mRNA_S-firma_F_contig10862.1152.1 (mRNA) Sphaerotrichia firma ET2_F female
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Overview
Homology
BLAST of mRNA_S-firma_F_contig10862.1152.1 vs. uniprot
Match: A0A7S1CCF0_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CCF0_9STRA) HSP 1 Score: 415 bits (1067), Expect = 3.570e-142 Identity = 200/260 (76.92%), Postives = 228/260 (87.69%), Query Frame = 1
Query: 22 RFASYCLTEPNSGSDAASLSTKAVRDGDHYVVNGSKAFISGGSRSDAYIIMVRTGGPGPSGVSCLVVENGTPGLSFGAQERKLGWNTQPTAAVILEDCRVPVANRLGEEGDGFTIAMKGLDGGRISIGTCSVGAASTCFSLARDHVLVRKQFGAPLAHNQHVAFKVNDMATDLVTARMLIRQAAAMLDDKHPNARAFCAMAKRVATDSGFNICNDALQLHGGYGYLKDYPVERFLRDVRVHQILEGTNEIMRHIVSRQLL 801
+F+SYCLTEPN+GSDA+ L+TKAVRDGD YV+NGSKAFISGG RSD Y+IM RTGG GP+GVSC +VENGT GLSFGAQERKLGWNTQPTA VILED RVP +N +G EG+GF IAM+GLDGGR+SIGTCSVGAAS CF AR+HV VR+QFG PL+ NQH+ FK+ DMATDL T+RM++RQ A +LD KH NARAFCAMAKRVATD F +CNDALQLHGGYGYL DYP+ER+LRDVRVHQILEGTNEIMR I+SR+LL
Sbjct: 179 KFSSYCLTEPNAGSDASGLATKAVRDGDDYVLNGSKAFISGGGRSDVYLIMARTGGDGPAGVSCFLVENGTKGLSFGAQERKLGWNTQPTAMVILEDVRVPASNLIGGEGNGFKIAMRGLDGGRLSIGTCSVGAASACFHHAREHVTVRQQFGKPLSANQHIQFKLADMATDLQTSRMMVRQGARLLDAKHDNARAFCAMAKRVATDLCFGVCNDALQLHGGYGYLMDYPIERYLRDVRVHQILEGTNEIMRLILSRELL 438
BLAST of mRNA_S-firma_F_contig10862.1152.1 vs. uniprot
Match: A0A812Z3I9_9DINO (Acad8 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812Z3I9_9DINO) HSP 1 Score: 410 bits (1053), Expect = 2.650e-141 Identity = 197/262 (75.19%), Postives = 229/262 (87.40%), Query Frame = 1
Query: 19 QRFASYCLTEPNSGSDAASLSTKAVRDGDHYVVNGSKAFISGGSRSDAYIIMVRTGGPGPSGVSCLVVENGTPGLSFGAQERKLGWNTQPTAAVILEDCRVPVANRLGEEGDGFTIAMKGLDGGRISIGTCSVGAASTCFSLARDHVLVRKQFGAPLAHNQHVAFKVNDMATDLVTARMLIRQAAAMLDDKHPNARAFCAMAKRVATDSGFNICNDALQLHGGYGYLKDYPVERFLRDVRVHQILEGTNEIMRHIVSRQLLA 804
++F+SYCLTEP SGSDAASLST+AVRDGD YV+NG K FISGG RSD Y+IM RTGG GPSG+SC++V + GLSFGAQE+KLGWNTQPTAAV LED RVPVANRLGEEGDGF IAMKGLDGGR+SIGTCS+GAA+ CF +AR++V RKQFG PL +NQ +AF+++DMATDL +R++IRQ A +LD K PNARAF AMAK+V+TD GF ICN+ALQLHGGYGYLKDYP+ER+LRDVRVHQILEGTNEIMR I+SRQL A
