mRNA_S-firma_F_contig109.1191.1 (mRNA) Sphaerotrichia firma ET2_F female
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Overview
Homology
BLAST of mRNA_S-firma_F_contig109.1191.1 vs. uniprot
Match: D7FUU5_ECTSI (Matrin-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FUU5_ECTSI) HSP 1 Score: 818 bits (2113), Expect = 8.600e-296 Identity = 434/492 (88.21%), Postives = 445/492 (90.45%), Query Frame = 2
Query: 32 MSSSLLERARGFHEDLEIYERAIIEQLENKPRTQKERVAQQHRIANLCDGSTERSLGLHDIYEDKDGSMREEVASMRGQKVMDNFYDRLKETWSYHTHHPGLPVTFGPNVEAETEVKVQFSGEELYGKFFDLHDMFVRWVNLPQCKDKQLDYSQFLQALGRFQDIPEQEKLRGKAYAGFLADLREYLGGFLTRTQPLVDLNEVLGDTDSSFEEAWEAGTLPGWTSGRAATAAAGDAGKS---AAAPRVLDLKKFHDADELRALGMDRLKEGLEALGLKCGGTLEQRADRLFSVKGKKPEDIDPKLKAKGKKGGKXXXXXVXXXXXXXXXXXXXXXXXXXXX--KEERRKQLAALETKVKALLEVQTDTLDATKRQVDKKQTRTVEERDQEIQEEEQGALPEFNEEEDXXXXXEGPIYNPLNLPLGWDGKPIPYWLYKLHGLGVEFKCEICGDFSYKGRRNFDRHFQEWRHAHGMRCLGIPNTKHFHDIILIQ 1492
MSSSLLERARGFHEDLEIYER II+QLE KPRTQKERVAQQHRIANLCDGSTERS GLH+IYED DGSMREEVASMRGQKVMD FYDRLKETWSYHTHHPGLPVTFGPN+EAETEVKVQFSGEELYGKFFDLH MFVRWVNLPQCKDKQLDYSQFLQALGRF+DIPEQEKLRGKAYAGFLADLREYLGGFLTRTQPLVDL+EVLGDTDSSFEEAWEAGTLPGWTSGRAA AAAPRVLDLKKFHDADELRALGMDRLKE L+A+GLKCGGTLEQRADRLFSVKGKKPE+ID KLKAKGKK XXXXX XXXXXXX KEERRKQLAALETKVKALLEVQTDTL++TKRQVDKK TRTVEERDQEIQEEEQGALPEFNE XXX EGPIYNPLNLPLGWDGKPIPYWLYKLHGLGVEFKCEICGDFSYKGRRNFDRHFQEWRHAHGMRCLGIPNTKHFHDI+LIQ
Sbjct: 1 MSSSLLERARGFHEDLEIYERGIIDQLETKPRTQKERVAQQHRIANLCDGSTERSQGLHEIYEDTDGSMREEVASMRGQKVMDTFYDRLKETWSYHTHHPGLPVTFGPNLEAETEVKVQFSGEELYGKFFDLHGMFVRWVNLPQCKDKQLDYSQFLQALGRFEDIPEQEKLRGKAYAGFLADLREYLGGFLTRTQPLVDLDEVLGDTDSSFEEAWEAGTLPGWTSGRAAXXXXXXXXXXXXXAAAPRVLDLKKFHDADELRALGMDRLKEALQAIGLKCGGTLEQRADRLFSVKGKKPEEIDQKLKAKGKKEXXXXXXXXAPGHGADPNANGPAXXXXXXXXXKEERRKQLAALETKVKALLEVQTDTLESTKRQVDKKHTRTVEERDQEIQEEEQGALPEFNEXXXXXXDEEGPIYNPLNLPLGWDGKPIPYWLYKLHGLGVEFKCEICGDFSYKGRRNFDRHFQEWRHAHGMRCLGIPNTKHFHDIVLIQ 492
BLAST of mRNA_S-firma_F_contig109.1191.1 vs. uniprot
Match: A0A836CE40_9STRA (Matrin-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CE40_9STRA) HSP 1 Score: 553 bits (1426), Expect = 2.300e-191 Identity = 289/496 (58.27%), Postives = 348/496 (70.16%), Query Frame = 2
