mRNA_S-firma_F_contig10865.1154.1 (mRNA) Sphaerotrichia firma ET2_F female
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Overview
Homology
BLAST of mRNA_S-firma_F_contig10865.1154.1 vs. uniprot
Match: D7G209_ECTSI (B box-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G209_ECTSI) HSP 1 Score: 356 bits (914), Expect = 1.570e-116 Identity = 188/222 (84.68%), Postives = 200/222 (90.09%), Query Frame = 1
Query: 7 VDVYTGRWGGSKARTIKDELRFALAALSGMMVAGDRNWGQKNADLLDTLEENQDAFAEIFEVGRRYKITNPEKFRDFYGKMMYMLQDAQAQGRV--DLVNDIKMVYDLVEDRGGLEMLHDERLVAATADISGISMTKAEVDDQVAAKNKARAELLKEYVSDSFSRGEVERVLDSIADANNYIAFNVAPVERTIDLLTKNFHPDKPEAEWSLKLSAGSSGRKR 666
VDVY+GRW SKARTI +ELR LAALSGMMVAG+ NWGQKNA LLD+L++NQDAFAEIFEVGRRYKITNPEKFRDFYGKMMYMLQDAQAQGRV +LV DI+MVYDLVEDRGGLEML DER+VAATADISGISM+KAEV QVAAKNKARA LLK+YVSDSF + EVERVLDSIADANNYIAFNVAPVERTI LL NFHPDKPE EWSLKLSA S GRKR
Sbjct: 234 VDVYSGRWS-SKARTINEELRMTLAALSGMMVAGELNWGQKNAALLDSLDDNQDAFAEIFEVGRRYKITNPEKFRDFYGKMMYMLQDAQAQGRVGLELVKDIQMVYDLVEDRGGLEMLQDERVVAATADISGISMSKAEVSFQVAAKNKARAGLLKDYVSDSFPKEEVERVLDSIADANNYIAFNVAPVERTISLLQDNFHPDKPEGEWSLKLSA-SGGRKR 453
BLAST of mRNA_S-firma_F_contig10865.1154.1 vs. uniprot
Match: A0A6H5LC65_9PHAE (B box-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LC65_9PHAE) HSP 1 Score: 353 bits (906), Expect = 2.820e-115 Identity = 186/223 (83.41%), Postives = 199/223 (89.24%), Query Frame = 1
Query: 4 RVDVYTGRWGGSKARTIKDELRFALAALSGMMVAGDRNWGQKNADLLDTLEENQDAFAEIFEVGRRYKITNPEKFRDFYGKMMYMLQDAQAQGRV--DLVNDIKMVYDLVEDRGGLEMLHDERLVAATADISGISMTKAEVDDQVAAKNKARAELLKEYVSDSFSRGEVERVLDSIADANNYIAFNVAPVERTIDLLTKNFHPDKPEAEWSLKLSAGSSGRKR 666
RVDVY+ RW KARTI +ELR LAALSGMMVAG+RNWGQKNA LLD+L++NQDAFA+IFEVGRRYKITNPEKFRDFYGKMMYMLQDAQAQGRV +LV DI+MVYDLVEDRGGLEML DER+V ATADISGISM+KAEV QVAAKNKARA LLK+YVSDSF + EVERVLDSIADANNYIAFNVAPVERTI LL NFHPDKPE EWSLKLSA S GRKR
Sbjct: 238 RVDVYSSRWS-FKARTINEELRMTLAALSGMMVAGERNWGQKNAALLDSLDDNQDAFADIFEVGRRYKITNPEKFRDFYGKMMYMLQDAQAQGRVGLELVKDIQMVYDLVEDRGGLEMLQDERVVVATADISGISMSKAEVSFQVAAKNKARAGLLKDYVSDSFPKEEVERVLDSIADANNYIAFNVAPVERTISLLQDNFHPDKPEGEWSLKLSA-SGGRKR 458
BLAST of mRNA_S-firma_F_contig10865.1154.1 vs. uniprot