Sbjct: 94 EKFSSYCLTEPGSGSDAASLSTRAVRDGDDYVLNGQKMFISGGGRSDVYVIMARTGGEGPSGISCILVPSDAKGLSFGAQEKKLGWNTQPTAAVFLEDVRVPVANRLGEEGDGFKIAMKGLDGGRLSIGTCSLGAAAKCFDIAREYVKTRKQFGKPLINNQALAFRLSDMATDLQLSRLMIRQGAKLLDAKDPNARAFAAMAKQVSTDLGFKICNEALQLHGGYGYLKDYPIERYLRDVRVHQILEGTNEIMRVIISRQLAA 355
BLAST of mRNA_S-firma_F_contig10862.1152.1 vs. uniprot
Match: A0A5J6N0Q2_9PROT (Acyl-CoA dehydrogenase n=1 Tax=Hypericibacter adhaerens TaxID=2602016 RepID=A0A5J6N0Q2_9PROT) HSP 1 Score: 393 bits (1009), Expect = 3.240e-134 Identity = 192/261 (73.56%), Postives = 216/261 (82.76%), Query Frame = 1
Query: 22 RFASYCLTEPNSGSDAASLSTKAVRDGDHYVVNGSKAFISGGSRSDAYIIMVRTGGPGPSGVSCLVVENGTPGLSFGAQERKLGWNTQPTAAVILEDCRVPVANRLGEEGDGFTIAMKGLDGGRISIGTCSVGAASTCFSLARDHVLVRKQFGAPLAHNQHVAFKVNDMATDLVTARMLIRQAAAMLDDKHPNARAFCAMAKRVATDSGFNICNDALQLHGGYGYLKDYPVERFLRDVRVHQILEGTNEIMRHIVSRQLLA 804
+ ASYCLTEP SGSDAA+L T+A R GDHY++NG+KAFISGG RSD Y+ MVRTG GP G+SCLV+E GTPGLSFG QERKLGWN QPTA VI E+ RVPVANRLGEEG GF+IAM GLDGGRI+IG CS+GAA C LAR+HV RKQFG PL Q V FK+ DMAT+L AR++IR AAA LD K P A A+CAMAKR ATD+GF ICN+ALQLHGGYGYLKDYPVERFLRD RVHQILEGTNEIMR IV+R+L+A
Sbjct: 118 KIASYCLTEPGSGSDAAALKTRAERQGDHYILNGTKAFISGGGRSDLYVCMVRTGAEGPKGISCLVIEKGTPGLSFGKQERKLGWNAQPTAMVIFENARVPVANRLGEEGQGFSIAMGGLDGGRINIGACSLGAARACLELAREHVATRKQFGHPLNEFQSVQFKLADMATELEAARLMIRGAAARLDAKDPEATAYCAMAKRFATDAGFAICNEALQLHGGYGYLKDYPVERFLRDARVHQILEGTNEIMRVIVARRLMA 378
BLAST of mRNA_S-firma_F_contig10862.1152.1 vs. uniprot
Match: A0A7S2XV87_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XV87_9STRA) HSP 1 Score: 387 bits (993), Expect = 2.970e-133 Identity = 184/261 (70.50%), Postives = 221/261 (84.67%), Query Frame = 1
Query: 22 RFASYCLTEPNSGSDAASLSTKAVRDGDHYVVNGSKAFISGGSRSDAYIIMVRTGGPGPSGVSCLVVENGTPGLSFGAQERKLGWNTQPTAAVILEDCRVPVANRLGEEGDGFTIAMKGLDGGRISIGTCSVGAASTCFSLARDHVLVRKQFGAPLAHNQHVAFKVNDMATDLVTARMLIRQAAAMLDDKHPNARAFCAMAKRVATDSGFNICNDALQLHGGYGYLKDYPVERFLRDVRVHQILEGTNEIMRHIVSRQLLA 804
