mRNA_S-firma_F_contig10839.1125.1 (mRNA) Sphaerotrichia firma ET2_F female
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Overview
Homology
BLAST of mRNA_S-firma_F_contig10839.1125.1 vs. uniprot
Match: A0A6P4XGZ5_BRABE (HSPB1-associated protein 1-like n=1 Tax=Branchiostoma belcheri TaxID=7741 RepID=A0A6P4XGZ5_BRABE) HSP 1 Score: 192 bits (489), Expect = 2.270e-56 Identity = 109/267 (40.82%), Postives = 152/267 (56.93%), Query Frame = 1
Query: 22 RVRLGRLQPPGS-VLKETLCEFVEAGLGDFLLWL--------QGDVDGASPLARYPPAEFFGYMAYAHLSSLLEGHPELPAAAACFSWERFGVGHGDGMESTVWIGGQGAHTACHYDTYAGVNLVAQLCGRKQWTLFPPVDTPLLRPCREPYEESTVWSSMS----KPEAVPGV---HCFVAVLEPGEVLVVPRHWWHKVECLSTSVSINQWVPSPLDVPARVEEAVTRHLACTLQLRRHEGSTHWLVPGERLGTSDEDVADMAAAV 774
R R G P VL ET CE+++A L F LWL + + ++PL Y P + Y+ Y +++ L P++ A WE FG G+EST+W+G GAHT CHYDTY G NLV Q+ GRK+W LFPP D+P L P R PYEES+V+S ++ E P V H +V VLEPG+VL VP+HWWH VE LSTS+++N W+ D R++EAV R + L ++ + WL P E + + ++ + AA+
Sbjct: 52 RFRTGPRNPASKDVLWETDCEYIDASLYQFCLWLDPVSPHPPEDNSTDSNPLQPYNPDNTWAYLDYKYMAELFSDQPDILEAVR---WEDFGFPGRSGVESTIWVGSVGAHTPCHYDTY-GCNLVLQVYGRKKWVLFPPEDSPSLYPTRLPYEESSVFSQVNVAHPNVEQHPKVVNSHPYVVVLEPGDVLFVPKHWWHYVESLSTSIAVNSWIEMTSDAEDRLQEAVVRLVL--LSIKSGSDQSQWLNPTENVTSRASNLGFVQAAL 312
BLAST of mRNA_S-firma_F_contig10839.1125.1 vs. uniprot
Match: A0A3Q2PLN2_FUNHE (HSPB1 associated protein 1 n=2 Tax=Fundulus heteroclitus TaxID=8078 RepID=A0A3Q2PLN2_FUNHE) HSP 1 Score: 188 bits (478), Expect = 1.880e-53 Identity = 107/250 (42.80%), Postives = 141/250 (56.40%), Query Frame = 1
Query: 4 LGDARGRVRLGRLQPPGSVLKETLCEFVEAGLGDFLLWLQGDVDGASPLARYPPAEFFGYMAYAHLSSLLEGHPELPAAAACFSWERFGVGHGDGMESTVWIGGQGAHTACHYDTYAGVNLVAQLCGRKQWTLFPPVDTPLLRPCREPYEESTVWSSM-------SKPEAVPGVHCFVAVLEPGEVLVVPRHWWHKVECLST-SVSINQWVPSPLDVPARVEEAVTRHLACTLQLRRHEGSTH-WLVPGE 726
LG R RLGR + + L ET C ++EA + FL W + D P A+YP E++ Y Y +++ L + P + W FG +G EST+WIG +GA+T CH DTY G NLV Q+ GRK+W LFPP DT L P R PYEES+V+S + SK G LEPG+VL VPRHWWH VE + +VS+N W+ +D ARV EAVT+ + C L+ + E +T WL P E
Sbjct: 49 LGGRLIRFRLGRKEATNAPLFETQCSYIEATVAQFLRWTRRQTD-VGPFAQYPYTEYWAYADYKYITVLFDDKPSMFEDV---KWSEFGFEGRNGEESTLWIGTEGANTPCHLDTY-GCNLVLQVQGRKRWHLFPPGDTAKLYPTRIPYEESSVFSQVDVLHPDRSKFPGFQGARAHAVTLEPGQVLYVPRHWWHYVESIDAITVSVNSWIELEVDDAARVSEAVTKTVVCALKSAQSEDNTDTWLNPTE 293
BLAST of mRNA_S-firma_F_contig10839.1125.1 vs. uniprot
