mRNA_S-firma_F_contig10839.1124.1 (mRNA) Sphaerotrichia firma ET2_F female
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Overview
Homology
BLAST of mRNA_S-firma_F_contig10839.1124.1 vs. uniprot
Match: UPI00036B865C (T9SS type A sorting domain-containing protein n=1 Tax=Lewinella persica TaxID=70998 RepID=UPI00036B865C) HSP 1 Score: 72.8 bits (177), Expect = 3.070e-11 Identity = 34/77 (44.16%), Postives = 45/77 (58.44%), Query Frame = 1
Query: 1 DILHEFYSALGGANWTNDANWTTTDDYCTYFGVACDLTYDVVSIRLVNNNLQGPLPPVIAQLPALTNLVLSGNNITG 231
+ L Y+A G NWT++ NW T DYCT+FGV CD+ V + L NNNL G LP +A L + L + N+ TG
Sbjct: 251 NALEAIYNATNGDNWTDNTNWLTDCDYCTWFGVTCDVNGRVRRLELPNNNLIGTLPAELADLTEVEYLRFNNNSFTG 327
BLAST of mRNA_S-firma_F_contig10839.1124.1 vs. uniprot
Match: A0A0M9E098_9DELT (Putative leucine rich repeat protein (Fragment) n=1 Tax=Candidatus Magnetomorum sp. HK-1 TaxID=1509431 RepID=A0A0M9E098_9DELT) HSP 1 Score: 69.3 bits (168), Expect = 9.100e-11 Identity = 46/110 (41.82%), Postives = 58/110 (52.73%), Query Frame = 1
Query: 1 DILHEFYSALGGANWTNDANWTT-TDDYCTYFGVACDLTYDVVSIRLVNNNLQGPLPPVIAQLPALTNLVLSGNN-ITGQLS--FLPLMSGLLYLD---LTDNALSGDFP 309
DIL Y GG NW N NW + C++FGV CD T +V+ +RL +NNL G +P I +L L L L GN I+G LS +P LL L+ L LSG P
Sbjct: 46 DILTHIYDLTGGGNWKNYKNWLDDSQSECSWFGVTCDETKNVIMLRLGDNNLSGQIPNEILKLKNLKELDLGGNQQISGTLSDFIVPASEKLLKLERLFLCCMNLSGSIP 155
BLAST of mRNA_S-firma_F_contig10839.1124.1 vs. uniprot
Match: A0A2H3L7N3_9CHLR (Uncharacterized protein n=2 Tax=Candidatus Chloroploca TaxID=1579476 RepID=A0A2H3L7N3_9CHLR) HSP 1 Score: 70.9 bits (172), Expect = 1.230e-10 Identity = 37/76 (48.68%), Postives = 45/76 (59.21%), Query Frame = 1
Query: 7 LHEFYSALGGANWTNDANWTTTDDYCTYFGVACDLTYDVVS-IRLVNNNLQGPLPPVIAQLPALTNLVLSGNNITG 231
L FY A G NWTN+ NW TT + CT+ G+ C + VS I L NN L+G +PP +QL L L LS N ITG
Sbjct: 52 LVAFYQATDGPNWTNNTNWLTTTEACTWHGIWCVPGENYVSQISLSNNRLKGAIPPEFSQLSKLNYLFLSNNQITG 127
BLAST of mRNA_S-firma_F_contig10839.1124.1 vs. uniprot
Match: A0A2P6NUN3_9EUKA (RHS repeat-associated core domain-containing protein n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6NUN3_9EUKA) HSP 1 Score: 69.7 bits (169), Expect = 1.470e-10 Identity = 36/80 (45.00%), Postives = 49/80 (61.25%), Query Frame = 1
Query: 7 LHEFYSALGGANWTNDANWT--TTDDYCTYFGVACDLTYDVVSIRLVNNNLQGPLPPVIAQLPALTNLVLSGNNITGQLS 240
L FY A GG NWTN+A W T++ YC +FG+ C++T D + I L +NNL G + P L +T+L LS N + G LS
Sbjct: 26 LRSFYEATGGTNWTNNAGWNNGTSEVYCDWFGIECNVTSDKLRIDLSHNNLVGQISPNFTLLN-ITHLNLSNNTLYGSLS 104
BLAST of mRNA_S-firma_F_contig10839.1124.1 vs. uniprot
