mRNA_S-firma_F_contig1086.1148.1 (mRNA) Sphaerotrichia firma ET2_F female
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Overview
Homology
BLAST of mRNA_S-firma_F_contig1086.1148.1 vs. uniprot
Match: D7G4F2_ECTSI (5'-3' exoribonuclease n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4F2_ECTSI) HSP 1 Score: 1078 bits (2789), Expect = 0.000e+0 Identity = 596/720 (82.78%), Postives = 617/720 (85.69%), Query Frame = 1
Query: 49 MGVPAFYRWLSEKYPKIVVDMLEDRPVRVEGTEIPLDLTAANPNGIEFDNLYIDMNGIIHPCSHPEDKPPPASEEEMYKNIMDYVDRLFSAVRPRRLLYLAIDGVAPRAKMNQQRSRRFRSAQEAEEAAELMEETRQAMKEMGMKVPPKAKPAWDSNIITPGTEFMHKLSRYLRFYVQDRVNRDKAWQNIKVILSDASEPGEGEHKIMDFVRRQRNQPGYDPNQHHILHGLDADLIMLGLATHERSFTILREQVLFGRQQKEASERKTAAMNAARDALAGVGQKAKRGEHGEHDGDVSPNKPLQMLQLWTLREYLENEFRELEAPGRVPFGYDFERVVDDFVFLCFFVGNDFLPHLPSLGIRDGALDYLFNVYKRVISSLGDYLTANGGRVNLKQVDVIMSEVGEIEDEVFKRRKQAEVKDQAWRNRSGGRGXXXXXXXXXXXXXXDRGGAGLGFANGADAGRYGSGXXXXXXXXXQQGLTTSRADKKKAASKAKETAKASDDSIKNQAVPIGSVKTDRLKDAKRRLEDGGQRGGAAWGGGDVGNTAEGGAGAAPEDANNFLCRRDCDSGDHRCGCSGVGQAGGRSQXXXXXXXXXXXXXXEFL-------DMTEEEIVQAKSVLKDKVKDQSQALLDEARNSVDDKVRLWEDGWKDRYYADKCKLEDIEGGGGRERLFQTYVEGLCWVMLYYYQGCPSWTWYFPFHYAPFASDLINCDR 2187
MGVPAFYRWLSEKYPKIVVDMLED RVEGTEIPLDLTA NPNGIEFDNLYIDMNGIIHPCSHPEDKPPP SEEEMYKNIMDY+DRLFSAVRPRRLLYLAIDGVAPRAKMNQQRSRRFRSAQEAEEAAELMEETRQAMKEMG+KVPPKAKPAWDSNIITPGTEFMHKLSRYLRFYVQDRVNRDKAWQNIKVILSDASEPGEGEHKIMDFVRRQR QPGYDPNQHHILHGLDADLIMLGLATHERSFTILREQVLFGRQQKEASERK AAMNAARDALAGVGQKAKRGEHGEHDGDVSP+KPLQMLQLWTLREYLENEF+ELEAPGRVPFGYDFERVVDDFVFLCFFVGNDFLPHLPSLGIRDGALDYLFNVYKRVISSLGDYLTA+GGRVNLKQVDVIMSEVGEIEDEVFKRRKQAEVKDQA R+ G RG XXXXXXXXXX R G G G XXX S ++++KA+ +AK+TAKASDDSIK QAVPIGSVKTDRLKDAKRRLEDGGQRGGA W G A EDAN F + R G GG XXXXXXXXX X DMTEEE+ +AK++LKDKVKDQ+Q LLDEAR+SV+D VRLWEDGWKDRYY DKCKLEDIEGGGGRERLFQTYVEGLCWVMLYYYQGCPSWTWYFPFHYAPFASDLINCDR
Sbjct: 1 MGVPAFYRWLSEKYPKIVVDMLEDHAARVEGTEIPLDLTAENPNGIEFDNLYIDMNGIIHPCSHPEDKPPPESEEEMYKNIMDYIDRLFSAVRPRRLLYLAIDGVAPRAKMNQQRSRRFRSAQEAEEAAELMEETRQAMKEMGVKVPPKAKPAWDSNIITPGTEFMHKLSRYLRFYVQDRVNRDKAWQNIKVILSDASEPGEGEHKIMDFVRRQRTQPGYDPNQHHILHGLDADLIMLGLATHERSFTILREQVLFGRQQKEASERKAAAMNAARDALAGVGQKAKRGEHGEHDGDVSPHKPLQMLQLWTLREYLENEFKELEAPGRVPFGYDFERVVDDFVFLCFFVGNDFLPHLPSLGIRDGALDYLFNVYKRVISSLGDYLTASGGRVNLKQVDVIMSEVGEIEDEVFKRRKQAEVKDQAKRSSFGRRGGGXXXXXXXXXXDMGRQGVG------PPGGNSXXXXXXDGEKQRMYPPANSASERRKASLEAKKTAKASDDSIKVQAVPIGSVKTDRLKDAKRRLEDGGQRGGAKWXXXXXXXXXX--KGGAAEDANKFFSIAKLE----RPISGGAAVEGGXXXXXXXXXXXXDGEDXXXXXXXXXXPDMTEEEMARAKTMLKDKVKDQTQVLLDEARDSVNDTVRLWEDGWKDRYYHDKCKLEDIEGGGGRERLFQTYVEGLCWVMLYYYQGCPSWTWYFPFHYAPFASDLINCDR 708
BLAST of mRNA_S-firma_F_contig1086.1148.1 vs. uniprot
Match: A0A6H5JF35_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF35_9PHAE) HSP 1 Score: 1049 bits (2712), Expect = 0.000e+0 Identity = 596/791 (75.35%), Postives = 621/791 (78.51%), Query Frame = 1
