mRNA_S-firma_F_contig10857.1145.1 (mRNA) Sphaerotrichia firma ET2_F female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-firma_F_contig10857.1145.1
Unique NamemRNA_S-firma_F_contig10857.1145.1
TypemRNA
OrganismSphaerotrichia firma ET2_F female (Sphaerotrichia firma ET2_F female)
Homology
BLAST of mRNA_S-firma_F_contig10857.1145.1 vs. uniprot
Match: A0A097IUM6_9PHAE (Malate dehydrogenase n=1 Tax=Punctaria latifolia TaxID=90013 RepID=A0A097IUM6_9PHAE)

HSP 1 Score: 423 bits (1088), Expect = 1.850e-147
Identity = 214/226 (94.69%), Postives = 218/226 (96.46%), Query Frame = 1
Query:    1 DDLFNTNASIVKGIADQCSKSCPKACFLIISNPVNSTVPIFADVLKANGVYNPQKLMGVTTLDVCRAKTFVAENQGMDVDKVDVTVVGGHAGTTIMPLLSQVQGAKFSEEDIKALTHRIQFGGDEVVQAKDGAGSATLSMAHAGAYFAGKVLDGLNGVQGVKECAFVESDLTDAPFFASPVSLGKDGVSEVHGFGSLSGFEQSLVDENVPALIKQAQKGSDFVKSN 678
            DDLFNTNASIVKGIADQCSKSCP ACFLIISNPVNSTVPIFADVLKANGVYNPQKLMGVTTLDVCRAKTFVAENQGMDVDKVDVTVVGGHAGTTIMPLLSQV+GAKFSEEDIKALTHRIQFGGDEVVQAKDGAGSATLSMAHAGAYFAGKVLDGLNGVQGVKECAFVESDLTDAPFFASPVSLGKDGVS+VHGF +LS FEQSLVDENVPAL+KQA     FVKSN
Sbjct:  124 DDLFNTNASIVKGIADQCSKSCPNACFLIISNPVNSTVPIFADVLKANGVYNPQKLMGVTTLDVCRAKTFVAENQGMDVDKVDVTVVGGHAGTTIMPLLSQVEGAKFSEEDIKALTHRIQFGGDEVVQAKDGAGSATLSMAHAGAYFAGKVLDGLNGVQGVKECAFVESDLTDAPFFASPVSLGKDGVSKVHGFSNLSAFEQSLVDENVPALMKQAXXXXXFVKSN 349          
BLAST of mRNA_S-firma_F_contig10857.1145.1 vs. uniprot
Match: D8LQM3_ECTSI (Malate dehydrogenase n=7 Tax=Eukaryota TaxID=2759 RepID=D8LQM3_ECTSI)

HSP 1 Score: 421 bits (1081), Expect = 2.150e-146
Identity = 206/226 (91.15%), Postives = 222/226 (98.23%), Query Frame = 1
Query:    1 DDLFNTNASIVKGIADQCSKSCPKACFLIISNPVNSTVPIFADVLKANGVYNPQKLMGVTTLDVCRAKTFVAENQGMDVDKVDVTVVGGHAGTTIMPLLSQVQGAKFSEEDIKALTHRIQFGGDEVVQAKDGAGSATLSMAHAGAYFAGKVLDGLNGVQGVKECAFVESDLTDAPFFASPVSLGKDGVSEVHGFGSLSGFEQSLVDENVPALIKQAQKGSDFVKSN 678
            DDLFNTNASIVKGIA+QCSKSCPKACFLIISNPVNSTVPIFADVLKANGVYNPQKLMGVTTLDVCRA+TF+AENQGMDVDK+DVTV+GGHAGTTIMPLLSQV+GAKFS+EDIKALTHRIQFGGDEVVQAKDGAGSATLSMAHAGAYFAGKVLDGLNGV+GV ECAFVESDLT+APFFASP +LGKDGVS+VHGFG+LS FEQ+LVD+NVPAL+K AQKGSDFVK+N
Sbjct:  124 DDLFNTNASIVKGIAEQCSKSCPKACFLIISNPVNSTVPIFADVLKANGVYNPQKLMGVTTLDVCRAQTFIAENQGMDVDKLDVTVIGGHAGTTIMPLLSQVEGAKFSDEDIKALTHRIQFGGDEVVQAKDGAGSATLSMAHAGAYFAGKVLDGLNGVEGVTECAFVESDLTEAPFFASPCTLGKDGVSKVHGFGNLSSFEQALVDDNVPALVKMAQKGSDFVKNN 349          
BLAST of mRNA_S-firma_F_contig10857.1145.1 vs. uniprot
Match: A0A097IUP2_9PHAE (Malate dehydrogenase n=1 Tax=Dictyopteris undulata TaxID=156997 RepID=A0A097IUP2_9PHAE)

HSP 1 Score: 390 bits (1003), Expect = 1.630e-134
Identity = 193/226 (85.40%), Postives = 210/226 (92.92%), Query Frame = 1
Query:    1 DDLFNTNASIVKGIADQCSKSCPKACFLIISNPVNSTVPIFADVLKANGVYNPQKLMGVTTLDVCRAKTFVAENQGMDVDKVDVTVVGGHAGTTIMPLLSQVQGAKFSEEDIKALTHRIQFGGDEVVQAKDGAGSATLSMAHAGAYFAGKVLDGLNGVQGVKECAFVESDLTDAPFFASPVSLGKDGVSEVHGFGSLSGFEQSLVDENVPALIKQAQKGSDFVKSN 678