Query: 41 SLLERARGFHEDLEIYERAIIEQLENKPRTQKERVAQQHRIANLCDGSTERSLGLHDIYEDKDGSMREEVASMRGQKVMDNFYDRLKETWSYHTHHPGLPVTFGPNVEAETEVKVQFSGEELYGKFFDLHDMFVRWVNLPQCKDKQLDYSQFLQALGRFQDIPEQEKLRGKAYAGFLADLREYLGGFLTRTQPLVDLNEVLGDTDSSFEEAWEAGTLPGW--TSGRAATAAAGDAGKSAAAPRVLDLKKFHDADELRALGMDRLKEGLEALGLKCGGTLEQRADRLFSVKGKKPEDIDPKLKAKG---KKGGKXXXXXVXXXXXXXXXXXXXXXXXXXXXKE-------ERRKQLAALETKVKALLEVQTDTLDATKRQVDKKQTRTVEERDQEIQEEEQGALPEFNEEEDXXXXXEGPIYNPLNLPLGWDGKPIPYWLYKLHGLGVEFKCEICGDFSYKGRRNFDRHFQEWRHAHGMRCLGIPNTKHFHDIILIQ 1492
SLLERAR FHED+E YE AII++LE KP+T KERV QQHR+ANL + RS L IYEDKD SM++EVA+MRG+ + NFYDR K +WSYH +P LPV GPN++ E E KV FSGEEL+GK FDLHD++ RWVN PQC DK+LDY +L L D+PE+ K R K YAG++ADL YL GFL RTQPLVD +E++ + ++ F++AWEAG + GW S A AA G A R LDL +H A++L LG+DRLKE LEALGLKCGGTL+QRA+RL +VKGKKP +IDPKL AKG K+ G + R+ AA E +V+A LE +D +AT++QV+KKQTRTVEERD EI +EE G LPE + ++ +GPIYNPLNLPLGWDGKPIP+WLYKLHGLGVE+KCEICGDFSY GRR FDRHFQE+RHAHGMRCLGIPNTKHFHDI LIQ
Sbjct: 2 SLLERARAFHEDIETYEMAIIKELEAKPKTNKERVYQQHRVANLLSQAVARSKELDAIYEDKDDSMKQEVAAMRGRDALKNFYDRAKSSWSYHARYPDLPVNTGPNIDEEKEPKVTFSGEELFGKHFDLHDLYARWVNSPQCSDKRLDYGAYLAGLAALGDVPERAK-RSKGYAGYVADLEAYLRGFLARTQPLVDADEIVKEAEAEFDKAWEAGRVKGWPRVSKAAPHKAAAPGGGLTA--RHLDLSLYHAAEDLMPLGLDRLKEALEALGLKCGGTLQQRAERLMAVKGKKPSEIDPKLLAKGAGQKRNGPPSDGPAAKRQNGNGADAADASGAKTNGVPNGKSDGGDWRRSTAAAEARVRAFLEALSDVWEATRKQVEKKQTRTVEERDAEIADEEAGTLPEVGDADEEDSDDDGPIYNPLNLPLGWDGKPIPFWLYKLHGLGVEYKCEICGDFSYWGRRAFDRHFQEFRHAHGMRCLGIPNTKHFHDITLIQ 494
BLAST of mRNA_S-firma_F_contig109.1191.1 vs. uniprot
Match: A0A7S2W3N3_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W3N3_9STRA) HSP 1 Score: 418 bits (1074), Expect = 1.820e-138 Identity = 238/497 (47.89%), Postives = 313/497 (62.98%), Query Frame = 2
Query: 32 MSSSLLERARGFHEDLEIYERAIIEQLENKPRTQKERVAQQHRIANLCDGSTERSLGLHDIYEDKDGSMREEVASMRGQKVMDNFYDRLKETWSYHTHHPGLPVTFGPNVEAETEVKVQFSGEELYGKFFDLHDMFVRWVNLPQCKDKQLDYSQFLQALGRFQDIPEQEKLRGKAYAGFLADLREYLGGFLTRTQPLVDLNEVLGDTDSSFEEAWEAGTLPGWTSGRAATAAAGDAGKSAAAPRVLDLKKFHDADELRALGMDRLKEGLEALGLKCGGTLEQRADRLFSVKGKKPEDIDPKLKAKGKKGGKXXXXXVXXXXXXXXXXXXXXXXXXXXXKEERRKQLAALETKVKALLEVQTDTLDATKRQVDKKQTRTVEERDQEIQEEEQGALPE----------FNEEEDXXXXXEGPIYNPLNLPLGWDGKPIPYWLYKLHGLGVEFKCEICGDFSYKGRRNFDRHFQEWRHAHGMRCLGIPNTKHFHDIILIQ 1492
