mRNA_S-firma_F_contig10851.1141.1 (mRNA) Sphaerotrichia firma ET2_F female
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Overview
Homology
BLAST of mRNA_S-firma_F_contig10851.1141.1 vs. uniprot
Match: D7FZR6_ECTSI (Ankyrin Repeat Transient Receptor Potential Channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZR6_ECTSI) HSP 1 Score: 652 bits (1683), Expect = 1.190e-215 Identity = 359/522 (68.77%), Postives = 397/522 (76.05%), Query Frame = 1
Query: 1 AALSYFVLFHSTTGNVPGDDGIVDHRFSSAECACALVFITAGIYREGREINRGIGGYFKDQWNFLDALGILCLFVGLVIRWNDWTSPWGPAFYALSAPLVVSRVLFFAQILQFQGPMIQVIFRMAATLLQFGAVMLVVMIGFTMALHVLFRDLEDFGGTLLSLFKAMLGDTDIFDNFSGGRYDGVATILMVVYLFIVTIMLLNLLIAILSTSHAQVQENTGGAFKVSKARIIAHYRMVVDENVLPAPFNLVQLLLSLGVYVFASPYYFYLETKKERRANERRVEDEHGLVFWGNICESVRQRQQRSCQYFGLVVFWLVLGPVAIAGGTILWGLSGLSYAHYVEYS----TDQVGRRYGPRRRLRVNDRRV----------------SPCVRLLQ---IVLKRFRALVITVPVFFFILLWCILGAPCCLFLRWLTPPVVEVVSWCRQLATCCPRKNSDEGRESSKRARTPTIESMLKKAPGGVGADKLREFLEDPMNDKDVRQDEKDRKTTVEHIKRLRDRLE 1497
AALSYFVLFHSTTG+ PG DGI DHRFS +E ACAL+FITAG YREGRE+ RGI YFKDQWN LDALG+L LFVGLVIRW+DWTS WGPAFYALSAPLVV+RVLFFAQILQFQGPM+QVIFRM ATLLQFGAVMLVVMIGFTMALHV+FRD+EDFG TLL LFKAMLG+T FD FSGGRYD VATIL+VVYLFIVT+MLLNLLIAILST HAQVQENTGGAFKVSKARIIAHYR VVD +VLPAPFNLVQLLLSLGV PY F LE K+E+ ER DEHG +FWGN+ E RQR + + + FG +V+WLVLGPVA+AGG ILWGLSG YA Y +S TD+ +G L +D SP R+LQ IV + + V +F L CILGAPCCLFLRWL P E SWC +LA C ++ DE ES KR TPTIESMLKK GVGA+KL EFLEDPMNDKDVRQDEK++KTTVEHIK LRDRLE
Sbjct: 748 AALSYFVLFHSTTGSDPGLDGIADHRFSLSEGACALIFITAGAYREGREMKRGIRAYFKDQWNVLDALGMLFLFVGLVIRWDDWTSTWGPAFYALSAPLVVARVLFFAQILQFQGPMVQVIFRMTATLLQFGAVMLVVMIGFTMALHVIFRDVEDFGDTLLGLFKAMLGETGFFDEFSGGRYDPVATILVVVYLFIVTVMLLNLLIAILSTEHAQVQENTGGAFKVSKARIIAHYRTVVDNDVLPAPFNLVQLLLSLGVIAMTFPYCFLLEAKREQSETERPAIDEHGRLFWGNVWEGARQRHRGARRAFGQLVWWLVLGPVAVAGGAILWGLSGFFYAQYAWHSWLSTTDEQDCFFGF---LLESDEEPDAEDMSKEVVMFGSCGSPLWRMLQGLGIVFRFLLEWIGVVLAWFLTFLLCILGAPCCLFLRWLVLPGTEFFSWCWKLAACRSTQDPDEDEESPKRLSTPTIESMLKKGRSGVGAEKLLEFLEDPMNDKDVRQDEKEKKTTVEHIKLLRDRLE 1266
BLAST of mRNA_S-firma_F_contig10851.1141.1 vs. uniprot
