mRNA_S-firma_F_contig10868.1157.1 (mRNA) Sphaerotrichia firma ET2_F female
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Overview
Homology
BLAST of mRNA_S-firma_F_contig10868.1157.1 vs. uniprot
Match: K3WYT4_GLOUD (ADP-ribosylation factor n=30 Tax=Stramenopiles TaxID=33634 RepID=K3WYT4_GLOUD) HSP 1 Score: 241 bits (615), Expect = 8.090e-79 Identity = 111/180 (61.67%), Postives = 145/180 (80.56%), Query Frame = 1
Query: 4 GMLFSRLFSSF--SRDVKMLMLGLDAAGKSTVLYKLKLGETVSSIPTIGFNVETIEYKRMSMNVWDVGGQDKIRKLWRHYYSGSEALIYVVDSHDADRLELAREELHTILEAPEMADACVLVLANKQDLPRAQSPSQIAEAMGLHKLR-REWFIQGCCATTGDGLYEGMDWVVNTVNKRK 534
GM FSR+F +++++LM+GLDAAGK+T+LYKLKLGE V++IPTIGFNVET+EYK +S VWDVGGQDKIR LWRHYY ++ LI+VVDS+D DR++ AR+ELH +L E+ D+ +LV ANKQDLP A S +++ + +GLH LR R+WFIQ CCATTGDGLYEG+DW+ T+ K+K
Sbjct: 2 GMAFSRVFERLFGKKEMRILMVGLDAAGKTTILYKLKLGEVVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYYQNTQGLIFVVDSNDRDRVDAARDELHRMLNEDELRDSILLVFANKQDLPNAMSAAEMTDKLGLHGLRHRQWFIQACCATTGDGLYEGLDWLSATLQKKK 181
BLAST of mRNA_S-firma_F_contig10868.1157.1 vs. uniprot
Match: B8BS84_THAPS (ADP-ribosylation factor n=39 Tax=Eukaryota TaxID=2759 RepID=B8BS84_THAPS) HSP 1 Score: 241 bits (614), Expect = 1.230e-78 Identity = 111/182 (60.99%), Postives = 146/182 (80.22%), Query Frame = 1
Query: 4 GMLFSRLFSSF--SRDVKMLMLGLDAAGKSTVLYKLKLGETVSSIPTIGFNVETIEYKRMSMNVWDVGGQDKIRKLWRHYYSGSEALIYVVDSHDADRLELAREELHTILEAPEMADACVLVLANKQDLPRAQSPSQIAEAMGLHKLR---REWFIQGCCATTGDGLYEGMDWVVNTVNKRK 534
G+ FSRLF +++++LM+GLDAAGK+T+LYKLKLGE V++IPTIGFNVET+EYK +S VWDVGGQDKIR LWRHYY ++ LI+VVDS+D+DR++ AR+E+H +L E+ DA +LV ANKQDLP A S +++ + +GLH LR R+W+IQ CCATTGDGLYEG+DW+ T+ KRK
Sbjct: 2 GLTFSRLFERMFGKKEMRILMVGLDAAGKTTILYKLKLGEVVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYYQNTQGLIFVVDSNDSDRIDAARDEMHRMLNEDELRDAVLLVFANKQDLPNAMSAAEMTDKLGLHGLRPSYRQWYIQACCATTGDGLYEGLDWLSATLVKRK 183
BLAST of mRNA_S-firma_F_contig10868.1157.1 vs. uniprot
Match: A0A0P1B1D9_PLAHL (Adp-ribosylation factor n=17 Tax=Peronosporaceae TaxID=4777 RepID=A0A0P1B1D9_PLAHL) HSP 1 Score: 241 bits (614), Expect = 2.390e-78 Identity = 111/180 (61.67%), Postives = 145/180 (80.56%), Query Frame = 1
Query: 4 GMLFSRLFSSF--SRDVKMLMLGLDAAGKSTVLYKLKLGETVSSIPTIGFNVETIEYKRMSMNVWDVGGQDKIRKLWRHYYSGSEALIYVVDSHDADRLELAREELHTILEAPEMADACVLVLANKQDLPRAQSPSQIAEAMGLHKLR-REWFIQGCCATTGDGLYEGMDWVVNTVNKRK 534
GM FSR+F +++++LM+GLDAAGK+T+LYKLKLGE V++IPTIGFNVET+EYK +S VWDVGGQDKIR LWRHYY ++ LI+VVDS+D DR++ AR+ELH +L E+ D+ +LV ANKQDLP A S +++ + +GLH LR R+WFIQ CCATTGDGLYEG+DW+ T+ K+K