            DDLFNTNASIVKGIA+QC+KSCP ACFLIISNPVNSTVPIF DVLK  GV++P+KLMGVT LD+CRA TFVAENQGMDVDKV V V+GGHAGTTIMPLLSQV+GAKFSEEDIKALTHRIQFGGDEVV+AKDGAGSATLSMAHAGAYFA +VLDGLNG  GVKEC FVES LTDAP+FASP +LGK+GVSEVHGFG+LS FEQSLVDENVPALIK A+KG+DFVK+N
Sbjct:  125 DDLFNTNASIVKGIAEQCAKSCPNACFLIISNPVNSTVPIFGDVLKTAGVFDPRKLMGVTMLDICRANTFVAENQGMDVDKVSVDVIGGHAGTTIMPLLSQVKGAKFSEEDIKALTHRIQFGGDEVVKAKDGAGSATLSMAHAGAYFAERVLDGLNGATGVKECTFVESSLTDAPYFASPCTLGKEGVSEVHGFGTLSPFEQSLVDENVPALIKMAKKGTDFVKNN 350          
BLAST of mRNA_S-firma_F_contig10857.1145.1 vs. uniprot
Match: A0A097IUQ0_9PHAE (Malate dehydrogenase n=8 Tax=Sargassum TaxID=3015 RepID=A0A097IUQ0_9PHAE)

HSP 1 Score: 388 bits (997), Expect = 1.280e-133
Identity = 191/226 (84.51%), Postives = 211/226 (93.36%), Query Frame = 1
Query:    1 DDLFNTNASIVKGIADQCSKSCPKACFLIISNPVNSTVPIFADVLKANGVYNPQKLMGVTTLDVCRAKTFVAENQGMDVDKVDVTVVGGHAGTTIMPLLSQVQGAKFSEEDIKALTHRIQFGGDEVVQAKDGAGSATLSMAHAGAYFAGKVLDGLNGVQGVKECAFVESDLTDAPFFASPVSLGKDGVSEVHGFGSLSGFEQSLVDENVPALIKQAQKGSDFVKSN 678
            DDLFNTNASIVKGIA+QC+KSCPKACFLIISNPVNSTVPIFA+VLKA+GVY+P KLMGVTTLDV RAKTFVAENQGMDVDKV+V V+GGHAGTTIMPLLSQV+GA F+EEDIK LTHRIQFGGDEVV+AKDGAGSATLSMAHAGAYFA KVLDGLNGV+G+KEC FVES LT APFFASP +LG +GVSE+HG+G LS FEQ+LVDENVPAL+K +QKG DFVK+N
Sbjct:  124 DDLFNTNASIVKGIAEQCAKSCPKACFLIISNPVNSTVPIFAEVLKASGVYDPAKLMGVTTLDVARAKTFVAENQGMDVDKVEVDVIGGHAGTTIMPLLSQVKGANFTEEDIKTLTHRIQFGGDEVVKAKDGAGSATLSMAHAGAYFAEKVLDGLNGVKGIKECTFVESPLTSAPFFASPCTLGTEGVSEIHGYGQLSPFEQALVDENVPALVKMSQKGIDFVKNN 349          
BLAST of mRNA_S-firma_F_contig10857.1145.1 vs. uniprot
Match: A0A097IUN2_SACJA (Malate dehydrogenase n=3 Tax=Laminariales TaxID=2886 RepID=A0A097IUN2_SACJA)

HSP 1 Score: 384 bits (985), Expect = 8.580e-132
Identity = 191/226 (84.51%), Postives = 208/226 (92.04%), Query Frame = 1
Query:    1 DDLFNTNASIVKGIADQCSKSCPKACFLIISNPVNSTVPIFADVLKANGVYNPQKLMGVTTLDVCRAKTFVAENQGMDVDKVDVTVVGGHAGTTIMPLLSQVQGAKFSEEDIKALTHRIQFGGDEVVQAKDGAGSATLSMAHAGAYFAGKVLDGLNGVQGVKECAFVESDLTDAPFFASPVSLGKDGVSEVHGFGSLSGFEQSLVDENVPALIKQAQKGSDFVKSN 678
            DDLFNTNASIVKGIA+Q SKSCP AC LIISNPVNSTVPIFADVLKANGVYNPQKLMGVTTLDV RAKTFVAE+QGMDV K+ V V+GGHAGTTIMPLLSQV+GAKF+EEDI ALTHRIQFGGDEVVQAKDGAGSATLSMAHAGAYFAG+VLDGLNG + VKEC FV+ DLTDAPFFASP +LG DGVS++HGF +L+ FEQSLVDENVP+LI  A+KGSDFVK+N
Sbjct:  124 DDLFNTNASIVKGIAEQVSKSCPNACILIISNPVNSTVPIFADVLKANGVYNPQKLMGVTTLDVVRAKTFVAEHQGMDVSKIKVDVIGGHAGTTIMPLLSQVKGAKFTEEDIAALTHRIQFGGDEVVQAKDGAGSATLSMAHAGAYFAGRVLDGLNGKKNVKECTFVDCDLTDAPFFASPCTLGTDGVSKIHGFSNLTPFEQSLVDENVPSLISMAKKGSDFVKNN 349          
BLAST of mRNA_S-firma_F_contig10857.1145.1 vs. uniprot
Match: A0A097IUI7_9PHAE (Malate dehydrogenase n=1 Tax=Ishige okamurae TaxID=233772 RepID=A0A097IUI7_9PHAE)

HSP 1 Score: 382 bits (980), Expect = 5.470e-131
Identity = 187/226 (82.74%), Postives = 211/226 (93.36%), Query Frame = 1
Query:    1 DDLFNTNASIVKGIADQCSKSCPKACFLIISNPVNSTVPIFADVLKANGVYNPQKLMGVTTLDVCRAKTFVAENQGMDVDKVDVTVVGGHAGTTIMPLLSQVQGAKFSEEDIKALTHRIQFGGDEVVQAKDGAGSATLSMAHAGAYFAGKVLDGLNGVQGVKECAFVESDLTDAPFFASPVSLGKDGVSEVHGFGSLSGFEQSLVDENVPALIKQAQKGSDFVKSN 678