Match: A0A6H5KBU4_9PHAE (Ion_trans domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBU4_9PHAE) HSP 1 Score: 613 bits (1581), Expect = 2.100e-198 Identity = 345/519 (66.47%), Postives = 384/519 (73.99%), Query Frame = 1
Query: 1 AALSYFVLFHSTTGNVPGDDGIVDHRFSSAECACALVFITAGIYREGREINRGIGGYFKDQWNFLDALGILCLFVGLVIRWNDWTSPWGPAFYALSAPLVVSRVLFFAQILQFQGPMIQVIFRMAATLLQFGAVMLVVMIGFTMALHVLFRDLEDFGGTLLSLFKAMLGDTDIFDNFSGGRYDGVATILMVVYLFIVTIMLLNLLIAILSTSHAQVQENTGGAFKVSKARIIAHYRMVVDENVLPAPFNLVQLLLSLGVYVFASPYYFYLETKKERRANERRVEDEHGLVFWGNICESVRQRQQRSCQYFGLVVFWLVLGPVAIAGGTILWGLSGLSYAHYVEYS----TDQVGRRYG--------PRRRLRVNDRRV-----SPCVRLLQIVLKRFRALVITVPV---FFFILLWCILGAPCCLFLRWLTPPVVEVVSWCRQLATCCPRKNSDEGRESSKRARTPTIESMLKKAPGGVGADKLREFLEDPMNDKDVRQDEKDRKTTVEHIKRLRDRLE 1497
A LS FVLFHSTT + G DGIV HR S +E ACAL+FITAG YREGRE+ RGI YFKDQWN LDALGIL LFVGLVIRW+DWTS WGPAFYALSAPLVV+RVLFFAQILQF GPM+QVIFRM ATLLQFGAVMLVVMIGFTMALHV FRD+ DFG TLL LFKAMLG+T IFD FSGGRYD VATIL+VVYL IVT+MLLNLLIAILST HAQV ENT AFKVSKARIIAHYR VVD +VLPAPFNLVQL+LSLGV V PYYF LE K+E ER DE G +FWGN+ E R R + + + FG V+WLVLG VA+AGG +LW LSGL YA Y +S TD+ +G P D V SP R+LQ V FR+++ + V +F I L CILGAPCCL LRWL P E SWC +LA C ++ E ++S R+ TPTIESMLKK G GA+ L EFLEDPMNDKDVRQDEK+RKTTVEHIK LRDRLE
Sbjct: 765 AVLSSFVLFHSTTESDSGLDGIVAHRLSLSEGACALIFITAGAYREGREMKRGIRAYFKDQWNVLDALGILFLFVGLVIRWDDWTSTWGPAFYALSAPLVVARVLFFAQILQFHGPMVQVIFRMTATLLQFGAVMLVVMIGFTMALHVFFRDVADFGDTLLGLFKAMLGETGIFDEFSGGRYDPVATILVVVYLCIVTVMLLNLLIAILSTEHAQVMENTAEAFKVSKARIIAHYRTVVDNDVLPAPFNLVQLILSLGVIVLTLPYYFLLEAKREHSETERPATDEDGRLFWGNVWEGARHRHRSARRAFGQFVWWLVLGSVAVAGGAMLWSLSGLFYAQYACHSWLSTTDEQNSFFGFLQEGDEEPDEEDTAKDVVVFGSCGSPLWRMLQGVRIVFRSVLQWIGVVLAWFLIFLLCILGAPCCLVLRWLILPGTEFFSWCWKLAACRSTQDPGEDKKSPMRSSTPTIESMLKKGCCGAGAENLLEFLEDPMNDKDVRQDEKERKTTVEHIKLLRDRLE 1283
BLAST of mRNA_S-firma_F_contig10851.1141.1 vs. uniprot
Match: A0A6H5JUV2_9PHAE (Ion_trans domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUV2_9PHAE) HSP 1 Score: 357 bits (917), Expect = 2.430e-111 Identity = 244/536 (45.52%), Postives = 309/536 (57.65%), Query Frame = 1