Match: A0A2Z6QK00_9GLOM (B box-type domain-containing protein n=1 Tax=Rhizophagus clarus TaxID=94130 RepID=A0A2Z6QK00_9GLOM) HSP 1 Score: 144 bits (362), Expect = 5.840e-36 Identity = 82/225 (36.44%), Postives = 138/225 (61.33%), Query Frame = 1
Query: 4 RVDVYTGRWGGSKARTIKDELRFALAALSGMMVAGDRNWGQKNADLLD--TLEENQDAFAEIFEVGRRYKITNPEKFRDFYGKMMYMLQDA-----QAQGRVDLVNDIKMVYDLVEDRGGLEMLHDERLVAATADISGISMTKAEVDDQVAAKNKARAELLKEYVSDSFSRGEVERVLDSIADANNYIAFNVAPVERTIDLLTKNFHPDKPEAEWSLKLSAGSSG 657
++D+ + + SK R + +++ + LSG+MVA D GQ +L++ + E+NQ+ F +IFE+GRR+KI NPEK RD YGK+MYML D+ Q +L+ IK VY +++RGGL +LH + +V AT +I ++ +++ ++ AK +A L +++ SD ++ E+++ L SI D + Y+ N ER + L K F+P+K E +SL +S+G +G
Sbjct: 315 KIDIIS--YSSSKTRRMVHQIKDLCSILSGLMVASDYKKGQ---ELINNRSFEDNQEFFQKIFEIGRRHKIMNPEKMRDAYGKLMYMLMDSVIPDVQDMLSFNLIIPIKTVYSFLKERGGLAVLHHDYIVDATKEIIPDGKSRPQINKEIRAKERAIENLSRKFASDKLTQEEIKQCLYSIGDNHAYLRGNRDCCERMVQYLQKYFNPNKIEKGYSLAISSGRNG 534
BLAST of mRNA_S-firma_F_contig10865.1154.1 vs. uniprot
Match: A0A8H3R479_9GLOM (Glucose-inhibited division protein A subfamily n=1 Tax=Rhizophagus clarus TaxID=94130 RepID=A0A8H3R479_9GLOM) HSP 1 Score: 144 bits (362), Expect = 8.010e-36 Identity = 82/225 (36.44%), Postives = 138/225 (61.33%), Query Frame = 1
Query: 4 RVDVYTGRWGGSKARTIKDELRFALAALSGMMVAGDRNWGQKNADLLD--TLEENQDAFAEIFEVGRRYKITNPEKFRDFYGKMMYMLQDA-----QAQGRVDLVNDIKMVYDLVEDRGGLEMLHDERLVAATADISGISMTKAEVDDQVAAKNKARAELLKEYVSDSFSRGEVERVLDSIADANNYIAFNVAPVERTIDLLTKNFHPDKPEAEWSLKLSAGSSG 657
++D+ + + SK R + +++ + LSG+MVA D GQ +L++ + E+NQ+ F +IFE+GRR+KI NPEK RD YGK+MYML D+ Q +L+ IK VY +++RGGL +LH + +V AT +I ++ +++ ++ AK +A L +++ SD ++ E+++ L SI D + Y+ N ER + L K F+P+K E +SL +S+G +G
Sbjct: 314 KIDIIS--YSSSKTRRMVHQIKDLCSILSGLMVASDYKKGQ---ELINNRSFEDNQEFFQKIFEIGRRHKIMNPEKMRDAYGKLMYMLMDSVIPDVQDMLSFNLIIPIKTVYSFLKERGGLAVLHHDYIVDATKEIIPDGKSRPQINKEIRAKERAIENLSRKFASDKLTQEEIKQCLYSIGDNHAYLRGNRDCCERMVQYLQKYFNPNKIEKGYSLAISSGRNG 533
BLAST of mRNA_S-firma_F_contig10865.1154.1 vs. uniprot
Match: A0A836CCT5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCT5_9STRA) HSP 1 Score: 141 bits (355), Expect = 1.970e-35 Identity = 91/221 (41.18%), Postives = 129/221 (58.37%), Query Frame = 1