MSS+LLE+AR E E YE+AI EQL +KP+T K++V QQH IANL ++S ++ +D DGS +EE+ +M+G +FY+ LK+T Y+ P + ++EA+ E FSGEE++GK+ DLH + R N+ Q + Y +L A F +P K+ G AYA +L DL +YL F R QPLVD + + ++F+EAWE GT+PGW++G A T AA + + AA R +D+ H A +L ALG+ RLKEGLEALG+KCGG+L RA+RLFSVKG +DI L AK K K + + +A E V ++E D ++ATKR V+K+QT+ VEER E++EEE G + + ++EEDXXXX +GP+YNPLNLPLGWDGKPIP+WLYKLHGLGVE+KCEICG+ SY GRR FDRHFQEWRHAHGMRCLGIPNTKHFHDI LI+
Sbjct: 1 MSSTLLEQARQALEYSEAYEKAIGEQLSSKPKTTKQQVWQQHHIANLMTCIKKQSGTALEVVKDGDGSFKEELETMKGANAFGSFYESLKQTREYYMRFPNIKPQQALSLEADMECTTVFSGEEVFGKYLDLHALHERSCNMKQFGPTE--YLDYLAAFSDFSKVPSGAKM-GAAYAEYLKDLLDYLESFFQRAQPLVDFASISSERSTAFQEAWEKGTVPGWSAGSAGTEAASTS--NTAAKRPVDMSSMHSAQDLEALGLQRLKEGLEALGMKCGGSLSDRAERLFSVKGVAQKDIPKNLLAKAAKKRKRDAAETGG---------------------DNGRAVAEREFGVGFMVEQLLDVVEATKRHVEKRQTQLVEERAAELEEEEFGTMADQIAGEDGTGGLDDEEDXXXXDDGPLYNPLNLPLGWDGKPIPFWLYKLHGLGVEYKCEICGNQSYWGRRAFDRHFQEWRHAHGMRCLGIPNTKHFHDITLIE 471
BLAST of mRNA_S-firma_F_contig109.1191.1 vs. uniprot
Match: A0A4D9DC70_9STRA (Matrin-type domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DC70_9STRA) HSP 1 Score: 416 bits (1069), Expect = 2.430e-137 Identity = 250/508 (49.21%), Postives = 317/508 (62.40%), Query Frame = 2
Query: 32 MSSSLLERARGFHEDLEIYERAIIEQLENKPRTQKERVAQQHRIANLCDGSTERSLGLHDIYEDKDGSMREEVASMRGQKVMDNFYDRLKETWSYHTHHPGLPVTFGPNVEAETEVKVQFSGEELYGKFFDLHDMFVRWVNLPQCKDKQLDYSQFLQALGRFQDIPEQEKLRGKAYAGFLADLREYLGGFLTRTQPLVDLNEVL-GDTD-----------SSFEEAWEAGTLPGWTSGRAATAAAGDAGKSAAAPRVLDLKKFHDADELRALGMDRLKEGLEALGLKCGGTLEQRADRLFSVKGKKPEDIDPKLKA-KGKKGGKXXXXXVXXXXXXXXXXXXXXXXXXXXXKEERRKQLAALETKVKALL-EVQTDTLDATKRQVDKKQTRTVEERDQEIQEEEQGALPEFNEE-------EDXXXXXEGPIYNPLNLPLGWDGKPIPYWLYKLHGLGVEFKCEICGDFSYKGRRNFDRHFQEWRHAHGMRCLGIPNTKHFHDIILIQ 1492
MS LERAR HED+E YE AI+ LE+KPRT KERV QQHR++NL + RS L IYED G+M+EE+A++RG+ +FY R+ YH HP +PV P V+ E E +V FSGEE++GK+ DL + + LPQ + DY +L L F +P +K A+A ++ +L YL F+ RTQPL+++ E+L G+ D ++FE W+AG LPG G A G K + +DL+ F A EL +GMDRLK GL+ALG+KCGGTLE+RA RLF+ KGKK E+IDPKL A GKK K E+ +KQ A E ++ L+ EV + ++ATK+ V+KKQTRT EE + E+++EE+G LP E XXXXX GPIYNPLNLPLG+DGKPIPYWLYKLHGLGVE+KCEICG+ SY GRR FDRHFQEWRHAHGMRCL IPNTKHFHDI I+