+FASYCLTEPNSGSDAASLST+AVR+GD+Y++NGSKAFISGG SD Y++MVRTG GP+G++ L+V+ TPGLSFGA E K+GW QPTAAVI EDC VP++NRLG+EGDGF IAM+GL+GGRISI TCSVG A C AR+++L RKQFG+PLA+NQ++ FK+ DMATDL +R+++R AAA+LD K PNA CAMAKR ATD GF+ICN ALQ+HGGYGYLKDYPVERF+RD+RVH ILEGTNEIMR I+SR LL
Sbjct: 24 KFASYCLTEPNSGSDAASLSTRAVREGDNYILNGSKAFISGGGVSDVYLVMVRTGDEGPTGITSLLVDKDTPGLSFGANESKMGWKNQPTAAVIFEDCPVPISNRLGDEGDGFKIAMRGLNGGRISIATCSVGGAQACLEHARNYLLERKQFGSPLANNQYLQFKLADMATDLSASRLMVRNAAALLDAKDPNATVACAMAKRFATDKGFDICNYALQMHGGYGYLKDYPVERFVRDLRVHSILEGTNEIMRLIISRNLLG 284
BLAST of mRNA_S-firma_F_contig10862.1152.1 vs. uniprot
Match: A0A0N1LMD8_9PROT (Acyl-CoA dehydrogenase n=3 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A0N1LMD8_9PROT) HSP 1 Score: 386 bits (992), Expect = 1.120e-131 Identity = 182/261 (69.73%), Postives = 218/261 (83.52%), Query Frame = 1
Query: 22 RFASYCLTEPNSGSDAASLSTKAVRDGDHYVVNGSKAFISGGSRSDAYIIMVRTGGPGPSGVSCLVVENGTPGLSFGAQERKLGWNTQPTAAVILEDCRVPVANRLGEEGDGFTIAMKGLDGGRISIGTCSVGAASTCFSLARDHVLVRKQFGAPLAHNQHVAFKVNDMATDLVTARMLIRQAAAMLDDKHPNARAFCAMAKRVATDSGFNICNDALQLHGGYGYLKDYPVERFLRDVRVHQILEGTNEIMRHIVSRQLLA 804
+FASYCLTEP +GSDAASL T+A RDGDHYV+NGSKAFISGG SD Y++MVRTGGPGP G+SCLVVE GTPGLSFG QE+K+GWN+QPTA VI EDCRVPVANRLG EGDGF IAMKGLDGGR++I +CS+G A C + AR+H+ VR+QFG L+ Q + FK DMAT+L AR+++ + AA LD HP+A +CAMAKR ATD+GF + NDALQLHGGYGY+++YPVER LRD+RVHQILEGTNEIMR I++R+LL
Sbjct: 118 KFASYCLTEPGAGSDAASLRTRAERDGDHYVLNGSKAFISGGGASDIYVVMVRTGGPGPKGISCLVVEKGTPGLSFGKQEKKMGWNSQPTAQVIFEDCRVPVANRLGAEGDGFKIAMKGLDGGRLNIASCSLGGARACLNAAREHMEVRQQFGKKLSEFQALQFKFADMATELEAARLMVHRGAAALDAGHPDATLYCAMAKRFATDAGFTVANDALQLHGGYGYIREYPVERILRDLRVHQILEGTNEIMRVIIARRLLG 378
BLAST of mRNA_S-firma_F_contig10862.1152.1 vs. uniprot
Match: W9H316_9PROT (Acyl-CoA dehydrogenase n=5 Tax=Skermanella TaxID=204447 RepID=W9H316_9PROT) HSP 1 Score: 385 bits (990), Expect = 2.180e-131 Identity = 183/262 (69.85%), Postives = 219/262 (83.59%), Query Frame = 1
Query: 19 QRFASYCLTEPNSGSDAASLSTKAVRDGDHYVVNGSKAFISGGSRSDAYIIMVRTGGPGPSGVSCLVVENGTPGLSFGAQERKLGWNTQPTAAVILEDCRVPVANRLGEEGDGFTIAMKGLDGGRISIGTCSVGAASTCFSLARDHVLVRKQFGAPLAHNQHVAFKVNDMATDLVTARMLIRQAAAMLDDKHPNARAFCAMAKRVATDSGFNICNDALQLHGGYGYLKDYPVERFLRDVRVHQILEGTNEIMRHIVSRQLLA 804