Query: 4 RVDVYTGRWGGSKARTIKDELRFALAALSGMMVAGDRNWGQKNADLLDT-LEENQDAFAEIFEVGRRYKITNPEKFRDFYGKMMYMLQDAQAQGR------VDLVNDIKMVYDLVEDRGGLEMLHDERLVAATADISGISMTKAEVDDQVAAKNKARAELLKEYVSDSFSRGEVERVLDSIADANNYIAFNVAPVERTIDLLTKNFHPDKPEAEWSLKLSA 645
RVDV+T R SK I++E L +SG+ +AG G++ DT L +N FA FEVGRRYKI+NP K R YGKMM++LQDA A LV+ ++MV +E RG +L D R++AATA+++ + + + + AK +ARA L++ + S + S +VER LDSIADAN+Y+ NV PV + L +F K E +SL+L A
Sbjct: 103 RVDVFTRR---SKRAVIEEEQSAMLTTMSGLAIAGHVCGGERLVG--DTPLADNAAFFARAFEVGRRYKISNPAKLRATYGKMMFLLQDAVALSTNLKSRPPALVSQLQMVTPFLEARGAAALLSDARVLAATAEVTERKVGRGGLAAALRAKGEARAALVRAHASPTLSAADVERALDSIADANSYLEANVQPVAAALRCLRAHFTRSKAEDPYSLRLVA 318
BLAST of mRNA_S-firma_F_contig10865.1154.1 vs. uniprot
Match: A0A8K1CHU6_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CHU6_PYTOL) HSP 1 Score: 141 bits (355), Expect = 5.700e-35 Identity = 89/225 (39.56%), Postives = 129/225 (57.33%), Query Frame = 1
Query: 4 RVDVYTGRWGGSKARTIKDELRFALAALSGMMVAGDRNWGQKNADLLDTLEENQDAFAEIFEVGRRYKITNPEKFRDFYGKMMYMLQDAQAQG-----RVDLVNDIKMVYDLVEDRGGLEMLHDERLVAATADISGISMT--KAEVDDQVAAKNKARAELLKEYVSDSFSRGEVERVLDSIADANNYIAFNVAPVERTIDLLTKNFHPDKPEAEWSLKLSAGSSG 657
+VDV + R S + + EL+ L+ +SGMMVA D G K L + E+N F E+FE+GRRYKI NPE+ R+ YGKM+YMLQDA + V I+ V ++ R L++L D R V ATA S S+ +A+ +D + K +A EL+++Y S S S ++ VL SI D+ +Y+ N P+ R I L K F PD+ E +SL++ AG +G
Sbjct: 171 KVDVLSYR---SPVKRVIQELKEVLSTVSGMMVATDFRKG-KRLVLNNKFEDNDTFFREVFEIGRRYKIMNPERMRNNYGKMIYMLQDASMREIKNYLGFSCVGPIQTVKSFLKKRHALDLLKDRRCVTATAVFSSTSLEDDEAKPEDFLQEKQRAIDELVRDYASSSLSANDIRLVLASIDDSQSYLVSNRTPIIRMIKYLNKFFQPDRIEPNFSLEIRAGRNG 391
BLAST of mRNA_S-firma_F_contig10865.1154.1 vs. uniprot
Match: L1IZP0_GUITC (B box-type domain-containing protein n=2 Tax=Guillardia theta TaxID=55529 RepID=L1IZP0_GUITC) HSP 1 Score: 139 bits (351), Expect = 7.710e-35 Identity = 83/225 (36.89%), Postives = 132/225 (58.67%), Query Frame = 1
Query: 4 RVDVYTGRWG--GSKARTIKDELRFALAALSGMMVAGDRNWGQ---KNADLLDTLEENQDAFAEIFEVGRRYKITNPEKFRDFYGKMMYMLQDAQAQGRVDLVNDIKMVYDLVEDRGGLEMLHDE----RLVAATADISGISMTKAEVDDQVAAKNKARAELLKEYVSDSFSRGEVERVLDSIADANNYIAFNVAPVERTIDLLTKNFHPDKPEAEWSLKLSAGS 651
+VDV G W +KA I++E+ L L G++VAG+ G KN + +N++ F + E+GRR+KITNPEK R YGK++Y++QDA + +D+ DI VY+ +E R LE+L DE ++A ++ G+ ++AE++ + K KA + + Y +D S+ E+E L S+ D + Y+ N PV+ I LLT NF P+K E +SL++ +GS