Sbjct: 1 MSGLTLERARANHEDIEAYEAAIVAILEDKPRTAKERVWQQHRVSNLIEQIQGRSKDLEGIYEDLHGTMKEELATLRGRDAFPSFYARVDHAKEYHQKHPDVPVKHHPPVQDEAEPRVCFSGEEVFGKYLDLQASHMEFYALPQTP--KWDYQTYLSRLADFSVVPAGKK--NAAWARYVHNLYNYLLSFIQRTQPLLNVEEILDGNVDGGEEGATKKAEAAFEALWQAGKLPG---GWPVPAQGGGEEKGTENTKEVDLRGFRTAKELEVVGMDRLKAGLKALGMKCGGTLEERAARLFATKGKKKEEIDPKLLAGNGKKXSKAEGNGPTSNGNGQGVGTDKEGGKGG---EDAKKQCARWEFRIDLLVKEVLREVVEATKKFVEKKQTRTKEETETELRQEEEGLLPGLRGEGXXXXXXXXXXXXXXGPIYNPLNLPLGYDGKPIPYWLYKLHGLGVEYKCEICGNHSYWGRRAFDRHFQEWRHAHGMRCLKIPNTKHFHDITTIK 498
BLAST of mRNA_S-firma_F_contig109.1191.1 vs. uniprot
Match: A0A7S2HV93_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HV93_9STRA) HSP 1 Score: 391 bits (1005), Expect = 3.390e-128 Identity = 236/496 (47.58%), Postives = 302/496 (60.89%), Query Frame = 2
Query: 32 MSSSLLERARGFHEDLEIYERAIIEQLENKPRTQKERVAQQHRIANLCDGSTERSLGLHDIYEDKDGSMREEVASMRGQKVMDNFYDRLKETWSYHTHHPGLPVTFGPNVEAETEVKVQFSGEELYGKFFDLHDMFVRWVNLPQ-CKDKQLDYSQFLQALGRFQDIPEQEKLRGKAYAGFLADLREYLGGFLTRTQPLVDLNEVLGDTDSSFEEAW---EAGTLPGWTSGRAATAAAGDAGKSAAAPRVLDLKKFHDADELRALGMDRLKEGLEALGLKCGGTLEQRADRLFSVKGKKPEDIDPKLKA--KGKKGGKXXXXXVXXXXXXXXXXXXXXXXXXXXXKEERRKQLAALETKVKALLEVQTDTLDATKRQVDKKQTRTVEERDQEIQEEEQGALPEFNEEEDXXXXX---EGPIYNPLNLPLGWDGKPIPYWLYKLHGLGVEFKCEICGDFSYKGRRNFDRHFQEWRHAHGMRCLGIPNTKHFHDIILIQ 1492
MS+SLLE+AR +E+ E YER I +QL+ KP+T K+RV QQH I NL +S + I++D D + ++E+ SM+G+ +FY+ L+ET YH +P L N++AE E K QFSG EL+GK+ DL R N+ + + ++YSQFL F +P + K R +Y + DL YL F+ RTQPLV L E+ + D FE+AW EA + T +A+ G R+LDL KFH A E+ ALG+ RLK+G ALGLKCGG +RA+RL+ KG P+ K+ A K K+ GK + R +A E ++ L + D LDA +R VDKKQT+ VEERD E EEE GAL ++EE XXXXX EGP+YNPLNLPLGWDGKPIPYWLYKLHGLGVE+KCEICG+ SY GRR FDRHFQEWRHA+GMRCL IPNTKHFHDI LI+
Sbjct: 1 MSASLLEQARSSYENTEAYERTIGKQLDTKPKTNKQRVWQQHHIKNLIKHIQVQSKVVVAIHQDADETFKDELESMKGRNAFGSFYESLRETKEYHQRNPYLMPQNELNMDAEMECKAQFSGPELFGKYLDLVPFHARATNMKKHFGPEPVEYSQFLLDFHEFSKVPAELK-RAASYVSYTKDLCAYLMAFMARTQPLVSLEEMATEADEVFEKAWKDTEAEKVE--TENKASNYQEG---------RLLDLTKFHSAKEIEALGLARLKDGCLALGLKCGGGAGERAERLWRTKGLTPDQYPSKILASRKRKRDGKSDDKEA----------------------SDSRHDVARAEFRISFLCDQMADVLDAPRRYVDKKQTQLVEERDAEFAEEESGALAALDDEEXXXXXXXXDEGPLYNPLNLPLGWDGKPIPYWLYKLHGLGVEYKCEICGNMSYWGRRAFDRHFQEWRHAYGMRCLKIPNTKHFHDITLIE 462
BLAST of mRNA_S-firma_F_contig109.1191.1 vs. uniprot
Match: A0A812TNG2_SYMMI (SF3A3 protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812TNG2_SYMMI) HSP 1 Score: 355 bits (910), Expect = 1.880e-115 Identity = 190/384 (49.48%), Postives = 241/384 (62.76%), Query Frame = 2