+ FASYCLTEP +GSDAASL T+A RDGDHYV+NGSKAFISGG +D Y++MVRTG PGP G+SC+VVE GTPGLSFG +ERKLGWN+QPTAAVI +DCRVPVANRLG EGDGF IAMKGLDGGR++I CS+G A C LARDH+ VR+QFG LA Q + F++ DMAT+L AR+++ + AA LDD A +CAMAKR ATD+GF ICN+ALQLHGGYGY+++YPVER+LRDVRVHQILEGTNEIMR I++R+LL+
Sbjct: 117 EHFASYCLTEPGAGSDAASLKTRAERDGDHYVLNGSKAFISGGGVADIYVVMVRTGEPGPKGISCVVVEKGTPGLSFGKKERKLGWNSQPTAAVIFDDCRVPVANRLGAEGDGFRIAMKGLDGGRLNISACSLGGARACLELARDHMNVRQQFGRKLADFQALQFRLADMATELEAARLMVHRGAAKLDDGGSEATLYCAMAKRFATDAGFKICNEALQLHGGYGYIREYPVERYLRDVRVHQILEGTNEIMRLIIARRLLS 378
BLAST of mRNA_S-firma_F_contig10862.1152.1 vs. uniprot
Match: A0A2E5PQH2_9PROT (Acyl-CoA dehydrogenase n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E5PQH2_9PROT) HSP 1 Score: 384 bits (985), Expect = 1.380e-130 Identity = 177/262 (67.56%), Postives = 216/262 (82.44%), Query Frame = 1
Query: 19 QRFASYCLTEPNSGSDAASLSTKAVRDGDHYVVNGSKAFISGGSRSDAYIIMVRTGGPGPSGVSCLVVENGTPGLSFGAQERKLGWNTQPTAAVILEDCRVPVANRLGEEGDGFTIAMKGLDGGRISIGTCSVGAASTCFSLARDHVLVRKQFGAPLAHNQHVAFKVNDMATDLVTARMLIRQAAAMLDDKHPNARAFCAMAKRVATDSGFNICNDALQLHGGYGYLKDYPVERFLRDVRVHQILEGTNEIMRHIVSRQLLA 804
+ FASYCLTEP +GSDAASL TKAV DGDHYV+NG+KAFISGGS SD Y+ MVRTGG GPSG+SCLVVE PGLSFG +E KLGWN+QPTAAVI EDCRVP ANR+GEEGDGF IAM GLDGGR+++ CS+G A C AR H++ R+QFG P+A Q + FK+ DMAT++ AR+++R+AA LD HP A +CAMAKR ATD+GF +CN+ALQ+HGGYGY+K+YP++R++RDVRVHQILEGTNEIMR I++R+LL
Sbjct: 120 KHFASYCLTEPGAGSDAASLQTKAVLDGDHYVLNGTKAFISGGSTSDVYVCMVRTGGEGPSGISCLVVEKDAPGLSFGKKEAKLGWNSQPTAAVIFEDCRVPAANRIGEEGDGFKIAMMGLDGGRLNVAACSIGGARVCMEAARSHMIQRRQFGRPIADFQALQFKLADMATEIEAARLMVRRAAGALDAGHPEATQYCAMAKRFATDTGFQVCNEALQIHGGYGYIKEYPIQRYMRDVRVHQILEGTNEIMRVIIARRLLC 381
BLAST of mRNA_S-firma_F_contig10862.1152.1 vs. uniprot
Match: A0A5J6MJG0_9PROT (Acyl-CoA dehydrogenase n=1 Tax=Hypericibacter terrae TaxID=2602015 RepID=A0A5J6MJG0_9PROT) HSP 1 Score: 384 bits (985), Expect = 1.430e-130 Identity = 187/261 (71.65%), Postives = 216/261 (82.76%), Query Frame = 1
