mRNA_S-firma_F_contig10877.1163.1 (mRNA) Sphaerotrichia firma ET2_F female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-firma_F_contig10877.1163.1
Unique NamemRNA_S-firma_F_contig10877.1163.1
TypemRNA
OrganismSphaerotrichia firma ET2_F female (Sphaerotrichia firma ET2_F female)
Homology
BLAST of mRNA_S-firma_F_contig10877.1163.1 vs. uniprot
Match: A0A7S1CMR6_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CMR6_9STRA)

HSP 1 Score: 175 bits (443), Expect = 2.880e-53
Identity = 82/137 (59.85%), Postives = 110/137 (80.29%), Query Frame = 1
Query:   55 LFTDIFSVVRLNPEGRKFDRVSRLVCKGETYDTDLSVDIATQAFPCAAGDKITVSLASTLRLDGKPDEGTYDPS-GEPSLLDSYEYGMAGKVFQVDHKSDRRVNIFMSFGGLLLLLQGDYMNLSTMETDQRVYCLIR 462
            LF DIF+V  +NP+G+KFDRVSRLVCKGET+D  L +D+A++ FP  AG+K+ V++ STLRLDG+PD+GTY  + GE SLLD Y+YGM G+VF+ D++ D RV+++ SFGGLL+LL G   +LS++  DQRVYCLIR
Sbjct:    8 LFHDIFTVDDVNPDGKKFDRVSRLVCKGETWDVLLKIDVASEVFPVKAGEKLAVAVVSTLRLDGEPDDGTYQHNEGEESLLDQYDYGMHGRVFKYDYEEDDRVSVYASFGGLLMLLHGQQDSLSSLSLDQRVYCLIR 144          
BLAST of mRNA_S-firma_F_contig10877.1163.1 vs. uniprot
Match: A0A813B0I3_9DINO (DNA-directed RNA polymerases I, II, and III subunit RPABC3 n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A813B0I3_9DINO)

HSP 1 Score: 170 bits (431), Expect = 1.440e-51
Identity = 75/139 (53.96%), Postives = 105/139 (75.54%), Query Frame = 1
Query:   55 LFTDIFSVVRLNPEGRKFDRVSRLVCKGETYDTDLSVDIATQAFPCAAGDKITVSLASTLRLDGKPDEGTYDPSGEPSLLDSYEYGMAGKVFQVDHKSDRRVNIFMSFGGLLLLLQGDYMNLSTMETDQRVYCLIRHAG 471
            L  DIF+V  +NP+G+KFD+V+RL+CK ETY  D+S+DIA++ +P    +K  + L STLRLDGKPD+GTYD S + S LD++EYGM+GK+F+ DH  D RV+I+ S+GGLL+L+QG   +L  ++ D RVYCL+R A 
Sbjct:   11 LLNDIFTVTAVNPDGKKFDKVNRLICKSETYGIDMSIDIASEVYPLKKDEKFAMVLRSTLRLDGKPDDGTYDQSTKESALDAFEYGMSGKIFKYDHAEDARVSIYASYGGLLMLVQGKAEHLKALKLDSRVYCLMRRAA 149          
BLAST of mRNA_S-firma_F_contig10877.1163.1 vs. uniprot
Match: A0A024TMY4_9STRA (DNA-directed RNA polymerases I, II, and III subunit RPABC3 n=9 Tax=Saprolegniaceae TaxID=4764 RepID=A0A024TMY4_9STRA)

HSP 1 Score: 157 bits (397), Expect = 1.540e-46
Identity = 70/136 (51.47%), Postives = 100/136 (73.53%), Query Frame = 1
Query:   55 LFTDIFSVVRLNPEGRKFDRVSRLVCKGETYDTDLSVDIATQAFPCAAGDKITVSLASTLRLDGKPDEGTYDPSGEPSLLDSYEYGMAGKVFQVDHKSDRRVNIFMSFGGLLLLLQGDYMNLSTMETDQRVYCLIR 462
            +F DIF + +LNPEG+KF+RV+RL+CKG +Y+ +L +DI ++ FP    ++ T +L STL L+GKPD+G +D +G+P+LLD Y+YGM GKVFQ DH+    V I+ SFGGLL+ L+GD  +L  +    RVYCL+R
Sbjct:    6 MFEDIFEIKQLNPEGKKFERVTRLMCKGVSYELELMLDINSEVFPMKVHEQFTFALVSTLDLEGKPDDGIFDQTGKPTLLDRYDYGMYGKVFQYDHEGGNMVAIYASFGGLLMCLRGDQAHLRNIHNGSRVYCLMR 141          
BLAST of mRNA_S-firma_F_contig10877.1163.1 vs. uniprot
Match: K3X3H5_GLOUD (DNA-directed RNA polymerases I, II, and III subunit RPABC3 n=29 Tax=Oomycota TaxID=4762 RepID=K3X3H5_GLOUD)