Query: 4 ALSYFVLFHSTTGN--VPG--DDGIVDHRFSSAECACALVFITAGIYREGREINRGIGGYFKDQWNFLDALGILCLFVGLVIRWNDWTSPWGPAFYALSAPLVVSRVLFFAQILQFQGPMIQ----------------VIFRMAATLLQFGAVMLVVMIGFTMALHVLFRDLEDFGGTLLSLFKAMLGDTDIFDNFSGGRYDGVATILMVVYLFIVTIMLLNLLIAILSTSHAQVQENTGGAFKVSKARIIAHYRMVVDENVLPAPFNLVQLLLSLGVYVFASPYYFYLETKKERRANERRVEDEHGLVFWGN-ICESVRQRQQRSCQYFGL-------VVFWLVLGPVAIAGGTILWGLSGLSYAHYVEYSTDQVGRRYGPRRRLRVNDRRVSPCVRLLQIVLKRFRALVITVPVFFFILLWCILGAPCCLFLRWLTPPVVEVVSWCRQLATCCPRKNSDEGRESSKRARTPTIESMLKKAPGGVGADKLREFLEDPMNDKDVRQDEKDRKTTVEHIKRLRDRLERTNEMRLKEL 1527
ALS FVLFHS V G D+ +V E CA +FI G+++EGRE+ R G Y +DQWN LD L +L L VGLV R DW S GPAFYAL+APL+VSR LFF QI QGP+IQ V+FRM LL+FG VM V+++GF MA HV FRD + FG + L LFKAMLGD D F FSG YD VAT L+VV LFIVT+MLLNLL+AILSTSHAQV EN FKVS AR++ HY++VV ++LP PFNL+QL++ P + L HG + + + +Q + RS + + VVFW+VLGPVA+ GG++LW S L ++ R++ + R N S L + R+ ++ P WC+ GAP L L WL R L+ C ++ +S A TIESML K+PGGVGA KLREFL+DPM+DKDVRQDEKDR+TTVEHIK LR+RLE T++ +LK L
Sbjct: 16 ALSTFVLFHSQAEKSYVEGSTDEQVVFRTLDWPEATCAKIFIVGGVFQEGREMARNFGRYCEDQWNALDLLSLLFLTVGLVGRVVDWKSQLGPAFYALAAPLLVSRALFFVQIHPLQGPIIQASGEFRQVAKRNVSHSVVFRMTRILLKFGFVMAVILLGFIMAFHVQFRDFDSFGESFLDLFKAMLGDNDFFKVFSGDTYDFVATFLLVVGLFIVTVMLLNLLVAILSTSHAQVAENIDREFKVSIARMMDHYQLVVTNDMLPTPFNLLQLVVW--------PIAWCL----------------HGCCGRNSGVSGNTQQTRNRSKEAYACGSKAIEPVVFWVVLGPVAVNGGSLLWMESVLPAMYF--------WRKHHRLQNKRENGGGDSKKSMHLWSLFLRYNVII---PC------WCVFGAPVYLLLLWLNASG-------RVLSRCPCNDDASSTAKSRHGASKSTIESMLLKSPGGVGAQKLREFLDDPMDDKDVRQDEKDRRTTVEHIKLLRNRLENTSKEQLKGL 503
BLAST of mRNA_S-firma_F_contig10851.1141.1 vs. uniprot
Match: A0A6H5KJG3_9PHAE (Ion_trans domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KJG3_9PHAE) HSP 1 Score: 374 bits (960), Expect = 1.170e-110 Identity = 248/526 (47.15%), Postives = 314/526 (59.70%), Query Frame = 1
Query: 4 ALSYFVLFHSTTGN--VPG--DDGIVDHRFSSAECACALVFITAGIYREGREINRGIGGYFKDQWNFLDALGILCLFVGLVIRWNDWTSPWGPAFYALSAPLVVSRVLFFAQILQFQGPMIQ-----------VIFRMAATLLQFGAVMLVVMIGFTMALHVLFRDLEDFGGTLLSLFKAMLGDTDIFDNFSGGRYDGVATILMVVYLFIVTIMLLNLLIAILSTSHAQVQENTGGAFKVSKARIIAHYRMVVDENVLPAPFNLVQLLLSLGVYVFASPYYFYLETKKERRANERRVEDEHGLVFWGNICESVRQRQQRSC--QYFGLVVFWLVLGPVAIAGGTILWGLSGLSYAHYVEYSTDQVGRRYGPRRRLRVNDRRVSPCVRLLQIVLKRFRALVITVPVFFFILLWCILGAPCCLFLRWLTPPVVEVVSWCRQLATCCPRKNSDEGRESSKR-ARTPTIESMLKKAPGGVGADKLREFLEDPMNDKDVRQDEKDRKTTVEHIKRLRDRLERTNEMRLKEL 1527
