mRNA_S-firma_F_contig10879.1164.1 (mRNA) Sphaerotrichia firma ET2_F female
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Overview
Homology
BLAST of mRNA_S-firma_F_contig10879.1164.1 vs. uniprot
Match: D7FJQ7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJQ7_ECTSI) HSP 1 Score: 535 bits (1378), Expect = 2.540e-184 Identity = 247/296 (83.45%), Postives = 271/296 (91.55%), Query Frame = 1
Query: 4 VHRLRKEQDLYESQYPERVQLLLNMGFEWDHTAVPDEWELIILGIEVFFRLNSHCRVPMRFTVPAEEPWPMEIWGHKLGTRIAQMRMTGRWLGQDEQTTEERRSRLEKFGFEWRLRVKDDEYDAEGNPEEFSILCEGLSVYRQLGGSVPNMPPTWVVPNADPWPIKTRGFPLGSQVRLIRSRQKYAKDSQEKADILLALDVPINPTITKEKISGRWGGPTETRFDKLCMALERFIALYGHSQVPNNFEVPRSEKWPEITWNVKLGRSLDNIVTKGTFIKEYPDRQARLEALGFDTD 891
VHRLR EQ +Y++QYPERVQLL MGFEW+HTAVPDEWELIILGI VFF ++ H RVPMRF VPAEEPWPMEIWGHKLG+RIAQMRMTGRWLGQDE+TTEERR+ LE++GFEWRLRVKDDEYDA+GNPEEFSILCEGL VYR+LGGSVPNMPPTWVVPNA+PWPI+TRGFPLG+QVR+IRSRQKYAKDSQEK DILLALDVPINP +T EK+ GRWGGPTETRF+KLC ALE F+ LYGH+QVPN FEVPR WPE TW+VKLGRSL NIV+KGTFIK YPDRQARLEALGFDTD
Sbjct: 180 VHRLRNEQTVYDAQYPERVQLLRTMGFEWEHTAVPDEWELIILGIGVFFGIHGHSRVPMRFVVPAEEPWPMEIWGHKLGSRIAQMRMTGRWLGQDEKTTEERRTVLEQYGFEWRLRVKDDEYDADGNPEEFSILCEGLEVYRELGGSVPNMPPTWVVPNAEPWPIRTRGFPLGAQVRIIRSRQKYAKDSQEKTDILLALDVPINPNVTNEKLGGRWGGPTETRFNKLCKALETFVVLYGHAQVPNTFEVPRDPSWPEETWDVKLGRSLVNIVSKGTFIKGYPDRQARLEALGFDTD 475
BLAST of mRNA_S-firma_F_contig10879.1164.1 vs. uniprot
Match: A0A6H5JXP7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXP7_9PHAE) HSP 1 Score: 534 bits (1375), Expect = 6.270e-180 Identity = 248/296 (83.78%), Postives = 269/296 (90.88%), Query Frame = 1
Query: 4 VHRLRKEQDLYESQYPERVQLLLNMGFEWDHTAVPDEWELIILGIEVFFRLNSHCRVPMRFTVPAEEPWPMEIWGHKLGTRIAQMRMTGRWLGQDEQTTEERRSRLEKFGFEWRLRVKDDEYDAEGNPEEFSILCEGLSVYRQLGGSVPNMPPTWVVPNADPWPIKTRGFPLGSQVRLIRSRQKYAKDSQEKADILLALDVPINPTITKEKISGRWGGPTETRFDKLCMALERFIALYGHSQVPNNFEVPRSEKWPEITWNVKLGRSLDNIVTKGTFIKEYPDRQARLEALGFDTD 891
VHRLR EQ +YE+QYPERVQLL MGFEW+HTAVPDEWELIILGI VFF ++ H RVPMRF VPAEEPWPMEIWGHKLG+RIAQMRMTGRWLGQDE+TTEERR+ LE++GFEWRLRVKDDEYDA+GNPEEFSILCE L VYR+LGGSVPNMPPTWVVPNADPWPI+TRGFPLG+QVR+IRSRQKYAKDSQEK D LLALDVPINP IT EK+ GRWGGPTETRF+KLC ALE F+ LYGH+QVPN FEVPR WPE TW+VKLGRSL NIV+KGTFIK YPDRQARLEALGFDTD
Sbjct: 294 VHRLRNEQTIYEAQYPERVQLLRTMGFEWEHTAVPDEWELIILGIGVFFGIHGHSRVPMRFVVPAEEPWPMEIWGHKLGSRIAQMRMTGRWLGQDEKTTEERRTVLEQYGFEWRLRVKDDEYDADGNPEEFSILCEALKVYRELGGSVPNMPPTWVVPNADPWPIRTRGFPLGAQVRIIRSRQKYAKDSQEKTDTLLALDVPINPNITNEKLGGRWGGPTETRFNKLCKALETFVMLYGHAQVPNTFEVPRDPSWPEETWDVKLGRSLVNIVSKGTFIKGYPDRQARLEALGFDTD 589