HSP 1 Score: 157 bits (396), Expect = 2.120e-46
Identity = 70/136 (51.47%), Postives = 102/136 (75.00%), Query Frame = 1
Query:   55 LFTDIFSVVRLNPEGRKFDRVSRLVCKGETYDTDLSVDIATQAFPCAAGDKITVSLASTLRLDGKPDEGTYDPSGEPSLLDSYEYGMAGKVFQVDHKSDRRVNIFMSFGGLLLLLQGDYMNLSTMETDQRVYCLIR 462
            LF DIF V ++NP+G+KFD+V+R+VCKG +Y+ +L++DI ++ +     +K T +L STL L+GKPD+GTY+ SG+P+LLD Y+YGM GKVFQ DH+    V I+ SFGGLL+ L+G+  +L  +  D R+YCL+R
Sbjct:    5 LFEDIFEVRQVNPDGKKFDKVTRVVCKGVSYELELTLDINSEVYRLRQNEKFTFALVSTLDLEGKPDDGTYNQSGKPTLLDRYDYGMYGKVFQYDHEGGNVVAIYASFGGLLMCLRGEQRHLHMIHNDTRIYCLLR 140          
BLAST of mRNA_S-firma_F_contig10877.1163.1 vs. uniprot
Match: D8LM46_ECTSI (DNA-directed RNA polymerases I, II, and III subunit RPABC3 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LM46_ECTSI)

HSP 1 Score: 154 bits (388), Expect = 3.700e-45
Identity = 73/138 (52.90%), Postives = 98/138 (71.01%), Query Frame = 1
Query:   52 LLFTDIFSVVRLNPEGRKFDRVSRLVCKGETYDTDLSVDIATQAFPCAAGDKITVSLASTLRLDGKPDEGTYDPSG-EPSLLDSYEYGMAGKVFQVDHKSDRRVNIFMSFGGLLLLLQGDYMNLSTMETDQRVYCLIR 462
            +LF DIF V +LNP+G+KFDRV+RL CKG TYD DL +D     +P   G+++T  +ASTL L GKPD+GTY P G E SL D YEY M G+V++ D + D +V +F SFGGLL+ L GD  +++ +E D RV+CL+R
Sbjct:    4 VLFEDIFEVGKLNPDGKKFDRVNRLECKGVTYDMDLLLDTNCDIYPVKEGERLTFVIASTLDLSGKPDDGTYKPLGDEVSLADKYEYVMHGRVYRFDQQKDTKVQVFASFGGLLMRLTGDQRHVANIEVDSRVFCLLR 141          
BLAST of mRNA_S-firma_F_contig10877.1163.1 vs. uniprot
Match: A0A024G723_9STRA (Uncharacterized protein n=2 Tax=Albugo candida TaxID=65357 RepID=A0A024G723_9STRA)

HSP 1 Score: 149 bits (376), Expect = 6.890e-43
Identity = 68/136 (50.00%), Postives = 99/136 (72.79%), Query Frame = 1
Query:   55 LFTDIFSVVRLNPEGRKFDRVSRLVCKGETYDTDLSVDIATQAFPCAAGDKITVSLASTLRLDGKPDEGTYDPSGEPSLLDSYEYGMAGKVFQVDHKSDRRVNIFMSFGGLLLLLQGDYMNLSTMETDQRVYCLIR 462
            LF DIF V +LNPEG+KFD+V+R+V KG +Y+ +L++DI ++ +     DK T +L STL L+GKPD+G Y+ SG+ +LLD Y+YGM GK+FQ +H+    V I+ SFGGLL+ L+G+  +L  +  D R+YCL+R
Sbjct:   41 LFEDIFEVRQLNPEGKKFDKVTRVVGKGVSYELELTLDINSEVWRLKKNDKFTFALVSTLDLEGKPDDGIYNQSGKATLLDRYDYGMYGKIFQYEHEGGNNVAIYASFGGLLMRLRGEQRHLHLVHNDSRIYCLLR 176          
BLAST of mRNA_S-firma_F_contig10877.1163.1 vs. uniprot
Match: A0A5A8C6V6_CAFRO (Uncharacterized protein n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8C6V6_CAFRO)