Sbjct: 152 KVDVVRG-WSFRNTKADVIREEIADLLQLLLGLIVAGNPTKGSEIVKNKQI----SQNEEFFQRVLEIGRRFKITNPEKMRCTYGKLIYLMQDAPSAIDLDVAADIHTVYNFLEARDALEVLADEDIGTAIMAVSSSEGGVQRSRAELEADSSNKQKAIRSISERYANDKISKEEIEYCLFSMGDFHAYLETNRRPVDEMIALLTANFDPNKAENPYSLEICSGS 371
BLAST of mRNA_S-firma_F_contig10865.1154.1 vs. uniprot
Match: A0A1X2GPB4_9FUNG (B box-type domain-containing protein n=1 Tax=Hesseltinella vesiculosa TaxID=101127 RepID=A0A1X2GPB4_9FUNG) HSP 1 Score: 139 bits (349), Expect = 1.170e-34 Identity = 83/226 (36.73%), Postives = 130/226 (57.52%), Query Frame = 1
Query: 4 RVDVYTGRWGGSKARTIKDELRFALAALSGMMVAGDRNWGQKNADLLDTLEENQDAFAEIFEVGRRYKITNPEKFRDFYGKMMYMLQDA------QAQGRVDLVNDIKMVYDLVEDRGGLEMLHDERLVAATADISGISMTKAEVDDQVAAKNKARAELLKEYVSDSFSRGEVERVLDSIADANNYIAFNVAPVERTIDLLTKNFHPDKPEAEWSLKLSAGSSGRK 663
RVD+ + +KA+ I +++ LSG++V GD G + ++ +N+ F ++FEVGRRYKI NPEK R YGK+MYML D+ QA G V IK VY +++R GLE+LHD+ + AT +IS ++ +V ++ K + L K Y +D + ++ER L S++D ++Y+ N P ++ I LTK FHP+ E +SL ++AG G +
Sbjct: 139 RVDILSY---SNKAKRIVHQIKDVCYILSGLLVTGDYKLGAR-LFAENSTRDNEAFFQQVFEVGRRYKIMNPEKLRSNYGKLMYMLMDSVIPEVEQALG-FQCVVPIKTVYSFLKERQGLELLHDDHIALATREISPEFKSRDQVQAEIQRKRLSIDTLCKTYATDQLTVEDIERCLASLSDNHSYLKANRDPCDKMIKYLTKYFHPNTIETGYSLAITAGRHGHR 359
BLAST of mRNA_S-firma_F_contig10865.1154.1 vs. uniprot
Match: A0A2I1GDN2_9GLOM (Uncharacterized protein n=1 Tax=Rhizophagus irregularis TaxID=588596 RepID=A0A2I1GDN2_9GLOM) HSP 1 Score: 136 bits (342), Expect = 3.480e-34 Identity = 78/223 (34.98%), Postives = 131/223 (58.74%), Query Frame = 1
Query: 4 RVDVYTGRWGGSKARTIKDELRFALAALSGMMVAGDRNWGQKNADLLDTLEENQDAFAEIFEVGRRYKITNPEKFRDFYGKMMYMLQDA-----QAQGRVDLVNDIKMVYDLVEDRGGLEMLHDERLVAATADISGISMTKAEVDDQVAAKNKARAELLKEYVSDSFSRGEVERVLDSIADANNYIAFNVAPVERTIDLLTKNFHPDKPEAEWSLKLSAGSSG 657
++D+ + + SK R + +++ + LSG+MVA D GQ+ + + E+NQ+ F IFE+GRR+KI NPEK RD YGK+MYML D+ Q LV IK VY +++R GL +LH + + AT +I ++ +++ ++ +K +A L +++ +D+ ++ E++ L SI D + Y+ N ER L K F+P+K E +SL +S+G +G
Sbjct: 22 KIDIIS--YNSSKTRRMVHQIKDLCSILSGLMVASDYKKGQELI-INKSFEDNQEFFQRIFEIGRRHKIMNPEKMRDAYGKLMYMLMDSVIPDVQDMLSFSLVIPIKTVYSFLKERDGLGLLHHDLMAEATKEIIADGKSRPQINQEIRSKERAIEWLSRKFANDNLTQEEIKHCLYSIGDNHAYLRANRDCCERISQYLQKYFNPNKIEKGYSLAISSGRNG 241
