mRNA_S-firma_F_contig10857.1145.1 (mRNA) Sphaerotrichia firma ET2_F female
|
Overview
Homology
BLAST of mRNA_S-firma_F_contig10857.1145.1 vs. uniprot
Match: A0A097IUM6_9PHAE (Malate dehydrogenase n=1 Tax=Punctaria latifolia TaxID=90013 RepID=A0A097IUM6_9PHAE) HSP 1 Score: 423 bits (1088), Expect = 1.850e-147 Identity = 214/226 (94.69%), Postives = 218/226 (96.46%), Query Frame = 1
Query: 1 DDLFNTNASIVKGIADQCSKSCPKACFLIISNPVNSTVPIFADVLKANGVYNPQKLMGVTTLDVCRAKTFVAENQGMDVDKVDVTVVGGHAGTTIMPLLSQVQGAKFSEEDIKALTHRIQFGGDEVVQAKDGAGSATLSMAHAGAYFAGKVLDGLNGVQGVKECAFVESDLTDAPFFASPVSLGKDGVSEVHGFGSLSGFEQSLVDENVPALIKQAQKGSDFVKSN 678
DDLFNTNASIVKGIADQCSKSCP ACFLIISNPVNSTVPIFADVLKANGVYNPQKLMGVTTLDVCRAKTFVAENQGMDVDKVDVTVVGGHAGTTIMPLLSQV+GAKFSEEDIKALTHRIQFGGDEVVQAKDGAGSATLSMAHAGAYFAGKVLDGLNGVQGVKECAFVESDLTDAPFFASPVSLGKDGVS+VHGF +LS FEQSLVDENVPAL+KQA FVKSN
Sbjct: 124 DDLFNTNASIVKGIADQCSKSCPNACFLIISNPVNSTVPIFADVLKANGVYNPQKLMGVTTLDVCRAKTFVAENQGMDVDKVDVTVVGGHAGTTIMPLLSQVEGAKFSEEDIKALTHRIQFGGDEVVQAKDGAGSATLSMAHAGAYFAGKVLDGLNGVQGVKECAFVESDLTDAPFFASPVSLGKDGVSKVHGFSNLSAFEQSLVDENVPALMKQAXXXXXFVKSN 349
BLAST of mRNA_S-firma_F_contig10857.1145.1 vs. uniprot
Match: D8LQM3_ECTSI (Malate dehydrogenase n=7 Tax=Eukaryota TaxID=2759 RepID=D8LQM3_ECTSI) HSP 1 Score: 421 bits (1081), Expect = 2.150e-146 Identity = 206/226 (91.15%), Postives = 222/226 (98.23%), Query Frame = 1
Query: 1 DDLFNTNASIVKGIADQCSKSCPKACFLIISNPVNSTVPIFADVLKANGVYNPQKLMGVTTLDVCRAKTFVAENQGMDVDKVDVTVVGGHAGTTIMPLLSQVQGAKFSEEDIKALTHRIQFGGDEVVQAKDGAGSATLSMAHAGAYFAGKVLDGLNGVQGVKECAFVESDLTDAPFFASPVSLGKDGVSEVHGFGSLSGFEQSLVDENVPALIKQAQKGSDFVKSN 678
DDLFNTNASIVKGIA+QCSKSCPKACFLIISNPVNSTVPIFADVLKANGVYNPQKLMGVTTLDVCRA+TF+AENQGMDVDK+DVTV+GGHAGTTIMPLLSQV+GAKFS+EDIKALTHRIQFGGDEVVQAKDGAGSATLSMAHAGAYFAGKVLDGLNGV+GV ECAFVESDLT+APFFASP +LGKDGVS+VHGFG+LS FEQ+LVD+NVPAL+K AQKGSDFVK+N
Sbjct: 124 DDLFNTNASIVKGIAEQCSKSCPKACFLIISNPVNSTVPIFADVLKANGVYNPQKLMGVTTLDVCRAQTFIAENQGMDVDKLDVTVIGGHAGTTIMPLLSQVEGAKFSDEDIKALTHRIQFGGDEVVQAKDGAGSATLSMAHAGAYFAGKVLDGLNGVEGVTECAFVESDLTEAPFFASPCTLGKDGVSKVHGFGNLSSFEQALVDDNVPALVKMAQKGSDFVKNN 349
BLAST of mRNA_S-firma_F_contig10857.1145.1 vs. uniprot