Query: 49 MGVPAFYRWLSEKYPKIVVDMLEDRPVRVEGTEIPLDLTAANPNGIEFDNLYIDMNGIIHPCSHPEDKPPPASEEEMYKNIMDYVDRLFSAVRPRRLLYLAIDGVAPRAKMNQQRSRRFRSAQEAEEAAELMEETRQAMKEMGMKVPPKAKPAWDSNIITPGTEFMHKLSRYLRFYVQDRVNRDKAWQNIKVILSDASEPGEGEHKIMDFVRRQRNQPGYDPNQHHILHGLDADLIMLGLATHERSFTILREQVLFGRQQKEASERKTAAMNAARDALAGVGQKAKRGEHGEHDGDVSPNKPLQMLQLWTLREYLENEFRELEAPGRVPFGYDFERVVDDFVFLCFFVGNDFLPHLPSLGIRDGALDYLFNVYKRVISSLGDYLTANGGRVNLKQVDVIMSEVGEIEDEVFKRRKQAEVKDQAWRNRSGGRGXXXXXXXXXXXXXXDRGGAGLGFANGADAGRYGSGXXXXXXXXXQQGLTTSRADKKKAASKAKETAKASDDSIKNQAVPIGSVKTDRLKDAKRRLEDGGQRGGAAWG------------GGDVGNTAEGG-------------------------AGAAPEDANNFLCRRDCDSGDHRCGCSGVGQAGGRSQXXXXXXXXXXXXXXEFLD-----------------------------------------MTEEEIVQAKSVLKDKVKDQSQALLDEARNSVDDKVRLWEDGWKDRYYADKCKLEDIEGGGGRERLFQTYVEGLCWVMLYYYQGCPSWTWYFPFHYAPFASDLINCDR 2187
MGVPAFYRWLSEKYPKIVVDMLED RV+GTEIPLDLTA NPNGIEFDNLYIDMNGIIHPCSHPEDKPPP SEEEMYKNIMDY+DRLFSAVRPRRLLYLAIDGVAPRAKMNQQRSRRFRSAQEAEEAAELMEETRQAMKEMGMKVPPKAKPAWDSNIITPGTEFMHKLSRYLRFYVQDRVNRDKAWQNIKVILSDASEPGEGEHKIMDFVRRQR QPGYDPNQHHILHGLDADLIMLGLATHERSFTILREQVLFGRQQKEASERK AAMNAARDALAGVGQKAKRGEHGEHDGDVSP+KPLQMLQLWTLREYLENEF+ELEAPGRVPFGYDFERVVDDFVFLCFFVGNDFLPHLPSLGIRDGALDYLFNVYKRVISSLGDYLTA+GGRVNLKQVDVIMSEVGEIEDEVFKRRKQAEVKDQA R+ G RG XXXXXXXXXX D G G+G G GRYG S ++++KA+ +AK+TAKASDDSIK QAVPIGSVKTDRLKDAKRRLEDGGQRGGA W + N + +GAA D+ G G XXXXXXXXXXXXXX MTEEE+ +AK++LKDKVKDQ+Q LLDEAR+SV+D VRLWEDGWKDRYY DKCKLEDIEGGGGRERLFQ YVEGLCWVMLYYYQGCPSWTWYFPFHYAPFASDLINCDR
Sbjct: 1 MGVPAFYRWLSEKYPKIVVDMLEDHAARVDGTEIPLDLTAENPNGIEFDNLYIDMNGIIHPCSHPEDKPPPESEEEMYKNIMDYIDRLFSAVRPRRLLYLAIDGVAPRAKMNQQRSRRFRSAQEAEEAAELMEETRQAMKEMGMKVPPKAKPAWDSNIITPGTEFMHKLSRYLRFYVQDRVNRDKAWQNIKVILSDASEPGEGEHKIMDFVRRQRTQPGYDPNQHHILHGLDADLIMLGLATHERSFTILREQVLFGRQQKEASERKAAAMNAARDALAGVGQKAKRGEHGEHDGDVSPHKPLQMLQLWTLREYLENEFKELEAPGRVPFGYDFERVVDDFVFLCFFVGNDFLPHLPSLGIRDGALDYLFNVYKRVISSLGDYLTASGGRVNLKQVDVIMSEVGEIEDEVFKRRKQAEVKDQAQRSSFGRRGGGXXXXXXXXXX--DMGRQGVGPPGGNSGGRYG----VDGEKQRMYPPANSASERRKASMEAKKTAKASDDSIKVQAVPIGSVKTDRLKDAKRRLEDGGQRGGAKWXXXXXXXXXXXXXAAEHANKSAAAKLREKLXXXXXXXXXXXXXXXXXQKSGAASSDSXXXXXXXXXXXXXXXXXXXXXGGEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMTEEEMARAKTMLKDKVKDQAQVLLDEARDSVNDTVRLWEDGWKDRYYQDKCKLEDIEGGGGRERLFQAYVEGLCWVMLYYYQGCPSWTWYFPFHYAPFASDLINCDR 785
BLAST of mRNA_S-firma_F_contig1086.1148.1 vs. uniprot
Match: A0A4D9CT15_9STRA (5'-3' exoribonuclease n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CT15_9STRA) HSP 1 Score: 619 bits (1595), Expect = 4.450e-209 Identity = 370/770 (48.05%), Postives = 463/770 (60.13%), Query Frame = 1
Query: 49 MGVPAFYRWLSEKYPKIVVDMLEDRPVRVEGTEIPLDLTAANPNGIEFDNLYIDMNGIIHPCSHPEDKPPPASEEEMYKNIMDYVDRLFSAVRPRRLLYLAIDGVAPRAKMNQQRSRRFRSAQEAEEAAELMEETRQAMKEMGMKVPPKA-KPAWDSNIITPGTEFMHKLSRYLRFYVQDRVNRDKAWQNIKVILSDASEPGEGEHKIMDFVRRQRNQPGYDPNQHHILHGLDADLIMLGLATHERSFTILREQVLFGRQQKEASERKTAAMNAARDALAGVGQKAKRGEHGEHDGDVSPNKPLQMLQLWTLREYLENEFRELEAPGRVPFGYDFERVVDDFVFLCFFVGNDFLPHLPSLGIRDGALDYLFNVYKRVISSLGDYLTANGGRVNLKQVDVIMSEVGEIEDEVFKRRKQAEVKDQAWRNRSGGRGXXXXXXXXXXXXXXDRGGAGLGFANGADAGRYGSGXXXXXXXXXQQGLTTSRADKKKAASKAKETAKASDDSIKNQAVPIGSVKTDRLKDAKRRLEDG--GQRGGAAWGGGDVGNTAEGGA-------------------GAAP------EDANNFLCRRDCDSGDHRCGCSGVGQA---------------GGRSQXXXXXXXXXXXXXXEFLDMTE--------------EEIVQAKSVLKDKVKDQSQALLDEARNSVDDKVRLWEDGWKDRYYADKCKLEDIEGGGGRERLFQTYVEGLCWVMLYYYQGCPSWTWYFPFHYAPFASDLINCDR 2187
