mRNA_S-firma_F_contig10853.1142.1 (mRNA) Sphaerotrichia firma ET2_F female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-firma_F_contig10853.1142.1
Unique NamemRNA_S-firma_F_contig10853.1142.1
TypemRNA
OrganismSphaerotrichia firma ET2_F female (Sphaerotrichia firma ET2_F female)
Homology
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BLAST of mRNA_S-firma_F_contig10853.1142.1 vs. uniprot
Match: A0A7R9ZA87_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9ZA87_9STRA)

HSP 1 Score: 362 bits (928), Expect = 5.250e-124
Identity = 190/232 (81.90%), Postives = 208/232 (89.66%), Query Frame = 3 
Query:   81 MVESVRNLAMLGVQLTVEERNLLSVAYKNVVGARRASWRVLSSIESKERDKSETERASEVAAYRAKVEAELEKICEELLRILEDCLLPKDSTTEGQVFYWKMAGDYYRYLAEFASGEDRKAKASNAQQKYEEATKSGQSLPATNPIRLGLALNYSVFYYEILNQPSEACTLAKSAFDDAISELDRLPEEEYKDATLIMQLIRDNLTLWTSDT--PDDSNKPADDGTNVEDLD 770
            MVE VR LA LGVQLTVEERNLLSVAYKNVVGARRASWRVLSSIE+KE++K E++ A++V++YRAKVE ELE ICEELL++LED LLPKD+TTEGQVFYWKMAGDYYRYLAEFA  +D+K KA  AQQKYEEATK+GQ+LPATNPIRLGLALNYSVFYYEIL  P  AC LAKSAFDDAISELDRLPEEEYKDATLIMQLIRDNLTLWTSDT  P+D  K ADDGTNV DL+
Sbjct:    1 MVEQVRTLAQLGVQLTVEERNLLSVAYKNVVGARRASWRVLSSIEAKEKEKGESDHATQVSSYRAKVETELENICEELLKLLEDFLLPKDNTTEGQVFYWKMAGDYYRYLAEFAQSDDKKTKAGKAQQKYEEATKNGQALPATNPIRLGLALNYSVFYYEILGDPERACALAKSAFDDAISELDRLPEEEYKDATLIMQLIRDNLTLWTSDTSQPEDG-KGADDGTNVVDLE 231
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BLAST of mRNA_S-firma_F_contig10853.1142.1 vs. uniprot
Match: A0A397G8L3_9GLOM (14_3_3 domain-containing protein n=16 Tax=Eukaryota TaxID=2759 RepID=A0A397G8L3_9GLOM)

HSP 1 Score: 297 bits (760), Expect = 4.430e-98
Identity = 155/250 (62.00%), Postives = 193/250 (77.20%), Query Frame = 3 
Query:   15 IMSRESLVYGAKLAEEAERYDDMVESVRNLAMLGVQLTVEERNLLSVAYKNVVGARRASWRVLSSIESKERDKSETERASEVAAYRAKVEAELEKICEELLRILEDCLLPKDSTTEGQVFYWKMAGDYYRYLAEFASGEDRKAKASNAQQKYEEATKSGQS-LPATNPIRLGLALNYSVFYYEILNQPSEACTLAKSAFDDAISELDRLPEEEYKDATLIMQLIRDNLTLWTSDTPDDSNKPADDGTNVE 761
            +  RE+ VY AKLAE+AERYD+MV  ++++A LGV+LTVEERNLLSVAYKNV+GARRASWR++SSIE KE +K    + S++ AYR KVEAEL ++C ++L +L+  L+P     E +VFY+KM GDY+RYLAEFASGE RK  A+ A + Y+ AT   Q+ L  T+PIRLGLALN+SVFYYEILN P  AC LAK AFDDAI+ELD L EE YKD+TLIMQL+RDNLTLWTSD  +D+ KP +    VE
Sbjct:    4 VHDRENQVYMAKLAEQAERYDEMVSYMKDVAKLGVELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEENKGNETQVSKIKAYRQKVEAELSEVCSDILAVLDGHLIPSAEAGESKVFYYKMKGDYHRYLAEFASGERRKEAATQAHEAYKHATDIAQTDLAPTHPIRLGLALNFSVFYYEILNSPDRACHLAKQAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDLAEDAEKPEESKPEVE 253
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BLAST of mRNA_S-firma_F_contig10853.1142.1 vs. uniprot
Match: A0A7S1G9W5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1G9W5_9STRA)