HSP 1 Score: 148 bits (373), Expect = 1.290e-42
Identity = 69/138 (50.00%), Postives = 100/138 (72.46%), Query Frame = 1
Query:   55 LFTDIFSVVRLNPEGRKFDRVSRLVCKGETYDTDLSVDIATQAFPCAAGDKITVSLASTLRLDGKPDEGTYDPSGEPSLLDSYEYGMAGKVFQVDHKSDRRVNIFMSFGGLLLLLQGDYMNLSTMETDQRVYCLIRHA 468
            LF D+F V+R+NPEG+KF++V+RLVCKG T D D+ VDIA++ +     ++ ++ +ASTLRLDG+ D+  +D SG  +LLD Y+YGM G+VFQ D K  + V + +SFGGLL+ L+G+  +L+ +E D RVY L R A
Sbjct:   24 LFDDMFDVLRVNPEGKKFEKVNRLVCKGTTLDVDMIVDIASEVYNLGKDERFSLRIASTLRLDGRKDDDAFDQSGRETLLDQYDYGMCGRVFQYDIKGSK-VALMVSFGGLLMKLEGERQHLAAIELDARVYALFRKA 160          
BLAST of mRNA_S-firma_F_contig10877.1163.1 vs. uniprot
Match: A0A7S1BC37_9STRA (DNA-directed RNA polymerases I, II, and III subunit RPABC3 n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BC37_9STRA)

HSP 1 Score: 144 bits (364), Expect = 1.620e-41
Identity = 67/142 (47.18%), Postives = 98/142 (69.01%), Query Frame = 1
Query:   37 MADGKLLFTDIFSVVRLNPEGRKFDRVSRLVCKGETYDTDLSVDIATQAFPCAAGDKITVSLASTLRLDGKPDEGTYDPSGEPSLLDSYEYGMAGKVFQVDHKSDRRVNIFMSFGGLLLLLQGDYMNLSTMETDQRVYCLIR 462
            MA    LF DIF V +LNP+G+KF R++R+   G T+  DL +D  ++ +P A  +KIT+ L+STL LDG+PD+G YD SGEP++ D+YEY M G+VF + +K D  + + +SFGGLL+ L GD  +L  +  D+R+Y LI+
Sbjct:    1 MATRVTLFEDIFVVKQLNPDGKKFSRINRIQATGTTFQCDLLLDTNSEIYPIAEEEKITIVLSSTLSLDGRPDDGEYDQSGEPTMADNYEYVMHGRVFDIKYKGDGVIAVHVSFGGLLMRLTGDQRHLENVRADERLYILIK 142          
BLAST of mRNA_S-firma_F_contig10877.1163.1 vs. uniprot
Match: A0A7S2NQE3_9EUKA (DNA-directed RNA polymerases I, II, and III subunit RPABC3 n=1 Tax=Cyanoptyche gloeocystis TaxID=77922 RepID=A0A7S2NQE3_9EUKA)

HSP 1 Score: 144 bits (363), Expect = 3.210e-41
Identity = 69/147 (46.94%), Postives = 102/147 (69.39%), Query Frame = 1
Query:   52 LLFTDIFSVVRLNPEGRKFDRVSRLVCKGETYDTDLSVDIATQAFPCAAGDKITVSLASTLRLDGKPDEGTYDPSGEPSLLDSYEYGMAGKVFQVDHKSDRR----------VNIFMSFGGLLLLLQGDYMNLSTMETDQRVYCLIR 462
            +LF D+F +  ++ EG+KFD+VSR+   GETY+ DL +D+ T  +P A G+K+T++LASTL L GKP+  +Y+PS EPSL D YEY M GKV++ D   D++          V+++MS+GGLL++L+GD  NL  +E D R+Y L+R
Sbjct:    7 ILFEDMFEIKAVDREGKKFDKVSRIEGVGETYEMDLILDVNTDIYPLAEGNKVTLALASTLNLQGKPEGDSYEPSDEPSLADRYEYVMFGKVYKFDRDGDKKDAPKKNPNAKVSVYMSYGGLLMMLRGDPKNLLRIELDSRLYLLLR 153          
BLAST of mRNA_S-firma_F_contig10877.1163.1 vs. uniprot
Match: A0A2R5G8T6_9STRA (DNA-directed RNA polymerases I, II, and III subunit RPABC3 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G8T6_9STRA)