Match: A0A7C5MPA3_9BACT (Fibronectin type-III domain-containing protein n=1 Tax=Bacteroidetes bacterium TaxID=1898104 RepID=A0A7C5MPA3_9BACT) HSP 1 Score: 68.6 bits (166), Expect = 7.170e-10 Identity = 37/82 (45.12%), Postives = 49/82 (59.76%), Query Frame = 1
Query: 7 LHEFYSALGGANWTNDANWTTTDDYCTYFGVACDLTYDVVSIRLVNNNLQGPLPPVIAQLPALTNLVLSGNNITGQLSFLPL 252
L +FY A G NW + W T+ C+++GV+C L+ V + L N LQGPLP AQLP L L+LSGN +TG + PL
Sbjct: 57 LVDFYDATNGNNWQYNDGWKHTNTPCSWYGVSC-LSGHVSELHLELNGLQGPLPD-FAQLPFLQQLILSGNELTGNIPDFPL 136
BLAST of mRNA_S-firma_F_contig10839.1124.1 vs. uniprot
Match: A0A7Y1VSS3_9BACT (Uncharacterized protein (Fragment) n=1 Tax=Saprospiraceae bacterium TaxID=2202734 RepID=A0A7Y1VSS3_9BACT) HSP 1 Score: 68.2 bits (165), Expect = 1.090e-9 Identity = 38/115 (33.04%), Postives = 65/115 (56.52%), Query Frame = 1
Query: 7 LHEFYSALGGANWTNDANWTTTDDYCTYFGVACDLTYDVVSIRLVNNNLQGPLPPVIAQLPALTNLVLSGNNIT---GQLSFLPLMSGLLYLDLTDNALSGDFP-SLANLTAASE 339
L ++A G WTN +NW T D C ++GV C++ V ++ L NNL G +PP +A L L ++ S N ++ +++ LPL + L++++N SG+ P ++NL + E
Sbjct: 51 LMALFNATNGPAWTNRSNWGDTCDVCLWYGVNCNMNNRVQALSLPLNNLNGEIPPDLADLTFLESIDFSSNELSVLASEITSLPLKT----LNISNNLFSGNLPPEISNLASTLE 161
BLAST of mRNA_S-firma_F_contig10839.1124.1 vs. uniprot
Match: A0A1Z5J6P4_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5J6P4_FISSO) HSP 1 Score: 67.0 bits (162), Expect = 2.350e-9 Identity = 35/96 (36.46%), Postives = 55/96 (57.29%), Query Frame = 1
Query: 16 FYSALGGANWTNDANWTTTDDYCTYFGVACDLTYDVVSIRLVNNNLQGPLPPVIAQLPALTNLVLSGNNITGQL-SFLPLMSGLLYLDLTDNALSG 300
FY A GG+NWT + W ++YC+++GV CDL V + L NNL+G LP I+ L + + + N ++G + + + + L LDL DN +G
Sbjct: 110 FYYATGGSNWTKNDGWLRDENYCSWYGVTCDLEDKVFELTLDKNNLKGTLPQEISLLDTMESFGVYQNALSGTVPNGIVEWTELRLLDLEDNNFTG 205
BLAST of mRNA_S-firma_F_contig10839.1124.1 vs. uniprot
Match: A0A022QVH4_ERYGU (Protein kinase domain-containing protein n=2 Tax=Erythranthe guttata TaxID=4155 RepID=A0A022QVH4_ERYGU) HSP 1 Score: 63.2 bits (152), Expect = 5.470e-8 Identity = 56/181 (30.94%), Postives = 82/181 (45.30%), Query Frame = 1
Query: 61 WTTTDDYCTYFGVACDLTYD-VVSIRLVNNNLQGPLPPVIAQLPALTNLVLSGNNITGQLSFLPLMSGLLYLDLTDNALSGDFPSLANLTAASEXXXXXXXXXXPLPAALPKYLEALYVYXXXXXXXXXXGVSGSPRLRVLWAANNTLHGNMTD--NFQPALTHVDLSYNNLTGLFPASLT 594
W++ ++C + V CD T V +I L + + G LPP + QL L +L L N+ITG L ++ L + L DN+ + P L + P +P YL S S L +A+N+TL G + D NF P L ++ LSYN+LTG P SL+
Sbjct: 15 WSSATNFCNWTNVKCDPTNSFVTAIDLDSAAVSGTLPPELNQLTQLQSLNLQKNSITGTLPSFQNITTLQQILLDDNSFTS-IPDNFLLGLTNLQTFSISQNYKLSPWEIPNYL------------------SESTNLVNFFASNSTLKGTIPDFFNFFPNLQNLRLSYNDLTGSLPGSLS 176