Match: A0A097IUP2_9PHAE (Malate dehydrogenase n=1 Tax=Dictyopteris undulata TaxID=156997 RepID=A0A097IUP2_9PHAE) HSP 1 Score: 390 bits (1003), Expect = 1.630e-134 Identity = 193/226 (85.40%), Postives = 210/226 (92.92%), Query Frame = 1
Query: 1 DDLFNTNASIVKGIADQCSKSCPKACFLIISNPVNSTVPIFADVLKANGVYNPQKLMGVTTLDVCRAKTFVAENQGMDVDKVDVTVVGGHAGTTIMPLLSQVQGAKFSEEDIKALTHRIQFGGDEVVQAKDGAGSATLSMAHAGAYFAGKVLDGLNGVQGVKECAFVESDLTDAPFFASPVSLGKDGVSEVHGFGSLSGFEQSLVDENVPALIKQAQKGSDFVKSN 678
DDLFNTNASIVKGIA+QC+KSCP ACFLIISNPVNSTVPIF DVLK GV++P+KLMGVT LD+CRA TFVAENQGMDVDKV V V+GGHAGTTIMPLLSQV+GAKFSEEDIKALTHRIQFGGDEVV+AKDGAGSATLSMAHAGAYFA +VLDGLNG GVKEC FVES LTDAP+FASP +LGK+GVSEVHGFG+LS FEQSLVDENVPALIK A+KG+DFVK+N
Sbjct: 125 DDLFNTNASIVKGIAEQCAKSCPNACFLIISNPVNSTVPIFGDVLKTAGVFDPRKLMGVTMLDICRANTFVAENQGMDVDKVSVDVIGGHAGTTIMPLLSQVKGAKFSEEDIKALTHRIQFGGDEVVKAKDGAGSATLSMAHAGAYFAERVLDGLNGATGVKECTFVESSLTDAPYFASPCTLGKEGVSEVHGFGTLSPFEQSLVDENVPALIKMAKKGTDFVKNN 350
BLAST of mRNA_S-firma_F_contig10857.1145.1 vs. uniprot
Match: A0A097IUQ0_9PHAE (Malate dehydrogenase n=8 Tax=Sargassum TaxID=3015 RepID=A0A097IUQ0_9PHAE) HSP 1 Score: 388 bits (997), Expect = 1.280e-133 Identity = 191/226 (84.51%), Postives = 211/226 (93.36%), Query Frame = 1
Query: 1 DDLFNTNASIVKGIADQCSKSCPKACFLIISNPVNSTVPIFADVLKANGVYNPQKLMGVTTLDVCRAKTFVAENQGMDVDKVDVTVVGGHAGTTIMPLLSQVQGAKFSEEDIKALTHRIQFGGDEVVQAKDGAGSATLSMAHAGAYFAGKVLDGLNGVQGVKECAFVESDLTDAPFFASPVSLGKDGVSEVHGFGSLSGFEQSLVDENVPALIKQAQKGSDFVKSN 678
DDLFNTNASIVKGIA+QC+KSCPKACFLIISNPVNSTVPIFA+VLKA+GVY+P KLMGVTTLDV RAKTFVAENQGMDVDKV+V V+GGHAGTTIMPLLSQV+GA F+EEDIK LTHRIQFGGDEVV+AKDGAGSATLSMAHAGAYFA KVLDGLNGV+G+KEC FVES LT APFFASP +LG +GVSE+HG+G LS FEQ+LVDENVPAL+K +QKG DFVK+N
Sbjct: 124 DDLFNTNASIVKGIAEQCAKSCPKACFLIISNPVNSTVPIFAEVLKASGVYDPAKLMGVTTLDVARAKTFVAENQGMDVDKVEVDVIGGHAGTTIMPLLSQVKGANFTEEDIKTLTHRIQFGGDEVVKAKDGAGSATLSMAHAGAYFAEKVLDGLNGVKGIKECTFVESPLTSAPFFASPCTLGTEGVSEIHGYGQLSPFEQALVDENVPALVKMSQKGIDFVKNN 349
BLAST of mRNA_S-firma_F_contig10857.1145.1 vs. uniprot
Match: A0A097IUN2_SACJA (Malate dehydrogenase n=3 Tax=Laminariales TaxID=2886 RepID=A0A097IUN2_SACJA) HSP 1 Score: 384 bits (985), Expect = 8.580e-132 Identity = 191/226 (84.51%), Postives = 208/226 (92.04%), Query Frame = 1