MGVPAF+RWLSEKYP+ V+DM+E RP V+G +P+DL A NPN +EFDNLYIDMNGIIHPCSHPED+P P +E EM+ N+M YVDR+F+AVRPRRL++LAIDGVAPRAKMNQQR+RRFRSA +A E E+ TRQ M EMG+ VPP+ WDSN+ITPGTEFM L+ YLRFYV RVN KAWQ +KV+ SD SEPGEGEHKIMDF+R++R QPGYDPN HILHGLDADLIML LATHE FTILREQV FGR+ ++ + +A +A DA+ GQKA G KP QML + TLREYLE EFR L +PFGY+FERVVDDFVFLCFFVGNDFLPHLPSL IRDGA+D+L NVYKRV+ ++GDYLTA GG VNL+QVD+I++EVG +EDEVF+RR+ E + QA NR A + A+ GR A + ++KN++V ++LK KR LE+G G GG +G+ E G GA P ED+N + D + +G + G + E D E E+ A+ L ++VK + +A LD + ++D +R E GWKDRYY +K K +++E GGGRE +++TY+EGLCWV YYY+GC +W W++PFHYAPFASDL+N +R
Sbjct: 1 MGVPAFFRWLSEKYPRTVLDMVEQRPQVVDGVPLPMDLRAPNPNNMEFDNLYIDMNGIIHPCSHPEDRPTPKTEAEMFVNVMVYVDRIFAAVRPRRLVFLAIDGVAPRAKMNQQRTRRFRSAGDARERHEIKVATRQEMVEMGLPVPPEELDKEWDSNVITPGTEFMVTLASYLRFYVAHRVNTCKAWQQVKVLFSDGSEPGEGEHKIMDFIRKERAQPGYDPNTRHILHGLDADLIMLALATHEPHFTILREQVFFGRRGRDGPQ--VSAAQSAFDAM--QGQKADDGLARGEGSRFPYLKPFQMLHIPTLREYLEEEFRSLRD---LPFGYNFERVVDDFVFLCFFVGNDFLPHLPSLDIRDGAIDFLLNVYKRVLPAMGDYLTAPGGTVNLEQVDIILAEVGRVEDEVFRRRRAGEEQHQARLNRR------VREVERRHGGTVQELSARIVPADVQPLGRPKLPHPVPRLSPMASPFLP-----------APPGPSPEEKNMKNKSV--AQQLREKLKKPKRELENGVAGVEGGPEASDAPIGDDCEAGMKHELDHTTKMETPIIEACDGAKPVKRVKTEDSNIMDDKTDLVILKEPGSVTALGMSVEVCLETTTSAQDSQEGTKEVEEDEEDVGDDAMGEEEDKEEFEDPHIVVPPELEGTELAAAQKELAERVKSKQEARLDRLKEEIEDTIRYHEAGWKDRYYQNKLKKQNLEKGGGREHMYRTYIEGLCWVFQYYYRGCQAWGWFYPFHYAPFASDLVNIER 744
BLAST of mRNA_S-firma_F_contig1086.1148.1 vs. uniprot
Match: W7TMF7_9STRA (5'-3' exoribonuclease n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TMF7_9STRA) HSP 1 Score: 620 bits (1598), Expect = 5.850e-205 Identity = 368/768 (47.92%), Postives = 465/768 (60.55%), Query Frame = 1
Query: 49 MGVPAFYRWLSEKYPKIVVDMLEDRPVRVEGTEIPLDLTAANPNGIEFDNLYIDMNGIIHPCSHPEDKPPPASEEEMYKNIMDYVDRLFSAVRPRRLLYLAIDGVAPRAKMNQQRSRRFRSAQEAEEAAELMEETRQAMKEMGMKVPPKA-KPAWDSNIITPGTEFMHKLSRYLRFYVQDRVNRDKAWQNIKVILSDASEPGEGEHKIMDFVRRQRNQPGYDPNQHHILHGLDADLIMLGLATHERSFTILREQVLFGRQQKEASERKTAAMNAARDALAGVGQKAKRGEHGEHDGDVSPNKPLQMLQLWTLREYLENEFRELEAPGRVPFGYDFERVVDDFVFLCFFVGNDFLPHLPSLGIRDGALDYLFNVYKRVISSLGDYLTANGGRVNLKQVDVIMSEVGEIEDEVFKRRKQAEVKDQAWRNRSGGRGXXXXXXXXXXXXXXDRGGAGLGFANGADAGR-------------------YGSGXXXXXXXXXQQGLTTSRADKKKAASKAKETA--------KASDDSI-------------------------KNQAVPIGSVKTD--RLKDAKRRLEDGGQRGGAAWGGGDVGNTAEGGAGAAPEDANNFLCRRDCDSGDHRCGCSGVGQAGGRSQXXXXXXXXXXXXXXEFLDMTEEEIVQAKSVLKDKVKDQSQALLDEARNSVDDKVRLWEDGWKDRYYADKCKLEDIEGGGGRERLFQTYVEGLCWVMLYYYQGCPSWTWYFPFHYAPFASDLINCDR 2187
MGVPAF+RWLSEKYP+ V+DM+E RP V+G +P+DL A NPN +EFDNLYIDMNGIIHPCSHPED+P P +E EM+ N+M YVDR+F+AVRPRRL++LAIDGVAPRAKMNQQR+RRFRSA +A E E+ TRQ M MG+ VPP+ WDSN+ITPGTEFM L+ YLRFYV RVN KAWQ +KV+ SD SEPGEGEHKIMDF+R++R QPGYDPN HILHGLDADLIML LATHE FTILREQV FGR+ ++ + +A +A DA+ GQKA G KP QML + TLREYLE EFR L +PFGY+FERVVDDFVFLCFFVGNDFLPHLPSL IRDGA+D+L NVYKRV+ ++GDYLTA GG VNL+QVD+I++EVG +EDEVF+RR+ E + QA NR A + A+ GR G + + +K K K E +ASD I + A P+ VKT+ + D K L + G G V E A+ +D+ ++ + D G +G+ G+ + ++ E+ A+ L ++VK + +A LD + ++D +R E GWKDRYY DK K +++E GGGRE +++TY+EGLCWV YYY+GC +W W++PFHYAPFASDL+N +R