            DDLFNTNASIVKGIA+QC+KSCPKACFLIISNPVNSTVPIFADVLK+ GV++P KLMGVTTLDVCRAKTFVAENQGMDVDKV+V V+GGHAGTTIMPLLSQ+ GAKFS+EDIKALTHRIQFGGDEVV+AKDGAGSATLSMAHAGAYFAG+VLDGL+G   +KEC FVE D+TDAPFFASP +LGK+GVSE+HGF +LS FEQ+LVD+NV +L K A+KGSDFVK++
Sbjct:  126 DDLFNTNASIVKGIAEQCAKSCPKACFLIISNPVNSTVPIFADVLKSAGVFHPGKLMGVTTLDVCRAKTFVAENQGMDVDKVEVDVIGGHAGTTIMPLLSQIPGAKFSDEDIKALTHRIQFGGDEVVKAKDGAGSATLSMAHAGAYFAGRVLDGLDGQADIKECTFVECDITDAPFFASPCTLGKEGVSEIHGFKNLSSFEQALVDDNVDSLKKMAKKGSDFVKNS 351          
BLAST of mRNA_S-firma_F_contig10857.1145.1 vs. uniprot
Match: A0A097IUM5_9PHAE (Malate dehydrogenase n=1 Tax=Desmarestia viridis TaxID=62313 RepID=A0A097IUM5_9PHAE)

HSP 1 Score: 379 bits (973), Expect = 5.730e-130
Identity = 186/226 (82.30%), Postives = 208/226 (92.04%), Query Frame = 1
Query:    1 DDLFNTNASIVKGIADQCSKSCPKACFLIISNPVNSTVPIFADVLKANGVYNPQKLMGVTTLDVCRAKTFVAENQGMDVDKVDVTVVGGHAGTTIMPLLSQVQGAKFSEEDIKALTHRIQFGGDEVVQAKDGAGSATLSMAHAGAYFAGKVLDGLNGVQGVKECAFVESDLTDAPFFASPVSLGKDGVSEVHGFGSLSGFEQSLVDENVPALIKQAQKGSDFVKSN 678
            DDLFNTNASIVKGIA+QCSKSCP ACFLIISNPVNSTVPIF DVLKANGV+NP KLMGVT+LDV RAKTFVAE+QG+DV K+ V V+GGHAGTTI+PLLS+V+GA F+EEDIKALTHRIQFGGDEVVQAKDGAGSATLSMAHAGAYFAG+VLDGLNGV+ VKEC FVE DLTDAPFFASP +LGKDGVS++HGF  L+ FEQ+LVD+NVP LI  A+KGS+FVK+N
Sbjct:  124 DDLFNTNASIVKGIAEQCSKSCPNACFLIISNPVNSTVPIFGDVLKANGVFNPAKLMGVTSLDVVRAKTFVAEHQGLDVSKMKVDVIGGHAGTTIIPLLSKVKGADFTEEDIKALTHRIQFGGDEVVQAKDGAGSATLSMAHAGAYFAGRVLDGLNGVKNVKECTFVECDLTDAPFFASPCTLGKDGVSKIHGFSKLTPFEQALVDDNVPTLINMAKKGSEFVKNN 349          
BLAST of mRNA_S-firma_F_contig10857.1145.1 vs. uniprot
Match: A0A835YGB7_9STRA (Malate dehydrogenase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YGB7_9STRA)

HSP 1 Score: 330 bits (846), Expect = 1.050e-110
Identity = 164/223 (73.54%), Postives = 192/223 (86.10%), Query Frame = 1
Query:    1 DDLFNTNASIVKGIADQCSKSCPKACFLIISNPVNSTVPIFADVLKANGVYNPQKLMGVTTLDVCRAKTFVAENQGMDVDKVDVTVVGGHAGTTIMPLLSQVQGAKFSEEDIKALTHRIQFGGDEVVQAKDGAGSATLSMAHAGAYFAGKVLDGLNGVQGVKECAFVESDLTDAPFFASPVSLGKDGVSEVHGFGSLSGFEQSLVDENVPALIKQAQKGSDFV 669
            DDLFNTNA IVKGIA+ C+++CPKA FLIISNPVNSTVPIFA+VLK  GVY+ +KLMGVTTLDVCRA+TFVAEN G  V+   V V+GGHAGTTI+PLLSQV+GAKFS++D++ALTHRIQFGGDEVV+AKDGAGSATLSMAHAGAYFA +VL  + G   ++EC FVE+DLT AP+FA+PV LGKDGV +V GFG LS FEQ ++DENVPAL  QA+KG DFV
Sbjct:  122 DDLFNTNAGIVKGIAEACAEACPKARFLIISNPVNSTVPIFAEVLKGRGVYDKKKLMGVTTLDVCRAQTFVAENLGQSVNDTAVDVIGGHAGTTILPLLSQVEGAKFSDKDLEALTHRIQFGGDEVVKAKDGAGSATLSMAHAGAYFAIRVLAAMEGEADIRECTFVENDLTAAPYFATPVILGKDGVEKVLGFGKLSAFEQKILDENVPALQAQAKKGVDFV 344          
BLAST of mRNA_S-firma_F_contig10857.1145.1 vs. uniprot
Match: F0YJC9_AURAN (Malate dehydrogenase n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YJC9_AURAN)

HSP 1 Score: 324 bits (830), Expect = 1.900e-108
Identity = 158/223 (70.85%), Postives = 189/223 (84.75%), Query Frame = 1
Query:    1 DDLFNTNASIVKGIADQCSKSCPKACFLIISNPVNSTVPIFADVLKANGVYNPQKLMGVTTLDVCRAKTFVAENQGMDVDKVDVTVVGGHAGTTIMPLLSQVQGAKFSEEDIKALTHRIQFGGDEVVQAKDGAGSATLSMAHAGAYFAGKVLDGLNGVQGVKECAFVESDLTDAPFFASPVSLGKDGVSEVHGFGSLSGFEQSLVDENVPALIKQAQKGSDFV 669