HSP 1 Score: 293 bits (751), Expect = 5.600e-97
Identity = 162/240 (67.50%), Postives = 184/240 (76.67%), Query Frame = 3 
Query:   57 EEAERYDDMVESVRNLAMLGVQLTVEERNLLSVAYKNVVGARRASWRVLSSIESKERDKSETE------RASEVAAYRAKVEAELEKICEELLRILEDCLLPKDSTTEGQVFYWKMAGDYYRYLAEFASGEDRKAKASNAQQKYEEATK--SGQSLPATNPIRLGLALNYSVFYYEILNQPSEACTLAKSAFDDAISELDRLPEEEYKDATLIMQLIRDNLTLWTSDTPDDSNKPADDGT 752
            EEAERYDDMV +VR LA L  QL VEERNLLSVAYKNVVGARRASWRVLSSI +KE +  E E      +   +  YR KVE EL  IC +LL +L+  LLP D T EG+VFY KMAGDYYRYLAEFA G+ R+A+A  A++KY EA    + +SLP+TNPIRLGLALN+SVFYYEIL +P EAC LAK AFD AI+ELD LPEE+YKDATLIMQLIRDNLTLWTSD  DD   P +DGT
Sbjct:    1 EEAERYDDMVVNVRRLAELKEQLNVEERNLLSVAYKNVVGARRASWRVLSSIYTKETESREKEGGEPSKKEKFILDYRTKVEKELADICNQLLEVLDKFLLPNDGTPEGKVFYLKMAGDYYRYLAEFAKGDGREAQAREAEKKYREAVDLAASESLPSTNPIRLGLALNFSVFYYEILGKPQEACKLAKEAFDSAIAELDGLPEEQYKDATLIMQLIRDNLTLWTSDQGDDDKGPDNDGT 240
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BLAST of mRNA_S-firma_F_contig10853.1142.1 vs. uniprot
Match: A0A6J1HX76_CUCMA (14-3-3-like protein D isoform X1 n=5 Tax=Cucurbita TaxID=3660 RepID=A0A6J1HX76_CUCMA)

HSP 1 Score: 291 bits (745), Expect = 9.270e-96
Identity = 152/235 (64.68%), Postives = 183/235 (77.87%), Query Frame = 3 
Query:   24 RESLVYGAKLAEEAERYDDMVESVRNLAMLGVQLTVEERNLLSVAYKNVVGARRASWRVLSSIESKERDKSETERASEVAAYRAKVEAELEKICEELLRILEDCLLPKDSTTEGQVFYWKMAGDYYRYLAEFASGEDRKAKASNAQQKYEEATKSGQS-LPATNPIRLGLALNYSVFYYEILNQPSEACTLAKSAFDDAISELDRLPEEEYKDATLIMQLIRDNLTLWTSDTPDD 725
            RE+ VY AKLAE+AERYD+MVE+++N+A L V+LTVEERNLLSV YKNVVGARRASWR+LSSIE KE  K     A  +  YR KVE EL  IC++++ ++++ L+P  S  E  VFY+KM GDYYRYLAEF SG ++K  A  + + YE AT S +S LP T+PIRLGLALN+SVFYYEILN P  AC LAK AFD+AISELD L EE YKD+TLIMQL+RDNLTLWTSD P+D
Sbjct:    7 RENFVYVAKLAEQAERYDEMVEAMKNVAKLEVELTVEERNLLSVGYKNVVGARRASWRILSSIEQKEEAKGNEANAKRIKEYRQKVETELSGICDDIMTVIDEHLIPLASAGESTVFYYKMKGDYYRYLAEFKSGNEKKEAADQSMKAYEAATSSAESELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAISELDTLNEESYKDSTLIMQLLRDNLTLWTSDIPED 241
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BLAST of mRNA_S-firma_F_contig10853.1142.1 vs. uniprot
Match: A0A5A8CP36_CAFRO (14_3_3 domain-containing protein n=2 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8CP36_CAFRO)

HSP 1 Score: 290 bits (741), Expect = 3.510e-95
Identity = 168/263 (63.88%), Postives = 194/263 (73.76%), Query Frame = 3 
Query:   15 IMSRESLVYGAKLAEEAERYDDMVESVRNLAMLGVQLTVEERNLLSVAYKNVVGARRASWRVLSSIESKERDKSE-TERASEVAAYRAKVEAELEKICEELLRILEDCLLPKDSTTEGQVFYWKMAGDYYRYLAEFASGEDRKAKASNAQQKY----------EEATKSGQSLPATNPIRLGLALNYSVFYYEILNQPSEACTLAKSAFDDAISELDRLPEEEYKDATLIMQLIRDNLTLWTSDTPDDSNKPADDGTNVEDLD 770