Sbjct: 1 MGVPAFFRWLSEKYPRTVLDMVEQRPQVVDGVPLPMDLRAPNPNNMEFDNLYIDMNGIIHPCSHPEDRPTPKTEAEMFVNVMVYVDRIFAAVRPRRLVFLAIDGVAPRAKMNQQRTRRFRSAGDARERHEIKLATRQEMVAMGLPVPPEELDKEWDSNVITPGTEFMVTLASYLRFYVAHRVNTCKAWQQVKVLFSDGSEPGEGEHKIMDFIRKERAQPGYDPNTRHILHGLDADLIMLALATHEPHFTILREQVFFGRRGRDGPQ--VSAAQSAFDAM--QGQKADDGLARGEGSRFPYLKPFQMLHIPTLREYLEEEFRSLRG---LPFGYNFERVVDDFVFLCFFVGNDFLPHLPSLDIRDGAIDFLLNVYKRVLPAMGDYLTAPGGTVNLEQVDIILAEVGRVEDEVFRRRRAGEEQHQARLNRR------VREVERRHGGTVQELSARIVPADVQPLGRPKLPHPVPRLSPVASPFLPAPPGPSPEEKNMKNKSVAQQLREKLKKPKKELENGVAGVEGGPEASDAPIGDDCEAGMKHELDHTTKMETPVIEASDSAKPVKRVKTEDSNIMDDKADLVTLKEPGSVTALGMSVEMCLE--TTASAQDSQEGT--KELEEDDEDVGDDAMGEEEGKEEFEDPHIVVPP-------ELEGTELAAAQKELAERVKSKQEARLDRLKEEIEDTIRYHEAGWKDRYYQDKLKKQNLEKGGGREHMYRTYIEGLCWVFQYYYRGCQAWGWFYPFHYAPFASDLVNIER 744
BLAST of mRNA_S-firma_F_contig1086.1148.1 vs. uniprot
Match: A0A2P4Y092_9STRA (5'-3' exoribonuclease (Fragment) n=2 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4Y092_9STRA) HSP 1 Score: 593 bits (1529), Expect = 4.510e-202 Identity = 345/718 (48.05%), Postives = 436/718 (60.72%), Query Frame = 1
Query: 49 MGVPAFYRWLSEKYPKIVVDMLEDRPVRVEGT---EIPLDLTAANPNGIEFDNLYIDMNGIIHPCSHPEDKPPPASEEEMYKNIMDYVDRLFSAVRPRRLLYLAIDGVAPRAKMNQQRSRRFRSAQEAEEAAELMEETRQAMKEMGMKVPPKAKPAWDSNIITPGTEFMHKLSRYLRFYVQDRVNRDKAWQNIKVILSDASEPGEGEHKIMDFVRRQRNQPGYDPNQHHILHGLDADLIMLGLATHERSFTILREQVLFGRQQKEASERKTAAMNAARDALAGVGQKAKRGEHGEHDGDV--SPNKPLQMLQLWTLREYLENEFRELEAPGRVPFGYDFERVVDDFVFLCFFVGNDFLPHLPSLGIRDGALDYLFNVYKRVISSLGDYLTANGGRVNLKQVDVIMSEVGEIEDEVFKRRKQAEVKDQAWRNRSGGRGXXXXXXXXXXXXXXDRGGAGLGFANGADAGRYGSGXXXXXXXXXQQGLTTSRADKKKAASKAKETAKASDDSIKNQAVPIGSVKTDRLKDAKRRLEDGGQRGGAAWGGGDVGNTAEGGAGAAPEDANNFLCRRDCDSGDHRCGCSGVGQAGGRSQXXXXXXXXXXXXXXEFLDMTEEEIVQAKSVLKDKVKDQSQALLDEARNSVDDKVRLWEDGWKDRYYADKCKLEDIEGGGGRERLFQTYVEGLCWVMLYYYQGCPSWTWYFPFHYAPFASDLINCDR 2187
MGVPAFYRW+ EKYPK VVD +E R V +EG E+ D T +PNG E DNLY+DMNG+IHPC+HPE+ P +EEEMY+ +M YVDRL +AVRPRR+LYLAIDGVAPRAKMNQQR+RRFR+AQEAE+ E+ +E + M +G KVP K + WDSN+ITPGT+FM KL++YLRFY++DRVN + AW++IKVILSDA PGEGEHK+M ++R QR+QPGYDPNQHH+LHGLDADLIMLGLATHE F+ILRE+VLFG+Q+ E +K DA K KRGE GEHD D+ S KPLQ L + TLREYL EF L +PF YDFERV+DDFVFLCFFVGNDFLPHLPSL IRDGALD+L +Y +++ ++G Y+T +GG VNL +VDVI++EVG++ED +F+RR + +++ R + L+ + D+ AA+ AK++A T+ LK KRR++ +D + D + G +T EE V+A+ VK+ + L++ R V D VRL E GWK RYY+DK K +DIE GGGRER+F Y+EGLCWVM YYY GC SW W++PFHYAPFASDL N DR
Sbjct: 1 MGVPAFYRWVQEKYPKCVVDCVESRAVVLEGERHFELT-DTTGPSPNGFEVDNLYVDMNGLIHPCAHPENGEAPKTEEEMYRRVMAYVDRLVAAVRPRRVLYLAIDGVAPRAKMNQQRARRFRAAQEAEQRMEVEKEALEYMSALGHKVPSKQEKPWDSNVITPGTKFMAKLAKYLRFYIRDRVNNNAAWKSIKVILSDAGVPGEGEHKLMQYIRVQRSQPGYDPNQHHVLHGLDADLIMLGLATHEVKFSILREEVLFGKQKYERERQKE--QQTVLDANGTTLNKRKRGEFGEHDADLVASDLKPLQYLHIATLREYLYVEFEPLSRV--LPFEYDFERVIDDFVFLCFFVGNDFLPHLPSLDIRDGALDFLILIYAKLLPAMGGYIT-DGGHVNLSRVDVILAEVGQVEDVIFQRRALKQAENERRR---------------------------------------------------KSRLSNEKKDQIAAAA-AKDSA------------------TEILK--KRRID------------------------------------KDIIAADKKYG-----------------------------GLTPEEAVKAR------VKESVEKKLEQYREEVQDVVRLGEPGWKTRYYSDKLKADDIEVGGGRERVFHAYIEGLCWVMRYYYTGCASWQWFYPFHYAPFASDLRNIDR 569
BLAST of mRNA_S-firma_F_contig1086.1148.1 vs. uniprot
Match: A0A0P1AH50_PLAHL (5'-3' exoribonuclease n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AH50_PLAHL) HSP 1 Score: 601 bits (1549), Expect = 1.850e-200 Identity = 347/718 (48.33%), Postives = 436/718 (60.72%), Query Frame = 1