Query: 1 DDLFNTNASIVKGIADQCSKSCPKACFLIISNPVNSTVPIFADVLKANGVYNPQKLMGVTTLDVCRAKTFVAENQGMDVDKVDVTVVGGHAGTTIMPLLSQVQGAKFSEEDIKALTHRIQFGGDEVVQAKDGAGSATLSMAHAGAYFAGKVLDGLNGVQGVKECAFVESDLTDAPFFASPVSLGKDGVSEVHGFGSLSGFEQSLVDENVPALIKQAQKGSDFVKSN 678
DDLFNTNASIVKGIA+Q SKSCP AC LIISNPVNSTVPIFADVLKANGVYNPQKLMGVTTLDV RAKTFVAE+QGMDV K+ V V+GGHAGTTIMPLLSQV+GAKF+EEDI ALTHRIQFGGDEVVQAKDGAGSATLSMAHAGAYFAG+VLDGLNG + VKEC FV+ DLTDAPFFASP +LG DGVS++HGF +L+ FEQSLVDENVP+LI A+KGSDFVK+N
Sbjct: 124 DDLFNTNASIVKGIAEQVSKSCPNACILIISNPVNSTVPIFADVLKANGVYNPQKLMGVTTLDVVRAKTFVAEHQGMDVSKIKVDVIGGHAGTTIMPLLSQVKGAKFTEEDIAALTHRIQFGGDEVVQAKDGAGSATLSMAHAGAYFAGRVLDGLNGKKNVKECTFVDCDLTDAPFFASPCTLGTDGVSKIHGFSNLTPFEQSLVDENVPSLISMAKKGSDFVKNN 349
BLAST of mRNA_S-firma_F_contig10857.1145.1 vs. uniprot
Match: A0A097IUI7_9PHAE (Malate dehydrogenase n=1 Tax=Ishige okamurae TaxID=233772 RepID=A0A097IUI7_9PHAE) HSP 1 Score: 382 bits (980), Expect = 5.470e-131 Identity = 187/226 (82.74%), Postives = 211/226 (93.36%), Query Frame = 1
Query: 1 DDLFNTNASIVKGIADQCSKSCPKACFLIISNPVNSTVPIFADVLKANGVYNPQKLMGVTTLDVCRAKTFVAENQGMDVDKVDVTVVGGHAGTTIMPLLSQVQGAKFSEEDIKALTHRIQFGGDEVVQAKDGAGSATLSMAHAGAYFAGKVLDGLNGVQGVKECAFVESDLTDAPFFASPVSLGKDGVSEVHGFGSLSGFEQSLVDENVPALIKQAQKGSDFVKSN 678
DDLFNTNASIVKGIA+QC+KSCPKACFLIISNPVNSTVPIFADVLK+ GV++P KLMGVTTLDVCRAKTFVAENQGMDVDKV+V V+GGHAGTTIMPLLSQ+ GAKFS+EDIKALTHRIQFGGDEVV+AKDGAGSATLSMAHAGAYFAG+VLDGL+G +KEC FVE D+TDAPFFASP +LGK+GVSE+HGF +LS FEQ+LVD+NV +L K A+KGSDFVK++
Sbjct: 126 DDLFNTNASIVKGIAEQCAKSCPKACFLIISNPVNSTVPIFADVLKSAGVFHPGKLMGVTTLDVCRAKTFVAENQGMDVDKVEVDVIGGHAGTTIMPLLSQIPGAKFSDEDIKALTHRIQFGGDEVVKAKDGAGSATLSMAHAGAYFAGRVLDGLDGQADIKECTFVECDITDAPFFASPCTLGKEGVSEIHGFKNLSSFEQALVDDNVDSLKKMAKKGSDFVKNS 351
BLAST of mRNA_S-firma_F_contig10857.1145.1 vs. uniprot
Match: A0A097IUM5_9PHAE (Malate dehydrogenase n=1 Tax=Desmarestia viridis TaxID=62313 RepID=A0A097IUM5_9PHAE) HSP 1 Score: 379 bits (973), Expect = 5.730e-130 Identity = 186/226 (82.30%), Postives = 208/226 (92.04%), Query Frame = 1
Query: 1 DDLFNTNASIVKGIADQCSKSCPKACFLIISNPVNSTVPIFADVLKANGVYNPQKLMGVTTLDVCRAKTFVAENQGMDVDKVDVTVVGGHAGTTIMPLLSQVQGAKFSEEDIKALTHRIQFGGDEVVQAKDGAGSATLSMAHAGAYFAGKVLDGLNGVQGVKECAFVESDLTDAPFFASPVSLGKDGVSEVHGFGSLSGFEQSLVDENVPALIKQAQKGSDFVKSN 678
DDLFNTNASIVKGIA+QCSKSCP ACFLIISNPVNSTVPIF DVLKANGV+NP KLMGVT+LDV RAKTFVAE+QG+DV K+ V V+GGHAGTTI+PLLS+V+GA F+EEDIKALTHRIQFGGDEVVQAKDGAGSATLSMAHAGAYFAG+VLDGLNGV+ VKEC FVE DLTDAPFFASP +LGKDGVS++HGF L+ FEQ+LVD+NVP LI A+KGS+FVK+N