ALS FVLFHS V G D+ +V E CA +FI G+++EGRE+ R G Y +DQWN LD L +L L +GLV R DW S GPAFYAL+APL+VSR LFF QI QGPMIQ V+FRM LL+FG VM V+++GFTMA HVLFRD + FG + L LFKAMLGDTD F FSG YD VAT L+VVYLFIVT+MLLNLL+AILSTSHAQV EN FKVS AR++ HY++VV ++LP PFNL+QL+ V+ A + N ++ + R ++ +C + G VVFW+VLGPVA+ GG++LW S L ++ R++ + R N S L + R+ V+ +P WC+ GAP L L WL R++ + CP + S+ A TIESML K+PGGVGA KLREFL+DPM+DKDVRQDEKDR+TTVEHIK LR+RLE T++ +LK L
Sbjct: 747 ALSTFVLFHSQAEKSYVEGSTDEQVVFRTLDWPEATCAKIFIVGGVFQEGREMARNFGRYCEDQWNALDLLSLLFLTIGLVGRVVDWKSQLGPAFYALAAPLLVSRALFFVQIHPLQGPMIQASGETKRFPQRVVFRMTRILLKFGFVMAVIVLGFTMAFHVLFRDFDSFGESFLDLFKAMLGDTDFFKVFSGDTYDVVATFLLVVYLFIVTVMLLNLLVAILSTSHAQVAENIEREFKVSIARMMDHYQLVVTNDMLPTPFNLLQLI----VWPIAWCLHGCCGRNSGVSGNTQQTRN--------------RSKEAYACGSKAIGPVVFWVVLGPVAVIGGSLLWMGSVLPAMYF--------WRKHHRLQNKRDNGGGDSKRSMHLWSLFLRY---VVIIPC------WCVFGAPVYLLLLWLNAS--------RRVLSRCPCNDDTRSTAKSRHGASKSTIESMLLKSPGGVGAQKLREFLDDPMDDKDVRQDEKDRRTTVEHIKLLRNRLENTSKEQLKGL 1229
BLAST of mRNA_S-firma_F_contig10851.1141.1 vs. uniprot
Match: A0A6H5JG42_9PHAE (Ion_trans domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG42_9PHAE) HSP 1 Score: 363 bits (932), Expect = 3.230e-108 Identity = 245/515 (47.57%), Postives = 303/515 (58.83%), Query Frame = 1
Query: 4 ALSYFVLFHSTT--GNVPG--DDGIVDHRFSSAECACALVFITAGIYREGREINRGIGGYFKDQWNFLDALGILCLFVGLVIRWNDWTSPWGPAFYALSAPLVVSRVLFFAQILQFQGPMIQVIFRMAATLLQFGAVMLVVMIGFTMALHVLFRDLEDFGGTLLSLFKAMLGDTDIFDNFSGGRYDGVATILMVVYLFIVTIMLLNLLIAILSTSHAQVQENTGGAFKVSKARIIAHYRMVVDENVLPAPFNLVQLLLSLGVYVFASPYYFYLETKKERRANERRVEDEHGLVFWGNICESVRQRQQRSCQYFGLVVFWLVLGPVAIAGGTILWGLSG-LSYAHYVEYSTDQVGRRYGPRRRLRVNDRRVSPCVRLLQIVLKRFRALVITVPVFFFILLWCILGAPCCLFLRWLTPPVVEVVSWCRQLATCCPRKNSDEGRESSKRARTPTIESMLKKAPGGVGADKLREFLEDPMNDKDVRQDEKDRKTTVEHIKRLRDRLERTNEMRLKELGN 1533
ALS FVLF S V G D+ IV + + +E CA I G+YRE E+ R G Y +DQWN LD LG+L +G + R DWT GPAFYALSAPL+VSR LFF QI QGPM VIFRM LL+FG VM VVMIGFTMA HVLFRD + FG + L LFKAM G+T F+ FSG YD VAT+L+VVYL IVTI+LLNLL+AILSTSH++VQ+N FK S AR++ HY++VV ++LPAPFNL+QL++ + + + R E G R+ +R + G VVFW+VLGPVA+ GGT+LW +S LS Y R+ R DR KR + + FF I LWCILGAP LF+ WL R+L C S ES TIES+L + PGGVGA KLREFL+DPM+DKDVRQDE+D++TTVEH+K LR+RLE T + L+ L N