Match: UPI00189F6A93 (HSPB1-associated protein 1 homolog isoform X1 n=3 Tax=Sebastes umbrosus TaxID=72105 RepID=UPI00189F6A93) HSP 1 Score: 188 bits (478), Expect = 2.230e-53 Identity = 108/251 (43.03%), Postives = 143/251 (56.97%), Query Frame = 1
Query: 1 RLGDARGRVRLGRLQPPGSVLKETLCEFVEAGLGDFLLWLQGDVD-GASPLARYPPAEFFGYMAYAHLSSLLEGHPELPAAAACFSWERFGVGHGDGMESTVWIGGQGAHTACHYDTYAGVNLVAQLCGRKQWTLFPPVDTPLLRPCREPYEESTVWSS-------MSKPEAVPGVHCFVAVLEPGEVLVVPRHWWHKVECLS-TSVSINQWVPSPLDVPARVEEAVTRHLACTLQLRRHEGSTHWLVPGE 726
RLGD R RLGR + + L ET C +VEA L FL W + P YP +E++ Y Y +++ L + P + W +FG DG EST+W+G +GA+T CH D+Y G NLV Q+ GRK+W LFPP DT L P R PYEES+V+S +S+ A PG V L+PG+VL VPR WWH VE L +VS+N W+ + D ARV EAVT+ + C L +R + + WL P E
Sbjct: 73 RLGDKLIRFRLGRKEETNTPLFETQCSYVEARLDQFLSWTRDQTGTDVGPFCDYPTSEYWAYADYKYIAVLFQDQPSMFQDV---KWSQFGFEGRDGRESTLWVGTEGANTPCHLDSY-GCNLVLQVQGRKRWHLFPPEDTANLYPTRIPYEESSVFSQVDVLRPDLSRFPAFPGARAHVVTLQPGQVLFVPRLWWHYVESLDHVTVSVNSWMEAEEDDVARVGEAVTKAVVCAL--KRDDDTDDWLNPTE 317
BLAST of mRNA_S-firma_F_contig10839.1125.1 vs. uniprot
Match: A0A096LPU6_POEFO (HSPB1 associated protein 1 n=1 Tax=Poecilia formosa TaxID=48698 RepID=A0A096LPU6_POEFO) HSP 1 Score: 187 bits (474), Expect = 2.750e-53 Identity = 106/245 (43.27%), Postives = 138/245 (56.33%), Query Frame = 1
Query: 22 RVRLGRLQPPGSVLKETLCEFVEAGLGDFLLWLQGDVDGASPLARYPPAEFFGYMAYAHLSSLLEGHPELPAAAACFSWERFGVGHGDGMESTVWIGGQGAHTACHYDTYAGVNLVAQLCGRKQWTLFPPVDTPLLRPCREPYEESTVWSSMS----KPEAVP---GVHCFVAVLEPGEVLVVPRHWWHKVECLST-SVSINQWVPSPLDVPARVEEAVTRHLACTLQ-LRRHEGSTHWLVPGER 729
R RLGR + + L ET C ++EA + FL W Q D S + YP +E++ Y Y ++++L P + W FG G EST+WIG QGA+T CH DTY G NLV Q+ GRK+W LFPP DT L P R PYEES+V+S + P P G LEPG+VL VPRHWWH VE + +VS+N W+ +D ARV EAVTR + C L+ + + + WL P ER
Sbjct: 55 RFRLGRKEATNAPLFETQCSYIEANVAQFLRWTQHQTDVGS-FSEYPCSEYWAYADYKYITTLFHDQPSMFEDV---KWSEFGFEGRTGKESTLWIGTQGANTPCHLDTY-GCNLVLQVQGRKRWHLFPPEDTAKLYPTRIPYEESSVFSQVHVLRPDPRKFPQFQGARAHTVTLEPGQVLYVPRHWWHYVESIDPITVSVNSWIELEVDDAARVSEAVTRTVVCALKSVPSDDNADAWLNPTER 294
BLAST of mRNA_S-firma_F_contig10839.1125.1 vs. uniprot
Match: A0A6P7HKK5_9TELE (HSPB1-associated protein 1 isoform X1 n=2 Tax=Parambassis ranga TaxID=210632 RepID=A0A6P7HKK5_9TELE) HSP 1 Score: 188 bits (478), Expect = 3.380e-53 Identity = 112/268 (41.79%), Postives = 151/268 (56.34%), Query Frame = 1
