVRIDQFTSDIKLMVANAKTFNRVGEPVHQMAIELEQLYVSKLAGYKTTLDDLQQE 292
BLAST of mRNA_S-firma_F_contig109.1194.1 vs. uniprot
Match: M4BEQ4_HYAAE (Bromo domain-containing protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BEQ4_HYAAE) HSP 1 Score: 90.1 bits (222), Expect = 2.340e-16 Identity = 42/124 (33.87%), Postives = 74/124 (59.68%), Query Frame = 1
Query: 661 LKSTVKPLISKLVAMKWPGW------SNPFMTVFKKSNAP----PGYFEFIKRPMNLTFIRDNLNKNKYTSVAEIEADLELVVSNALTFNRPHDPVHQFALELQAAFRSELPQVKRTLQDLSQQ 1002
L+ + PL+++L A+ W GW NPF+ F K N P YF+++K PM+LT +++ + + +YT + + D++L+ +NA FNR +PVHQ A+E++ + S+L K+ +L Q+
Sbjct: 142 LQKLLAPLVAELRALTWAGWVVSGKAGNPFLQKFTKDNCKRLGVPNYFDYVKTPMDLTRMKEKVERAEYTKIEQFTTDIKLMAANAKAFNRVGEPVHQMAIEIERLYESKLSAYKKMFDELHQE 265
BLAST of mRNA_S-firma_F_contig109.1194.1 vs. uniprot
Match: A0A5D6YD80_9STRA (Bromo domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YD80_9STRA) HSP 1 Score: 90.1 bits (222), Expect = 3.460e-16 Identity = 44/124 (35.48%), Postives = 77/124 (62.10%), Query Frame = 1
Query: 661 LKSTVKPLISKLVAMKWPGW------SNPFMTVFKKSNAP----PGYFEFIKRPMNLTFIRDNLNKNKYTSVAEIEADLELVVSNALTFNRPHDPVHQFALELQAAFRSELPQVKRTLQDLSQQ 1002
L++ + PL+++L + W GW +NPF+ + N P YF+++K PM+LT +++ + K +Y V + +D++L+V+NA TFNR +PV Q A+EL+ + S+L + TL+DL Q+
Sbjct: 167 LQTLLAPLVTELRGLTWAGWIVSGKAANPFIQKITRENCKRLGVPNYFDYVKEPMDLTRMKEKVEKAEYARVEQFTSDIKLMVANAKTFNREGEPVFQMAIELEQLYESKLVGYRATLEDLQQE 290
BLAST of mRNA_S-firma_F_contig109.1194.1 vs. uniprot
Match: A0A8K1CEI2_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CEI2_PYTOL) HSP 1 Score: 86.3 bits (212), Expect = 7.210e-15 Identity = 44/124 (35.48%), Postives = 73/124 (58.87%), Query Frame = 1
Query: 661 LKSTVKPLISKLVAMKWPGW------SNPFMTVFKKSNAP----PGYFEFIKRPMNLTFIRDNLNKNKYTSVAEIEADLELVVSNALTFNRPHDPVHQFALELQAAFRSELPQVKRTLQDLSQQ 1002
L+ + PLI++L ++ W GW NPF+ K N P YF+F++ PM+LT I++ + K +Y+ + + D++L+V NA TFNR +PVHQ A EL+ + S++ T ++L Q+
Sbjct: 169 LQKVLAPLITELRSLTWSGWIVSGKPGNPFIQKITKDNCRRLGVPNYFDFVREPMDLTRIKEKVEKAEYSRIDQFTVDIKLMVHNAKTFNRVGEPVHQMAGELEQLYESKVVAYGATFEELQQE 292
BLAST of mRNA_S-firma_F_contig109.1194.1 vs. uniprot
Match: A0A2D4BWE1_PYTIN (Bromo domain-containing protein n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BWE1_PYTIN) HSP 1 Score: 85.1 bits (209), Expect = 1.740e-14 Identity = 42/124 (33.87%), Postives = 71/124 (57.26%), Query Frame = 1
Query: 661 LKSTVKPLISKLVAMKWPGW------SNPFMTVFKKSNAP----PGYFEFIKRPMNLTFIRDNLNKNKYTSVAEIEADLELVVSNALTFNRPHDPVHQFALELQAAFRSELPQVKRTLQDLSQQ 1002
L+ + PLI++L + W W NPF+ K N P YF+F+ PM+LT +++ + K +Y S+ + +D++L+V NA TFNR +PVHQ A+EL+ + +++ T +L Q+