Query: 22 RFASYCLTEPNSGSDAASLSTKAVRDGDHYVVNGSKAFISGGSRSDAYIIMVRTGGPGPSGVSCLVVENGTPGLSFGAQERKLGWNTQPTAAVILEDCRVPVANRLGEEGDGFTIAMKGLDGGRISIGTCSVGAASTCFSLARDHVLVRKQFGAPLAHNQHVAFKVNDMATDLVTARMLIRQAAAMLDDKHPNARAFCAMAKRVATDSGFNICNDALQLHGGYGYLKDYPVERFLRDVRVHQILEGTNEIMRHIVSRQLLA 804
+ ASYCLTEP SGSDAA+L T+AVR+GDHY++NG KAFISG RSD Y+ MVRTG GP G+SCL++E GTPGLSFG QERKLGWN+QPTA +I E+ RVPVANRLGEEG GF+IAM GLDGGRI+IG CS+GAA TC LAR+HV RKQFG L Q V FK+ DMAT+L AR++IR AAA LD K P A + AMAKR ATD+GF ICN+ALQLHGGYGYLKDYP+ERFLRDVRVHQILEGTNEIMR I++R+L+A
Sbjct: 118 KIASYCLTEPGSGSDAAALKTRAVREGDHYLLNGGKAFISGADRSDLYVCMVRTGVDGPKGISCLMIEKGTPGLSFGKQERKLGWNSQPTAMLIFENARVPVANRLGEEGQGFSIAMGGLDGGRINIGACSLGAARTCLELAREHVASRKQFGHALNEFQSVQFKLADMATELEAARLMIRSAAARLDAKDPEATVYSAMAKRFATDAGFAICNEALQLHGGYGYLKDYPIERFLRDVRVHQILEGTNEIMRVIIARRLMA 378
BLAST of mRNA_S-firma_F_contig10862.1152.1 vs. uniprot
Match: A0A3M1JTY6_9PROT (Acyl-CoA dehydrogenase n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A3M1JTY6_9PROT) HSP 1 Score: 382 bits (981), Expect = 5.060e-130 Identity = 187/261 (71.65%), Postives = 217/261 (83.14%), Query Frame = 1
Query: 19 QRFASYCLTEPNSGSDAASLSTKAVRDGDHYVVNGSKAFISGGSRSDAYIIMVRTGGPGPSGVSCLVVENGTPGLSFGAQERKLGWNTQPTAAVILEDCRVPVANRLGEEGDGFTIAMKGLDGGRISIGTCSVGAASTCFSLARDHVLVRKQFGAPLAHNQHVAFKVNDMATDLVTARMLIRQAAAMLDDKHPNARAFCAMAKRVATDSGFNICNDALQLHGGYGYLKDYPVERFLRDVRVHQILEGTNEIMRHIVSRQLL 801
+ FASYCLTEP +GSDAASL T+AVRDGDHYV+NGSKAFISGG SD Y++MVRTG GP G+S LVVEN TPGLSFGAQE+KLGW +QPT+AVI EDCRVPVANRLGEEGDGF IAM GLDGGR++IG CS+GAA C A +V RKQFG PLA Q + FK+ DMAT+L AR+L+ +AAA LD K P+A +CAMAKR ATD GFN+ N+ALQLHGGYGYL+DYP+ERF RD+RVHQILEGTNEIMR I++R+LL
Sbjct: 117 EHFASYCLTEPGAGSDAASLKTRAVRDGDHYVLNGSKAFISGGGSSDIYVVMVRTGEDGPKGISTLVVENDTPGLSFGAQEKKLGWKSQPTSAVIFEDCRVPVANRLGEEGDGFKIAMMGLDGGRLNIGACSLGAARRCLEEALAYVQDRKQFGKPLAAFQALQFKLADMATELEAARLLLHKAAAKLDAKAPDATQYCAMAKRYATDVGFNVVNEALQLHGGYGYLRDYPIERFFRDLRVHQILEGTNEIMRVIIARKLL 377
BLAST of mRNA_S-firma_F_contig10862.1152.1 vs. uniprot
Match: I3TKC3_TISMK (Acyl-CoA dehydrogenase domain-containing protein n=6 Tax=Tistrella TaxID=171436 RepID=I3TKC3_TISMK) HSP 1 Score: 382 bits (980), Expect = 8.210e-130 Identity = 186/261 (71.26%), Postives = 213/261 (81.61%), Query Frame = 1