Query: 4 LGDARGRVRLGRLQPPGSVLKETLCEFVEAGLGDFLLWLQGDVD-GASPLARYPPAEFFGYMAYAHLSSLLEGHPELPAAAACFSWERFGVGHGDGMESTVWIGGQGAHTACHYDTYAGVNLVAQLCGRKQWTLFPPVDTPLLRPCREPYEESTVWSSMS-------KPEAVPGVHCFVAVLEPGEVLVVPRHWWHKVECLST-SVSINQWVPSPLDVPARVEEAVTRHLACTLQLRRHEGST-HWLVPGERLGTS-DEDVADMAAAV 774
LGD R RLG+ Q + L ET C +VEA +G FL W QG D P + Y +EF+ Y Y +++ L E P + W FG +G EST+WIG +GA+T CH D+Y G NLV Q+ GRK+W LFPP DT L P R PYEES+V+S + + A V L+PG+VL VPRHWWH VE + +VS+N W+ D ARV EAVT+ + C ++ + + +T +WL P E S DE++ + AV
Sbjct: 60 LGDRHVRFRLGKKQETNTPLFETQCPYVEATVGQFLSWTQGQPDTDVGPFSEYSCSEFWAYADYKYIAVLFEDQPFMFEDVR---WSEFGFAERNGRESTLWIGTEGANTPCHLDSY-GCNLVLQVQGRKRWHLFPPEDTDNLYPTRIPYEESSVFSQVDVLHPDLRRCPAFASARPHVVTLQPGQVLYVPRHWWHYVESVDPITVSVNSWIELEEDEVARVSEAVTKTVVCAIKSSQSDDNTDNWLNPTETGEASHDENMQYLNLAV 323
BLAST of mRNA_S-firma_F_contig10839.1125.1 vs. uniprot
Match: H2M241_ORYLA (HSPB1 associated protein 1 n=3 Tax=Oryzias latipes TaxID=8090 RepID=H2M241_ORYLA) HSP 1 Score: 187 bits (475), Expect = 6.180e-53 Identity = 107/259 (41.31%), Postives = 144/259 (55.60%), Query Frame = 1
Query: 1 RLGDARGRVRLGRLQPPGSVLKETLCEFVEAGLGDFLLWLQGDVDGASPLARYPPAEFFGYMAYAHLSSLLEGHPELPAAAACFSWERFGVGHGDGMESTVWIGGQGAHTACHYDTYAGVNLVAQLCGRKQWTLFPPVDTPLLRPCREPYEESTVWS-------SMSKPEAVPGVHCFVAVLEPGEVLVVPRHWWHKVECLS-TSVSINQWVPSPLDVPARVEEAVTRHLACTLQLRRHEGSTH-WLVPGERLGTSDED 750
RLGD R RLGR Q + L ET C +V+A + FL W QG D P + YP +E++ Y Y +++ L E P + W FG +G +STVWIG +GA+T CH DTY G NLV Q+ GRK+W LFPP DT L P R PYEES+V+S + + A ++ L+PG+VL VPRHWWH VE + +VS+N W+ +D ARV EAVT+ + ++ E + WL P E S +
Sbjct: 44 RLGDRLVRFRLGRKQKTSAPLFETQCSYVQARIAHFLCWTQGQTD-VGPFSEYPYSEYWAYADYKYIAMLFEDQPSMFEDV---KWSDFGFEGRNGSDSTVWIGTKGANTPCHMDTY-GCNLVLQVQGRKRWHLFPPEDTTNLYPTRIPYEESSVFSLVHVQSPDLKRFPAFGAAQAYIVTLQPGQVLYVPRHWWHYVESVDPVTVSVNTWIELEVDDFARVSEAVTKMVVWAIKSAESEDNDDSWLNPTEEGSASHNE 297
BLAST of mRNA_S-firma_F_contig10839.1125.1 vs. uniprot
Match: UPI00146A2CD8 (HSPB1-associated protein 1 homolog n=2 Tax=Notothenioidei TaxID=8205 RepID=UPI00146A2CD8) HSP 1 Score: 187 bits (475), Expect = 7.150e-53 Identity = 112/262 (42.75%), Postives = 151/262 (57.63%), Query Frame = 1
Query: 22 RVRLGRLQPPGSVLKETLCEFVEAGLGDFLLWLQGDVDG-ASPLARYPPAEFFGYMAYAHLSSLLEGHPELPAAAACFSWERFGVGHGDGMESTVWIGGQGAHTACHYDTYAGVNLVAQLCGRKQWTLFPPVDTPLLRPCREPYEESTVWSSMS--KPEA--VPGVH---CFVAVLEPGEVLVVPRHWWHKVECLST-SVSINQWVPSPLDVP-ARVEEAVTRHLACTLQLRRHEGSTHWLVPGER-LGTSDEDVADMAAAV 774