Sbjct: 568 ALSTFVLFRSQAEQSRVDGSADEEIVFRKLNWSEATCATAVIAGGMYREWFEMARNYGRYLEDQWNALDLLGLLFFTIGFIARVVDWTQQLGPAFYALSAPLLVSRALFFVQIHPLQGPM--VIFRMTTVLLKFGFVMAVVMIGFTMAFHVLFRDFDSFGESFLELFKAMFGETTFFNAFSGDTYDAVATMLLVVYLSIVTILLLNLLVAILSTSHSKVQKNIDREFKASIARMMDHYQLVVTNDILPAPFNLLQLVVWPIAWCVGGCC-----GRSTSGSQSTRQELNRG-----------REAYERGNKAIGPVVFWVVLGPVAVVGGTLLWIVSTPLSV--------------YLWRKHHREGDR-------------KRLSLISLGCRYFFIIPLWCILGAPVYLFVLWLGAS--------RRLLCRCNYDVSIAHAESGH--FRCTIESILLEGPGGVGAKKLREFLDDPMDDKDVRQDERDKRTTVEHVKLLRNRLENTIQDELRGLEN 1027
BLAST of mRNA_S-firma_F_contig10851.1141.1 vs. uniprot
Match: D7FLB1_ECTSI (Ankyrin Repeat Transient Receptor Potential Channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLB1_ECTSI) HSP 1 Score: 316 bits (809), Expect = 2.710e-89 Identity = 216/504 (42.86%), Postives = 284/504 (56.35%), Query Frame = 1
Query: 10 SYFVLFHSTTGNVPGDDGIVDHRFSSAECACALVFITAGIYREGREINRGIGGYFKDQWNFLDALGILCLFVGLVIRWNDWTSPWGPAFYALSAPLVVSRVLFFAQILQFQGPMIQVIFRMAATLLQFGAVMLVVMIGFTMALHVLFRDLEDFGGTLLSLFKAMLGDTDIFDNFSGGRYDGVATILMVVYLFIVTIMLLNLLIAILSTSHAQVQENTGGAFKVSKARIIAHYRMVVDENVLPAPFNLVQLLLSLGVYVFASPYYFYLETKKERRANERRVEDEHGLVFWGNICESVRQRQQRSCQYFGLVVFWLVLGPVAIAGGTILWGLSGLSYAHYVEYSTDQVGRRYGPRRRLRVNDRRVSPCVRLLQIVLKRFRALVITVPVFFFILLWCILGAPCCLFLRWLTPPV--VEVVSWC----RQLATCCPRKNSDEGRESSKRARTPTIESMLKKAPGGVGADKLREFLEDPMNDKDVRQDEKDRKTTVEHIKRLRDRLERT 1503
S VLFH PG+ A +I AGI EG+E+ R G Y D WN LD LG+ + GL++R D + WG A YALSAPL+ SR+LFFAQ+L+F GPMIQV+F M A L++FG V++VVM+GF M+ H LF D++ FGGT L+LFKAMLG+ D F +F G +YD VAT L V+YL ++ +MLLNLLIA+LSTSH++V+ FKVSKARII HYRMVVD +LP PFNLVQL+LSL V V ++R G S R ++ G + FWL LGPVA A GT+LW LS L +A +V + T + R L V S VR L VFF WC+LGAP L WLT P+ +++ WC R+ A N ++ +L+ GG+ A L+ +LEDP+ D +VR DE+ ++TTVE+IK+LR+RLE+T
Sbjct: 826 STVVLFHEDGPLTPGE-------------AAFAFYILAGIITEGQEMRRDFGLYAADHWNILDLLGLGLVTGGLIVRCADGDNSWGRALYALSAPLIFSRLLFFAQMLRFHGPMIQVVFSMTAELVKFGVVIIVVMLGFAMSFHALFGDVDTFGGTCLTLFKAMLGEVDFFGSFPGNQYDSVATALFVIYLVVIAVMLLNLLIAVLSTSHSKVEGKADQEFKVSKARIIEHYRMVVDMCLLPPPFNLVQLILSLPVMV------------RDRS---------------GQGTASTRAQEA-----VGRMAFWLALGPVAAACGTVLWVLSSL-FAPFV-WHTHFYSKAQARRGALSVG----SLLVRYL--------------IVFF----WCVLGAPLYLMAFWLTAPMKWLKLRPWCWVWDRRQAPYIASWNPK------------SVNDLLEGNSGGLVAGDLQMYLEDPIGDPEVRPDERRKQTTVENIKQLRNRLEKT 1248