BLAST of mRNA_S-firma_F_contig10879.1164.1 vs. uniprot
Match: A0A835YSF3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSF3_9STRA) HSP 1 Score: 157 bits (398), Expect = 7.650e-40 Identity = 118/373 (31.64%), Postives = 167/373 (44.77%), Query Frame = 1
Query: 4 VHRLRKEQDLYESQYPERVQLLLNMGFEWDH-------TAVP-----------------------------DEWELIILGIEVFFRLNSHCRVPMRFTVPAEEPWPMEIWGHKLGTRIAQMRMTGRWLGQD-------------EQTTEERRSRLEKFG------------FEWRLRVKDDEYDAEGNPEEFSILCEGLS----------------VYRQLGGSVPNMPPTWVVPNADPWPIKTRGFPLGSQVRLIRSRQK--YAKDSQEKADILLALDVPINPTITKEKISGRWGGPTETRFDKLCMALERFIALYGHSQVPNNFEVPRSEKWPEITWNVKLGRSLDNIVTKGTFIKEYPDRQARLEALGFD 885
V +LR E+D Y + YPERVQ+L ++GFEW TA D+WE ++ G+ + L+ RVP RF VPAE PWP + G KLG R+ +R TGR+L Q + EER + L+ G FEW++R DD +A + F + E L V++ L G +P +VVP+ + WP + G LG + IR R + Y ++ L A+ + K + TET+F K+ AL + L G VP +F VP WPE W +KLG+S+ +I + GTFIK +P R+A LEA GFD
Sbjct: 56 VAQLRNERDEYVAMYPERVQMLRSVGFEWGEGQQAPSVTAXXXXXXXXXXXXXXXXXXPAKVGRPARKPKVDDWEAVVTGLRTYAALHGDTRVPSRFAVPAEAPWPEALHGDKLGMRVNAIRSTGRYLQQFLAEGAKKASCGLLPERREERHTELDALGXXXXXXXXXXXXFEWKVRTSDDADEA--SAAGFEAVVEALQDLSILLMFXXXXXXXQVFKSLRGHT-LVPSDFVVPSTEEWPQRLWGLGLGQRCSGIRRRVRNMYVAGHPQRLQQLAAIGFDCD---NKNQA-------TETKFRKIFNALMMYRDLNGTLDVPQSFAVPGEAPWPEEWWGMKLGQSVASIRSTGTFIKAHPARRAMLEAEGFD 415
BLAST of mRNA_S-firma_F_contig10879.1164.1 vs. uniprot
Match: A0A7S4MVR1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MVR1_9STRA) HSP 1 Score: 145 bits (365), Expect = 2.980e-35 Identity = 91/277 (32.85%), Postives = 139/277 (50.18%), Query Frame = 1
Query: 91 DHTAVPDEWELIILGIEVFFRLNSHCRVPMRFTVPAEEPWPMEIWGHKLGTRIAQMRMTGRWLGQDEQTTEERRSRLEKFGFEWRLRVKDDEYDAEGNPEEFSILCEGLSVYRQL-----GGSVPNMPPTWVVPNADPWPIKTRGFPLGSQVRLIRSRQKYAKDSQEKADILLALDVPINPTITKEKISGRWGGPTETRFDKLCMALERFIALYGHSQVPNNFEVPR-----SEKWPEITWNVKLGRSLDNIVTKGTFIKEYPDRQARLEALGFDTD 891
D A EW ++ + ++ +VP RF VP PWP WG KLG R++ +R TG++ + Q+ + RRS L+ GF WRLR + +G F + L Y+ + GG + N+P +VVPNADPWP+ TRG PLG ++ IRS+ Y K + +D L L + I + R+ ++ AL R+ L G VP F +P +E+W E ++LG ++ + ++GTF+K P R+ L+ LGF D
Sbjct: 125 DGGADAGEWTAVVESLRMYKAAYGDLKVPSRFVVPGMPPWPEAGWGLKLGQRVSAIRSTGKY---NVQSDDARRSALDDMGFLWRLRSPSGDKKMDGIT--FDQIYVALETYKSVIGSGKGGKI-NVPANFVVPNADPWPVSTRGLPLGKKIPAIRSKA-YLKSNPGASDKLNELGFEFDGKIAAN----------DQRYKRVYDALVRYKELNGDLLVPQPFVIPEDGQAGAEEWNEDARGLRLGARVNAVRSQGTFVKTNPGRRRELDELGFVWD 384
BLAST of mRNA_S-firma_F_contig10879.1164.1 vs. uniprot