R RLGR + + L ET C + EA L FLLW QG+ G P YP +E++ Y Y +++ L + + PA W +FG +G EST+WIG +GA+T CH D+Y G NLV Q+ GRK+W LFPP DTP L P R P+EES+V+S + P+ PG H + L+PG+VL VPRHWWH VE L +VS+N W+ D ARV EAVT+ + C +R E WL P E + + DE++ + AV
Sbjct: 53 RFRLGRKEETNTPLFETQCSYEEATLEHFLLWTQGEKQGDVGPFCEYPKSEYWAYADYKYIALLFQ---DQPAMFEDVKWSQFGFEGRNGRESTLWIGSEGANTPCHLDSY-GCNLVLQVQGRKRWHLFPPEDTPHLYPTRIPFEESSVFSQLDVLHPDLRRFPGFHGARAHIVTLQPGQVLYVPRHWWHYVESLDPITVSVNSWIEMEDDDDVARVGEAVTKAVVCAF--KRDENPEDWLNPTEEGVASHDENMQCVNLAV 308
BLAST of mRNA_S-firma_F_contig10839.1125.1 vs. uniprot
Match: A0A8C2Z5H0_CYCLU (Hspb associated protein 1 n=1 Tax=Cyclopterus lumpus TaxID=8103 RepID=A0A8C2Z5H0_CYCLU) HSP 1 Score: 186 bits (471), Expect = 1.180e-52 Identity = 110/259 (42.47%), Postives = 143/259 (55.21%), Query Frame = 1
Query: 1 RLGDARGRVRLGRLQPPGSVLKETLCEFVEAGLGDFLLWLQGDVDG-ASPLARYPPAEFFGYMAYAHLSSLLEGHPELPAAAACFSWERFGVGHGDGMESTVWIGGQGAHTACHYDTYAGVNLVAQLCGRKQWTLFPPVDTPLLRPCREPYEESTVWS-------SMSKPEAVPGVHCFVAVLEPGEVLVVPRHWWHKVECLST-SVSINQWVPSPLDVPARVEEAVTRHLACTLQLRRHEGSTHWLVPGERLGTSDED 750
RLGD R RLGR + + L ET C +VEA L DFL W +G A P +YP ++++ Y Y +++ L + P + W FG G EST+W+G GA+T CH D+Y G NLV Q+ GRK+W LFPP DT L P R PYEES+V+S + + A G V L+PG+VL VPRHWWH VE L +VSIN W+ +D ARV EAVT+ A L+ + WL P E S +D
Sbjct: 42 RLGDKVVRFRLGRKEETNTPLFETQCSYVEARLEDFLCWTRGQTGPHAGPFCKYPNSQYWAYADYKYIALLFQDQPSMFEDV---KWSDFGFEGRGGRESTLWVGTAGANTPCHLDSY-GCNLVLQVQGRKRWHLFPPEDTEKLYPTRIPYEESSVFSRVHVVHPDLKRFPAFNGARAHVVTLQPGQVLYVPRHWWHYVESLDPITVSINSWIELEMDDLARVGEAVTK--AVVFALKADADTDDWLNPTEAGVASHQD 294
BLAST of mRNA_S-firma_F_contig10839.1125.1 vs. uniprot
Match: UPI001FB62900 (HSPB1-associated protein 1 homolog isoform X1 n=2 Tax=Mugil cephalus TaxID=48193 RepID=UPI001FB62900) HSP 1 Score: 186 bits (472), Expect = 2.020e-52 Identity = 106/251 (42.23%), Postives = 144/251 (57.37%), Query Frame = 1
Query: 4 LGDARGRVRLGRLQPPGSVLKETLCEFVEAGLGDFLLWLQGDVD-GASPLARYPPAEFFGYMAYAHLSSLLEGHPELPAAAACFSWERFGVGHGDGMESTVWIGGQGAHTACHYDTYAGVNLVAQLCGRKQWTLFPPVDTPLLRPCREPYEESTVWSSMS--KPE-----AVPGVHCFVAVLEPGEVLVVPRHWWHKVECLST-SVSINQWVPSPLDVPARVEEAVTRHLACTLQLRRHEGST-HWLVPGE 726
LGD R RLGR + + L ET C +VEA + FL W +G P ++YP ++ + Y Y +++ L + P + W FG DG EST+WIG +GA+T CH DTY G NLV Q+ GRK+W LFPP DT L P R PYEES+V+S + P+ + G V +L+PG+VL VPRHWWH VE + +VS+N W+ D +RV EAVTR + C ++ R + +T WL P E