Query: 341 VTFGPNVEAETEVKVQFSGEELYGKFFDLHDMFVRWVNLPQCKDKQLDYSQFLQALGRFQDIPEQEKLRGKAYAGFLADLREYLGGFLTRTQPLVDLNEVLGDTDSSFEEAWEAGTLPGWTSGRAATAAAGDAGKSAAAPRVLDLKKFHDADELRALGMDRLKEGLEALGLKCGGTLEQRADRLFSVKGKKPEDIDPKLKAKGKKGGKXXXXXVXXXXXXXXXXXXXXXXXXXXXKEERRKQLAALETKVKALLEVQTDTLDATKRQVDKKQTRTVEERDQEIQEEEQGALPEFNEEEDXXXXXEGPIYNPLNLPLGWDGKPIPYWLYKLHGLGVEFKCEICGDFSYKGRRNFDRHFQEWRHAHGMRCLGIPNTKHFHDIILIQ 1492
+ P E EV V FSGEE++GK+ DLH +V++ NLP +DY Q+L F IPE K KAY +++ L EYL F R QPLV++ ++L + ++FE+ W G + GW R + GD+ + L L F+ DEL ALG+DRLK +EALGLKCGGTL RADRL+SV+G KP DI KLKAK K+ G + RK+ A LE +++L + + + AT+R +K+QTRT+EE+ ++EEE G LP+ EE D EGP+YNPLNLPLGWDGKPIP+WLYKLHGLGVEFKCEICG+ SY GRR FDRHFQEWRHAHGMRCLG+PNTKHFHDI LI+
Sbjct: 1 MDINPEESMEVEVHVAFSGEEIFGKYLDLHSFYVQYCNLPNIPSHDVDYLQYLDKFNSFFYIPENSKSH-KAYVQYISSLWEYLLDFFRRVQPLVEVEDLLAEWRAAFEKKWSVGDVSGWAPPR--KSGGGDS-------QALRLGMFNSKDELEALGLDRLKGAMEALGLKCGGTLSDRADRLWSVRGVKPNDIPDKLKAKAKRAGSADNSG-----------------------DSARKKTALLEYLIQSLCSLMAEIVTATRRHAEKQQTRTLEEKLALLEEEEYGTLPDV-EEADDDEDDEGPLYNPLNLPLGWDGKPIPFWLYKLHGLGVEFKCEICGNQSYWGRRAFDRHFQEWRHAHGMRCLGVPNTKHFHDITLIE 350
BLAST of mRNA_S-firma_F_contig109.1191.1 vs. uniprot
Match: A0A5B8MTJ1_9CHLO (Subunit 3 of splicing factor 3A n=4 Tax=Chloropicon primus TaxID=1764295 RepID=A0A5B8MTJ1_9CHLO) HSP 1 Score: 351 bits (900), Expect = 2.590e-112 Identity = 211/509 (41.45%), Postives = 287/509 (56.39%), Query Frame = 2
Query: 32 MSSSLLERARGFHEDLEIYERAIIEQLENKPRTQKERVAQQHRIANLCDGSTERSLGLHDIYEDKDGSMREEVASM--RGQKVMDNFYDRLKETWSYHTHHPGLPVTFGPNVEAE---TEVKVQFSGEELYGKFFDLHDMFVRWVNLPQCKDKQLDYSQFLQALGRFQDIPEQEKLRGKAYAGFLADLREYLGGFLTRTQPLVDLNEVLGDTDSSFEEAWEAGTLPGWTSGRAATAAAGDAGKSAAA------PRVLDLKKFHDADELRALGMDRLKEGLEALGLKCGGTLEQRADRLFSVKGKKPEDIDPKLKAKGKKGGKXXXXXVXXXXXXXXXXXXXXXXXXXXXKEERR----KQLAALETKVKALLEVQTDTLDATKRQVDKKQTRTVEERDQEIQE-------EEQGALPEFNEEEDXXXXXEGPIYNPLNLPLGWDGKPIPYWLYKLHGLGVEFKCEICGDFSYKGRRNFDRHFQEWRHAHGMRCLGIPNTKHFHDIILIQ 1492
MSS+LLER R HE++E ER + + ++ R+AQ HR+ DG +RS L IY+D+DGS ++E+ M Q+V FY+RLKE YH HP L + E E + +V FSGEE G+F DLHD+ + N P+ +K L Y FL F+ IP+ KL + Y +L DL EYL GF R+QPL L L + F+E WE G + W D G A+ P+++DL+ F A +L A+G DR+KE L ALGLK GG+L Q+A+RL + KGK E++D KL AKGKK + +RR K +A LE +++AL+++ TL TK+QV+KK T T EE +++E ++QG NE+++ IYNPLN+P+G+DGKPIPYWLYKLHGL EFKCEICG+FSY GRR F++HF E RH HGM+CLGIPN+K F ++ I