            + +RE LVY A+LAEEAERY+DMVE V +LA L  QLTV+ERNLLSVAYKNVVGARRASWRVLSSIE+K+ ++ E +   + VA YRAKVE ELE++C  LL +L+  LLP D + EG VFY KMAGDY+RYLAEFA  + R A+A  A+  Y          +E   SG  L  TNPIRLGLALN+SVFYYEIL   ++AC+LAK AFD AISELD L E EYKDATLIMQLIRDNLTLWTSD  D      DDG NVEDLD
Sbjct:    1 MSTREDLVYKARLAEEAERYEDMVEHVSSLAELNEQLTVDERNLLSVAYKNVVGARRASWRVLSSIEAKDAERKEGSGHTALVAEYRAKVEKELEEVCGRLLTLLDTNLLPNDESREGAVFYLKMAGDYHRYLAEFAQADARSAQAGKAKDMYSRAEAAAEGKDEGKISGDPLKPTNPIRLGLALNFSVFYYEILGMHADACSLAKKAFDSAISELDGLDENEYKDATLIMQLIRDNLTLWTSDQTDG----GDDG-NVEDLD 258
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BLAST of mRNA_S-firma_F_contig10853.1142.1 vs. uniprot
Match: A0A388KJ72_CHABU (14_3_3 domain-containing protein n=2 Tax=Chara braunii TaxID=69332 RepID=A0A388KJ72_CHABU)

HSP 1 Score: 289 bits (740), Expect = 5.690e-95
Identity = 154/256 (60.16%), Postives = 189/256 (73.83%), Query Frame = 3 
Query:   18 MSRESLVYGAKLAEEAERYDDMVESVRNLAMLGVQLTVEERNLLSVAYKNVVGARRASWRVLSSIESKERDKSETERASEVAAYRAKVEAELEKICEELLRILEDCLLPKDSTTEGQVFYWKMAGDYYRYLAEFASGEDRKAKASNAQQKYEEATKSGQ-SLPATNPIRLGLALNYSVFYYEILNQPSEACTLAKSAFDDAISELDRLPEEEYKDATLIMQLIRDNLTLWTSDTPDDSNKPA---DDGTNVEDLDG 773
            +SRE  VY AKLAE+AERYD+MV+S++ +A L V+LTVEERNLLSV YKNV+GARRASWR++SSIE KE +K   +    +  YR KVE EL  IC ++L I+++ L+P   T E +VFY+KM GDYYRYLAEF SG +RK  A N+   Y+ A++     L  T+PIRLGLALN+SVFYYEILN P  AC LAK AFD+AI+ELD L EE YKD+TLIMQL+RDNLTLWTSD  DD        DDGT VE+ +G
Sbjct:    5 LSREHWVYMAKLAEQAERYDEMVDSMKKVAKLDVELTVEERNLLSVGYKNVIGARRASWRIMSSIEQKEDNKGNEQNVKRIREYRHKVEQELSSICNDILTIIDENLIPSSDTGESKVFYFKMKGDYYRYLAEFKSGNERKEAAENSLIAYKSASEIAMVDLAPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDLQDDGGDDVPKGDDGTRVEEAEG 260
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BLAST of mRNA_S-firma_F_contig10853.1142.1 vs. uniprot
Match: A0A6A5BN25_NAEFO (14_3_3 domain-containing protein n=3 Tax=Naegleria TaxID=5761 RepID=A0A6A5BN25_NAEFO)

HSP 1 Score: 290 bits (742), Expect = 6.510e-95
Identity = 149/251 (59.36%), Postives = 190/251 (75.70%), Query Frame = 3 
Query:   21 SRESLVYGAKLAEEAERYDDMVESVRNLAMLGVQLTVEERNLLSVAYKNVVGARRASWRVLSSIESKERDKSETERASEVAAYRAKVEAELEKICEELLRILEDCLLPKDSTTEGQVFYWKMAGDYYRYLAEFASGEDRKAKASNAQQKYEEATKSGQSLPATNPIRLGLALNYSVFYYEILNQPSEACTLAKSAFDDAISELDRLPEEEYKDATLIMQLIRDNLTLWTSDTPDDSNKPADDGTNVEDLDG 773
            SRE  V+ AKLAE+AERYD+MV+S++ +A L V+LTVEERNLLSVAYKNV+G+RRASWR+++SIE KE  K       ++  YR KVE EL  IC ++L IL+  L+P   + E +VF++KM GDY+RYLAEF +G+ RK  A+N+ + Y  ATK  + L  T+PIRLGLALN+SVFYYEILN P  AC LAK AFDDAI+ELD L EE YKD+TLI+QL+RDNLTLWTSD  ++ N    DG+ VED++G
Sbjct:   39 SREDNVFMAKLAEQAERYDEMVQSMKKVAQLDVELTVEERNLLSVAYKNVIGSRRASWRIINSIEQKEESKGNLHHVEKIKKYRGKVERELTDICNDILSILDQHLIPSSQSDESKVFHYKMKGDYHRYLAEFTTGDSRKEAANNSLEAYNTATKIAKELQTTHPIRLGLALNFSVFYYEILNSPQSACQLAKKAFDDAIAELDSLTEESYKDSTLILQLLRDNLTLWTSDMQEEKN----DGSKVEDVEG 285