BLAST of mRNA_S-firma_F_contig10865.1154.1 vs. uniprot
Match: A0A168LTG9_ABSGL (B box-type domain-containing protein n=1 Tax=Absidia glauca TaxID=4829 RepID=A0A168LTG9_ABSGL) HSP 1 Score: 138 bits (347), Expect = 3.910e-34 Identity = 80/226 (35.40%), Postives = 129/226 (57.08%), Query Frame = 1
Query: 4 RVDVYTGRWGGSKARTIKDELRFALAALSGMMVAGDRNWGQKNADLLDTLEENQDAFAEIFEVGRRYKITNPEKFRDFYGKMMYMLQDAQAQGRVDL------VNDIKMVYDLVEDRGGLEMLHDERLVAATADISGISMTKAEVDDQVAAKNKARAELLKEYVSDSFSRGEVERVLDSIADANNYIAFNVAPVERTIDLLTKNFHPDKPEAEWSLKLSAGSSGRK 663
R+D+ + +KA+ I +++ +SG++V+GD G + +++EN+ F +FEVGRRYKI NPEK R YGK+MYML D+ V+L V IK VYD +++ G +E+LHD+ + AT +IS T+ +V +++ K A L +Y +D S ++ER L S++D + ++ N P ER + L K + P K E+ +SL + AG G +
Sbjct: 168 RIDILSY---SNKAKRIVGQIKDICDVISGLLVSGDYKLGAR-LFAEQSIKENEVFFQRVFEVGRRYKIMNPEKMRSNYGKLMYMLMDSVIP-EVELALGFNCVIPIKTVYDFLKEHGAMELLHDDNIALATREISPEFKTQEQVQEEIQRKKAAIHTLCDQYSTDRISAQDIERCLSSLSDNHAFLKSNRDPCERMLKYLAKYYQPGKSESNYSLAIMAGRHGHR 388 The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10865.1154.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-firma_F_contig10865.1154.1 >prot_S-firma_F_contig10865.1154.1 ID=prot_S-firma_F_contig10865.1154.1|Name=mRNA_S-firma_F_contig10865.1154.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=223bp RRVDVYTGRWGGSKARTIKDELRFALAALSGMMVAGDRNWGQKNADLLDTback to top mRNA from alignment at S-firma_F_contig10865:444..4168+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-firma_F_contig10865.1154.1 ID=mRNA_S-firma_F_contig10865.1154.1|Name=mRNA_S-firma_F_contig10865.1154.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=3725bp|location=Sequence derived from alignment at S-firma_F_contig10865:444..4168+ (Sphaerotrichia firma ET2_F female)back to top Coding sequence (CDS) from alignment at S-firma_F_contig10865:444..4168+ >mRNA_S-firma_F_contig10865.1154.1 ID=mRNA_S-firma_F_contig10865.1154.1|Name=mRNA_S-firma_F_contig10865.1154.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=1338bp|location=Sequence derived from alignment at S-firma_F_contig10865:444..4168+ (Sphaerotrichia firma ET2_F female)back to top |