Sbjct: 2 GMAFSRVFERLFGKKEMRILMVGLDAAGKTTILYKLKLGEVVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYYQNTQGLIFVVDSNDRDRVDAARDELHRMLNEDELRDSVLLVFANKQDLPNAMSAAEMTDKLGLHGLRHRQWFIQACCATTGDGLYEGLDWLSATLQKQK 181
BLAST of mRNA_S-firma_F_contig10868.1157.1 vs. uniprot
Match: M4BN95_HYAAE (ADP-ribosylation factor n=8 Tax=Oomycota TaxID=4762 RepID=M4BN95_HYAAE) HSP 1 Score: 239 bits (611), Expect = 3.290e-78 Identity = 110/180 (61.11%), Postives = 145/180 (80.56%), Query Frame = 1
Query: 4 GMLFSRLFSSF--SRDVKMLMLGLDAAGKSTVLYKLKLGETVSSIPTIGFNVETIEYKRMSMNVWDVGGQDKIRKLWRHYYSGSEALIYVVDSHDADRLELAREELHTILEAPEMADACVLVLANKQDLPRAQSPSQIAEAMGLHKLR-REWFIQGCCATTGDGLYEGMDWVVNTVNKRK 534
GM FSR+F +++++LM+GLDAAGK+T+LYKLKLGE V++IPTIGFNVET+EYK +S VWDVGGQDKIR LWRHYY ++ LI+VVDS+D DR++ AR+ELH +L E+ D+ +LV ANKQDLP A S +++ + +GLH LR R+WFIQ CCATTGDGLYEG+DW+ T+ K++
Sbjct: 2 GMAFSRVFERLFGKKEMRILMVGLDAAGKTTILYKLKLGEVVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYYQNTQGLIFVVDSNDRDRVDAARDELHRMLNEDELRDSVLLVFANKQDLPNAMSAAEMTDKLGLHGLRHRQWFIQACCATTGDGLYEGLDWLSATLQKKQ 181
BLAST of mRNA_S-firma_F_contig10868.1157.1 vs. uniprot
Match: F8QQM6_AMPCA (ADP-ribosylation factor n=23 Tax=Dinophyceae TaxID=2864 RepID=F8QQM6_AMPCA) HSP 1 Score: 236 bits (603), Expect = 5.420e-77 Identity = 111/180 (61.67%), Postives = 144/180 (80.00%), Query Frame = 1
Query: 4 GMLFSRLFSSF--SRDVKMLMLGLDAAGKSTVLYKLKLGETVSSIPTIGFNVETIEYKRMSMNVWDVGGQDKIRKLWRHYYSGSEALIYVVDSHDADRLELAREELHTILEAPEMADACVLVLANKQDLPRAQSPSQIAEAMGLHKLR-REWFIQGCCATTGDGLYEGMDWVVNTVNKRK 534
G+ F++L+ +++++LM+GLDAAGK+T+LYKLKLGE V++IPTIGFNVET+EYK +S VWDVGGQDKIR LWRHYY+G+ LI+VVDS+D DR+E AREEL +L EM DA VLV ANKQDLP A + +++ E +GLH LR R+WFIQ CATTGDGLYEG+DW+ T++ +K
Sbjct: 2 GLAFTKLWQRMIGKQEMRILMVGLDAAGKTTILYKLKLGEVVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYYTGTNGLIFVVDSNDRDRVEDAREELTKMLNEDEMRDAVVLVFANKQDLPNAMTAAEVTEKLGLHNLRHRQWFIQSACATTGDGLYEGLDWLSRTLSSKK 181
BLAST of mRNA_S-firma_F_contig10868.1157.1 vs. uniprot
Match: A0A7S1TNC0_9STRA (ADP-ribosylation factor n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TNC0_9STRA) HSP 1 Score: 236 bits (602), Expect = 7.950e-77 Identity = 106/179 (59.22%), Postives = 147/179 (82.12%), Query Frame = 1
Query: 4 GMLFSRLFSSF--SRDVKMLMLGLDAAGKSTVLYKLKLGETVSSIPTIGFNVETIEYKRMSMNVWDVGGQDKIRKLWRHYYSGSEALIYVVDSHDADRLELAREELHTILEAPEMADACVLVLANKQDLPRAQSPSQIAEAMGLHKLR-REWFIQGCCATTGDGLYEGMDWVVNTVNKR 531