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BLAST of mRNA_S-firma_F_contig10853.1142.1 vs. uniprot
Match: A0A834LLX7_RHOSS (14_3_3 domain-containing protein n=1 Tax=Rhododendron simsii TaxID=118357 RepID=A0A834LLX7_RHOSS)

HSP 1 Score: 293 bits (749), Expect = 6.600e-95
Identity = 149/238 (62.61%), Postives = 187/238 (78.57%), Query Frame = 3 
Query:   15 IMSRESLVYGAKLAEEAERYDDMVESVRNLAMLGVQLTVEERNLLSVAYKNVVGARRASWRVLSSIESKERDKSETERASEVAAYRAKVEAELEKICEELLRILEDCLLPKDSTTEGQVFYWKMAGDYYRYLAEFASGEDRKAKASNAQQKYEEATKSGQS-LPATNPIRLGLALNYSVFYYEILNQPSEACTLAKSAFDDAISELDRLPEEEYKDATLIMQLIRDNLTLWTSDTPDD 725
            + SRE+ VY AKLAE+AERYD+MV+S++ +AML + LTVEERNLLSV YKNVVGARRASWR+L+SIE KE  +   + A  +  YR KVE EL  IC +++R++++ L+P  S+ E  VFY+KM GDYYRYLAEF +G DRK  A ++ + Y+ AT + ++ LP T+PIRLGLALN+SVFYYEILN P  AC LAK AFD+AISELD L EE YKD+TLIMQL+RDNLTLWTSD P+D
Sbjct:    1 MASRENFVYIAKLAEQAERYDEMVDSMKKVAMLDIDLTVEERNLLSVGYKNVVGARRASWRILTSIEQKEESRGNDQNAKRIKEYRHKVETELTDICTDIMRVIDEHLIPSSSSGESTVFYYKMKGDYYRYLAEFKTGNDRKEVADHSMKAYQAATTTAEAELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAISELDNLNEESYKDSTLIMQLLRDNLTLWTSDIPED 238
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BLAST of mRNA_S-firma_F_contig10853.1142.1 vs. uniprot
Match: A0A0A0K1U0_CUCSA (14_3_3 domain-containing protein n=28 Tax=rosids TaxID=71275 RepID=A0A0A0K1U0_CUCSA)

HSP 1 Score: 289 bits (739), Expect = 7.540e-95
Identity = 150/235 (63.83%), Postives = 183/235 (77.87%), Query Frame = 3 
Query:   24 RESLVYGAKLAEEAERYDDMVESVRNLAMLGVQLTVEERNLLSVAYKNVVGARRASWRVLSSIESKERDKSETERASEVAAYRAKVEAELEKICEELLRILEDCLLPKDSTTEGQVFYWKMAGDYYRYLAEFASGEDRKAKASNAQQKYEEATKSGQS-LPATNPIRLGLALNYSVFYYEILNQPSEACTLAKSAFDDAISELDRLPEEEYKDATLIMQLIRDNLTLWTSDTPDD 725
            R++ VY AKLAE+AERYD+MV++++N+A L V+LTVEERNLLSV YKNVVGARRASWR+LSSIE KE  K     A  +  YR KVE+EL  IC +++ ++++ L+P  S  E  VFY+KM GDYYRYLAEF SG ++K  A  + + YE AT S +S LP T+PIRLGLALN+SVFYYEILN P  AC LAK AFD+AISELD L EE YKD+TLIMQL+RDNLTLWTSD P+D
Sbjct:    7 RDNFVYIAKLAEQAERYDEMVDAMKNVAKLDVELTVEERNLLSVGYKNVVGARRASWRILSSIEQKEEAKGNETNAKRIKEYRQKVESELSGICNDIMMVIDEHLIPSASAGESTVFYYKMKGDYYRYLAEFKSGNEKKDAADQSMKAYEAATSSAESELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAISELDTLNEESYKDSTLIMQLLRDNLTLWTSDIPED 241
[Close]
BLAST of mRNA_S-firma_F_contig10853.1142.1 vs. uniprot
Match: 1433D_SOYBN (14-3-3-like protein D n=38 Tax=cellular organisms TaxID=131567 RepID=1433D_SOYBN)

HSP 1 Score: 288 bits (738), Expect = 1.070e-94
Identity = 149/235 (63.40%), Postives = 183/235 (77.87%), Query Frame = 3 
Query:   24 RESLVYGAKLAEEAERYDDMVESVRNLAMLGVQLTVEERNLLSVAYKNVVGARRASWRVLSSIESKERDKSETERASEVAAYRAKVEAELEKICEELLRILEDCLLPKDSTTEGQVFYWKMAGDYYRYLAEFASGEDRKAKASNAQQKYEEATKSGQS-LPATNPIRLGLALNYSVFYYEILNQPSEACTLAKSAFDDAISELDRLPEEEYKDATLIMQLIRDNLTLWTSDTPDD 725
