mRNA_S-firma_F_contig10831.1117.1 (mRNA) Sphaerotrichia firma ET2_F female
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Overview
Homology
BLAST of mRNA_S-firma_F_contig10831.1117.1 vs. uniprot
Match: A0A7S1C7L7_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C7L7_9STRA) HSP 1 Score: 104 bits (259), Expect = 9.980e-25 Identity = 68/150 (45.33%), Postives = 96/150 (64.00%), Query Frame = 1
Query: 1 MEAELRKMPPAQRRRHVDMVSQYKADLGTLRKDLDRAMDSVQREALLAS-NRSAMERKADD---RAATATERVKRSTARLQDASRTVAETEEIGVNVIGGLQEQRETLLRAHDKVTDVNTLTGRARSIIKAIQRRAITNKLVLGLIIFLL 438
ME E R + P+++RR + Y+A+L R DL+RA R+AL+A +R A+ R++ R AT R+ RSTA L++ RTV ETEE+GV ++G L QRETLLRAHDKV + N LT RAR ++ I+RRA N+ +L ++I L
Sbjct: 63 MELEARSVAPSEKRRLTGRIRTYRAELSAARTDLERAQTRGDRDALMAGGSRDAVSRESASQRGRIEEATARMDRSTAVLEETRRTVMETEEVGVGIMGNLHSQRETLLRAHDKVKETNRLTTRARRVLNNIKRRACYNQALLWVVILFL 212
BLAST of mRNA_S-firma_F_contig10831.1117.1 vs. uniprot
Match: K3WZD4_GLOUD (V-SNARE domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WZD4_GLOUD) HSP 1 Score: 81.3 bits (199), Expect = 6.280e-16 Identity = 58/148 (39.19%), Postives = 90/148 (60.81%), Query Frame = 1
Query: 1 MEAELRKMPPAQRRRHVDMVSQYKADLGTLRKDLDRAMDSVQREALLASNRSAMERKADDRAATATERVKRSTARLQDASRTVAETEEIGVNVIGGLQEQRETLLRAHDKVTDVNTLTGRARSIIKAIQRRAITNKLVLGLIIFLLVI 444
M E+R PP R+ ++ Y+ +L L++DL+RA + RE S + +R T R+ RS+ RL+ + R VAETEEIG++V+ L +QRE+LL AH+KV + +TG AR I++ + RR +TN++VL +I LL+I
Sbjct: 60 MSIEVRGKPPMLRKAMQAKINLYRDELQGLQRDLERAQ-LMARETKANPRASYNQNAQYERITGNTNRLLRSSQRLESSQRIVAETEEIGISVLDTLAQQRESLLSAHEKVRETREVTGDARRILQRMTRRILTNRIVLYTVIALLLI 206
BLAST of mRNA_S-firma_F_contig10831.1117.1 vs. uniprot
Match: A0A7S3FIA0_9VIRI (Hypothetical protein n=1 Tax=Prasinoderma singulare TaxID=676789 RepID=A0A7S3FIA0_9VIRI) HSP 1 Score: 78.6 bits (192), Expect = 5.550e-15 Identity = 54/152 (35.53%), Postives = 92/152 (60.53%), Query Frame = 1
Query: 1 MEAELRKMPPAQRRRHVDMVSQYKADLGTLRKD-----LDRAMDSVQREALLASNRSAMERKADDRAATATERVKRSTARLQDASRTVAETEEIGVNVIGGLQEQRETLLRAHDKVTDVNTLTGRARSIIKAIQRRAITNKLVLGLIIFLLV 441
M+ E R PP + R + + YKADL L+KD + RA D+ + E LL + SA +++ +R T T+R++RS+ R+++ RT+ ETEE+GV+++ L +QR+T+ A D + + R R +I ++ RR + NK+++ II LL+
Sbjct: 55 MDLEARTQPPEAKGRLLARLRDYKADLNGLKKDAKRLAMPRAGDASRAE-LLGDSASAADQR--NRLLTTTDRLQRSSDRIEEGKRTILETEELGVSILQDLHQQRQTITHARDTLHSTDDNLSRGRRLISSMARRMVQNKIIMYAIILLLI 203
BLAST of mRNA_S-firma_F_contig10831.1117.1 vs. uniprot
Match: A0A835APB3_9POAL (V-SNARE domain-containing protein n=4 Tax=Panicoideae TaxID=147369 RepID=A0A835APB3_9POAL) HSP 1 Score: 78.2 bits (191), Expect = 8.190e-15 Identity = 59/161 (36.65%), Postives = 97/161 (60.25%), Query Frame = 1
Query: 1 MEAELRKMPPAQRRRHVDMVSQYKADLGTLRKDLDR-----AMDSVQREALLASNRSAMERKADDRAAT--ATERVKRSTARLQDASRTVAETEEIGVNVIGGLQEQRETLLRAHDKVTDVNTLTGRARSIIKAIQRRAITNKLVLGLIIFLLVICDVLLM 462
M+ E R + P+ R + + +YK+DL L+ L R A + E L + A+ AD R+ ATER ++T RL+D+ RT+ ETE++GV+++ L +QR++LLRAH+ + DV+ G++R II + RR NK ++GLII +LV+ +++M