BLAST of mRNA_S-firma_F_contig10851.1141.1 vs. uniprot
Match: D7G6K7_ECTSI (Transient Receptor Potential Channel. C terminally truncated n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6K7_ECTSI) HSP 1 Score: 265 bits (677), Expect = 2.030e-75 Identity = 135/199 (67.84%), Postives = 156/199 (78.39%), Query Frame = 1
Query: 1 AALSYFVLFHSTTGNVPGDDGIVDHRFSSAECACALVFITAGIYREGREINRGIGGYFKDQWNFLDALGILCLFVGLVIRWNDWTSPWGPAFYALSAPLVVSRVLFFAQILQFQGPMIQVIFRMAATLLQFGAVMLVVMIGFTMALHVLFRDLEDFGGTLLSLFKAMLGDTDIFDNFSGGRYDGVATILMVVYLFIVTI 597
AAL Y V FHS TG V GDDGI + F+ E + A +FI+AG+YREG E++ GI YFKDQWN LDAL +LCL VGLVIR DWTSPWGPAFYALSAPL+V VLFFAQ+L FQGPMI+VI RM TLL+FG VM+VVM GF MA HVLFRD + FG T L LF+AMLG+ D F+ F+GGRYD VATIL VVYLF+VT+
Sbjct: 411 AALGYLVFFHSPTGGVLGDDGISNVEFTWGEGSFAAIFISAGVYREGLEMSMGIDKYFKDQWNVLDALALLCLSVGLVIRGVDWTSPWGPAFYALSAPLLVCSVLFFAQVLPFQGPMIKVISRMTTTLLKFGFVMVVVMTGFAMAFHVLFRDFDSFGMTFLGLFRAMLGEVDFFETFAGGRYDSVATILFVVYLFVVTV 609
BLAST of mRNA_S-firma_F_contig10851.1141.1 vs. uniprot
Match: A0A6H5LDE6_9PHAE (Ion_trans domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LDE6_9PHAE) HSP 1 Score: 233 bits (594), Expect = 1.240e-60 Identity = 174/506 (34.39%), Postives = 255/506 (50.40%), Query Frame = 1
Query: 109 VFITAGIYREGREINRGIGGYFKDQWNFLDALGILCLFVGLVIR-WNDWTSPWGPAFYALSAPLVVSRVLFFAQILQFQGPMIQVIFRMAATLLQFGAVMLVVMIGFTMALHVLFRDLEDFGGTLLSLFKAMLGDTDIFDNFSGGRYDGVATILMVVYLFIVTIMLLNLLIAILSTSHAQVQENTGGAFKVSKARIIAHYRMVVDENVLPAPFNLVQLLLSLGVYVFASPYYF----YLETKKERRANERRVEDEHGLVFWGNICESVR--QRQQRSCQYF-------GLVVFWLVLGPVAIAGGTILWGLSGLSYAHYVEYSTDQVGRRYGPRRRLRVNDRRVSPCVRLLQIVLKRFRALVITVPVFFFILLWCILGAPCCLFLRWLTPPVVEVVSWCRQL---------------------------ATCCPRKNSDEGRESSKRARTPTIESMLKKAPGGVGADKLREFLEDPMNDKDVRQDEKDRKTTVEHIKRLRDRLERT 1503