HSP 1 Score: 144 bits (362), Expect = 4.840e-41
Identity = 67/145 (46.21%), Postives = 103/145 (71.03%), Query Frame = 1
Query:   52 LLFTDIFSVVRLNPEGR---KFDRVSRLVCKGETYDTDLSVDIATQAFPCAAGDKITVSLASTLRLDGKPDEGTYDPSGEPSLLDSYEYGMAGKVFQVDH--KSDRRVNIFMSFGGLLLLLQGDYMNLSTMETDQRVYCLIRHAG 471
            +LF D F V  +NP+G+   +F  VSR+V +G T++ DL VDI ++ FP A  ++ T++LASTL +DGKPD+GTY+ SG P+LLD ++YGM G+VF  ++  + + RV I+ S+GGLL+ L GD   L+T++ D R+YCL++ + 
Sbjct:   10 ILFEDTFEVKDVNPKGKSSTQFKNVSRIVARGATFEMDLVVDIQSELFPMAMNERFTLALASTLDMDGKPDDGTYNQSGAPTLLDKFDYGMHGRVFSYEYVGEGEHRVAIYASYGGLLMKLVGDQRKLNTIDLDTRIYCLLKRSS 154          
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10877.1163.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S1CMR6_9STRA2.880e-5359.85Hypothetical protein n=1 Tax=Bicosoecida sp. CB-20... [more]
A0A813B0I3_9DINO1.440e-5153.96DNA-directed RNA polymerases I, II, and III subuni... [more]
A0A024TMY4_9STRA1.540e-4651.47DNA-directed RNA polymerases I, II, and III subuni... [more]
K3X3H5_GLOUD2.120e-4651.47DNA-directed RNA polymerases I, II, and III subuni... [more]
D8LM46_ECTSI3.700e-4552.90DNA-directed RNA polymerases I, II, and III subuni... [more]
A0A024G723_9STRA6.890e-4350.00Uncharacterized protein n=2 Tax=Albugo candida Tax... [more]
A0A5A8C6V6_CAFRO1.290e-4250.00Uncharacterized protein n=1 Tax=Cafeteria roenberg... [more]
A0A7S1BC37_9STRA1.620e-4147.18DNA-directed RNA polymerases I, II, and III subuni... [more]
A0A7S2NQE3_9EUKA3.210e-4146.94DNA-directed RNA polymerases I, II, and III subuni... [more]
A0A2R5G8T6_9STRA4.840e-4146.21DNA-directed RNA polymerases I, II, and III subuni... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_F_contig10877contigS-firma_F_contig10877:736..1577 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef902022-09-19
OGS1.0 of Sphaerotrichia firma ET2_F female2021-02-24
Properties
Property NameValue
Seed ortholog112098.XP_008608317.1
Preferred nameRPB8
PFAMsRNA_pol_Rpb8
Max annot lvl2759|Eukaryota
KEGG rclassRC02795
KEGG koko:K03016
KEGG ReactionR00435,R00441,R00442,R00443
KEGG Pathwayko00230,ko00240,ko01100,ko03020,ko04623,ko05016,ko05169,map00230,map00240,map01100,map03020,map04623,map05016,map05169
KEGG ModuleM00180,M00181,M00182
GOsGO:0000375,GO:0000377,GO:0000398,GO:0000418,GO:0000419,GO:0000428,GO:0003674,GO:0003676,GO:0003677,GO:0003697,GO:0003824,GO:0003899,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005665,GO:0005666,GO:0005730,GO:0005736,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006281,GO:0006283,GO:0006289,GO:0006351,GO:0006352,GO:0006353,GO:0006354,GO:0006360,GO:0006361,GO:0006363,GO:0006366,GO:0006367,GO:0006368,GO:0006370,GO:0006383,GO:0006396,GO:0006397,GO:0006399,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0007154,GO:0007165,GO:0007166,GO:0007167,GO:0007169,GO:0008150,GO:0008152,GO:0008380,GO:0008543,GO:0009058,GO:0009059,GO:0009301,GO:0009304,GO:0009452,GO:0009719,GO:0009893,GO:0009987,GO:0010033,GO:0010467,GO:0010468,GO:0010604,GO:0010628,GO:0016070,GO:0016071,GO:0016073,GO:0016591,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019222,GO:0019438,GO:0023052,GO:0030880,GO:0031974,GO:0031981,GO:0032774,GO:0032991,GO:0032993,GO:0033554,GO:0034062,GO:0034641,GO:0034645,GO:0034654,GO:0034660,GO:0036260,GO:0040029,GO:0042221,GO:0042795,GO:0042797,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044344,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044451,GO:0044452,GO:0044464,GO:0045815,GO:0046483,GO:0048518,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0055029,GO:0060147,GO:0060255,GO:0060964,GO:0060966,GO:0060968,GO:0061695,GO:0065007,GO:0070013,GO:0070848,GO:0070887,GO:0071310,GO:0071363,GO:0071495,GO:0071704,GO:0071774,GO:0090304,GO:0097159,GO:0097659,GO:0097747,GO:0098781,GO:0140098,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1902494,GO:1990234
Evalue2.24e-50
EggNOG OGsKOG3400@1|root,KOG3400@2759|Eukaryota
Descriptiontranscription by RNA polymerase I
COG categoryK
BRITEbr01611,ko00000,ko00001,ko00002,ko03021,ko03400
Hectar predicted targeting categoryother localisation
Exons3
Model size477
Cds size477
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_F_contig10877.1163.1prot_S-firma_F_contig10877.1163.1Sphaerotrichia firma ET2_F femalepolypeptideS-firma_F_contig10877 736..1577 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815631.2051938-CDS-S-firma_F_contig10877:735..8311622815631.2051938-CDS-S-firma_F_contig10877:735..831Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10877 736..831 +
1696949466.4642642-CDS-S-firma_F_contig10877:735..8311696949466.4642642-CDS-S-firma_F_contig10877:735..831Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10877 736..831 +
1622815631.2226248-CDS-S-firma_F_contig10877:1141..12901622815631.2226248-CDS-S-firma_F_contig10877:1141..1290Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10877 1142..1290 +
1696949466.4784548-CDS-S-firma_F_contig10877:1141..12901696949466.4784548-CDS-S-firma_F_contig10877:1141..1290Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10877 1142..1290 +
1622815631.2353454-CDS-S-firma_F_contig10877:1345..15771622815631.2353454-CDS-S-firma_F_contig10877:1345..1577Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10877 1346..1577 +
1696949466.4865415-CDS-S-firma_F_contig10877:1345..15771696949466.4865415-CDS-S-firma_F_contig10877:1345..1577Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10877 1346..1577 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-firma_F_contig10877.1163.1