            RE+ VY AKLAE+AERY++MVES++N+A L V+LTVEERNLLSV YKNV+GARRASWR+LSSIE KE  K     A  +  YR KVE EL  IC +++R++++ L+P  +  E  VFY+KM GDYYRYLAEF SG ++K  A  + + YE AT + ++ LP T+PIRLGLALN+SVFYYEILN P  AC LAK AFD+AISELD L EE YKD+TLIMQL+RDNLTLWTSD P+D
Sbjct:    7 RENFVYIAKLAEQAERYEEMVESMKNVANLDVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEETKGNELNAKRIKEYRQKVELELSNICNDVMRVIDEHLIPSAAAGESTVFYYKMKGDYYRYLAEFKSGNEKKEAADQSMKAYESATAAAEADLPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAISELDTLNEESYKDSTLIMQLLRDNLTLWTSDIPED 241
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10853.1142.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7R9ZA87_9STRA5.250e-12481.90Hypothetical protein n=1 Tax=Pseudictyota dubia Ta... [more]
A0A397G8L3_9GLOM4.430e-9862.0014_3_3 domain-containing protein n=16 Tax=Eukaryot... [more]
A0A7S1G9W5_9STRA5.600e-9767.50Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
A0A6J1HX76_CUCMA9.270e-9664.6814-3-3-like protein D isoform X1 n=5 Tax=Cucurbita... [more]
A0A5A8CP36_CAFRO3.510e-9563.8814_3_3 domain-containing protein n=2 Tax=Cafeteria... [more]
A0A388KJ72_CHABU5.690e-9560.1614_3_3 domain-containing protein n=2 Tax=Chara bra... [more]
A0A6A5BN25_NAEFO6.510e-9559.3614_3_3 domain-containing protein n=3 Tax=Naegleria... [more]
A0A834LLX7_RHOSS6.600e-9562.6114_3_3 domain-containing protein n=1 Tax=Rhododend... [more]
A0A0A0K1U0_CUCSA7.540e-9563.8314_3_3 domain-containing protein n=28 Tax=rosids T... [more]
1433D_SOYBN1.070e-9463.4014-3-3-like protein D n=38 Tax=cellular organisms ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_F_contig10853contigS-firma_F_contig10853:300..2542 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef902022-09-19
OGS1.0 of Sphaerotrichia firma ET2_F female2021-02-24
Properties
Property NameValue
Seed ortholog5762.XP_002675917.1
PFAMs14-3-3
Max annot lvl2759|Eukaryota
KEGG koko:K06630
KEGG Pathwayko04011,ko04110,ko04114,ko04151,ko04390,ko04391,ko04722,ko05169,ko05203,map04011,map04110,map04114,map04151,map04390,map04391,map04722,map05169,map05203
GOsGO:0000166,GO:0000226,GO:0000910,GO:0001101,GO:0003674,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005739,GO:0005813,GO:0005815,GO:0005829,GO:0005856,GO:0005886,GO:0005911,GO:0005938,GO:0006996,GO:0007010,GO:0007017,GO:0007049,GO:0007154,GO:0007165,GO:0008092,GO:0008104,GO:0008144,GO:0008150,GO:0009506,GO:0009719,GO:0009725,GO:0009737,GO:0009741,GO:0009742,GO:0009755,GO:0009987,GO:0010033,GO:0010324,GO:0010564,GO:0014070,GO:0015630,GO:0016020,GO:0016043,GO:0017022,GO:0017076,GO:0019899,GO:0022402,GO:0023052,GO:0030054,GO:0030554,GO:0030865,GO:0031410,GO:0031982,GO:0032036,GO:0032038,GO:0032465,GO:0032467,GO:0032506,GO:0032553,GO:0032555,GO:0032559,GO:0032870