Sbjct: 1 MSSTLLERTRALHEEIERSERLVAKDFHTDAKSHTSRLAQNHRVFQCVDGIRKRSRDLLTIYDDEDGSRKDELEGMAAENQEVYSLFYERLKEARDYHRRHPDLELASVDKDEEEFLKSRPRVDFSGEEAQGRFLDLHDVHRSFTNAPKFGNKDLSYLDFLGMFCDFRSIPKPSKLN-QEYKAYLEDLDEYLVGFYGRSQPLASLGAPLAAVEKEFDEMWERGEVEDWE----------DKGLGASTSQVKDNPKLIDLEDFESAGDLEAVGGDRIKEALVALGLKAGGSLSQKAERLMATKGKALEELDRKLFAKGKK------------------------PVRNAEEAQRRLSLSKAIALLECRIRALMQLMEKTLSDTKKQVEKKATSTYEELVADMEELQDRGQGDDQGGDGTDNEDDENDNI----IYNPLNIPVGFDGKPIPYWLYKLHGLNQEFKCEICGNFSYWGRRAFEKHFNEARHLHGMKCLGIPNSKIFSEVTKID 470
BLAST of mRNA_S-firma_F_contig109.1191.1 vs. uniprot
Match: UPI001C4E4908 (splicing factor SF3a60 homolog n=2 Tax=Proteaceae TaxID=4328 RepID=UPI001C4E4908) HSP 1 Score: 350 bits (899), Expect = 2.790e-112 Identity = 207/495 (41.82%), Postives = 288/495 (58.18%), Query Frame = 2
Query: 32 MSSSLLERARGFHEDLEIYERAIIEQLENKPRTQKERVAQQHRIANLCDGSTERSLGLHDIYEDKDGSMREEVASMRGQ-----KVMDNFYDRLKETWSYHTHHP-GLPVTFGPNVEA--ETEVKVQFSGEELYGKFFDLHDMFVRWVNLPQCKDKQLDYSQFLQALGRFQDIPEQEKLRGKAYAGFLADLREYLGGFLTRTQPLVDLNEVLGDTDSSFEEAWEAGTLPGWTSGRAATAAAGDAGKSAAAPRVLDLKKFHDADELRALGMDRLKEGLEALGLKCGGTLEQRADRLFSVKGKKPEDIDPKLKAKGKKGGKXXXXXVXXXXXXXXXXXXXXXXXXXXXKEERRKQLAALETKVKALLEVQTDTLDATKRQVDKKQTRTVEERDQEIQEEEQGALPEFNEEEDXXXXXEGPIYNPLNLPLGWDGKPIPYWLYKLHGLGVEFKCEICGDFSYKGRRNFDRHFQEWRHAHGMRCLGIPNTKHFHDIILIQ 1492
MSS+LLE R HE++E ER I++ L+ +P + +ER+ Q HR+ N+ D + L++IYEDKD + ++E+A++ GQ V +FYDRLKE YH HP V G E + E V+FSGEE +G++ DLH+++ +VN + ++YS +L + IP KL + Y +L L EYL F R +PL DL+ V ++ +EE W G + GW + + + G ++A V+DL + +EL +G +RLKE L ALGLK GGT++QRA+RLF K E +D K AK +G + + K++A +E K+K L E+ +T+ TK V+KKQ T EE + E +EEE A E +EE+ IYNPL LP+GWDGKPIPYWLYKLHGLG EFKCEICG+ SY GRR F+RHF+EWRH HGMRCLGIPNTK+F++I I+
Sbjct: 1 MSSTLLEVTRAGHEEVERLERLIVKDLQREPASNRERLFQSHRVRNMIDSIISTTEKLNEIYEDKDNARKDEIAALGGQTATGTNVFSSFYDRLKEIREYHRRHPVARVVDAGEEYEELLKQEPHVEFSGEEAFGRYLDLHELYNEYVNSKF--GEPIEYSAYLDVFAQPHKIPRNHKLT-RQYREYLEHLLEYLIYFFQRKEPLQDLDRVFSKVEADYEELWVDGKIQGWEN------KSQENGHASAQDSVIDLDYYSSVEELIEVGPERLKEALAALGLKAGGTVQQRAERLFLTKHTPLEQLDKKHFAKLSRG------------------VEQNGNAASSQQMDNSKEIALIEAKIKHLCELLYETILQTKENVEKKQALTYEEMEAEREEEEVQADTESDEEDQQ-------IYNPLKLPMGWDGKPIPYWLYKLHGLGQEFKCEICGNHSYWGRRAFERHFKEWRHQHGMRCLGIPNTKNFNEITSIK 461