>prot_S-firma_F_contig10877.1163.1 ID=prot_S-firma_F_contig10877.1163.1|Name=mRNA_S-firma_F_contig10877.1163.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=159bp
LSQLQPRTHKRFMADGKLLFTDIFSVVRLNPEGRKFDRVSRLVCKGETYD
TDLSVDIATQAFPCAAGDKITVSLASTLRLDGKPDEGTYDPSGEPSLLDS
YEYGMAGKVFQVDHKSDRRVNIFMSFGGLLLLLQGDYMNLSTMETDQRVY
CLIRHAGR*
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mRNA from alignment at S-firma_F_contig10877:736..1577+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-firma_F_contig10877.1163.1 ID=mRNA_S-firma_F_contig10877.1163.1|Name=mRNA_S-firma_F_contig10877.1163.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=842bp|location=Sequence derived from alignment at S-firma_F_contig10877:736..1577+ (Sphaerotrichia firma ET2_F female)
CTGAGCCAACTTCAACCGCGCACACACAAACGCTTCATGGCCGACGGCAA GCTCCTCTTCACCGATATTTTCTCCGTCGTCCGCCTCAATCCAGAGGTGT GTGTGTGTGTCTGTATGTATGTGTGTGTTTGCCTGAAAGTGTGTGAGTGT GTGTGTGTCTGTCGTTGTCTGTGCCTGTCTGTATCTGTGTGTGTGCCTGT TTGTGTTGTGCGTGTGGCACTATTCGTGTAACTCTGTCTGTCTGTCTGTG TGTCTGTTTCTGTTTCTGTGTGGAAGTGTGTAAAGTGTTGTGTGTGACTC TCTCTCTCTCTCTTGTGGCATTTTTTTGTGTGGCGTTTTTGTTGGTGTCT GTACTGTGTGTCTTCGTCACACTGTGCTTTCTCTCACACACCTCTCTTTG CCGCAGGGGCGCAAGTTTGACCGTGTGTCACGGCTTGTGTGCAAGGGGGA GACGTACGACACGGACCTCTCCGTGGACATTGCGACACAGGCGTTCCCAT GCGCGGCGGGGGATAAGATCACAGTGTCGCTGGCCAGCACGCTGCGCTTG GACGGGTGTGTGTGTGCGCGCGCGGCGCGCGTTTGCTCCCCCTCACCCAC CCACCCACAGCAAGCCAGACGAGGGAACGTACGACCCCAGCGGTGAGCCG TCGCTGCTGGACTCGTACGAGTACGGCATGGCGGGGAAGGTGTTCCAGGT AGATCACAAGAGCGACCGCCGGGTGAACATCTTCATGAGCTTTGGTGGCC TGCTGCTGCTGTTGCAAGGCGACTACATGAACCTGTCAACCATGGAGACA GACCAGCGTGTGTATTGCTTGATTCGACACGCCGGGCGATGA
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Coding sequence (CDS) from alignment at S-firma_F_contig10877:736..1577+