Query: 49 MGVPAFYRWLSEKYPKIVVDMLEDRPVRVEGT---EIPLDLTAANPNGIEFDNLYIDMNGIIHPCSHPEDKPPPASEEEMYKNIMDYVDRLFSAVRPRRLLYLAIDGVAPRAKMNQQRSRRFRSAQEAEEAAELMEETRQAMKEMGMKVPPKAKPAWDSNIITPGTEFMHKLSRYLRFYVQDRVNRDKAWQNIKVILSDASEPGEGEHKIMDFVRRQRNQPGYDPNQHHILHGLDADLIMLGLATHERSFTILREQVLFGRQQKEASERKTAAMNAARDALAGVGQKAKRGEHGEHDGDV--SPNKPLQMLQLWTLREYLENEFRELEAPGRVPFGYDFERVVDDFVFLCFFVGNDFLPHLPSLGIRDGALDYLFNVYKRVISSLGDYLTANGGRVNLKQVDVIMSEVGEIEDEVFKRRKQAEVKDQAWRNRSGGRGXXXXXXXXXXXXXXDRGGAGLGFANGADAGRYGSGXXXXXXXXXQQGLTTSRADKKKAASKAKETAKASDDSIKNQAVPIGSVKTDRLKDAKRRLEDGGQRGGAAWGGGDVGNTAEGGAGAAPEDANNFLCRRDCDSGDHRCGCSGVGQAGGRSQXXXXXXXXXXXXXXEFLDMTEEEIVQAKSVLKDKVKDQSQALLDEARNSVDDKVRLWEDGWKDRYYADKCKLEDIEGGGGRERLFQTYVEGLCWVMLYYYQGCPSWTWYFPFHYAPFASDLINCDR 2187
MGVPAFYRW+ EKYPK VVD +E R V +EG E+ D T NPNG E DNLY+DMNG+IHPC+HPED P +EEEMY+ +M YVDRL +AVRPRRLLYLAIDGVAPRAKMNQQR+RRFR+AQEAE+ E+ +E + M +G K+P + AWDSN+ITPGT+FM KL+++LRFY++DRVN + AW++IK+ILSDA PGEGEHK+M++VR QR+QPGYDPNQHH+LHGLDADLIMLGLATHE F+ILRE+VLFG+Q+ E +K M DA K KRGE GEHD D+ S K LQ L + TLREYL EF L +PF YDFERV+DDFVFLCFFVGNDFLPHLPSL IRDGALD+L +Y +++ ++G YLT +GG VNL +VDVI++EVG++ED +F+RR + +++ R + L+ + D+ A++ K+ AV I LK KRR++ +D +GD + G MT EE ++A+ VK+ + L++ R V D VRL E GWK RYY+DK K +DIE GGGRER+F Y+EGLCWVM YYY GC SW W++PFHYAPFASDL N DR
Sbjct: 1 MGVPAFYRWVQEKYPKCVVDCIESRAVELEGERHFELT-DTTGPNPNGFEVDNLYVDMNGLIHPCAHPEDGEAPKTEEEMYRRVMAYVDRLVAAVRPRRLLYLAIDGVAPRAKMNQQRARRFRAAQEAEQRMEVEKEALEYMAALGHKIPATQEKAWDSNVITPGTKFMAKLAKHLRFYIRDRVNNNTAWKSIKIILSDAGVPGEGEHKLMEYVRVQRSQPGYDPNQHHVLHGLDADLIMLGLATHEVKFSILREEVLFGKQKYERERQKEQQM--VLDANGTTLSKRKRGEFGEHDSDLIASDLKQLQFLHIATLREYLRVEFEPLATV--LPFPYDFERVIDDFVFLCFFVGNDFLPHLPSLDIRDGALDFLILIYAKLLPAMGGYLT-DGGHVNLSRVDVILAEVGQVEDVIFQRRSLKQAENERRR---------------------------------------------------KSRLSNEKRDQIAASA------------AKDSAVEI-------LK--KRRID------------------------------------KDIIAGDKKYG-----------------------------GMTPEEAIKAR------VKESVEMKLEQYREEVQDVVRLGEPGWKTRYYSDKLKADDIEVGGGRERVFHAYIEGLCWVMRYYYSGCASWQWFYPFHYAPFASDLRNIDR 569
BLAST of mRNA_S-firma_F_contig1086.1148.1 vs. uniprot
Match: A0A8K1CPD8_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CPD8_PYTOL) HSP 1 Score: 600 bits (1548), Expect = 1.920e-199 Identity = 348/718 (48.47%), Postives = 427/718 (59.47%), Query Frame = 1
Query: 49 MGVPAFYRWLSEKYPKIVVDMLEDRPVRVEGT---EIPLDLTAANPNGIEFDNLYIDMNGIIHPCSHPEDKPPPASEEEMYKNIMDYVDRLFSAVRPRRLLYLAIDGVAPRAKMNQQRSRRFRSAQEAEEAAELMEETRQAMKEMGMKVPPKAKPAWDSNIITPGTEFMHKLSRYLRFYVQDRVNRDKAWQNIKVILSDASEPGEGEHKIMDFVRRQRNQPGYDPNQHHILHGLDADLIMLGLATHERSFTILREQVLFGRQQKEASERKTAAMNAARDALAGVGQKAKRGEHGEHDGDV--SPNKPLQMLQLWTLREYLENEFRELEAPGRVPFGYDFERVVDDFVFLCFFVGNDFLPHLPSLGIRDGALDYLFNVYKRVISSLGDYLTANGGRVNLKQVDVIMSEVGEIEDEVFKRRKQAEVKDQAWRNRSGGRGXXXXXXXXXXXXXXDRGGAGLGFANGADAGRYGSGXXXXXXXXXQQGLTTSRADKKKAASKAKETAKASDDSIKNQAVPIGSVKTDRLKDAKRRLEDGGQRGGAAWGGGDVGNTAEGGAGAAPEDANNFLCRRDCDSGDHRCGCSGVGQAGGRSQXXXXXXXXXXXXXXEFLDMTEEEIVQAKSVLKDKVKDQSQALLDEARNSVDDKVRLWEDGWKDRYYADKCKLEDIEGGGGRERLFQTYVEGLCWVMLYYYQGCPSWTWYFPFHYAPFASDLINCDR 2187