Sbjct: 55 MDLEARNLQPSIRAGLLAKIREYKSDLNNLKGALKRITSGNAQQGAREELLESGMADALGVSADQRSRLLRATERQNQTTDRLRDSHRTMLETEDLGVSILHDLSQQRQSLLRAHNVLDDVDDNIGKSRRIIGGMVRRMDRNKWIIGLIIAVLVLAILVIM 215
BLAST of mRNA_S-firma_F_contig10831.1117.1 vs. uniprot
Match: A0A7R9Y582_9VIRI (Hypothetical protein n=1 Tax=Prasinoderma coloniale TaxID=156133 RepID=A0A7R9Y582_9VIRI) HSP 1 Score: 77.8 bits (190), Expect = 1.030e-14 Identity = 54/150 (36.00%), Postives = 86/150 (57.33%), Query Frame = 1
Query: 1 MEAELRKMPPAQRRRHVDMVSQYKADLGTLRKDLDRAM---DSVQREALLASNRSAMERKADDRAATATERVKRSTARLQDASRTVAETEEIGVNVIGGLQEQRETLLRAHDKVTDVNTLTGRARSIIKAIQRRAITNKLVLGLIIFLLV 441
M+ E R P + + + YKADL L+KD R R LL SA +++ +R T TER++RS+ R+++ RT+ ETEE+GV+++ L +QR+T+ A D + + R R +I ++ RR +TNK+++ IIFLLV
Sbjct: 55 MDLEARTTTPDTKTVLLGRLRDYKADLNGLKKDAKRMSAFAGDASRAELLGDAASASDQR--NRLLTTTERLQRSSDRIEEGKRTILETEELGVSILQDLHQQRQTITHARDTLHSTDDNLSRGRKLISSMARRMVTNKIIMWTIIFLLV 202
BLAST of mRNA_S-firma_F_contig10831.1117.1 vs. uniprot
Match: A0A425CFQ9_9STRA (Uncharacterized protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A425CFQ9_9STRA) HSP 1 Score: 76.3 bits (186), Expect = 6.490e-14 Identity = 56/154 (36.36%), Postives = 91/154 (59.09%), Query Frame = 1
Query: 1 MEAELRKMPPAQRRRHVDMVSQYKADLGTLRKDLDRAMDSVQREALLASNRSAMERKADDRAATATERVKRSTARLQDASRTVAETEEIGVNVIGGLQEQRETLLRAHDKVTDVNTLTGRARSIIKAIQRRAITNKLVLGLIIFLLV--ICDVL 456
M E+R P ++ ++ Y+ +L L +DL+RA + E ++S A ++ +R +R+ +S+ +L+D R VAET+E+G+ V+ L +QRE+LL H+KV + +T AR I++ + RR ITN LVL IIF+L+ IC VL
Sbjct: 86 MTVEMRGRAPHLKKNMQTKINLYRDELQGLIRDLERAQLMAREENTMSST--ANQKSQYERLIKNNDRLTKSSKKLEDTHRIVAETKEVGITVLNTLAQQRESLLGTHEKVRETGAMTTEARRILQRMTRRIITNTLVLYTIIFVLIAAICYVL 237
BLAST of mRNA_S-firma_F_contig10831.1117.1 vs. uniprot
Match: A0A1D1ZTS4_AUXPR (V-SNARE domain-containing protein n=2 Tax=Auxenochlorella protothecoides TaxID=3075 RepID=A0A1D1ZTS4_AUXPR) HSP 1 Score: 75.1 bits (183), Expect = 1.180e-13 Identity = 52/149 (34.90%), Postives = 86/149 (57.72%), Query Frame = 1
Query: 1 MEAELRKMPPAQRRRHVDMVSQYKADLGTLRKDLDRA-MDSVQREALLASNRSAMERKAD--DRAATATERVKRSTARLQDASRTVAETEEIGVNVIGGLQEQRETLLRAHDKVTDVNTLTGRARSIIKAIQRRAITNKLVLGLIIFLL 438
++ E R +PP R + + YKAD+ LR D A SV+ A L + A DR TAT+R+ +++ R+Q + + ETEE+G++V+G LQ QRET+L + D + V+ R+R+I+ ++ RR + NK+++ I+ LL
Sbjct: 59 LDIEARSLPPVTSRALLQKLKDYKADIAKLRSDAKTAGTSSVESRAELGLGNEYFQTSAGQRDRLLTATDRLGKTSDRIQAGRQQLLETEELGISVLGDLQRQRETILHSRDALAGVDEGISRSRAILSSMSRRIMQNKIIMWGIVALL 207
BLAST of mRNA_S-firma_F_contig10831.1117.1 vs. uniprot
Match: A0A833T0H8_PHYIN (V-SNARE family protein n=3 Tax=Phytophthora TaxID=4783 RepID=A0A833T0H8_PHYIN) HSP 1 Score: 73.6 bits (179), Expect = 4.570e-13 Identity = 55/148 (37.16%), Postives = 87/148 (58.78%), Query Frame = 1
Query: 1 MEAELRKMPPAQRRRHVDMVSQYKADLGTLRKDLDRAMDSVQREALLASNRSAMERKADDRAATATERVKRSTARLQDASRTVAETEEIGVNVIGGLQEQRETLLRAHDKVTDVNTLTGRARSIIKAIQRRAITNKLVLGLIIFLLVI 444