            DDLFNTNASIV+ +A+ C+ +CP ACFLII+NPVNSTVPIFA+ LK +GVY+  KL GVTTLDV RAKTFVAENQG DV   DV V+GGHAGTTI+PLLSQ++GA FS++DI  LTHRI FGGDEVVQAKDGAGSATLSMA+AGA+F  KVL+ LNG  G+ ECAFVESD+TDAP+F+SPV+LGK+GV  +HG+G+LS FEQ ++D+ VP LI QA+KG  FV
Sbjct:  105 DDLFNTNASIVQSLAEACATTCPNACFLIIANPVNSTVPIFAETLKKHGVYDKNKLFGVTTLDVVRAKTFVAENQGGDVLNTDVDVIGGHAGTTILPLLSQIEGASFSQDDIDKLTHRIMFGGDEVVQAKDGAGSATLSMAYAGAHFTFKVLEALNGATGITECAFVESDVTDAPYFSSPVTLGKNGVETIHGYGTLSPFEQDVLDKAVPDLIAQAEKGVKFV 327          
BLAST of mRNA_S-firma_F_contig10857.1145.1 vs. uniprot
Match: A0A7S0L929_9EUKA (Malate dehydrogenase (Fragment) n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0L929_9EUKA)

HSP 1 Score: 308 bits (790), Expect = 1.370e-102
Identity = 154/225 (68.44%), Postives = 188/225 (83.56%), Query Frame = 1
Query:    1 DDLFNTNASIVKGIADQCSKSCPKACFLIISNPVNSTVPIFADVLKANGVYNPQKLMGVTTLDVCRAKTFVAENQGMDVDKVDVTVVGGHAGTTIMPLLSQVQGAKFSEEDIKALTHRIQFGGDEVVQAKDGAGSATLSMAHAGAYFAGKVLDGLNGVQGVKECAFVESDLTDAPFFASPVSLGKDGVSEVHGFGSLSGFEQSLVDENVPALIKQAQKGSDFVKS 675
            DDLFNTNASIV+G+A+ C+KSCP A FLIISNPVNSTVPIFA+ LK +GVYNP+KL GVTTLDV RA TFV+ENQGMDV+  +V V+GGHAGTTI+PLLSQV GAKFSEE+++ LTHRIQFGGDEVV+AKDGAGSATLSMA+AG  F  ++L  ++G   V EC+FVE++LT APFF++PV LG +GV EV  +G+LS  EQ+ +D  VP L+ QA+KG DFVK+
Sbjct:   95 DDLFNTNASIVQGLAEACAKSCPDAMFLIISNPVNSTVPIFAETLKKHGVYNPRKLFGVTTLDVVRANTFVSENQGMDVNNTNVRVIGGHAGTTILPLLSQVPGAKFSEENVQNLTHRIQFGGDEVVKAKDGAGSATLSMAYAGQQFTSRLLAAISGEANVVECSFVENNLTAAPFFSTPVRLGPNGVEEVLHYGTLSKAEQATLDAMVPDLVAQAKKGVDFVKN 319          
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10857.1145.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A097IUM6_9PHAE1.850e-14794.69Malate dehydrogenase n=1 Tax=Punctaria latifolia T... [more]
D8LQM3_ECTSI2.150e-14691.15Malate dehydrogenase n=7 Tax=Eukaryota TaxID=2759 ... [more]
A0A097IUP2_9PHAE1.630e-13485.40Malate dehydrogenase n=1 Tax=Dictyopteris undulata... [more]
A0A097IUQ0_9PHAE1.280e-13384.51Malate dehydrogenase n=8 Tax=Sargassum TaxID=3015 ... [more]
A0A097IUN2_SACJA8.580e-13284.51Malate dehydrogenase n=3 Tax=Laminariales TaxID=28... [more]
A0A097IUI7_9PHAE5.470e-13182.74Malate dehydrogenase n=1 Tax=Ishige okamurae TaxID... [more]
A0A097IUM5_9PHAE5.730e-13082.30Malate dehydrogenase n=1 Tax=Desmarestia viridis T... [more]
A0A835YGB7_9STRA1.050e-11073.54Malate dehydrogenase n=1 Tax=Tribonema minus TaxID... [more]
F0YJC9_AURAN1.900e-10870.85Malate dehydrogenase n=1 Tax=Aureococcus anophagef... [more]
A0A7S0L929_9EUKA1.370e-10268.44Malate dehydrogenase (Fragment) n=1 Tax=Coccolithu... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_F_contig10857contigS-firma_F_contig10857:768..4745 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef902022-09-19
OGS1.0 of Sphaerotrichia firma ET2_F female2021-02-24
Properties
Property NameValue
Seed ortholog2880.D8LQM3
Preferred nameMDH2
PFAMsLdh_1_C,Ldh_1_N
Max annot lvl2759|Eukaryota
KEGG rclassRC00031