Match: B7FW16_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7FW16_PHATC) HSP 1 Score: 142 bits (359), Expect = 1.850e-34 Identity = 88/285 (30.88%), Postives = 139/285 (48.77%), Query Frame = 1
Query: 91 DHTAVPDEWELIILGIEVFFRLNSHCRVPMRFTVPAEEPWPMEIWGHKLGTRIAQMRMTGRWL-GQDEQTTEERRSRLEKFGFEWRLRVKDDEYDAEGNPEEFSILCE----GLSVYRQLGGSVPNMPPTWVVPNADPWPIKTRGFPLGSQVRLIRSRQKYAKDSQEKADILLALD-------------VPINPTITKEKISGRWGGP---TETRFDKLCMALERFIALYGHSQVPNNFEVPRSEKWPEITWNVKLGRSLDNIVTKGTFIKEYPDRQARLEALGF 882
D TA EW ++ + ++ +VP +F VP PWP WG KLG +A +R+TG+++ G+D+ R+ LEK GF W R + AE + ++ E L YR+ + +P ++VP+A+PWP + RG PLGSQ+ + Q + Q K L ++ P P ++ E P + RF K+ +AL + +YG VP F VP WP+ TW ++LG ++ + ++GTF+ PDR+ L+ LGF
Sbjct: 149 DDTA---EWRAVLAALTLYQAAFGDVKVPQKFIVPTASPWPKPAWGLKLGKVVANIRLTGKYIHGRDK-----RKQALEKLGFLWAARSTP-QTRAEAEDDRSNVTVEQILAALVAYRENVAPLGPVPAKYIVPDAEPWPERVRGLPLGSQLARLPMDQ-LPETIQAKLQDLGVMERYMPLASSGSMGAPPTAPVVSGEAYQSASNVPPTANDIRFHKVYLALRTYKDVYGDLLVPQPFAVPSKAPWPQETWGLRLGARVNAVRSQGTFVNANPDRRQALDDLGF 423
BLAST of mRNA_S-firma_F_contig10879.1164.1 vs. uniprot
Match: A0A7S2JR57_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2JR57_9STRA) HSP 1 Score: 139 bits (350), Expect = 2.320e-33 Identity = 84/258 (32.56%), Postives = 136/258 (52.71%), Query Frame = 1
Query: 112 EWELIILGIEVFFRLNSHCRVPMRFTVPAEEPWPMEIWGHKLGTRIAQMRMTGRWLGQDEQTTEERRSRLEKFGFEWRLRVKDDEYDAEGNPEEFSILCEGLSVYRQLGGSVPNMPPTWVVPNADPWPIKTRGFPLGSQVRLIRSRQKYAKDSQEKADILLALDVPINPTITKEKISGRWGGPTETRFDKLCMALERFIALYGHSQVPNNFEVPR-SEKWPEITWNVKLGRSLDNIVTKGTFIKEYPDRQARLEALGF 882
EW I+ +++ +VP RF VP+ PWP WG KLGT++A +R TG+++ D+ RR L+ GF WRLR + +G +F + + L Y++ G++ ++P T+ VP+ + WP +RG PLGS++ IRS+ Y K+ E+ L L + ++ + R+ + AL R+ +YG VP F VP+ +E W E W ++LG ++ I ++GTF+ P R+ L LGF
Sbjct: 98 EWRAILASFKMYKAAYGDLKVPSRFVVPSMPPWPESGWGLKLGTKVAAIRSTGKYVENDDG----RRQILDDIGFLWRLRSPSPDKKMDG--VKFEQIYDALVQYKKEFGNL-DVPITFSVPDIESWPQHSRGLPLGSKLATIRSKT-YLKNRPEQRKKLEELGLQLDGKVAANS----------ARYHLVYDALVRYKEIYGDLLVPQPFVVPKEAEDWNEPFWGLRLGARVNAIRSQGTFVNTDPSRREELSELGF 337
BLAST of mRNA_S-firma_F_contig10879.1164.1 vs. uniprot
Match: A0A6A3ZZ92_9STRA (HA domain-containing protein n=2 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A3ZZ92_9STRA) HSP 1 Score: 126 bits (317), Expect = 2.990e-29 Identity = 88/276 (31.88%), Postives = 134/276 (48.55%), Query Frame = 1
Query: 67 LLNMGFEWDHTAVPDEW-ELIILGIEVFFRLNSHCRVPMRFTVPAEEPWPMEIWGHKLGTRIAQMRMTGRWLGQDEQTTEERRSRLEKFGFEWRLRVKDDEYDAEGNPEEFSILCEGLSVYRQLGGSVPNMPPTWVVPNADPWPIKTRGFPLGSQVRLIRSRQKYAKDSQEKADILLALDVPINPTITKEKISGRWGGPTETRFDKLCMALERFIALYGHSQVPNNFEVPRSEKWPEITWNVKLGRSLDNIVTKGTFIKEYPDRQARLEALGFDTD 891