,GO:0033036,GO:0033993,GO:0035639,GO:0036090,GO:0036094,GO:0042221,GO:0042470,GO:0043167,GO:0043168,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043401,GO:0044422,GO:0044424,GO:0044430,GO:0044444,GO:0044446,GO:0044464,GO:0045159,GO:0045787,GO:0048518,GO:0048522,GO:0048545,GO:0048770,GO:0050789,GO:0050794,GO:0050896,GO:0051117,GO:0051179,GO:0051301,GO:0051302,GO:0051716,GO:0051726,GO:0051781,GO:0055044,GO:0061024,GO:0061640,GO:0065007,GO:0070887,GO:0071310,GO:0071367,GO:0071383,GO:0071396,GO:0071407,GO:0071495,GO:0071840,GO:0071944,GO:0090068,GO:0097159,GO:0097305,GO:0097367,GO:0097708,GO:0099024,GO:0099568,GO:1901265,GO:1901363,GO:1901700,GO:1901701
Evalue2.71e-96
EggNOG OGsCOG5040@1|root,KOG0841@2759|Eukaryota
Descriptionprotein domain specific binding
COG categoryT
BRITEko00000,ko00001,ko03400,ko04147
Hectar predicted targeting categoryother localisation
Exons3
Model size841
Cds size759
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_F_contig10853.1142.1prot_S-firma_F_contig10853.1142.1Sphaerotrichia firma ET2_F femalepolypeptideS-firma_F_contig10853 317..2477 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815628.953695-UTR-S-firma_F_contig10853:299..3161622815628.953695-UTR-S-firma_F_contig10853:299..316Sphaerotrichia firma ET2_F femaleUTRS-firma_F_contig10853 300..316 +
1696949464.6875205-UTR-S-firma_F_contig10853:299..3161696949464.6875205-UTR-S-firma_F_contig10853:299..316Sphaerotrichia firma ET2_F femaleUTRS-firma_F_contig10853 300..316 +
1622815629.0136237-UTR-S-firma_F_contig10853:2477..25421622815629.0136237-UTR-S-firma_F_contig10853:2477..2542Sphaerotrichia firma ET2_F femaleUTRS-firma_F_contig10853 2478..2542 +
1696949464.7417269-UTR-S-firma_F_contig10853:2477..25421696949464.7417269-UTR-S-firma_F_contig10853:2477..2542Sphaerotrichia firma ET2_F femaleUTRS-firma_F_contig10853 2478..2542 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815628.968868-CDS-S-firma_F_contig10853:316..3411622815628.968868-CDS-S-firma_F_contig10853:316..341Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10853 317..341 +
1696949464.700777-CDS-S-firma_F_contig10853:316..3411696949464.700777-CDS-S-firma_F_contig10853:316..341Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10853 317..341 +
1622815628.9823494-CDS-S-firma_F_contig10853:1270..13921622815628.9823494-CDS-S-firma_F_contig10853:1270..1392Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10853 1271..1392 +
1696949464.7117438-CDS-S-firma_F_contig10853:1270..13921696949464.7117438-CDS-S-firma_F_contig10853:1270..1392Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10853 1271..1392 +
1622815628.9967444-CDS-S-firma_F_contig10853:1865..24771622815628.9967444-CDS-S-firma_F_contig10853:1865..2477Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10853 1866..2477 +