KEGG koko:K00026,ko:K03283
KEGG TC1.A.33.1
KEGG ReactionR00342,R07136
KEGG Pathwayko00020,ko00270,ko00620,ko00630,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko03040,ko04010,ko04141,ko04144,ko04213,ko04612,ko04915,ko05134,ko05145,ko05162,ko05164,ko05169,map00020,map00270,map00620,map00630,map00710,map01100,map01110,map01120,map01130,map01200,map03040,map04010,map04141,map04144,map04213,map04612,map04915,map05134,map05145,map05162,map05164,map05169
KEGG ModuleM00009,M00011,M00012,M00168,M00171,M00353,M00355
GOsGO:0002165,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005759,GO:0005975,GO:0005996,GO:0006006,GO:0006082,GO:0006091,GO:0006094,GO:0006099,GO:0006101,GO:0006107,GO:0006108,GO:0006139,GO:0006464,GO:0006473,GO:0006475,GO:0006725,GO:0006732,GO:0006733,GO:0006734,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006919,GO:0007275,GO:0007431,GO:0007435,GO:0007552,GO:0008150,GO:0008152,GO:0008219,GO:0009058,GO:0009060,GO:0009117,GO:0009653,GO:0009791,GO:0009886,GO:0009887,GO:0009893,GO:0009987,GO:0010604,GO:0010623,GO:0010941,GO:0010942,GO:0010950,GO:0010952,GO:0012501,GO:0015980,GO:0016020,GO:0016051,GO:0016491,GO:0016614,GO:0016615,GO:0016616,GO:0016999,GO:0017144,GO:0019222,GO:0019318,GO:0019319,GO:0019362,GO:0019538,GO:0019637,GO:0019674,GO:0019752,GO:0022612,GO:0030060,GO:0030154,GO:0030162,GO:0031323,GO:0031325,GO:0031974,GO:0032268,GO:0032270,GO:0032501,GO:0032502,GO:0034641,GO:0035069,GO:0035070,GO:0035071,GO:0035096,GO:0035209,GO:0035272,GO:0036211,GO:0042802,GO:0042803,GO:0042981,GO:0043065,GO:0043067,GO:0043068,GO:0043085,GO:0043170,GO:0043209,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043280,GO:0043281,GO:0043412,GO:0043436,GO:0043543,GO:0043621,GO:0043648,GO:0044093,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0045333,GO:0045862,GO:0046364,GO:0046483,GO:0046496,GO:0046554,GO:0046983,GO:0048102,GO:0048468,GO:0048513,GO:0048518,GO:0048522,GO:0048707,GO:0048731,GO:0048732,GO:0048856,GO:0048869,GO:0050789,GO:0050790,GO:0050794,GO:0051087,GO:0051171,GO:0051173,GO:0051186,GO:0051246,GO:0051247,GO:0051336,GO:0051345,GO:0052547,GO:0052548,GO:0055086,GO:0055114,GO:0060033,GO:0060255,GO:0065007,GO:0065009,GO:0070013,GO:0071704,GO:0072350,GO:0072524,GO:0080090,GO:1901360,GO:1901564,GO:1901576,GO:2000116,GO:2001056
Evalue3.52e-147
EggNOG OGsCOG0039@1|root,KOG1494@2759|Eukaryota
EC1.1.1.37
DescriptionL-malate dehydrogenase activity
COG categoryC
BRITEko00000,ko00001,ko00002,ko01000,ko01009,ko03009,ko03029,ko03041,ko03051,ko03110,ko04131,ko04147,ko04516
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionmalate dehydrogenase
Ec32 orthologEc-10_006200.1
Exons6
Model size681
Cds size681
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_F_contig10857.1145.1prot_S-firma_F_contig10857.1145.1Sphaerotrichia firma ET2_F femalepolypeptideS-firma_F_contig10857 768..4745 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815629.3337626-CDS-S-firma_F_contig10857:767..9081622815629.3337626-CDS-S-firma_F_contig10857:767..908Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10857 768..908 -