G+ FS +++ F +R++++LM+GLDAAGK+T+LYKLKLGE V++IPTIGFNVET+EYK +S VWDVGGQDKIR LWRHYY ++ +I+VVDS+D DR++ AR+ELH ++ E+ +A +LV ANKQDLP A + +++ + +GLH +R R+W+IQ CCATTGDGLYEG+DW+ T+NKR
Sbjct: 2 GLSFSAIWARFMGNREMRILMVGLDAAGKTTILYKLKLGEVVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYYQNTQGVIFVVDSNDRDRVDAARDELHRMMGEDELREATLLVFANKQDLPNAMNAAELTQKLGLHDMRHRQWYIQACCATTGDGLYEGLDWLSATLNKR 180
BLAST of mRNA_S-firma_F_contig10868.1157.1 vs. uniprot
Match: A0A7S0H5T3_9EUKA (Hypothetical protein n=3 Tax=Eukaryota TaxID=2759 RepID=A0A7S0H5T3_9EUKA) HSP 1 Score: 237 bits (604), Expect = 1.180e-76 Identity = 107/174 (61.49%), Postives = 144/174 (82.76%), Query Frame = 1
Query: 13 FSRLFSSFSRDVKMLMLGLDAAGKSTVLYKLKLGETVSSIPTIGFNVETIEYKRMSMNVWDVGGQDKIRKLWRHYYSGSEALIYVVDSHDADRLELAREELHTILEAPEMADACVLVLANKQDLPRAQSPSQIAEAMGLHKLRREWFIQGCCATTGDGLYEGMDWVVNTVNKRK 534
+ RLF + ++++LM+GLDAAGK+TVLYKLKLGE V++IPTIGFNVET+EYK ++ VWDVGGQDKIR LWRHYY ++ +I+VVDS+D +RL++A+EEL +L+ E+ DA VLV ANKQDLP A QI EA+GL K+RR+W++QG CAT+GDGLYEG+DW+ +T++K+K
Sbjct: 44 WKRLFGN--TEMRILMVGLDAAGKTTVLYKLKLGEVVTTIPTIGFNVETVEYKNINFTVWDVGGQDKIRPLWRHYYQNTQGIIFVVDSNDKERLDMAKEELDKMLQEDELRDAVVLVFANKQDLPHALKVKQITEALGLEKMRRQWYVQGTCATSGDGLYEGLDWLSSTLSKKK 215
BLAST of mRNA_S-firma_F_contig10868.1157.1 vs. uniprot
Match: A0A7S2W572_9STRA (ADP-ribosylation factor n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W572_9STRA) HSP 1 Score: 236 bits (602), Expect = 1.270e-76 Identity = 108/180 (60.00%), Postives = 143/180 (79.44%), Query Frame = 1
Query: 4 GMLFSRLFSSF--SRDVKMLMLGLDAAGKSTVLYKLKLGETVSSIPTIGFNVETIEYKRMSMNVWDVGGQDKIRKLWRHYYSGSEALIYVVDSHDADRLELAREELHTILEAPEMADACVLVLANKQDLPRAQSPSQIAEAMGLHKLR-REWFIQGCCATTGDGLYEGMDWVVNTVNKRK 534
G+ FSR++ R++++LM+GLDAAGK+T+LYKLKLGE V++IPTIGFNVET+EY+ +S VWDVGGQDKIR LWRHYY ++ LI+VVDS+D DR++ AR+ELH +L E+ ++ +LV ANKQDLP A S +++ E +GLH LR R W+IQ CCATTGDGLYEG+DW+ T+ K K
Sbjct: 16 GLTFSRIWDRMFGRREMRILMVGLDAAGKTTILYKLKLGEVVTTIPTIGFNVETVEYRNISFTVWDVGGQDKIRPLWRHYYQNTQGLIFVVDSNDRDRIDAARDELHRMLNEDELRESILLVFANKQDLPNAMSAAEMTEKLGLHNLRGRSWYIQACCATTGDGLYEGLDWLSATLTKNK 195
BLAST of mRNA_S-firma_F_contig10868.1157.1 vs. uniprot
Match: T0RM14_SAPDV (ADP-ribosylation factor n=3 Tax=Saprolegniaceae TaxID=4764 RepID=T0RM14_SAPDV) HSP 1 Score: 234 bits (597), Expect = 4.440e-76 Identity = 110/178 (61.80%), Postives = 140/178 (78.65%), Query Frame = 1