Sbjct: 124 DDLFNTNASIVKGIAEQCSKSCPNACFLIISNPVNSTVPIFGDVLKANGVFNPAKLMGVTSLDVVRAKTFVAEHQGLDVSKMKVDVIGGHAGTTIIPLLSKVKGADFTEEDIKALTHRIQFGGDEVVQAKDGAGSATLSMAHAGAYFAGRVLDGLNGVKNVKECTFVECDLTDAPFFASPCTLGKDGVSKIHGFSKLTPFEQALVDDNVPTLINMAKKGSEFVKNN 349
BLAST of mRNA_S-firma_F_contig10857.1145.1 vs. uniprot
Match: A0A835YGB7_9STRA (Malate dehydrogenase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YGB7_9STRA) HSP 1 Score: 330 bits (846), Expect = 1.050e-110 Identity = 164/223 (73.54%), Postives = 192/223 (86.10%), Query Frame = 1
Query: 1 DDLFNTNASIVKGIADQCSKSCPKACFLIISNPVNSTVPIFADVLKANGVYNPQKLMGVTTLDVCRAKTFVAENQGMDVDKVDVTVVGGHAGTTIMPLLSQVQGAKFSEEDIKALTHRIQFGGDEVVQAKDGAGSATLSMAHAGAYFAGKVLDGLNGVQGVKECAFVESDLTDAPFFASPVSLGKDGVSEVHGFGSLSGFEQSLVDENVPALIKQAQKGSDFV 669
DDLFNTNA IVKGIA+ C+++CPKA FLIISNPVNSTVPIFA+VLK GVY+ +KLMGVTTLDVCRA+TFVAEN G V+ V V+GGHAGTTI+PLLSQV+GAKFS++D++ALTHRIQFGGDEVV+AKDGAGSATLSMAHAGAYFA +VL + G ++EC FVE+DLT AP+FA+PV LGKDGV +V GFG LS FEQ ++DENVPAL QA+KG DFV
Sbjct: 122 DDLFNTNAGIVKGIAEACAEACPKARFLIISNPVNSTVPIFAEVLKGRGVYDKKKLMGVTTLDVCRAQTFVAENLGQSVNDTAVDVIGGHAGTTILPLLSQVEGAKFSDKDLEALTHRIQFGGDEVVKAKDGAGSATLSMAHAGAYFAIRVLAAMEGEADIRECTFVENDLTAAPYFATPVILGKDGVEKVLGFGKLSAFEQKILDENVPALQAQAKKGVDFV 344
BLAST of mRNA_S-firma_F_contig10857.1145.1 vs. uniprot
Match: F0YJC9_AURAN (Malate dehydrogenase n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YJC9_AURAN) HSP 1 Score: 324 bits (830), Expect = 1.900e-108 Identity = 158/223 (70.85%), Postives = 189/223 (84.75%), Query Frame = 1
Query: 1 DDLFNTNASIVKGIADQCSKSCPKACFLIISNPVNSTVPIFADVLKANGVYNPQKLMGVTTLDVCRAKTFVAENQGMDVDKVDVTVVGGHAGTTIMPLLSQVQGAKFSEEDIKALTHRIQFGGDEVVQAKDGAGSATLSMAHAGAYFAGKVLDGLNGVQGVKECAFVESDLTDAPFFASPVSLGKDGVSEVHGFGSLSGFEQSLVDENVPALIKQAQKGSDFV 669
DDLFNTNASIV+ +A+ C+ +CP ACFLII+NPVNSTVPIFA+ LK +GVY+ KL GVTTLDV RAKTFVAENQG DV DV V+GGHAGTTI+PLLSQ++GA FS++DI LTHRI FGGDEVVQAKDGAGSATLSMA+AGA+F KVL+ LNG G+ ECAFVESD+TDAP+F+SPV+LGK+GV +HG+G+LS FEQ ++D+ VP LI QA+KG FV
Sbjct: 105 DDLFNTNASIVQSLAEACATTCPNACFLIIANPVNSTVPIFAETLKKHGVYDKNKLFGVTTLDVVRAKTFVAENQGGDVLNTDVDVIGGHAGTTILPLLSQIEGASFSQDDIDKLTHRIMFGGDEVVQAKDGAGSATLSMAYAGAHFTFKVLEALNGATGITECAFVESDVTDAPYFSSPVTLGKNGVETIHGYGTLSPFEQDVLDKAVPDLIAQAEKGVKFV 327