1696949465.0793076-CDS-S-firma_F_contig10857:767..9081696949465.0793076-CDS-S-firma_F_contig10857:767..908Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10857 768..908 -
1622815629.3469265-CDS-S-firma_F_contig10857:1794..19141622815629.3469265-CDS-S-firma_F_contig10857:1794..1914Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10857 1795..1914 -
1696949465.0993474-CDS-S-firma_F_contig10857:1794..19141696949465.0993474-CDS-S-firma_F_contig10857:1794..1914Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10857 1795..1914 -
1622815629.3596838-CDS-S-firma_F_contig10857:2623..27401622815629.3596838-CDS-S-firma_F_contig10857:2623..2740Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10857 2624..2740 -
1696949465.111435-CDS-S-firma_F_contig10857:2623..27401696949465.111435-CDS-S-firma_F_contig10857:2623..2740Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10857 2624..2740 -
1622815629.3718593-CDS-S-firma_F_contig10857:3361..34381622815629.3718593-CDS-S-firma_F_contig10857:3361..3438Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10857 3362..3438 -
1696949465.1198025-CDS-S-firma_F_contig10857:3361..34381696949465.1198025-CDS-S-firma_F_contig10857:3361..3438Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10857 3362..3438 -
1622815629.3841376-CDS-S-firma_F_contig10857:4059..41471622815629.3841376-CDS-S-firma_F_contig10857:4059..4147Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10857 4060..4147 -
1696949465.1284258-CDS-S-firma_F_contig10857:4059..41471696949465.1284258-CDS-S-firma_F_contig10857:4059..4147Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10857 4060..4147 -
1622815629.3951347-CDS-S-firma_F_contig10857:4607..47451622815629.3951347-CDS-S-firma_F_contig10857:4607..4745Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10857 4608..4745 -
1696949465.136721-CDS-S-firma_F_contig10857:4607..47451696949465.136721-CDS-S-firma_F_contig10857:4607..4745Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10857 4608..4745 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-firma_F_contig10857.1145.1

>prot_S-firma_F_contig10857.1145.1 ID=prot_S-firma_F_contig10857.1145.1|Name=mRNA_S-firma_F_contig10857.1145.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=227bp
DDLFNTNASIVKGIADQCSKSCPKACFLIISNPVNSTVPIFADVLKANGV
YNPQKLMGVTTLDVCRAKTFVAENQGMDVDKVDVTVVGGHAGTTIMPLLS
QVQGAKFSEEDIKALTHRIQFGGDEVVQAKDGAGSATLSMAHAGAYFAGK
VLDGLNGVQGVKECAFVESDLTDAPFFASPVSLGKDGVSEVHGFGSLSGF
EQSLVDENVPALIKQAQKGSDFVKSN*
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mRNA from alignment at S-firma_F_contig10857:768..4745-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-firma_F_contig10857.1145.1 ID=mRNA_S-firma_F_contig10857.1145.1|Name=mRNA_S-firma_F_contig10857.1145.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=3978bp|location=Sequence derived from alignment at S-firma_F_contig10857:768..4745- (Sphaerotrichia firma ET2_F female)