++I GI E REI Y +DQWN LD + L G + R + A YALSAPL +R+LFFAQIL QGPMIQV+F M L +FG +ML+VM+GF + + L+++ +G ++F+A LG+TD D+FSG +DGVAT+L+VVYL ++TIM+LNLL+A+LST+HA+V N G +KV++AR+I HY VV+ + LP PFNL Q ++FA P+ + +++ A+ S+ ++ +R YF G + FW +LGP+A+ G +LW +S + A V + T D+ + + + +V+ F+ C +GAP + W+ V V R L A P EG E P + L++A G + +L+ FL+DPM+D DVR+DE+ R TTVEHIK LR+RLE T
Sbjct: 1163 MYIFGGILTEFREILEDPWEYMRDQWNLLDVTSLTLLLGGAIQRMYGQVDDESSRALYALSAPLAFARILFFAQILPSQGPMIQVMFSMTGLLAKFGMIMLLVMLGFVTSFYSLYKETTAYGEVWKAIFRATLGETDYLDDFSGTTFDGVATVLLVVYLVLLTIMMLNLLVAVLSTAHAKVDANAGLEYKVTRARLIQHYVNVVEIDRLPPPFNLFQ-------WIFALPFMVLDLCFRTSRRPSTASTNSAXXXXXXXXXXXXXXSINGNEKTKRDRSYFKVARGFFGRLAFWAMLGPIAVLAGWVLWMIS-IVKAPVVVWQTS--------------GDKSLGGRIARMLLVI--------------FV---CAVGAPFWHLVMWVRGGVAGVRRTMRALGCXXXXXXXXXXXXKRGDGRTTTASITARGSPATIVAEGAEDDMEKVVPIV---LQEADGALTTSELQIFLDDPMSDPDVRRDEETRATTVEHIKLLRNRLEAT 1626
BLAST of mRNA_S-firma_F_contig10851.1141.1 vs. uniprot
Match: A0A6H5JMG8_9PHAE (Ion_trans domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMG8_9PHAE) HSP 1 Score: 188 bits (477), Expect = 6.270e-46 Identity = 121/307 (39.41%), Postives = 172/307 (56.03%), Query Frame = 1
Query: 88 AECACALVFITAGIYREGREINRGIGGYFKDQWNFLDALGILCLFVGLVIRWNDWTSPWGPAFYALSAPLVVSRVLFFAQILQFQGPMIQVIFRMAATLLQFGAVMLVVMIGFTMALHVLFRDL--EDFGGTLLSLFKAMLGDTDIFDNFSGGRYDGVATILMVVYLFIVTIMLLNLLIAILSTSHAQVQENTGGAFKVSKARIIAHYRMVVDENVLPAPFNLVQLLLSLGVYVFASPYYFYLETKKERRANERRVEDEHGLVFWGNICESVRQRQQRSCQYFGLVVFWLVLGPVAIAGGTILWGLS 1002
AE A A+ ++ A I E E+ + + GY D+W L ++ + R D S WG YA+ +PL+ R+L++AQ++ QG IQV++ MA+ L QF VM VV++GF M+ LFRD+ E G LL F+AMLG+ +FD+F G ++D AT+L+V YL ++TIMLLNLLIA+LST+H +V+E +VS+AR+ HYR VV + LPAPFNL QL++ L + L+F N R+ G +VFWLVLGP AI GG +W +S
Sbjct: 692 AEMAFAI-YVVAAIMLEATEMWKDLAGYLLDRWKAPHFLALVVALAAFLARAIDSDSSWGRGLYAVGSPLMYWRLLYYAQVIPSQGSTIQVLYSMASELGQFFVVMGVVILGFAMSFFALFRDVKGETLRGALLDAFQAMLGEVGLFDDFVGEKHDLAATVLLVSYLLVMTIMLLNLLIAVLSTAHGKVEEAV--LIRVSRARVYTHYRWVVATDALPAPFNLAQLVVLLPCQMV-------------------------DLLFKSNTYPIARRG-------VGRIVFWLVLGPGAILGGIFVWLVS 963
BLAST of mRNA_S-firma_F_contig10851.1141.1 vs. uniprot
Match: D7FR83_ECTSI (Transient Receptor Potential Channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR83_ECTSI) HSP 1 Score: 187 bits (475), Expect = 9.490e-46 Identity = 120/311 (38.59%), Postives = 175/311 (56.27%), Query Frame = 1