BLAST of mRNA_S-firma_F_contig10857.1145.1 vs. uniprot
Match: A0A7S0L929_9EUKA (Malate dehydrogenase (Fragment) n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0L929_9EUKA) HSP 1 Score: 308 bits (790), Expect = 1.370e-102 Identity = 154/225 (68.44%), Postives = 188/225 (83.56%), Query Frame = 1
Query: 1 DDLFNTNASIVKGIADQCSKSCPKACFLIISNPVNSTVPIFADVLKANGVYNPQKLMGVTTLDVCRAKTFVAENQGMDVDKVDVTVVGGHAGTTIMPLLSQVQGAKFSEEDIKALTHRIQFGGDEVVQAKDGAGSATLSMAHAGAYFAGKVLDGLNGVQGVKECAFVESDLTDAPFFASPVSLGKDGVSEVHGFGSLSGFEQSLVDENVPALIKQAQKGSDFVKS 675
DDLFNTNASIV+G+A+ C+KSCP A FLIISNPVNSTVPIFA+ LK +GVYNP+KL GVTTLDV RA TFV+ENQGMDV+ +V V+GGHAGTTI+PLLSQV GAKFSEE+++ LTHRIQFGGDEVV+AKDGAGSATLSMA+AG F ++L ++G V EC+FVE++LT APFF++PV LG +GV EV +G+LS EQ+ +D VP L+ QA+KG DFVK+
Sbjct: 95 DDLFNTNASIVQGLAEACAKSCPDAMFLIISNPVNSTVPIFAETLKKHGVYNPRKLFGVTTLDVVRANTFVSENQGMDVNNTNVRVIGGHAGTTILPLLSQVPGAKFSEENVQNLTHRIQFGGDEVVKAKDGAGSATLSMAYAGQQFTSRLLAAISGEANVVECSFVENNLTAAPFFSTPVRLGPNGVEEVLHYGTLSKAEQATLDAMVPDLVAQAKKGVDFVKN 319 The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10857.1145.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-firma_F_contig10857.1145.1 >prot_S-firma_F_contig10857.1145.1 ID=prot_S-firma_F_contig10857.1145.1|Name=mRNA_S-firma_F_contig10857.1145.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=227bp DDLFNTNASIVKGIADQCSKSCPKACFLIISNPVNSTVPIFADVLKANGVback to top mRNA from alignment at S-firma_F_contig10857:768..4745- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-firma_F_contig10857.1145.1 ID=mRNA_S-firma_F_contig10857.1145.1|Name=mRNA_S-firma_F_contig10857.1145.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=3978bp|location=Sequence derived from alignment at S-firma_F_contig10857:768..4745- (Sphaerotrichia firma ET2_F female)back to top Coding sequence (CDS) from alignment at S-firma_F_contig10857:768..4745- >mRNA_S-firma_F_contig10857.1145.1 ID=mRNA_S-firma_F_contig10857.1145.1|Name=mRNA_S-firma_F_contig10857.1145.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=1362bp|location=Sequence derived from alignment at S-firma_F_contig10857:768..4745- (Sphaerotrichia firma ET2_F female)back to top |