GATGATCTTTTCAACACGAACGCGTCGATCGTCAAGGGCATCGCCGACCA GTGCTCCAAGAGCTGTCCCAAGGCGTGCTTCCTCATAATCTCCAACCCGG TCAACTCCACCGTGCCTATCTTCGCGGACGTCCTCAAGGTTCGGCTGACA GTCCCGTTGAAGGCTCCGTTGTCCCACGCGTGTATGCGGAGGCTTGCCCC GTCGCAGCCCTTGTGTATGTAGCCTGGAAGGAGAGGAAGGGTCATACGGC TGTTGTAATGGGAGGCGCATCTTACCGTCGAAGCATCCCGTACGCGCACC CGGCGCACCCGCAACCGCGATTCCATGATGCCTTTGCTTGCTTTCCTCGG AAGGTACCGCCAACCGCGATTTCATCATGTATTTGCTTGCTTTCCACGGA AGGTACCGCCAACCGCGATTTCATCATGTATTTGCTTGCTTTCCACGGAA GGTACTGCCAACCGCGATTCCGTCACGTCTTCTTGCTTGCTTTCCACGGA AGGTAGGTATACCGCCCCGTTTACCACGCTCGGTGCTTGCTGGCGGTATT GCCACTGCTGTTGCCGTCGCCGCCGTCGTTGTCGTGCGTCGATACCAGGC GAACGGCGTGTATAACCCGCAGAAGCTGATGGGCGTCACTACCCTGGACG TGTGCCGCGCCAAGACCTTCGTGGCAGAAAACCAGGGTGAGTGAGGGGTC GAGGGTAAAAAGGGGATGAGGAAGAGGGCACACGTGCACTTAAGGTAAAG GCTCGTTTTGGGTGTTGTCGTGGACGTGACAAGGAAAAAGTAGGTTTTCT TCGAGGACACCAAAGGGCGGTGCATCCATGTCCTACATGTATACGTGTAT ACCTTTGGGTTTTTTTTTCGCTAGGCATGCCCTTGAGGCGGTGGCGTTGG TGTTGGTGTTGGAGCGGCGGTTGTCGAAAACATCAACATTTGGGATACTT ATGCTGCAGCAGCTGCATAAGTTAGGTACCTTGCAAGTTGCGGATGGCGC CTGCCTGATTGGCGTTAGCCCGATGTCTTACCAAAGGTGCTGTATTGTCG TTGGTCGTTTCGCCGACCTAGACCTTCGGTGTCGCGTGTGCTGTGCGTGT TTTTTCTCTTAAACTCCCCCAGTGCCTCGTCAACGCCACTTGGTTGTACA GCGAGATAGTGCTGTGCCCGTGCAGCTCGTTCCTAGCCCCCTCTGCGCAT GCCGTCCTGCACCTCACGTGCCTCTCTTTGGGTCCCTTGGACACGTCCTG TCGCTCGATGACGTGTGGTTCTTCCATGCCGTGTGGTGTGATGCGATTAT TTACCAGGGATGGACGTGGACAAGGTCGACGTTACCGTCGTGGGAGGACA CGCGGGCACCACCATCATGCCTCTTCTTTCGCAGGTGCGATGCTGCTCCG CTGTGTCTCTCGTCTATTTTCCATTTCCTGCGTGTGTCTCTGCTGTTTCC GTTTCTTGTTTTTGCACCTTCGGGCAATCGTTCGCGCGCGCGCTTGTAGG ATAGTACGATGGCACCGGCGCGATCGACCTAAATTAGCTTTGCTGCTGTG CTGCTCTACTGCGAAGAGAGGCCAAGATTGTGTTAACGTAGCGAATCTTA AAAGAAAACGTTGGCGTGTTACGGCGCACGCGCGCGTGCGGCGAGCAACC ACAACCGACCACTTTTAAATAAATTTTCTACTTTTTTGATACATTTTCTA CATTCGTCAGCCGAATACGTCCGTCCTGTGAATAAGTAGTTCCAGGCGTA CTGACTGTTGTATACACACTAACCCTCCCCGTCCCAGCCAACAGCACCAA ATCCACAATCCGTTAGGTTTGTTGGTTGTTTAGTTTCGTAGTTTGCAAGG GGGCATGTTATTCAGCGTATGTGTGTCATCTTCCGTCGGTCACCAAAAGT GTAAAGATGTTGCTCTTGGTACACAATAGGGCAGCGTAACTTATAATTTC CAATTTCTACTTGTTTGTGCTTTTTTGCACCGTTGCCGACGGTGACGACG ACCAGGTGCAAGGGGCGAAGTTCTCGGAGGAGGACATCAAGGCGCTCACC CACCGCATCCAGTTCGGAGGAGACGAGGTGGTGCAGGCCAAGGACGGGGC TGGGTCGGCCACCCTCTCCATGGTGAGAGGGGAGAAGGAGAAGAGCGCGG CAAAGACAAAAAAAAATCAGCAAAAAAACGTGAAACAATCGAAGAAAAGT CATCGTCTATCCTCGAACTCGAACCGAGAAGATGGGCGCTCTTGCGGGAC GGTAGGGTAGCTGCCGGTGTCAACAGCCGGCTTTCGGCTTTCCGAGAGAG AAGACACGCAAGCGCCCTCGTGCGTGGAGGTGTGCTTTGCATGCGGCGTT TTGTTGGTGGAACTGGTGACGCGTGGAATAGCTCGGTCGAAGGCAGTTGC CAACGCGTCCAGCCTGCGTGCACCCTTGGAAGAAACAACACTGGCTAGCG AGCCCTTGGCAAGAGCCGGTGGCTTCCAAGTCGAGCGTGGCCGCCGAGCT TTTGCGCGCCAAGCTTGCTTTGCGACCCCTGAGAGAGATGCCTGAGACAC CCGGTTGAGCTGGAGACAGAGATTTTTAGATTTGTGTCGTACCTGCGCAG AGAAGAGGGTGGACGAACACACGGACGCGCAACGGTTTGCGAAATCAGCC GGTAAATTAGAGCAGAACGCCGCCGCCGCCACCCGCTGAATATTTGGGCG GTGCATGTACGACGTGTGAAGTTGGTATGCACGTAGGTATGCACGTTGCT TTCGCTTCTTTTTTTTTTGGCTCGTTGGCAACGTGGGCACCCACCCAACC CGTCTGCCCTTTCACCCCCTTGCTGCAACAGGCGCACGCGGGCGCGTACT TCGCGGGCAAGGTGCTGGACGGGCTGAACGGCGTGCAGGGCGTCAAGGAG