BLAST of mRNA_S-firma_F_contig10839.1124.1 vs. uniprot
Match: UPI001CB98978 (receptor-like kinase TMK4 n=1 Tax=Erigeron canadensis TaxID=72917 RepID=UPI001CB98978) HSP 1 Score: 63.2 bits (152), Expect = 5.520e-8 Identity = 58/202 (28.71%), Postives = 84/202 (41.58%), Query Frame = 1
Query: 4 ILHEFYSALGGANWTNDANWTTTDDYCTYFGVACDLTYDVVSIRLVNNNLQGPLPPVIAQLPALTNLVLSGNNITGQLSFLPLMSGLLYLDLTDNALSGDFPSLANLTAASEXXXXXXXXXXPLPAALPKYLEALYVYXXXXXXXXXX-----GVSGSPRLRVLWAANNTLHGNMTDNFQ--PALTHVDLSYNNLTGLFPAS 588
++ F +AL NW + D+C++ G+ CD T V I L +L G LP + QL L NL L +N LSGD PSL+NLT E +P L +L + ++ S L+ A+N ++ G++ D F P+L ++ LSYNNLTG P S
Sbjct: 32 VMSTFLTALSPL----PTNWKPSTDFCSWDGIKCDNTKQVTDINLDKLSLSGSLPSNLNQLSQLKNL-----------------------HLQNNKLSGDLPSLSNLTFL-ESVLLDFNNFSSIPQGFFLGLTSLQEFSISDNSNLSPWTIPNDLTESTNLQKFSASNASIIGSIPDIFGKFPSLQNLRLSYNNLTGSLPPS 205
BLAST of mRNA_S-firma_F_contig10839.1124.1 vs. uniprot
Match: A0A3B7C0B4_9FLAO (Ig-like domain-containing protein n=2 Tax=Aquimarina sp. BL5 TaxID=1714860 RepID=A0A3B7C0B4_9FLAO) HSP 1 Score: 63.2 bits (152), Expect = 6.260e-8 Identity = 31/71 (43.66%), Postives = 43/71 (60.56%), Query Frame = 1
Query: 7 LHEFYSALGGANWTNDANWTTTDDYCTYFGVACDLTYDVVSIRLVNNNLQGPLPPVIAQLPALTNLVLSGN 219
L + Y++ G NWTN+ NW T C ++GV + V+S+ LVNNNL G L P I+ L LT L+L+ N
Sbjct: 2113 LIDLYNSTNGPNWTNNTNWLTDAPVCDWYGVTV-VEGKVISLSLVNNNLDGILTPSISNLNLLTELILNSN 2182 The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10839.1124.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-firma_F_contig10839.1124.1 >prot_S-firma_F_contig10839.1124.1 ID=prot_S-firma_F_contig10839.1124.1|Name=mRNA_S-firma_F_contig10839.1124.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=219bp DILHEFYSALGGANWTNDANWTTTDDYCTYFGVACDLTYDVVSIRLVNNNback to top mRNA from alignment at S-firma_F_contig10839:272..985+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-firma_F_contig10839.1124.1 ID=mRNA_S-firma_F_contig10839.1124.1|Name=mRNA_S-firma_F_contig10839.1124.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=714bp|location=Sequence derived from alignment at S-firma_F_contig10839:272..985+ (Sphaerotrichia firma ET2_F female)back to top Coding sequence (CDS) from alignment at S-firma_F_contig10839:272..985+ >mRNA_S-firma_F_contig10839.1124.1 ID=mRNA_S-firma_F_contig10839.1124.1|Name=mRNA_S-firma_F_contig10839.1124.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=1314bp|location=Sequence derived from alignment at S-firma_F_contig10839:272..985+ (Sphaerotrichia firma ET2_F female)back to top |