M E+R P R+ V+ Y+ +L L +DL+RA + RE S+ +A + +R +R+ +S+ +L+D R VAETEE+G+ V+ L QRE+LL AH+KV + +T AR I++ + RR ITN +VL IF+L++
Sbjct: 59 MTVEVRGRQPMLRKAMQAKVNMYRDELQGLIRDLERAQ-LMAREGKTTSS-TANQTSQYERLIKNNDRLAKSSKKLEDTHRIVAETEEVGITVLDTLASQRESLLGAHEKVRETGAMTTEARRILQRMTRRIITNTIVLYTTIFVLIV 204
BLAST of mRNA_S-firma_F_contig10831.1117.1 vs. uniprot
Match: A0A2V0PSN9_9CHLO (V-SNARE domain-containing protein n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0PSN9_9CHLO) HSP 1 Score: 73.6 bits (179), Expect = 4.710e-13 Identity = 51/153 (33.33%), Postives = 89/153 (58.17%), Query Frame = 1
Query: 1 MEAELRKMPPAQRRRHVDMVSQYKADLGTLRKDLDRAM------DSVQREALLASNRSAMERKADDRAATATERVKRSTARLQDASRTVAETEEIGVNVIGGLQEQRETLLRAHDKVTDVNTLTGRARSIIKAIQRRAITNKLVL-GLIIFLL 438
M+ E R +P + R V +Y+ADLG+LR+ L +A D+ + E L + + DR +TER++++T RLQ + +AETEE+GV+++G L QRET++ A D + + +AR ++ ++ +R + NK+++ G+ FLL
Sbjct: 58 MDMEARSLPADRARGLTSKVKEYRADLGSLREQLKQAAATAGASDAARAELGLGGDYYSTAAGQRDRMLVSTERLQKTTERLQLGKQQLAETEELGVSILGDLARQRETIVSARDTLHGADDNISKARRVLSSMSKRVLANKIIMFGISAFLL 210
BLAST of mRNA_S-firma_F_contig10831.1117.1 vs. uniprot
Match: W2JIH7_PHYPR (Uncharacterized protein n=6 Tax=Phytophthora parasitica TaxID=4792 RepID=W2JIH7_PHYPR) HSP 1 Score: 72.8 bits (177), Expect = 5.410e-13 Identity = 55/148 (37.16%), Postives = 87/148 (58.78%), Query Frame = 1
Query: 1 MEAELRKMPPAQRRRHVDMVSQYKADLGTLRKDLDRAMDSVQREALLASNRSAMERKADDRAATATERVKRSTARLQDASRTVAETEEIGVNVIGGLQEQRETLLRAHDKVTDVNTLTGRARSIIKAIQRRAITNKLVLGLIIFLLVI 444
M E+R P R+ V+ Y+ +L L +DL+RA + RE S+ +A + +R +R+ +S+ +L+D R VAETEE+G+ V+ L QRE+LL AH+KV + +T AR I++ + RR ITN +VL IF+L++
Sbjct: 30 MTVEVRGRQPMLRKAMQAKVNMYRDELQGLIRDLERAQ-LMAREGKATSS-TANQTSQYERLIKNNDRLTKSSKKLEDTHRIVAETEEVGIAVLDTLASQRESLLGAHEKVRETGAMTTEARRILQRMTRRIITNTIVLYTTIFVLIV 175 The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10831.1117.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-firma_F_contig10831.1117.1 >prot_S-firma_F_contig10831.1117.1 ID=prot_S-firma_F_contig10831.1117.1|Name=mRNA_S-firma_F_contig10831.1117.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=154bp MEAELRKMPPAQRRRHVDMVSQYKADLGTLRKDLDRAMDSVQREALLASNback to top mRNA from alignment at S-firma_F_contig10831:4431..4892- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-firma_F_contig10831.1117.1 ID=mRNA_S-firma_F_contig10831.1117.1|Name=mRNA_S-firma_F_contig10831.1117.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=462bp|location=Sequence derived from alignment at S-firma_F_contig10831:4431..4892- (Sphaerotrichia firma ET2_F female)back to top Coding sequence (CDS) from alignment at S-firma_F_contig10831:4431..4892- >mRNA_S-firma_F_contig10831.1117.1 ID=mRNA_S-firma_F_contig10831.1117.1|Name=mRNA_S-firma_F_contig10831.1117.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=924bp|location=Sequence derived from alignment at S-firma_F_contig10831:4431..4892- (Sphaerotrichia firma ET2_F female)back to top |