mRNA_S-firma_F_contig10835.1121.1 (mRNA) Sphaerotrichia firma ET2_F female
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Overview
Homology
BLAST of mRNA_S-firma_F_contig10835.1121.1 vs. uniprot
Match: A0A6H5JRT4_9PHAE (Peptidase A1 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JRT4_9PHAE) HSP 1 Score: 236 bits (603), Expect = 1.760e-70 Identity = 110/131 (83.97%), Postives = 121/131 (92.37%), Query Frame = 1
Query: 1 MAYTPSTKSSGWFTVKVDDMTLNGMSIAADPAVFQRGKGIIVDSGTTDTYLPKSVAKGFSIAWEAATGSPYETCKDNHFCMILSAAELEALPTLTVHLDGGVEVNVRPEGYMDALGKDNAYAPRIYLTESM 393
M YTPSTKSSGWFTVKV D+T+N +SIA D A+FQ+GKGIIVDSGTTDTYLPKSVAKGFS AWE ATGSPY CKDNHFCMIL++AELEALPT+T+H+DGG+EVNVRP GYMDALGKDNAYAPRIYLTESM
Sbjct: 313 MVYTPSTKSSGWFTVKVTDITVNQVSIAKDAAIFQKGKGIIVDSGTTDTYLPKSVAKGFSAAWERATGSPYANCKDNHFCMILTSAELEALPTITIHMDGGLEVNVRPSGYMDALGKDNAYAPRIYLTESM 443
BLAST of mRNA_S-firma_F_contig10835.1121.1 vs. uniprot
Match: A0A6H5LNK8_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5LNK8_9PHAE) HSP 1 Score: 184 bits (468), Expect = 2.710e-53 Identity = 91/132 (68.94%), Postives = 104/132 (78.79%), Query Frame = 1
Query: 1 MAYTPSTKSSGWFTVKVDDMTLNGMSIAADPAVFQRGKGIIVDSGTTDTYLPKSVAKGFSIAWEAATGSPYETCKDNHFCMILSAAELEALPTLTVHLDGGVEVNVRPEGYMDALGKD-NAYAPRIYLTESM 393
M YTPST + TVKV D+TLNG+SI D +VFQ+G GI V SGTTD YLP++VA+GFS AWEAATGSPY TCK N FCM + A+LE LP LT+H+DGGVEVNV+PE YMDA D NAYAPRIYLTESM
Sbjct: 295 MQYTPSTGETSAPTVKVTDVTLNGVSITTDASVFQKGTGIKVVSGTTDMYLPRAVAEGFSAAWEAATGSPYATCKSNEFCMTRTTADLETLPVLTIHMDGGVEVNVQPEAYMDASSDDENAYAPRIYLTESM 426
BLAST of mRNA_S-firma_F_contig10835.1121.1 vs. uniprot
Match: A0A835ZHP7_9STRA (Aspartic peptidase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZHP7_9STRA) HSP 1 Score: 127 bits (319), Expect = 5.820e-32 Identity = 68/131 (51.91%), Postives = 81/131 (61.83%), Query Frame = 1
Query: 1 MAYTPSTKSSGWFTVKVDDMTLNGMSIAADPAVFQRGKGIIVDSGTTDTYLPKSVAKGFSIAWEAATGSPYETCKDNHFCMILSAAELEALPTLTVHLDGGVEVNVRPEGYMD-ALGKDNA-YAPRIYLTE 387
M YTP+ GWFTV + D+ + G SI DPA + RGKG+IVDSGTTDTYLP + A GF W+A TG Y+ M LS A+ ALPT T GGV V+V+PE YMD A D A Y PR+YL E
Sbjct: 197 MQYTPNLHDEGWFTVDLQDILIGGESINVDPAQYNRGKGVIVDSGTTDTYLPSACADGFRAQWQALTGMAYDNKP-----MKLSKAQFAALPTFTFVFAGGVRVDVKPEAYMDVAADHDGAGYTPRMYLDE 322
BLAST of mRNA_S-firma_F_contig10835.1121.1 vs. uniprot
Match: A0A835ZJF3_9STRA (Aspartic peptidase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZJF3_9STRA) HSP 1 Score: 113 bits (283), Expect = 1.220e-26 Identity = 67/146 (45.89%), Postives = 81/146 (55.48%), Query Frame = 1
Query: 1 MAYTPSTKSSGWFTVKVDDMTLNGMSIAADPAVFQRGKGIIVDSGTTDTYLPKSVAKGFSIAWEAATGSPYETCKDNHFCMILSAAELEALPTLTVHLDGGVEVNVRPEGYMDA----------------LGKDNAYAPRIYLTES 390