1696949464.7277882-CDS-S-firma_F_contig10853:1865..24771696949464.7277882-CDS-S-firma_F_contig10853:1865..2477Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10853 1866..2477 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-firma_F_contig10853.1142.1

>prot_S-firma_F_contig10853.1142.1 ID=prot_S-firma_F_contig10853.1142.1|Name=mRNA_S-firma_F_contig10853.1142.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=253bp
MSRESLVYGAKLAEEAERYDDMVESVRNLAMLGVQLTVEERNLLSVAYKN
VVGARRASWRVLSSIESKERDKSETERASEVAAYRAKVEAELEKICEELL
RILEDCLLPKDSTTEGQVFYWKMAGDYYRYLAEFASGEDRKAKASNAQQK
YEEATKSGQSLPATNPIRLGLALNYSVFYYEILNQPSEACTLAKSAFDDA
ISELDRLPEEEYKDATLIMQLIRDNLTLWTSDTPDDSNKPADDGTNVEDL
DG*
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mRNA from alignment at S-firma_F_contig10853:300..2542+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-firma_F_contig10853.1142.1 ID=mRNA_S-firma_F_contig10853.1142.1|Name=mRNA_S-firma_F_contig10853.1142.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=2243bp|location=Sequence derived from alignment at S-firma_F_contig10853:300..2542+ (Sphaerotrichia firma ET2_F female)
AACCACCCTACCCAATCATGAGCCGCGAGTCCCTGGTTTACGGTACGTAC
ACACACACACACGGAACGAAAACACACACTCAAGAAACAGCCACACAAGG
TGTTGTGGCGTGCGTGGGTTGTTGTGTATGAGGTTTGGAGAGGGTGTGCC
CAGGGGGGTCCTGAATGGCCTCACGCACGGGTGGGGCTGTCAGGGACGTA
CAGGGGGCGCTACACAGCCCACAAGCCGCCCCGTGGCAGTTGGGTGGCCT
TCCGGGGGGCCCACGCGGGCTACGGCCTCCATTCCTTCACGGTTAGAACC
GCAGGGGTGCACCAGGGCCCCACACAAGCCCATGGCCCCGATGGAGCCCC
AGGGGCGACGGTGGGCACCTGTCACCGTGTTTGTGGAAGGCCTGCGTGTG
TGGCTTGTTTTTGTGGGAGGGTGGTCCTGGGTGCCCTTGCATGCCCCCAC
CGCTTTGGTTTCGAAAAATGGGCCCTCCTGCGCCCTCCAGCCCCCTTTTT
CCACTTTCCACACCTTGCCTGCTTCTTTGCCCAGCCGTGCACGCCCCCCT
GGACCCCCTTTGGCTTACCTTTTTTGGCTGTTGGGTTATGATGCCTGTTT
CTATGCCTCCACCGACTCACATGCCCCATGCCCCCTTTCCCACTCTGTGG
CGGTTTGCTGTTGTTTTTGCTCCCCTGTGCCTCCTGGGGGCCCATCGCAG
TCACAACTTTGTGTACGGCACTGTGGAATACCCTTCCACACACCATAATA
ACCACAGGCCCATGCGCCCCCTTTTACCCCCCGTCCTTCGTTCGAACCCC
GCCCACTAGCCCCTCTGTGCCGTGTGTGTGGAGGGCTCTGTCGCCCGCCA
CTCTTCCCCACACACAAGCACACACTCTGGCCTTGCCCCTGGGCCAGTTT
CCATGCCCATACGCCCCCTCCTTGAGTTTTGCTCTGCCACTGTGGCTGCT
AATATGGGTGTCCTTTTCCAGGTGCCAAGCTGGCTGAGGAAGCCGAGCGC
TATGACGACATGGTGGAGAGCGTGCGCAACCTGGCCATGCTGGGCGTGCA
GCTGACCGTGGAGGAGCGCAACCTGCTGTCCGTTGCGTACAAGGTGTGTG
TGTGTGGCGGTGTGTTGTTGTATGCATCGTGTGAATCTTGTGTGTGTGTG
TGTATTCGAGAGGTGTGTTTGTGTGTGAGTTTTGCGCACGAAGTGTGTGT
GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGCCGCGT
GTGTATGGTGTGACTCTTGTGTGTATTTTCGTGTTTGAGAGTTGAGTTTG
TTTTAGGGTTTTGCGTACAAGGTGTGTGTCCGTGTGTGTGTGGCAGTGTG
CTGTTGCATGCAACGTGTGAATCGTGTGCATGTGTTTTTGTCGTGTATGT
TTCTCTACGCGTGGTTGTTATTCAGTGTGCGTTTGTGGCGTGGTCGTGCA
TGGTTGTCTACGTTTGGCTGTGTTTGCTTGTGTACATGGTTGTGGTTGTT
GTTGTGTATTCATGTGTGTGGTTCTCTTCATGTGCGTGTGTATACATCGT