BLAST of mRNA_S-firma_F_contig109.1191.1 vs. uniprot
Match: A0A7S3HNG2_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HNG2_9STRA) HSP 1 Score: 350 bits (898), Expect = 3.600e-112 Identity = 214/495 (43.23%), Postives = 297/495 (60.00%), Query Frame = 2
Query: 35 SSSLLERARGFHEDLEIYERAIIEQLENKPRTQKERVAQQHRIANLCDGSTERSLGLHDIYEDKDGSMREEVASMRGQKVMDNFYDRLKETWSYHTHHPGLPVTFGPNVEAETEVKVQFSGEELYGKFFDLHDMFVRWVNLPQCKDKQLDYSQFLQALGRFQDIPEQEKLRGKAYAGFLADLREYLGGFLTRTQPLVDLNEVLGDTDSSFEEAWEAGTLPGWTSGRAATAAAGDAGKSAAAPRVLDLKKFHDADELRALGMDRLKEGLEALGLKCGGTLEQRADRLFSVKGKKPEDIDPKLKAKGKKGGKXXXXXVXXXXXXXXXXXXXXXXXXXXXKEERRKQLAALETKVKALLEVQTDTLDATKRQVDKKQTRTVEERDQEIQEEEQGA--LPEF--------NEEEDXXXXXEGPIYNPLNLPLGWDGKPIPYWLYKLHGLGVEFKCEICGDFSYKGRRNFDRHFQEWRHAHGMRCLGIPNTKHFHDIILI 1489
SSS LE R HE +E YE A+ ++L+ KP QK +V QQH++ L G T+ S L +YED D +++EE+A +R + +FY L+ + Y P + +++ + +VK FSGEE++GK+ DL+++ +++ N+ + + DY Q+L+ F +PE K + +AY+ +L +L YL F RT PL D N+++ D + + P + AT + +A + L L F+ A EL ALGMDRLKE LEALGLKCGGTL+ RA+RL+SV+GKKPEDI LKAK K K + +A E +VKA+ ++ + ++AT R +K+QTRT EER+ E++EEE G LP+ E++D + P+YNPLNLPLGWDGKPIPYW+YKLHGLGVE+KC+ICGD SY GRR FD+HFQEW+HAHGMR LGIPNTKHFHDI LI
Sbjct: 1 SSSQLELIRLNHELVEKYELAVGDELDVKPNGQKAKVWQQHKLKGLITGITKHSGELKRLYEDSDRTLQEELAVLRTPDLT-SFYAALQASKEYFETFPNAESSNASDIDVKVDVK--FSGEEIFGKYLDLNELHMQFSNVIKRAGIEQDYLQYLERFNDFFYLPEAVK-QSRAYSDYLDNLWTYLADFFQRTNPLSDWNKIMEDIKAGAPASL---LTPKESEETRAT--------NGSAAQPLRLGMFNTAGELEALGMDRLKEALEALGLKCGGTLQDRANRLWSVRGKKPEDIPANLKAKDTGSNKKRKLEAAA-------------------KGDEPDSVAWKEYRVKAVCDLMSSVVNATVRHAEKQQTRTAEEREAELREEEFGLAQLPQSAHGDGTKKGEDDDD----DAPVYNPLNLPLGWDGKPIPYWMYKLHGLGVEYKCQICGDHSYWGRRAFDKHFQEWKHAHGMRSLGIPNTKHFHDITLI 457
BLAST of mRNA_S-firma_F_contig109.1191.1 vs. uniprot
Match: A0A067DVA8_CITSI (Matrin-type domain-containing protein n=6 Tax=Citrus TaxID=2706 RepID=A0A067DVA8_CITSI) HSP 1 Score: 349 bits (896), Expect = 8.100e-112 Identity = 203/497 (40.85%), Postives = 287/497 (57.75%), Query Frame = 2
Query: 32 MSSSLLERARGFHEDLEIYERAIIEQLENKPRTQKERVAQQHRIANLCDGSTERSLGLHDIYEDKDGSMREEVASMRGQ-----KVMDNFYDRLKETWSYHTHHPGLPVTFGPNVEAETEVK----VQFSGEELYGKFFDLHDMFVRWVNLPQCKDKQLDYSQFLQALGRFQDIPEQEKLRGKAYAGFLADLREYLGGFLTRTQPLVDLNEVLGDTDSSFEEAWEAGTLPGW-TSGRAATAAAGDAGKSAAAPRVLDLKKFHDADELRALGMDRLKEGLEALGLKCGGTLEQRADRLFSVKGKKPEDIDPKLKAKGKKGGKXXXXXVXXXXXXXXXXXXXXXXXXXXXKEERRKQLAALETKVKALLEVQTDTLDATKRQVDKKQTRTVEERDQEIQEEEQGALPEFNEEEDXXXXXEGPIYNPLNLPLGWDGKPIPYWLYKLHGLGVEFKCEICGDFSYKGRRNFDRHFQEWRHAHGMRCLGIPNTKHFHDIILIQ 1492