MGVPAFYRW+ EKYPK VVD +E R V +EG E+ LD++ NPNG E DNLY+DMNG+IHPC HPE P +EEEMY IM YVDRLF+AVRPRR+LYLAIDGVAPRAKMNQQR+RRFRSAQEAE+ E+ +E M+ MG KVP K WDSN+ITPGT+FM KL++Y+RFY++DR+N + AW++IKVI SDA PGEGEHK+M ++R QR QPGYDPNQHH+LHGLDADLIMLGLATHE F+ILRE+VLFG+ + E ++ + M DA QK KRGE GEHD D S KPLQ L + TLREYL+ EF L +PF YDFERVVDDFVFLCFFVGNDFLPHLPSL IRDGALD+L +Y +++ +LG YLT G VNL +VDVI++EVG +ED +F+RR + +++ R +Q LT + D+ AA A G+V+ + KRR+ D + DH G+ A+ +K ++KD + L++ R V D VRL E GWK RYY+DK K EDIE GGGRE++FQTY+EGLCWVM YYY GC SW W++PFHYAPFASDL N DR
Sbjct: 1 MGVPAFYRWVQEKYPKCVVDCVEQRAVVLEGEYHHEL-LDVSGPNPNGFEIDNLYVDMNGLIHPCCHPEHGDAPKTEEEMYCRIMAYVDRLFAAVRPRRVLYLAIDGVAPRAKMNQQRARRFRSAQEAEQRKEIEKEALDYMRAMGHKVPEKQSEGWDSNVITPGTKFMSKLAKYMRFYIRDRINNNPAWKSIKVIFSDAGCPGEGEHKLMSYIRDQRAQPGYDPNQHHVLHGLDADLIMLGLATHEVKFSILREEVLFGKAKFERERQQQSQMML--DANGVPSQKRKRGEFGEHDADAIASDLKPLQFLHIATLREYLQIEFEPLSQA--LPFPYDFERVVDDFVFLCFFVGNDFLPHLPSLDIRDGALDFLILIYAKLLPALGGYLT-EAGEVNLSRVDVILAEVGAVEDVIFQRRSMKQAENERRR---------------------------------------------------KQRLTNDQKDRIGAA-----------------AAKEGAVEVVK----KRRI--------------------------------------DKEVIDHEKKYGGLS---------------------------------AEEAVKARIKDTVELQLEKYREEVQDVVRLGEPGWKTRYYSDKLKAEDIEHGGGREKVFQTYIEGLCWVMRYYYHGCASWNWFYPFHYAPFASDLRNIDR 569
BLAST of mRNA_S-firma_F_contig1086.1148.1 vs. uniprot
Match: K3X1Z0_GLOUD (5'-3' exoribonuclease n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X1Z0_GLOUD) HSP 1 Score: 596 bits (1537), Expect = 5.730e-199 Identity = 345/718 (48.05%), Postives = 438/718 (61.00%), Query Frame = 1
Query: 49 MGVPAFYRWLSEKYPKIVVDMLEDRPVRVEGT---EIPLDLTAANPNGIEFDNLYIDMNGIIHPCSHPEDKPPPASEEEMYKNIMDYVDRLFSAVRPRRLLYLAIDGVAPRAKMNQQRSRRFRSAQEAEEAAELMEETRQAMKEMGMKVPPKAKPAWDSNIITPGTEFMHKLSRYLRFYVQDRVNRDKAWQNIKVILSDASEPGEGEHKIMDFVRRQRNQPGYDPNQHHILHGLDADLIMLGLATHERSFTILREQVLFGRQQKEASERKTAAMNAARDALAGVGQKAKRGEHGEHDGDVSPN--KPLQMLQLWTLREYLENEFRELEAPGRVPFGYDFERVVDDFVFLCFFVGNDFLPHLPSLGIRDGALDYLFNVYKRVISSLGDYLTANGGRVNLKQVDVIMSEVGEIEDEVFKRRKQAEVKDQAWRNRSGGRGXXXXXXXXXXXXXXDRGGAGLGFANGADAGRYGSGXXXXXXXXXQQGLTTSRADKKKAASKAKETAKASDDSIKNQAVPIGSVKTDRLKDAKRRLEDGGQRGGAAWGGGDVGNTAEGGAGAAPEDANNFLCRRDCDSGDHRCGCSGVGQAGGRSQXXXXXXXXXXXXXXEFLDMTEEEIVQAKSVLKDKVKDQSQALLDEARNSVDDKVRLWEDGWKDRYYADKCKLEDIEGGGGRERLFQTYVEGLCWVMLYYYQGCPSWTWYFPFHYAPFASDLINCDR 2187
MGVPAFYRW+ EKYPK VVD +E R V +EG E+ +D T NPNG E DNLY+DMNG+IHPC+HPE P +EEEMY+ IM YVDRL +AVRPRR+LYLAIDGVAPRAKMNQQR+RRFR+AQEAE+ E+ +E + MK +G VP K + AWDSN+ITPGT+FM KL++Y+RFY++DR+N + AW+++KVI SDA PGEGEHK+M ++R QR+QPGYDPNQHH+LHGLDADLIMLGLATHE F+ILRE+VLFG+Q+ E K DA K KRG+ GEHDGD+ P+ KPLQ L + TLREYL+ EF L +PF YDFERV+DDFVFLCFFVGNDFLPHLPSL IRDGALD+L +Y +++ ++G YLT + G V+L +VDVI++EVG +ED +F+RR A +D+ R R + ++ + D+ AA+ KN AV I VK KRR++ +D + D + G +T EE V+A+ +K+ + L++ R+ V D VRL E GWK RYY+DK K +DIE GGGRE++FQ+Y+EGLCWVM YYY GC SW W++PFHYAPFASDL N DR
Sbjct: 1 MGVPAFYRWIQEKYPKCVVDCVESRAVVLEGEHHYEL-MDTTGPNPNGFEVDNLYVDMNGLIHPCAHPEHGEAPKTEEEMYRRIMAYVDRLVAAVRPRRVLYLAIDGVAPRAKMNQQRARRFRAAQEAEQRMEVEKEALEYMKALGHSVPSKQEKAWDSNVITPGTKFMSKLAKYMRFYIRDRINNNPAWKSMKVIFSDAGVPGEGEHKLMQYIRVQRSQPGYDPNQHHVLHGLDADLIMLGLATHEVKFSILREEVLFGKQKYEREREK---QKTVLDANGVPDHKRKRGDFGEHDGDLIPSDQKPLQFLHIATLREYLKIEFEPLSLV--LPFEYDFERVIDDFVFLCFFVGNDFLPHLPSLDIRDGALDFLILIYAKLLPAMGGYLT-DTGEVDLARVDVILAEVGAVEDVIFQRR--ALKQDENERRR-------------------------------------------------KSRISYEKRDQIAAAA------------AKNDAVEI--VK-------KRRID------------------------------------KDVIAADKKYG-----------------------------GLTAEEAVKAR------IKESVETQLEKYRDEVQDVVRLGEPGWKTRYYSDKMKADDIEHGGGREKVFQSYIEGLCWVMKYYYSGCASWQWFYPFHYAPFASDLRNIDR 568