Sbjct: 168 LQKVLVPLIAELRGLTWSAWIVSGKPGNPFLQKITKENCRRLGVPNYFDFVAEPMDLTRVKEKVEKAEYYSIQQFTSDIKLMVQNAKTFNRVGEPVHQMAIELEQLYEAKVVSYAATFDELQQE 291
BLAST of mRNA_S-firma_F_contig109.1194.1 vs. uniprot
Match: A0A7S2V5Q0_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V5Q0_9STRA) HSP 1 Score: 84.3 bits (207), Expect = 5.140e-14 Identity = 45/124 (36.29%), Postives = 74/124 (59.68%), Query Frame = 1
Query: 637 SATTPPLD-LKSTVKPLISKLVAMKWPG-WSNPFMTVFKKSNAPP----GYFEFIKRPMNLTFIRDNLNKNKYTSVAEIEADLELVVSNALTFNRPHDPVHQFALELQAAFRSELPQVKRTLQD 990
SA P D ++ ++P+++ L M + G W NPF TV + N YF+FI+RPMNLT+I++ +N KY+S+ E+ D+EL+V NA +NRP++ V+ FA L+ + + + + D
Sbjct: 217 SAPLPRADQVQKVLRPVVNSLWKMNFGGQWGNPFRTVIDQENCVALGVANYFDFIERPMNLTWIKEKMNSKKYSSLGELTDDVELMVQNAHKYNRPNEEVYIFATTLREKYYKIISSISEQVLD 340
BLAST of mRNA_S-firma_F_contig109.1194.1 vs. uniprot
Match: A0A7S3YJB1_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YJB1_HETAK) HSP 1 Score: 79.7 bits (195), Expect = 1.190e-13 Identity = 40/127 (31.50%), Postives = 71/127 (55.91%), Query Frame = 1
Query: 613 AGGEFAFASATTPPLDL------KSTVKPLISKLVAMKWPGWSNPFMTVFKKSNAP----PGYFEFIKRPMNLTFIRDNLNKNKYTSVAEIEADLELVVSNALTFNRPHDPVHQFALELQAAFRSEL 963
AG E + + A P L + +KP+ L+A +W W NPF V + N P YF+ I+ PMNL +I+ ++K+KY + + +AD++L++ NA+T+NR +PV A ++ ++ ++
Sbjct: 19 AGAEASTSGAGRPLLSFYRFWLHQGVLKPITEILLAKEWKKWGNPFTAVITRENCHKMDVPDYFDVIQTPMNLKWIKAKVDKHKYLTFQQFDADIDLMLENAMTYNREGEPVFAMAKVIRDVYKQKV 145 The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig109.1194.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-firma_F_contig109.1194.1 >prot_S-firma_F_contig109.1194.1 ID=prot_S-firma_F_contig109.1194.1|Name=mRNA_S-firma_F_contig109.1194.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=326bp MAALDRGHPDGDKSGAAVHLVTQAAELAALTEPTAGVDLMDRHQLNRYESback to top mRNA from alignment at S-firma_F_contig109:14787..16913- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-firma_F_contig109.1194.1 ID=mRNA_S-firma_F_contig109.1194.1|Name=mRNA_S-firma_F_contig109.1194.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=2127bp|location=Sequence derived from alignment at S-firma_F_contig109:14787..16913- (Sphaerotrichia firma ET2_F female)back to top Coding sequence (CDS) from alignment at S-firma_F_contig109:14787..16913- >mRNA_S-firma_F_contig109.1194.1 ID=mRNA_S-firma_F_contig109.1194.1|Name=mRNA_S-firma_F_contig109.1194.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=1956bp|location=Sequence derived from alignment at S-firma_F_contig109:14787..16913- (Sphaerotrichia firma ET2_F female)back to top |