Query: 76 RFSSAECACALVFITAGIYREGREINRGIGGYFKDQWNFLDALGILCLFVGLVIRWNDWTSPWGPAFYALSAPLVVSRVLFFAQILQFQGPMIQVIFRMAATLLQFGAVMLVVMIGFTMALHVLFRDL--EDFGGTLLSLFKAMLGDTDIFDNFSGGRYDGVATILMVVYLFIVTIMLLNLLIAILSTSHAQVQENTGGAFKVSKARIIAHYRMVVDENVLPAPFNLVQLLLSLGVYVFASPYYFYLETKKERRANERRVEDEHGLVFWGNICESVRQRQQRSCQYFGLVVFWLVLGPVAIAGGTILWGLS 1002
+ + AE A A+ ++ A I E E+ + + GY D+W L ++ + R D S WG YA+ +PL+ R+L++AQ++ QG IQV++ MA+ L QF VM VV++GF M+ LFRD+ E G LL F+AMLG+ +FD+F G ++D AT+L+V YL ++TIMLLNLLIA+LST+H +V+E +VS+AR+ HYR VV + LPAPFNL QL++ L + ++F GN R+ G +VFWL+LGP AI GG +W +S
Sbjct: 597 QLTIAEVAFAI-YVVAAIMLEATEMWKDLAGYLLDRWKAPHFLALVVALAAFLARAIDPDSSWGRGLYAVGSPLMYWRLLYYAQVIPSQGSTIQVLYGMASELGQFFVVMGVVILGFAMSFFALFRDVKGETIRGALLDAFQAMLGEVGLFDDFVGEKHDLAATVLLVSYLVVMTIMLLNLLIAVLSTAHGKVEEAV--LIRVSRARVYTHYRWVVATDALPAPFNLAQLVVLLPCKMV-------------------------DVLFKGNTYPIARRG-------VGRIVFWLLLGPGAILGGVFVWLVS 872 The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10851.1141.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-firma_F_contig10851.1141.1 >prot_S-firma_F_contig10851.1141.1 ID=prot_S-firma_F_contig10851.1141.1|Name=mRNA_S-firma_F_contig10851.1141.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=447bp MIQVIFRMAATLLQFGAVMLVVMIGFTMALHVLFRDLEDFGGTLLSLFKAback to top mRNA from alignment at S-firma_F_contig10851:1..2854+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-firma_F_contig10851.1141.1 ID=mRNA_S-firma_F_contig10851.1141.1|Name=mRNA_S-firma_F_contig10851.1141.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=2854bp|location=Sequence derived from alignment at S-firma_F_contig10851:1..2854+ (Sphaerotrichia firma ET2_F female)back to top Coding sequence (CDS) from alignment at S-firma_F_contig10851:1..2854+ >mRNA_S-firma_F_contig10851.1141.1 ID=mRNA_S-firma_F_contig10851.1141.1|Name=mRNA_S-firma_F_contig10851.1141.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=2682bp|location=Sequence derived from alignment at S-firma_F_contig10851:1..2854+ (Sphaerotrichia firma ET2_F female)back to top |