Query: 4 GMLFSRLFSS-FSR-DVKMLMLGLDAAGKSTVLYKLKLGETVSSIPTIGFNVETIEYKRMSMNVWDVGGQDKIRKLWRHYYSGSEALIYVVDSHDADRLELAREELHTILEAPEMADACVLVLANKQDLPRAQSPSQIAEAMGLHKLRREWFIQGCCATTGDGLYEGMDWVVNTVNKR 531
GMLFSR+ FS+ DV++LM+GLDAAGK+T+LYKLKLGE V++IPTIGFNVET+EYK ++ VWDVGGQDKIR LWRHYY + LI+VVDS+D DR++ AR+ELH +L E+ DA LV ANKQDLP + S +++ E +GL R W+IQ CCATTGDGLYEG+DW+ T+ K+
Sbjct: 2 GMLFSRVMDRLFSKQDVRILMVGLDAAGKTTILYKLKLGEVVTTIPTIGFNVETLEYKNINFTVWDVGGQDKIRPLWRHYYDNTRGLIFVVDSNDRDRIDQARDELHRMLAQDELRDAITLVFANKQDLPNSMSAAEMTEKLGLRTFGRPWYIQACCATTGDGLYEGLDWLSATLKKQ 179
BLAST of mRNA_S-firma_F_contig10868.1157.1 vs. uniprot
Match: E8Z6M1_PFIPI (ADP-ribosylation factor n=1 Tax=Pfiesteria piscicida TaxID=71001 RepID=E8Z6M1_PFIPI) HSP 1 Score: 233 bits (593), Expect = 1.860e-75 Identity = 106/179 (59.22%), Postives = 140/179 (78.21%), Query Frame = 1
Query: 4 GMLFSRLFSSF--SRDVKMLMLGLDAAGKSTVLYKLKLGETVSSIPTIGFNVETIEYKRMSMNVWDVGGQDKIRKLWRHYYSGSEALIYVVDSHDADRLELAREELHTILEAPEMADACVLVLANKQDLPRAQSPSQIAEAMGLHKLRREWFIQGCCATTGDGLYEGMDWVVNTVNKRK 534
G+ +RL+ +++++LMLGLDA GK+T+LYKLKLG+ V++IPTIGFNVET+EYK + VWD+GGQDKIR LWRHYY G+ LI+VVDS+D R++ A EELH +L EM DA VLV ANKQDLP + + ++AE MGLH+LRR W+IQ CATTG+GLYEG+DW+ T+++RK
Sbjct: 2 GLALARLWERLVGKQEMRLLMLGLDAVGKTTILYKLKLGQVVTTIPTIGFNVETLEYKNIRFTVWDIGGQDKIRPLWRHYYQGTNGLIFVVDSNDRHRVDDASEELHKMLSEDEMRDAVVLVFANKQDLPHSMTAGEVAEKMGLHQLRRSWYIQASCATTGEGLYEGLDWLSRTLSQRK 180 The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10868.1157.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-firma_F_contig10868.1157.1 >prot_S-firma_F_contig10868.1157.1 ID=prot_S-firma_F_contig10868.1157.1|Name=mRNA_S-firma_F_contig10868.1157.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=177bp MLFSRLFSSFSRDVKMLMLGLDAAGKSTVLYKLKLGETVSSIPTIGFNVEback to top mRNA from alignment at S-firma_F_contig10868:2521..3111- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-firma_F_contig10868.1157.1 ID=mRNA_S-firma_F_contig10868.1157.1|Name=mRNA_S-firma_F_contig10868.1157.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=591bp|location=Sequence derived from alignment at S-firma_F_contig10868:2521..3111- (Sphaerotrichia firma ET2_F female)back to top Coding sequence (CDS) from alignment at S-firma_F_contig10868:2521..3111- >mRNA_S-firma_F_contig10868.1157.1 ID=mRNA_S-firma_F_contig10868.1157.1|Name=mRNA_S-firma_F_contig10868.1157.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=1062bp|location=Sequence derived from alignment at S-firma_F_contig10868:2521..3111- (Sphaerotrichia firma ET2_F female)back to top |