TGCGCTTTCGTGGAGAGCGACCTCACGGATGCCCCTTTCTTTGCGTCTCC GGTGAGTGCCGCGCCTCACTGTTCGGTTTTGGTGTGTGTGTGTGTGTCTG TGTGTCTTTGGGTGTGTTCTTCCCATCTAGTTTGGTGACAGCCCCTCCGA TCAAGGTGAGACGTGTACTTCACTTTGCGGTGTATTCAGAGGACACACTT TGCAGCGTATTTTCTGTCCATCCGAACCAACCGGGGTCACACAGGAGAGG CCGAACACTGGGGCGTTCGGTACCAGCCTTAGAAGCAGAAATAAAACCTG TACATGTAAGCTGCGGGTGACTGAGATAGTTGTAGCGGGTGACTGGGATA GTTGTAACGGGTCAAGGAAGGTCAGAAGTGTGTATACAACCCAGTCCAGT CCCCCTGAAACGAGTTCTTCACAAGTTGGACCGTACACGGCTGATTGCAG AAACATTATGTTGTGAAAACCATCGGCTTCTGTATCGCGTGGCATAGCCC TGTCGTGTAGTGTCCTTCATGGCCTTCATGGGGGCGCCGTGTAATGTCTT TCACGGGGGCGCCGTCCCCTGTTTTCTTGGTCGCTGTTCCTCGTGACTTG CGGGTTCTCTTCTCCTCTTAAAGCGTGGCACAGTAGTCCTGTCGTGTACT TTCCTTCATGGGGGCACCGTGTGGTGTCCTTTATGGGGGCGCCGTCCCCT GCCTCCTTGGTCGCTGTTCCGCGTGAATTGTGGGTTTATCTTCTCCTCTG CCTCGAACCACTGCTGTGTCGGCTCATTGGACGCTGATCAGTTTCTTTGC GGCGACGATTGTGCCCAGTTTCTGTGACCACGAGCTCCCATGGATGTTTT TGGAATATAGAGCTAATGTGATAAACAAACAAAACAAAACTTCCCCCCTG CGACACCTTTCTGTGCCTGAACGTGGTCGTAAATTAGGTGAGCTTGGGCA AGGACGGCGTGAGCGAGGTCCACGGGTTCGGCAGCCTGTCCGGTTTCGAG CAATCCCTCGTGGACGAGAACGTGCCGGCGCTCATCAAGCAGGCGCAGAA GGGCTCTGATTTCGTCAAGAGCAACTAA
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Coding sequence (CDS) from alignment at S-firma_F_contig10857:768..4745-

>mRNA_S-firma_F_contig10857.1145.1 ID=mRNA_S-firma_F_contig10857.1145.1|Name=mRNA_S-firma_F_contig10857.1145.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=1362bp|location=Sequence derived from alignment at S-firma_F_contig10857:768..4745- (Sphaerotrichia firma ET2_F female)
GATGATCTTTTCAACACGAACGCGTCGATCGTCAAGGGCATCGCCGACCA
GTGCTCCAAGAGCTGTCCCAAGGCGTGCTTCCTCATAATCTCCAACCCGG
TCAACTCCACCGTGCCTATCTTCGCGGACGTCCTCAAGGATGATCTTTTC
AACACGAACGCGTCGATCGTCAAGGGCATCGCCGACCAGTGCTCCAAGAG
CTGTCCCAAGGCGTGCTTCCTCATAATCTCCAACCCGGTCAACTCCACCG
TGCCTATCTTCGCGGACGTCCTCAAGGCGAACGGCGTGTATAACCCGCAG
AAGCTGATGGGCGTCACTACCCTGGACGTGTGCCGCGCCAAGACCTTCGT
GGCAGAAAACCAGGGCGAACGGCGTGTATAACCCGCAGAAGCTGATGGGC
GTCACTACCCTGGACGTGTGCCGCGCCAAGACCTTCGTGGCAGAAAACCA
GGGGATGGACGTGGACAAGGTCGACGTTACCGTCGTGGGAGGACACGCGG
GCACCACCATCATGCCTCTTCTTTCGCAGGGATGGACGTGGACAAGGTCG
ACGTTACCGTCGTGGGAGGACACGCGGGCACCACCATCATGCCTCTTCTT
TCGCAGGTGCAAGGGGCGAAGTTCTCGGAGGAGGACATCAAGGCGCTCAC
CCACCGCATCCAGTTCGGAGGAGACGAGGTGGTGCAGGCCAAGGACGGGG
CTGGGTCGGCCACCCTCTCCATGGTGCAAGGGGCGAAGTTCTCGGAGGAG
GACATCAAGGCGCTCACCCACCGCATCCAGTTCGGAGGAGACGAGGTGGT
GCAGGCCAAGGACGGGGCTGGGTCGGCCACCCTCTCCATGGCGCACGCGG
GCGCGTACTTCGCGGGCAAGGTGCTGGACGGGCTGAACGGCGTGCAGGGC
GTCAAGGAGTGCGCTTTCGTGGAGAGCGACCTCACGGATGCCCCTTTCTT
TGCGTCTCCGGCGCACGCGGGCGCGTACTTCGCGGGCAAGGTGCTGGACG
GGCTGAACGGCGTGCAGGGCGTCAAGGAGTGCGCTTTCGTGGAGAGCGAC
CTCACGGATGCCCCTTTCTTTGCGTCTCCGGTGAGCTTGGGCAAGGACGG
CGTGAGCGAGGTCCACGGGTTCGGCAGCCTGTCCGGTTTCGAGCAATCCC
TCGTGGACGAGAACGTGCCGGCGCTCATCAAGCAGGCGCAGAAGGGCTCT
GATTTCGTCAAGAGCAACTAAGTGAGCTTGGGCAAGGACGGCGTGAGCGA
GGTCCACGGGTTCGGCAGCCTGTCCGGTTTCGAGCAATCCCTCGTGGACG
AGAACGTGCCGGCGCTCATCAAGCAGGCGCAGAAGGGCTCTGATTTCGTC
AAGAGCAACTAA
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