M +TPS K +GWFTV + D+ + G SI A AV+ RGKG IVDSGTTDTYLP++ A F AW AATG Y L+ AEL ALP LT GG V+V PE YM A +GK +Y R+YL E+
Sbjct: 193 MQFTPSLKRTGWFTVDLIDVQIGGASIGAPAAVYARGKGAIVDSGTTDTYLPEACAARFRAAWRAATGRDYSESAPQR----LARAELAALPALTFVFRGGARVDVLPEAYMVARAALTLTRLAASAQEKVGK--SYVARVYLDEA 332
BLAST of mRNA_S-firma_F_contig10835.1121.1 vs. uniprot
Match: A0A7S3YC94_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YC94_HETAK) HSP 1 Score: 110 bits (275), Expect = 7.650e-26 Identity = 59/130 (45.38%), Postives = 76/130 (58.46%), Query Frame = 1
Query: 1 MAYTPSTKSSGWFTVKVDDMTLNGMSIAADPAVFQRGKGIIVDSGTTDTYLPKSVAKGFSIAWEAATGSPYETCKDNHFCMILSAAELEALPTLTVHLDGGVEVNVRPEGYMDALGKDNAYAPRIYLTES 390
M + P T+++GWFTV + ++ + G + + + GKG IVDSGTTDTYL + VA F W AA+G Y LS A+L ALP++T GVEV VRPE YM+ G N Y PRIYL ES
Sbjct: 249 MQFVPLTQNTGWFTVSLKEIRVGGEKLNVGASNYNGGKGTIVDSGTTDTYLNRHVANEFKAKWHAASGMTYSNAAKT-----LSEAQLAALPSVTYVFGNGVEVVVRPESYMEKTGT-NKYTPRIYLDES 372
BLAST of mRNA_S-firma_F_contig10835.1121.1 vs. uniprot
Match: A0A6H5LN99_9PHAE (Peptidase A1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LN99_9PHAE) HSP 1 Score: 111 bits (277), Expect = 8.060e-26 Identity = 66/135 (48.89%), Postives = 79/135 (58.52%), Query Frame = 1
Query: 7 YTPSTKSSGWFTVKVDDMTLNGMSI--AADPAVFQRGKGIIVDSGTTDTYLPKSVAKGFSIAWEAATGSPYETCKDNHFCMILSAAELEALPTLTVHLDGGVEVNVRPEGYMD---ALGKDNA--YAPRIYLTES 390
YT + + G+F V+V + L G SI A +F G G IVDSGTTD YLP VA FS AWEAATG PY C N FC+ L+ E LP ++ L GVEV V P Y++ GK + YAPRIYLTES
Sbjct: 353 YTTAQFARGFFAVEVLGVALGGRSIVTAETLELFSLGTGTIVDSGTTDMYLPVEVADAFSEAWEAATGEPYAMCPGNSFCLKLTPPEAAELPVVSFTLADGVEVRVSPLQYLEKKETAGKPHKTYYAPRIYLTES 487
BLAST of mRNA_S-firma_F_contig10835.1121.1 vs. uniprot
Match: A0A8J2SW55_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SW55_9STRA) HSP 1 Score: 108 bits (270), Expect = 2.760e-25 Identity = 60/132 (45.45%), Postives = 80/132 (60.61%), Query Frame = 1
Query: 1 MAYTPSTKSSGWFTVKVDDMTLNGMSIAADPAVFQRGKGIIVDSGTTDTYLPKSVAKGFSIAWEAATG-SP-YETCKDNHFCMILSAAELEALPTLTVHLDGGVEVNVRPEGYMDALGKDNAYAPRIYLTES 390
M + P K+SGWFTV++ D+ LNG SI + + GKG IVDSGTTDTYLP+ A+ F AW AA G SP Y K + +AA+ PT+T GGV+V+V + YM+ G + PR+YLTE+
Sbjct: 281 MQFVPLAKNSGWFTVQLKDVLLNGKSIGVPESTWNTGKGTIVDSGTTDTYLPRRAAEQFKRAWHAAMGPSPKYANSK-----LAYTAAQAAKFPTITYVFAGGVKVDVEGKAYMEKAGAGR-WVPRVYLTEA 406
BLAST of mRNA_S-firma_F_contig10835.1121.1 vs. uniprot
Match: A0A7S2WCI1_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WCI1_9STRA) HSP 1 Score: 108 bits (271), Expect = 3.770e-25 Identity = 58/133 (43.61%), Postives = 75/133 (56.39%), Query Frame = 1
Query: 1 MAYTPSTKSSGWFTVKVDDMTLNGMSIAADPAVFQRGKGIIVDSGTTDTYLPKSVAKGFSIAWEAATGSPYETCKDNHFCMILSAAELEALPTLTVHLDGG----VEVNVRPEGYMDALGKDNAYAPRIYLTE 387