BLAST of mRNA_S-firma_F_contig1086.1148.1 vs. uniprot
Match: A0A835YKU1_9STRA (XRN 5'-3' exonuclease N-terminus-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKU1_9STRA) HSP 1 Score: 617 bits (1591), Expect = 4.770e-197 Identity = 401/892 (44.96%), Postives = 479/892 (53.70%), Query Frame = 1
Query: 70 RWLSEKYPKIVVDMLEDRPVRVEGTEIPLDLTAANPNGIEFDNLYIDMNGIIHPCSHPEDKPPPASEEEMYKNIMDYVDRLFSAVRPRRLLYLAIDGVAPRAKMNQQRSRRFRSAQEAEEAAELMEETRQAMK-------------------------------EMGMKVPPKAKPAWDSNIITPGTEFMHKLSRYLRFYVQDRVNRDKAWQNIKVILSDASEPGEGEHKIMDFVRRQRNQPGYDPNQHHILHGLDADLIMLGLATHERSFTILREQ---------------------------------------VLFGRQQKEASERKTAAMNAARDALAGVGQKAKRGEHGEHD---GDVSPNKPLQMLQLWTLREYLEN------------------------------------EFRELEAP------------------------GRVPFGYDFERVVDDFVFLCFFVGNDFLPHLPSLGIRDGALDYLFNVYKRVISSLGDYLTANGGRVNLKQVDVIMSEVGEIEDEVFKRRKQAEVKDQAWRN------RSGGRGXXXXXXXXXXXXXXDRGGAGLGFANGADAGRYGSGXXXXXXXXXQQGLTTSRADKKKAASKAK----------ETAKASDDSIKNQAVPIGSVKTDRLKDAKRRLEDGGQRGGAAWGGGDVGNTAEGGAGAAPEDANNFLCRRDCDSGDHRC-----GCSGVGQAG--------GRSQXXXXXXXXXXXXXXEFL-DMTEEEIVQAKSVLKDK------------------------VKDQSQALLDEARNSVDDKVRLWEDGWKDRYYADKCKLEDIEGGGGRERLFQTYVEGLCWVMLYYYQGCPSWTWYFPFHYAPFASDLINCD 2184
RWLSEKYPKIV DM+E RP V G +PLDLT NPNG+EFDNLY+DMNGIIHPC+HPED P P +EEEMY N+M YVDRL SAVRPRR+LYLA+DGVAPRAKMNQQRSRRFR+AQEA+E E+MEETR+ M E+G+ VPP + PAWDSN+ITPGT FM +LS YLRFY+Q R+N +KAW+NIKVILSDA++PGEGEHKIM++VR+QR QPGYDPNQHHILHGLDADLIMLGLATHE FTILREQ V FGR+ +E E AA A DA+AGV G + D G+ +KPLQML++W LREYL++ EF L+ G +PF YDFERVVDDFVFLCFFVGNDFLPHLPSL IRDGALD+L NVY+R + ++GDYLT GG VNL+ V VIM+EVGEIEDEVF+RR+ AE KD R R+GG G A GRY Q +T + K+K+ S +AK + D+ N+A DRL+ R A D+ N A +A SG G +G G+A EFL ++EE+ +AK LKD+ VK++S+ L++ R V D VRLWE GWKDRYY+DKCKL+DI GGGR+R+ YVEGLCWVM YYYQG WTWY+PFHYAPFASDLI+CD
Sbjct: 634 RWLSEKYPKIVTDMMEKRPTVVNGVRMPLDLTEPNPNGMEFDNLYVDMNGIIHPCAHPEDGPQPKTEEEMYVNVMKYVDRLMSAVRPRRVLYLAVDGVAPRAKMNQQRSRRFRAAQEAQEHREVMEETRKEMISPMFGQVEVRVAXXXXXXXXXXXXXXXXXXIELGLPVPPVSGPAWDSNVITPGTAFMQRLSVYLRFYIQHRINTNKAWRNIKVILSDANQPGEGEHKIMEYVRQQRTQPGYDPNQHHILHGLDADLIMLGLATHEARFTILREQRRSRHQRVLRSMTIAFCRCAAVSARAVTNAYSLPSTAAQVFFGRKDQERKEAAAAARRAMEDAVAGVNG----GAEADDDVVTGEELGHKPLQMLRIWVLREYLQSKLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEFALLQVTSSSTVTDFTSFNVLVLQAEFASLQGTLPFKYDFERVVDDFVFLCFFVGNDFLPHLPSLDIRDGALDFLQNVYRRKLPAIGDYLTLPGGEVNLRGVAVIMAEVGEIEDEVFRRRRSAEEKDAIRRGQGNSMRRAGGAGRVGAAAVRDQAMTPG--------AMKKVGGRYQGAPSSAPPKLAAQKVTPA---KRKSPSPXXXXXXXXXXXPSSAKGARDASSNKAA------ADRLRSKLARTSLSTDVSAAKAP--DLQNGAGSAELSAAXXXXXXXXXXXAPSGPPXADETPGGENGDGEAAVEDGDVPVEEDPLDEDAIVNHLPHVEEFLPSLSEEDAARAKLALKDRPLKCTLEVXXXXXXXXXXXXXXXXVKEKSEEQLEKYRAGVQDNVRLWEAGWKDRYYSDKCKLDDITAGGGRQRIQHAYVEGLCWVMRYYYQGVSDWTWYYPFHYAPFASDLIDCD 1502
BLAST of mRNA_S-firma_F_contig1086.1148.1 vs. uniprot
Match: A0A485KPZ9_9STRA (5'-3' exoribonuclease n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KPZ9_9STRA) HSP 1 Score: 593 bits (1528), Expect = 4.920e-197 Identity = 342/717 (47.70%), Postives = 436/717 (60.81%), Query Frame = 1