TTACCCTTTCCCCCAGAACGTCGTCGGCGCCCGCCGCGCGTCGTGGAGGG
TGTTGTCCTCCATCGAGAGCAAGGAGCGCGACAAGTCCGAGACGGAGCGC
GCGTCCGAGGTGGCGGCGTACAGGGCCAAGGTGGAGGCGGAGCTGGAGAA
GATCTGCGAGGAGCTGCTCCGCATCCTGGAGGACTGCCTGCTGCCCAAGG
ACTCCACCACGGAGGGCCAGGTGTTTTACTGGAAGATGGCCGGCGACTAC
TACCGGTACCTGGCCGAGTTCGCGTCCGGTGAGGACCGCAAGGCCAAGGC
GTCCAACGCCCAGCAGAAGTACGAGGAGGCGACCAAGAGCGGCCAGTCTC
TGCCCGCCACCAACCCCATCCGCCTGGGCCTTGCCCTCAACTACTCCGTG
TTCTACTACGAGATCCTGAACCAGCCATCTGAGGCGTGCACGCTCGCCAA
GTCCGCCTTTGATGACGCCATCTCCGAGCTGGACCGCCTGCCGGAGGAGG
AGTACAAGGACGCCACACTCATCATGCAGCTCATCCGTGACAACCTCACA
TTGTGGACGTCGGACACCCCCGACGACTCCAACAAGCCAGCGGATGATGG
CACAAACGTGGAGGACCTGGACGGGTAAACCACCCACCCACACCCCCCCC
CCATTTTTCTGCATGACACCCCCTTTACACACACAAATGCCAC
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Coding sequence (CDS) from alignment at S-firma_F_contig10853:300..2542+

>mRNA_S-firma_F_contig10853.1142.1 ID=mRNA_S-firma_F_contig10853.1142.1|Name=mRNA_S-firma_F_contig10853.1142.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=1518bp|location=Sequence derived from alignment at S-firma_F_contig10853:300..2542+ (Sphaerotrichia firma ET2_F female)
ATGAGCCGCGAGTCCCTGGTTTACGATGAGCCGCGAGTCCCTGGTTTACG
GTGCCAAGCTGGCTGAGGAAGCCGAGCGCTATGACGACATGGTGGAGAGC
GTGCGCAACCTGGCCATGCTGGGCGTGCAGCTGACCGTGGAGGAGCGCAA
CCTGCTGTCCGTTGCGTACAAGGTGCCAAGCTGGCTGAGGAAGCCGAGCG
CTATGACGACATGGTGGAGAGCGTGCGCAACCTGGCCATGCTGGGCGTGC
AGCTGACCGTGGAGGAGCGCAACCTGCTGTCCGTTGCGTACAAGAACGTC
GTCGGCGCCCGCCGCGCGTCGTGGAGGGTGTTGTCCTCCATCGAGAGCAA
GGAGCGCGACAAGTCCGAGACGGAGCGCGCGTCCGAGGTGGCGGCGTACA
GGGCCAAGGTGGAGGCGGAGCTGGAGAAGATCTGCGAGGAGCTGCTCCGC
ATCCTGGAGGACTGCCTGCTGCCCAAGGACTCCACCACGGAGGGCCAGGT
GTTTTACTGGAAGATGGCCGGCGACTACTACCGGTACCTGGCCGAGTTCG
CGTCCGGTGAGGACCGCAAGGCCAAGGCGTCCAACGCCCAGCAGAAGTAC
GAGGAGGCGACCAAGAGCGGCCAGTCTCTGCCCGCCACCAACCCCATCCG
CCTGGGCCTTGCCCTCAACTACTCCGTGTTCTACTACGAGATCCTGAACC
AGCCATCTGAGGCGTGCACGCTCGCCAAGTCCGCCTTTGATGACGCCATC
TCCGAGCTGGACCGCCTGCCGGAGGAGGAGTACAAGGACGCCACACTCAT
CATGCAGCTCATCCGTGACAACCTCACATTGTGGACGTCGGACACCCCCG
ACGACTCCAACAAGCCAGCGGATGATGGCACAAACGTGGAGGACCTGGAC
GGGTAAAACGTCGTCGGCGCCCGCCGCGCGTCGTGGAGGGTGTTGTCCTC
CATCGAGAGCAAGGAGCGCGACAAGTCCGAGACGGAGCGCGCGTCCGAGG
TGGCGGCGTACAGGGCCAAGGTGGAGGCGGAGCTGGAGAAGATCTGCGAG
GAGCTGCTCCGCATCCTGGAGGACTGCCTGCTGCCCAAGGACTCCACCAC
GGAGGGCCAGGTGTTTTACTGGAAGATGGCCGGCGACTACTACCGGTACC
TGGCCGAGTTCGCGTCCGGTGAGGACCGCAAGGCCAAGGCGTCCAACGCC
CAGCAGAAGTACGAGGAGGCGACCAAGAGCGGCCAGTCTCTGCCCGCCAC
CAACCCCATCCGCCTGGGCCTTGCCCTCAACTACTCCGTGTTCTACTACG
AGATCCTGAACCAGCCATCTGAGGCGTGCACGCTCGCCAAGTCCGCCTTT
GATGACGCCATCTCCGAGCTGGACCGCCTGCCGGAGGAGGAGTACAAGGA
CGCCACACTCATCATGCAGCTCATCCGTGACAACCTCACATTGTGGACGT
CGGACACCCCCGACGACTCCAACAAGCCAGCGGATGATGGCACAAACGTG
GAGGACCTGGACGGGTAA
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