MSS+LLE R HE++E ER +++ L+ +P + K+R+ Q HR+ N+ D T+ + L +IY DKD + ++E+A++ GQ V +FYDRLKE YH HP V + + E +K V+FSGEE YG++ DLH+++ +++N K+++YS +L R +IP + K+ + Y ++ L EYL F RT+PL DL+ + + FEE W TL GW T G+ + G A LDL + +EL +G +RLKE L A GLK GGTL+QRA+RLF K + +D K AKG +G + K +A +E K+K L ++ ++T++ T + V KKQ T EE + E +E ++EE IYNPL LP+GWDGKPIPYWLYKLHGLG EFKCEICG++SY GRR F+RHF+EWRH HGMRCLGIPNTK+F++I I+
Sbjct: 1 MSSTLLEVTRAAHEEVERLERLVVKDLQTEPNSNKDRLVQSHRVRNMIDTITDTTERLIEIYADKDNARKDEIAALGGQTATGTNVFSSFYDRLKEIREYHRRHPSARVAVDASEDYENLLKEEPLVEFSGEEAYGRYLDLHELYNQYINSKF--GKEIEYSAYLDVFSRPHEIPRKLKMT-RQYREYIEKLLEYLIYFFQRTEPLQDLDRIFSKVVADFEEQWVTSTLQGWETEGQ-------ENGHVPAQHSELDLDYYSTVEELMEVGSERLKEELAAKGLKSGGTLQQRAERLFLTKHTPLDKLDKKHFAKGARG------------------KEQNGVAPATQEVGNLKDIALMEAKMKKLCDLLSETIERTIQNVQKKQALTYEEMEAEREEXXXXXXXXXDDEEQQ-------IYNPLKLPMGWDGKPIPYWLYKLHGLGQEFKCEICGNYSYWGRRAFERHFKEWRHQHGMRCLGIPNTKNFNEITSIE 462 The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig109.1191.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-firma_F_contig109.1191.1 >prot_S-firma_F_contig109.1191.1 ID=prot_S-firma_F_contig109.1191.1|Name=mRNA_S-firma_F_contig109.1191.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=487bp MSSSLLERARGFHEDLEIYERAIIEQLENKPRTQKERVAQQHRIANLCDGback to top mRNA from alignment at S-firma_F_contig109:551..7927- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-firma_F_contig109.1191.1 ID=mRNA_S-firma_F_contig109.1191.1|Name=mRNA_S-firma_F_contig109.1191.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=7377bp|location=Sequence derived from alignment at S-firma_F_contig109:551..7927- (Sphaerotrichia firma ET2_F female)back to top Coding sequence (CDS) from alignment at S-firma_F_contig109:551..7927- >mRNA_S-firma_F_contig109.1191.1 ID=mRNA_S-firma_F_contig109.1191.1|Name=mRNA_S-firma_F_contig109.1191.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=2922bp|location=Sequence derived from alignment at S-firma_F_contig109:551..7927- (Sphaerotrichia firma ET2_F female)back to top |