Query: 49 MGVPAFYRWLSEKYPKIVVDMLEDRPVRVEGTEI--PLDLTAANPNGIEFDNLYIDMNGIIHPCSHPEDKPPPASEEEMYKNIMDYVDRLFSAVRPRRLLYLAIDGVAPRAKMNQQRSRRFRSAQEAEEAAELMEETRQAMKEMGMKVPPKAKPAWDSNIITPGTEFMHKLSRYLRFYVQDRVNRDKAWQNIKVILSDASEPGEGEHKIMDFVRRQRNQPGYDPNQHHILHGLDADLIMLGLATHERSFTILREQVLFGRQQKEASERKTAAMNAARDALAGVGQKAKRGEHGEHDGDVSPNK--PLQMLQLWTLREYLENEFRELEAPGRVPFGYDFERVVDDFVFLCFFVGNDFLPHLPSLGIRDGALDYLFNVYKRVISSLGDYLTANGGRVNLKQVDVIMSEVGEIEDEVFKRRKQAEVKDQAWRNRSGGRGXXXXXXXXXXXXXXDRGGAGLGFANGADAGRYGSGXXXXXXXXXQQGLTTSRADKKKAASKAKETAKASDDSIKNQAVPIGSVKTDRLKDAKRRLEDGGQRGGAAWGGGDVGNTAEGGAGAAPEDANNFLCRRDCDSGDHRCGCSGVGQAGGRSQXXXXXXXXXXXXXXEFLDMTEEEIVQAKSVLKDKVKDQSQALLDEARNSVDDKVRLWEDGWKDRYYADKCKLEDIEGGGGRERLFQTYVEGLCWVMLYYYQGCPSWTWYFPFHYAPFASDLINCDR 2187
MGVPAFYRWLSEKYP+ +VD +ED +EG + +++ NPNG EFDNL+IDMNGIIHPC+HPE+ P +EEEM+ +M+YVDRL + VRPR+LLY+AIDGVAPRAKMNQQR+RRFRSAQEA++ E+ E R+ M+ MG K PPK P WDSN+ITPGT+FM KLS+Y+RFYV+DR+N AW+ KV+ SDAS PGEGEHK+M ++R QR+QPGYDPNQHH+LHGLDADLIMLGLATHE F++LRE+VLFG+ + E +R N DA K KRGE GEHD +P+ PLQ L + TLREYL EF+ LEA ++PF YDFERV+DDFVF+CFFVGNDFLPHLP L IRDGA+DYL VY +++ SLG YLT GG V+L++VDVI++EVG IE+ +F+RR A+ ++ A R Q LT + +K AA+ K+ AV + +++L+ GAA + + + D D +F MT E LK+++K + Q LD+ + + D+VRL E GWK RYY+DK K DIE GGGR+++FQ+YVEGLCWVM YYY G SW W++PFHYAPFASDL N DR
Sbjct: 1 MGVPAFYRWLSEKYPRTIVDAVEDGAPVIEGRKRFNLINVENDNPNGQEFDNLFIDMNGIIHPCAHPENGEQPRTEEEMFLRLMEYVDRLVACVRPRKLLYMAIDGVAPRAKMNQQRARRFRSAQEAKQRNEVETEVREYMELMGQKPPPKHTP-WDSNVITPGTKFMAKLSKYMRFYVRDRMNNCPAWKQFKVVFSDASVPGEGEHKLMSYIRTQRSQPGYDPNQHHVLHGLDADLIMLGLATHEVQFSVLREEVLFGKAKYEKEKRIKLDANGVHDA-----SKRKRGEFGEHDSSTAPSDLTPLQFLHVSTLREYLAIEFQPLEA--KLPFPYDFERVIDDFVFMCFFVGNDFLPHLPCLDIRDGAVDYLLLVYAKLLPSLGGYLTKPGGEVDLEKVDVILAEVGTIEETIFQRR-IAKERENAMRQ--------------------------------------------------AQRLTHGQREKLMAAA------------AKDGAVAV-----------EKKLK-----------------------GAAGQAVATAVAKPDEDES-------------------------------KFAQMTPE------MALKERIKAKEQKKLDKYKEEIQDEVRLGEPGWKTRYYSDKLKAHDIETGGGRDKVFQSYVEGLCWVMRYYYTGVASWNWFYPFHYAPFASDLKNIDR 575 The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig1086.1148.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-firma_F_contig1086.1148.1 >prot_S-firma_F_contig1086.1148.1 ID=prot_S-firma_F_contig1086.1148.1|Name=mRNA_S-firma_F_contig1086.1148.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=729bp TGQRKAKRREEKGRETMGVPAFYRWLSEKYPKIVVDMLEDRPVRVEGTEIback to top mRNA from alignment at S-firma_F_contig1086:15555..25631+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-firma_F_contig1086.1148.1 ID=mRNA_S-firma_F_contig1086.1148.1|Name=mRNA_S-firma_F_contig1086.1148.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=10077bp|location=Sequence derived from alignment at S-firma_F_contig1086:15555..25631+ (Sphaerotrichia firma ET2_F female)back to top Coding sequence (CDS) from alignment at S-firma_F_contig1086:15555..25631+ >mRNA_S-firma_F_contig1086.1148.1 ID=mRNA_S-firma_F_contig1086.1148.1|Name=mRNA_S-firma_F_contig1086.1148.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=4374bp|location=Sequence derived from alignment at S-firma_F_contig1086:15555..25631+ (Sphaerotrichia firma ET2_F female)back to top |