M + P KSSGWFTVK+ + + +S++ + GKG+IVDSGTTDTYLPK A F AW + +G Y K M L A +PT+T G VEV++RP YM+ G D Y PR+YLTE
Sbjct: 271 MKFVPLAKSSGWFTVKLKGLRVGDVSLSVSGNSYNSGKGVIVDSGTTDTYLPKKAAGAFKKAWRSLSGREYGNGK-----MTLDAENFARIPTITFVFQGAHGEDVEVHMRPNAYMEQQGSDK-YVPRVYLTE 397
BLAST of mRNA_S-firma_F_contig10835.1121.1 vs. uniprot
Match: A0A4D9CR18_9STRA (Peptidase A1 domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CR18_9STRA) HSP 1 Score: 101 bits (252), Expect = 1.840e-22 Identity = 53/127 (41.73%), Postives = 74/127 (58.27%), Query Frame = 1
Query: 1 MAYTPSTKSSGWFTVKVDDMTLNGMSIAADPAVFQRGKGIIVDSGTTDTYLPKSVAKGFSIAWEAATGSPYETCKDNHFCMILSAAELEALPTLTVHLDGGVEVNVRPEGYMDALGKDNAYAPRIYL 381
+ + P TK +GW+TV + D+ + SI DP VF G+G IVDSGTTDTYLP+SVA F ++ G Y + M LS +E+EALP L LD GVEV + E Y++ + + A ++L
Sbjct: 293 LQWVPLTKPTGWYTVTLKDIKIGNTSIGVDPNVFNAGQGTIVDSGTTDTYLPRSVASAFQRVFQDVAGVAYSSRS-----MRLSPSEMEALPPLVFVLDNGVEVPMPRENYLECMENGASCAGSVFL 414
BLAST of mRNA_S-firma_F_contig10835.1121.1 vs. uniprot
Match: A0A7S2B1E9_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2B1E9_9STRA) HSP 1 Score: 96.3 bits (238), Expect = 8.560e-21 Identity = 51/133 (38.35%), Postives = 75/133 (56.39%), Query Frame = 1
Query: 1 MAYTPSTKSSGWFTVKVDDMTLNGMSIAADPAVFQRGKGIIVDSGTTDTYLPKSVAKGFSIAWEAATGSPYETCKDNHFCMILSAAELEALPTLTV---HLDGG-VEVNVRPEGYMDALGKDNAYAPRIYLTE 387
M P+TKSSGWFTV +D +++ G + +V+ GKG+IVDSGTTDTYLP+ +A F AW+ G Y K M S + LP ++ ++G +E+ + P+ YM+ K Y PR+Y+ E
Sbjct: 130 MVLVPTTKSSGWFTVHLDYVSVGGTKLDVQDSVYNSGKGVIVDSGTTDTYLPRKMAGQFKKAWKDIVGKEYGNTK-----MTFSDEQFAKLPVISFAFKDVNGKKIEIGMHPDAYMEKSAKQ--YVPRVYVNE 255 The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10835.1121.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-firma_F_contig10835.1121.1 >prot_S-firma_F_contig10835.1121.1 ID=prot_S-firma_F_contig10835.1121.1|Name=mRNA_S-firma_F_contig10835.1121.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=131bp MAYTPSTKSSGWFTVKVDDMTLNGMSIAADPAVFQRGKGIIVDSGTTDTYback to top mRNA from alignment at S-firma_F_contig10835:1422..3051- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-firma_F_contig10835.1121.1 ID=mRNA_S-firma_F_contig10835.1121.1|Name=mRNA_S-firma_F_contig10835.1121.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=1630bp|location=Sequence derived from alignment at S-firma_F_contig10835:1422..3051- (Sphaerotrichia firma ET2_F female)back to top Coding sequence (CDS) from alignment at S-firma_F_contig10835:1422..3051- >mRNA_S-firma_F_contig10835.1121.1 ID=mRNA_S-firma_F_contig10835.1121.1|Name=mRNA_S-firma_F_contig10835.1121.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=786bp|location=Sequence derived from alignment at S-firma_F_contig10835:1422..3051- (Sphaerotrichia firma ET2_F female)back to top |