Sbjct: 57 LGDRLVRFRLGRKEEKNTPLFETQCSYVEATVAQFLSWTRGQSGTDIGPFSKYPCSDHWAYADYKYIAMLFQDQPFMFEDV---KWSEFGFEGRDGKESTLWIGTEGANTPCHQDTY-GCNLVLQIQGRKRWHLFPPEDTAHLYPTRIPYEESSVFSQVDVLHPDLRRFPSFHGARAHVVILQPGQVLYVPRHWWHYVESVDPITVSVNSWIELEADDVSRVSEAVTRAVVCAVKSSRSDDNTGDWLNPTE 303
BLAST of mRNA_S-firma_F_contig10839.1125.1 vs. uniprot
Match: A0A3Q3ENV9_9LABR (HSPB1 associated protein 1 n=1 Tax=Labrus bergylta TaxID=56723 RepID=A0A3Q3ENV9_9LABR) HSP 1 Score: 186 bits (473), Expect = 2.030e-52 Identity = 112/268 (41.79%), Postives = 149/268 (55.60%), Query Frame = 1
Query: 4 LGDARGRVRLGRLQPPGSVLKETLCEFVEAGLGDFLLWLQGDVD-GASPLARYPPAEFFGYMAYAHLSSLLEGHPELPAAAACFSWERFGVGHGDGMESTVWIGGQGAHTACHYDTYAGVNLVAQLCGRKQWTLFPPVDTPLLRPCREPYEESTVWSSMS----KPEAVP---GVHCFVAVLEPGEVLVVPRHWWHKVECLST-SVSINQWVPSPLDVPARVEEAVTRHLACTLQLR-RHEGSTHWLVPGER-LGTSDEDVADMAAAV 774
LGD R RLGR + L ET C +VEA L FL W + P YP + ++ Y Y +++ L E P + W FG DG EST+WIG QGA+T CH D+Y G NLV Q+ GRK+W LFPP DT L P R PYEES+V+S + P+ P G V L+PG+VL VPRHWWH VE + +VS+N W+ +D ARV EAVT+ + C L+ + + +WL P E +G+ DE++ + AV
Sbjct: 49 LGDKLVRFRLGRKDETKTPLFETQCSYVEAKLEHFLNWTRDHAGRDVGPFCEYPISAYWAYADYKYIAMLFEDQPSMFEDV---KWSEFGFEGRDGKESTLWIGTQGANTPCHLDSY-GCNLVLQVHGRKRWHLFPPEDTVHLYPTRIPYEESSVFSQVDVLHPDPQRFPAFQGARAHVVTLQPGQVLYVPRHWWHYVESVDPITVSVNSWIELEVDHIARVSEAVTKAVVCALKSAPSDDNADNWLNPTEEGVGSHDENMQYLNLAV 312 The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10839.1125.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-firma_F_contig10839.1125.1 >prot_S-firma_F_contig10839.1125.1 ID=prot_S-firma_F_contig10839.1125.1|Name=mRNA_S-firma_F_contig10839.1125.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=258bp RLGDARGRVRLGRLQPPGSVLKETLCEFVEAGLGDFLLWLQGDVDGASPLback to top mRNA from alignment at S-firma_F_contig10839:3584..4444- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-firma_F_contig10839.1125.1 ID=mRNA_S-firma_F_contig10839.1125.1|Name=mRNA_S-firma_F_contig10839.1125.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=861bp|location=Sequence derived from alignment at S-firma_F_contig10839:3584..4444- (Sphaerotrichia firma ET2_F female)back to top Coding sequence (CDS) from alignment at S-firma_F_contig10839:3584..4444- >mRNA_S-firma_F_contig10839.1125.1 ID=mRNA_S-firma_F_contig10839.1125.1|Name=mRNA_S-firma_F_contig10839.1125.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=1548bp|location=Sequence derived from alignment at S-firma_F_contig10839:3584..4444- (Sphaerotrichia firma ET2_F female)back to top |