>mRNA_S-firma_F_contig10877.1163.1 ID=mRNA_S-firma_F_contig10877.1163.1|Name=mRNA_S-firma_F_contig10877.1163.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=954bp|location=Sequence derived from alignment at S-firma_F_contig10877:736..1577+ (Sphaerotrichia firma ET2_F female)
CTGAGCCAACTTCAACCGCGCACACACAAACGCTTCATGGCCGACGGCAA
GCTCCTCTTCACCGATATTTTCTCCGTCGTCCGCCTCAATCCAGAGCTGA
GCCAACTTCAACCGCGCACACACAAACGCTTCATGGCCGACGGCAAGCTC
CTCTTCACCGATATTTTCTCCGTCGTCCGCCTCAATCCAGAGGGGCGCAA
GTTTGACCGTGTGTCACGGCTTGTGTGCAAGGGGGAGACGTACGACACGG
ACCTCTCCGTGGACATTGCGACACAGGCGTTCCCATGCGCGGCGGGGGAT
AAGATCACAGTGTCGCTGGCCAGCACGCTGCGCTTGGACGGGGGCGCAAG
TTTGACCGTGTGTCACGGCTTGTGTGCAAGGGGGAGACGTACGACACGGA
CCTCTCCGTGGACATTGCGACACAGGCGTTCCCATGCGCGGCGGGGGATA
AGATCACAGTGTCGCTGGCCAGCACGCTGCGCTTGGACGGCAAGCCAGAC
GAGGGAACGTACGACCCCAGCGGTGAGCCGTCGCTGCTGGACTCGTACGA
GTACGGCATGGCGGGGAAGGTGTTCCAGGTAGATCACAAGAGCGACCGCC
GGGTGAACATCTTCATGAGCTTTGGTGGCCTGCTGCTGCTGTTGCAAGGC
GACTACATGAACCTGTCAACCATGGAGACAGACCAGCGTGTGTATTGCTT
GATTCGACACGCCGGGCGATGACAAGCCAGACGAGGGAACGTACGACCCC
AGCGGTGAGCCGTCGCTGCTGGACTCGTACGAGTACGGCATGGCGGGGAA
GGTGTTCCAGGTAGATCACAAGAGCGACCGCCGGGTGAACATCTTCATGA
GCTTTGGTGGCCTGCTGCTGCTGTTGCAAGGCGACTACATGAACCTGTCA
ACCATGGAGACAGACCAGCGTGTGTATTGCTTGATTCGACACGCCGGGCG
ATGA
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