Query: 19 QRFASYCLTEPNSGSDAASLSTKAVRDGDHYVVNGSKAFISGGSRSDAYIIMVRTGGPGPSGVSCLVVENGTPGLSFGAQERKLGWNTQPTAAVILEDCRVPVANRLGEEGDGFTIAMKGLDGGRISIGTCSVGAASTCFSLARDHVLVRKQFGAPLAHNQHVAFKVNDMATDLVTARMLIRQAAAMLDDKHPNARAFCAMAKRVATDSGFNICNDALQLHGGYGYLKDYPVERFLRDVRVHQILEGTNEIMRHIVSRQLL 801
+ FASYCLTEP +GSDAASL T+AVRDGDHYV+NGSKAFISGG RSD Y++MVRTGG GP G+S LVVE TPGLSFGA ERKLGWN+QPTAAVI EDCRVPV NRLGEEGDGF IAM GLDGGRI+IG CS+GAA AR++V R+QFG LA Q F++ DM T+L AR++IR+AA LD +HP A CA AKR ATD+GF ICN+ALQLHGGYGYL DYP+ER+LRD RVHQILEGTNEIMR I++R+LL
Sbjct: 117 EHFASYCLTEPGAGSDAASLRTRAVRDGDHYVLNGSKAFISGGGRSDIYVVMVRTGGDGPKGISTLVVEKDTPGLSFGANERKLGWNSQPTAAVIFEDCRVPVENRLGEEGDGFKIAMMGLDGGRINIGACSIGAARASLDAAREYVQGRQQFGKALAEFQATQFRLADMMTELEAARLMIRRAAWSLDSQHPEKTAICASAKRFATDAGFRICNEALQLHGGYGYLMDYPIERYLRDARVHQILEGTNEIMRVIIARRLL 377 The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10862.1152.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-firma_F_contig10862.1152.1 >prot_S-firma_F_contig10862.1152.1 ID=prot_S-firma_F_contig10862.1152.1|Name=mRNA_S-firma_F_contig10862.1152.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=269bp PPPPLPQRFASYCLTEPNSGSDAASLSTKAVRDGDHYVVNGSKAFISGGSback to top mRNA from alignment at S-firma_F_contig10862:3983..4887- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-firma_F_contig10862.1152.1 ID=mRNA_S-firma_F_contig10862.1152.1|Name=mRNA_S-firma_F_contig10862.1152.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=905bp|location=Sequence derived from alignment at S-firma_F_contig10862:3983..4887- (Sphaerotrichia firma ET2_F female)back to top Coding sequence (CDS) from alignment at S-firma_F_contig10862:3983..4887- >mRNA_S-firma_F_contig10862.1152.1 ID=mRNA_S-firma_F_contig10862.1152.1|Name=mRNA_S-firma_F_contig10862.1152.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=1614bp|location=Sequence derived from alignment at S-firma_F_contig10862:3983..4887- (Sphaerotrichia firma ET2_F female)back to top |