L +GF WD EW E I+ +E+F RL HCRVP F VP+++ W W KLG I+ +R G + Q + ++RLE+ GF W D Y+ E + + L + +L G +P ++VVP+ D W + LG+ VR IRS+ Y+ L L E++ W +++ ALE F L GH +VPN+F VP + W +++W++KLG + I +KG++ + + RLE LGF D
Sbjct: 229 LEELGFVWDFYEF--EWSERIMPALEIFHRLEGHCRVPNSFVVPSDDNWLKVSWDLKLGNVISGIRSKGCYSTQISRD----KTRLEELGFVW------DFYEFEWSER----IMPALETFHRLEGHC-RVPNSFVVPSDDNWLKVSWDLKLGNVVRGIRSKGSYSTQISRDKTRLEEL----------EELGFVWDFYEFEWSERIMPALETFHRLEGHCRVPNSFVVPSDDNWLKVSWDLKLGNVVRGIRSKGSYSTQISRDKTRLEELGFVWD 477
BLAST of mRNA_S-firma_F_contig10879.1164.1 vs. uniprot
Match: A0A6A3UP62_9STRA (Uncharacterized protein n=2 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A3UP62_9STRA) HSP 1 Score: 121 bits (304), Expect = 3.270e-27 Identity = 86/277 (31.05%), Postives = 133/277 (48.01%), Query Frame = 1
Query: 67 LLNMGFEWDHTAVPDEW-ELIILGIEVFFRLNSHCRVPMRFTVPAEEPWPMEIWGHKLGTRIAQMRMTGRWLGQDEQTTEERRSRLEKFGFEWRLRVKDDEYDAEGNPEEFSILCEGLSVYRQLGGSVPNMPPTWVVPNADPWPIKTRGFPLGSQVRLIRSRQKYAKD-SQEKADILLALDVPINPTITKEKISGRWGGPTETRFDKLCMALERFIALYGHSQVPNNFEVPRSEKWPEITWNVKLGRSLDNIVTKGTFIKEYPDRQARLEALGFDTD 891
L +GF WD EW E I+ +E+F RL HCRVP F VP+++ W W KLG I+ +R G + Q + ++RLE+ GF W D Y+ E + + L + +L G +P ++VVP+ D W + LG+ VR IRS+ Y+ S++K + E++ W +++ ALE F L GH +VP +F VP + WP W +K+G + I +KG++ + + RL+ LGF D
Sbjct: 309 LEELGFVWDFYEF--EWSERIMPALEIFHRLEGHCRVPNSFVVPSDDNWLKVSWDLKLGNVISGIRSKGCYSTQISRD----KTRLEELGFVW------DFYEFEWSER----IMPALETFHRLEGHC-RVPNSFVVPSDDNWLKVSWDLKLGNVVRGIRSKGSYSTQISRDKTRL--------------EELGFVWDFNEYEWSERVMPALESFHRLEGHCRVPKSFVVPSDDNWPIALWGLKVGNVVRGIRSKGSYSTQISRDKTRLKELGFVWD 554
BLAST of mRNA_S-firma_F_contig10879.1164.1 vs. uniprot
Match: A0A6A4E8C8_9STRA (Uncharacterized protein n=4 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A4E8C8_9STRA) HSP 1 Score: 106 bits (264), Expect = 6.240e-22 Identity = 86/317 (27.13%), Postives = 133/317 (41.96%), Query Frame = 1
Query: 67 LLNMGFEWDHTAVPDEW-ELIILGIEVFFRLNSHCRVPMRFTVPAEEPWPMEIWGHKLGTRIAQMRMTGRWLGQDEQTTEERRSRLEKFGFEWRLRVKDDEYDAEGNPEEFSILCEGLSVYRQLGGSV----------------------------------------PNMPPTWVVPNADPWPIKTRGFPLGSQVRLIRSRQKYAKD-SQEKADILLALDVPINPTITKEKISGRWGGPTETRFDKLCMALERFIALYGHSQVPNNFEVPRSEKWPEITWNVKLGRSLDNIVTKGTFIKEYPDRQARLEALGFDTD 891
L +GF WD EW E I+ +E+F RL HCRVP F VP+++ W W KLG I+ +R G + Q + ++RLE+ GF W D Y+ E + + L + +L G +P ++VVP+ D W + LG+ VR IRS+ Y+ S++K + E++ W +++ ALE F L GH +VP +F VP + WP W +K+G + I +KG++ + + RL+ LGF D
Sbjct: 229 LEELGFVWDFYEF--EWSERIMPALEIFHRLEGHCRVPNSFVVPSDDNWLKVSWDLKLGNVISGIRSKGCYSTQISRD----KTRLEELGFVW------DFYEFEWSER----IMPALETFHRLEGHCRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVPNSFVVPSDDNWLKVSWDLKLGNVVRGIRSKGSYSTQISRDKTRL--------------EELGFVWDFNEYEWSERVMPALESFHRLEGHCRVPKSFVVPSDDNWPIALWGLKVGNVVSGIRSKGSYSTQISRDKTRLKELGFVWD 515
BLAST of mRNA_S-firma_F_contig10879.1164.1 vs. uniprot
Match: W2PZ82_PHYPN (Uncharacterized protein n=9 Tax=Phytophthora TaxID=4783 RepID=W2PZ82_PHYPN) HSP 1 Score: 99.8 bits (247), Expect = 4.740e-20 Identity = 79/283 (27.92%), Postives = 131/283 (46.29%), Query Frame = 1
Query: 55 RVQLLLNMGFEWDHTAVPD-EWELIIL-GIEVFFRLNSHCRVPMRFTVPAE-EPWPMEIWGHKLGTRIAQMRMTGRWLGQDEQTTEERRSRLEKFGFEWRLRVKDDEYDAEGNPEEFSILCEGLSVYRQLGGSVPNMPPTWVVPNADPWPIKTRGFPLGSQVRLIRSRQKY----AKDSQEKADILLALDVPINPTITKEKISGRWGGPTETRFDKLCMALERFIALYGHSQVPNNFEVPRSEKWPEITWNVKLGRSLDNIVTKGTFIKEYPDRQARLEALGF 882
+VQ L ++GF W V D W+++ + + + +L HC VP F E + WP E+ G++LG + ++R T + E R LEK GF + + + SIL +Y ++ G+ N+ ++VP +PWP G LG R IR+R + A+D ++ +I +V + +W + AL+ ++ +YGH+ VP NF VP + WPE + +KLG + + + F +A+LEALGF
Sbjct: 171 QVQDLDDIGFVW---VVADYNWDVLFMPALRRYRQLYGHCDVPQNFVAGEEKDEWPRELHGYRLGAMVNRVRATSY-----AEYVERDREELEKLGFY---------FHSHDQKWQESIL-PAFEMYHRIYGNC-NIQTHFIVPEEEPWPQSMWGMRLGFIARNIRNRGDFFLQVARDYEKLENIGFVWNV----------FAAKWQYA-------VLPALDIYVRVYGHANVPANFVVPSEDPWPEESHGLKLGELATSFLRRKIFADFIEIDRAQLEALGF 417 The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10879.1164.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-firma_F_contig10879.1164.1 >prot_S-firma_F_contig10879.1164.1 ID=prot_S-firma_F_contig10879.1164.1|Name=mRNA_S-firma_F_contig10879.1164.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=297bp QVHRLRKEQDLYESQYPERVQLLLNMGFEWDHTAVPDEWELIILGIEVFFback to top mRNA from alignment at S-firma_F_contig10879:126..4581+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-firma_F_contig10879.1164.1 ID=mRNA_S-firma_F_contig10879.1164.1|Name=mRNA_S-firma_F_contig10879.1164.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=4456bp|location=Sequence derived from alignment at S-firma_F_contig10879:126..4581+ (Sphaerotrichia firma ET2_F female)back to top Coding sequence (CDS) from alignment at S-firma_F_contig10879:126..4581+ >mRNA_S-firma_F_contig10879.1164.1 ID=mRNA_S-firma_F_contig10879.1164.1|Name=mRNA_S-firma_F_contig10879.1164.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=1782bp|location=Sequence derived from alignment at S-firma_F_contig10879:126..4581+ (Sphaerotrichia firma ET2_F female)back to top |